mRNA_F-serratus_M_contig79.19168.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig79.19168.1 vs. uniprot
Match: A0A6H5KI08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI08_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.980e-45 Identity = 87/112 (77.68%), Postives = 98/112 (87.50%), Query Frame = 1
Query: 130 LPLSPPPMAPLSRERFKAEATELEAALRSRENGANGARMDEGDASGHQLASARRLRSLLSSNTDELIQEALDREWVPLLMGWLGTDTRPAVQVEALWALTNIAHGATDHAQV 465
LPLSPP A L ++RFKAEA ELE+A RSR++G +G R DEGDASG QLASARRLRSLLSSN ++LI+EAL+R+WVPLLMGWLG DTRPAVQVEALWALTNIA GA DHAQV
Sbjct: 152 LPLSPP-QAALDKDRFKAEAMELESAFRSRDSGVHG-RTDEGDASGRQLASARRLRSLLSSNREDLIREALERDWVPLLMGWLGADTRPAVQVEALWALTNIAAGAPDHAQV 261
BLAST of mRNA_F-serratus_M_contig79.19168.1 vs. uniprot
Match: D8LCJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ0_ECTSI) HSP 1 Score: 138 bits (348), Expect = 4.470e-37 Identity = 76/102 (74.51%), Postives = 89/102 (87.25%), Query Frame = 1
Query: 130 LPLSPPPMAPLSRERFKAEATELEAALRSRENGANGARMDEGDASGHQLASARRLRSLLSSNTDELIQEALDREWVPLLMGWLGTDTRPAVQVEA-LWALTN 432
LPLSPP +APL ++RFKAEA ELE+A RSR++G +G R DEGDASG QLASARRLRSLLSSN ++LI+EAL+R+WVPLLMGWLG DTRPAVQVE LWA+ N
Sbjct: 205 LPLSPP-LAPLDKDRFKAEAMELESAFRSRDSGVHG-RTDEGDASGRQLASARRLRSLLSSNREDLIREALERDWVPLLMGWLGADTRPAVQVEPPLWAVAN 304
BLAST of mRNA_F-serratus_M_contig79.19168.1 vs. uniprot
Match: A0A7S2R949_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R949_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 4.560e-18 Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = 1
Query: 160 LSRERFKAEATELEAALRSRENGANGARMDEGDASGHQLASARRLRSLLSSNTDELIQEALDREWVPLLMGWLGTDTRPAVQVEALWALTNIAHGATDHAQV 465
LS+ FK E +EA L+S + ++ + + QL +AR+LR LLS+N + LIQE L+R WVPLL+GWL + PAVQVEALWALTNIA G +H V
Sbjct: 55 LSKAGFKQELEAVEAGLKSSKASSDASLAEL------QLQAARKLRQLLSTNRELLIQEVLERNWVPLLLGWLQLNHNPAVQVEALWALTNIAAGTAEHTHV 150
BLAST of mRNA_F-serratus_M_contig79.19168.1 vs. uniprot
Match: D8LKX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX1_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 1.110e-14 Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query: 157 PLSRERFKAEATELEAALRSRENGANGARMDEGDASGHQLASARRLRSLLSSNTDELIQEALDREWVPLLMGWLGTDTRPAVQVEALWALTNIAHGATDH 456
PL ++ F +EA +E L + G GA+ E G QL +A+RLR LLS+N + ++QE L R WVPLL+ WLG RP++QVEAL ALT +A T+H
Sbjct: 261 PLGQKAFSSEAAAVERGLHI-QLGDTGAKT-ESQLGGQQLEAAKRLRHLLSTNRERMVQEMLSRGWVPLLLRWLGLVHRPSLQVEALSALTTVAQTTTEH 358
BLAST of mRNA_F-serratus_M_contig79.19168.1 vs. uniprot
Match: A0A835Z8E3_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8E3_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.450e-14 Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 277 ASARRLRSLLSSNTDELIQEALDREWVPLLMGWLGTDTRPAVQVEALWALTNIAHGATDHAQV 465
A R LR LL+S+ + LI+E +DR WVPLL+GWL D P +Q++ALWALTNIA G +HAQV
Sbjct: 146 ARGRTLRDLLTSDRERLIEEVMDRNWVPLLIGWLWLDQSPGLQMDALWALTNIAAGRAEHAQV 208
BLAST of mRNA_F-serratus_M_contig79.19168.1 vs. uniprot
Match: A0A6H5JQ71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ71_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 7.030e-14 Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 157 PLSRERFKAEATELEAALRSRENGANGARMDEGDASGHQLASARRLRSLLSSNTDELIQEALDREWVPLLMGWLGTDTRPAVQVEALWALTNIAHGATDH 456
PL ++ F +EA +E L + G GA+ E G QL +A+RLR LLS+N + ++QE L R WVPLL+ WLG RP++QVEAL ALT +A +H
Sbjct: 135 PLGQKAFSSEAAAVERGLHI-QLGDTGAKT-ESQLGGQQLEAAKRLRHLLSTNRERMVQEMLSRGWVPLLLRWLGLVHRPSLQVEALSALTTVAQTTIEH 232
BLAST of mRNA_F-serratus_M_contig79.19168.1 vs. uniprot
Match: A0A5D6XQB3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQB3_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.690e-13 Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 271 QLASARRLRSLLSSNTDELIQEALDREWVPLLMGWLGTDTRPAVQVEALWALTNIAHGATDHAQV 465
QL +A++LR LLSS D LI++ LD+ W P L+ WL RP +QVEALWALTNIA GATD+ V
Sbjct: 133 QLEAAKKLRGLLSSERDLLIRQMLDKNWTPRLIKWLRLRDRPTLQVEALWALTNIAAGATDNTSV 197
BLAST of mRNA_F-serratus_M_contig79.19168.1 vs. uniprot
Match: K3WWN8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWN8_GLOUD) HSP 1 Score: 76.3 bits (186), Expect = 3.130e-13 Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 271 QLASARRLRSLLSSNTDELIQEALDREWVPLLMGWLGTDTRPAVQVEALWALTNIAHGATDHAQV 465
QL +A++LR LLSS D LI++ LD+ W P L+ WL RP +QVEALWALTNIA GATD+ V
Sbjct: 207 QLEAAKKLRVLLSSERDLLIRQMLDKNWTPRLIKWLRLRDRPTLQVEALWALTNIAAGATDNTSV 271
BLAST of mRNA_F-serratus_M_contig79.19168.1 vs. uniprot
Match: H3G600_PHYRM (Uncharacterized protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=H3G600_PHYRM) HSP 1 Score: 74.7 bits (182), Expect = 8.810e-13 Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 271 QLASARRLRSLLSSNTDELIQEALDREWVPLLMGWLGTDTRPAVQVEALWALTNIAHGATDHAQV 465
QL +A++LR LLSS D LI++ L++ W P L+ WL RP +QVEALWALTNIA GATD+ V
Sbjct: 16 QLEAAKKLRVLLSSERDLLIRQMLEKNWTPRLIKWLRLRDRPTLQVEALWALTNIAAGATDNTSV 80
BLAST of mRNA_F-serratus_M_contig79.19168.1 vs. uniprot
Match: A0A6A3UE13_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3UE13_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 9.350e-13 Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 271 QLASARRLRSLLSSNTDELIQEALDREWVPLLMGWLGTDTRPAVQVEALWALTNIAHGATDHAQV 465
QL +A++LR LLSS D LI++ L++ W P L+ WL RP +QVEALWALTNIA GATD+ V
Sbjct: 170 QLEAAKKLRVLLSSERDLLIRQMLEKNWTPRLIKWLRLRDRPTLQVEALWALTNIAAGATDNTSV 234 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig79.19168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig79.19168.1 >prot_F-serratus_M_contig79.19168.1 ID=prot_F-serratus_M_contig79.19168.1|Name=mRNA_F-serratus_M_contig79.19168.1|organism=Fucus serratus male|type=polypeptide|length=155bp AAGRGFSRGLRESRSTQGQQQQQQQKQKQHQQQQKQQHQHQQALPLSPPPback to top mRNA from alignment at F-serratus_M_contig79:532986..538061- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig79.19168.1 ID=mRNA_F-serratus_M_contig79.19168.1|Name=mRNA_F-serratus_M_contig79.19168.1|organism=Fucus serratus male|type=mRNA|length=5076bp|location=Sequence derived from alignment at F-serratus_M_contig79:532986..538061- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig79:532986..538061- >mRNA_F-serratus_M_contig79.19168.1 ID=mRNA_F-serratus_M_contig79.19168.1|Name=mRNA_F-serratus_M_contig79.19168.1|organism=Fucus serratus male|type=CDS|length=930bp|location=Sequence derived from alignment at F-serratus_M_contig79:532986..538061- (Fucus serratus male)back to top |