mRNA_F-serratus_M_contig79.19161.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig79.19161.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 195 bits (496), Expect = 1.960e-55 Identity = 106/255 (41.57%), Postives = 156/255 (61.18%), Query Frame = 1
Query: 1 EGTGHHFLETTYKNMFSANEELSADATDCLSMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALQGEALSEPGHLAALCHFISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYNLSGEEAEASRIASFVAPNNAIAAMYKEAWINIWKPRVKQEEVLPFEGADVVAARLQSKLDAFEYLYC 765
EGTGHH++ ++F N L + Y+ M + + + A +MR++A LS PG L SYP + GP KVMQY+DL M+AE AE G+D R++Y++RSA+++++ANTVHR H D+ E ++R F++YMR+L TDIAV+HSFL EI P F+VCHD++ G++ +AS IASF++PN+ IA++ + + + K + + + LPFE A V RLQ KLDAFE+LYC
Sbjct: 157 EGTGHHYVMWANASLFGDNMNLPRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANLSSPGALEFFSIPCSYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKF-HLLMGDDE---ETVGQERLFLKYMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPNDEIASLVESSLVQTAK-KSSRTDPLPFEDAYAVVLRLQRKLDAFEHLYC 406
BLAST of mRNA_F-serratus_M_contig79.19161.1 vs. uniprot
Match: D7FZI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI1_ECTSI) HSP 1 Score: 116 bits (290), Expect = 1.740e-28 Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 442 EAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYNLSGEEAEASRIASFVAPNNAIAAMYKEAWINIWKPRVKQEEVLPFEGADVVAARLQSKLDAFEYLYC 765
E E+R F+EYMR+L TDIAV+ SFL+EI P FIVCHD++ G++ +AS IA F+APN+ IA + + + + + + LPFE AD V +RLQ KLDAFE LYC
Sbjct: 6 ETVGEERLFLEYMRVLFTDIAVLQSFLSEIGPEFIVCHDWDRLGDKEQASTIAHFIAPNDEIAGLVESSLVQTARKKSSNTNPLPFEDADAVVSRLQRKLDAFEPLYC 113
BLAST of mRNA_F-serratus_M_contig79.19161.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 114 bits (285), Expect = 4.340e-26 Identity = 82/255 (32.16%), Postives = 120/255 (47.06%), Query Frame = 1
Query: 85 CLSMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALQGEALSEPGHLAAL----CHF-----ISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYNLSGEEAEASRIASFVAPNNAIAAMY------------------KEAWINIWKPRVKQEEVLPFEGADVVAARLQSKLDAFEYLYCA 768
C+ + E S+ ++ + Y + +R R +M K+A E G + C F +SYP G +K +QY+D R++AE AE GVD+R VY+ RSA DI+ +++VH + FI RILL ++AVVHS E+DPAF C Y + A+A+R+A F+APNN A K++W K E+V P + A V RLQ +LD E C+
Sbjct: 20 CVMAKVLYPELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNY-----------------GGSFIRESRILLNNLAVVHSTFQELDPAFTTCFRYGEMADPAQAARVAGFLAPNNRTAEKLADQMLSHVKIKSPPESGNKQSWGEGGKRLRHPEDVDPPKAA--VVTRLQQRLDMVEKDVCS 255
BLAST of mRNA_F-serratus_M_contig79.19161.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 114 bits (285), Expect = 3.570e-25 Identity = 72/219 (32.88%), Postives = 111/219 (50.68%), Query Frame = 1
Query: 1 EGTGHHFLETTYKNMFSANEELSADATDCLSMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALQGEALSEPGHLAAL----CHF-----ISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYNLSGEEAEASRIASFVAPNNAIA 630
EGTGHH++ +++ ++ C+ + E S+ K+ + Y + +R R +M K+A E G + C F +SYP G +K +QY+D R++AE AE GVD+R VY+ RSA DI+ +++ H + FI RILL ++AVVHS E+DP+F C Y + A+A+R+A F+APNN A
Sbjct: 117 EGTGHHYMADVLEDVCKKDKVRCPKL--CVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNY-----------------GGSFIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPNNHTA 316
BLAST of mRNA_F-serratus_M_contig79.19161.1 vs. uniprot
Match: D7G1E6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 3.250e-21 Identity = 52/122 (42.62%), Postives = 77/122 (63.11%), Query Frame = 1
Query: 43 MFSANEELSADATDCLSMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALQGEALSEPGHLAALCHFISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQ 408
MF A+ +L + +F +M +++ + ++ R MR +A + + L PG + + ISYP GPQKV QY+DLR+LAE AEAEGVDLR++YMKRSA++++LA+TVHR Q
Sbjct: 1 MFKAHPDLVRFDEKLPNFWKFFISTTMRTSSTAFTASWQQGRDQMRDLAQRAQTLPTPGTVQLITGGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGFQ 122
BLAST of mRNA_F-serratus_M_contig79.19161.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 2.200e-18 Identity = 72/237 (30.38%), Postives = 108/237 (45.57%), Query Frame = 1
Query: 1 EGTGHHFLETTYKNMFSANEELSADATDCLSMLPYFTEYSMVKTTSHYAEGAERARRDMRK-----MALQGEALSEPGHLAALCHFI---------SYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYNLSGEEAEASRIASFVAPNNAIAAMYKEAWINIWKP 669
EGTGHH+ + N+F ++ + A C + P T + ERARR++R+ A E ++E AA+ F+ S+P G K +QY+D R+LAE AE GVD+R VY+ RSAR I++++T H H T F+ R L+ + AVV S E+ P F C Y + + R+A F+AP+ A + + KP
Sbjct: 76 EGTGHHY----FLNVF--DDACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQ--AAIAQFVTCRSKSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYGGT-----------------FMRESRALINNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPDEDTAQRLEGKMLENVKP 287
BLAST of mRNA_F-serratus_M_contig79.19161.1 vs. uniprot
Match: A0A7S0A0K6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO) HSP 1 Score: 58.9 bits (141), Expect = 4.850e-6 Identity = 36/110 (32.73%), Postives = 57/110 (51.82%), Query Frame = 1
Query: 235 CHFISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPRDKNPPEAPSEDRQFIEYMRILLTDIAVVHSFLAEIDPAFIVCHDYN 564
C +SYP G K+ Q D+R+LAE+AE EGVD R++ + R A ++ + T+HRH N EA +L + + + L +DPAF++C +Y+
Sbjct: 215 CGMMSYPNFPGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPAAAVLRSTTIHRHFGSWNT-------EAV-----------VLEHNAQTLLAQLQSLDPAFVLCTEYD 306
BLAST of mRNA_F-serratus_M_contig79.19161.1 vs. uniprot
Match: A0A7S3W283_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W283_9SPIT) HSP 1 Score: 56.6 bits (135), Expect = 1.210e-5 Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = 1
Query: 1 EGTGHHFLETTYKNMFSANEELSADATDCLSML---PYFTEYSMVKTTSHYAEGAERARRDM-RKMALQGEALSEPGHLA----ALCHFISYPTDYGPQKVMQYLDLRMLAEVAEAEGVDLRLVYMKRSARDIILANTVHRHIQHTNNPR 426
EGTGHH A L A+A+D LS L + S++ + A+ + + ++ + ++ P L AL +SYP G M + DLR+LAE+AE GVDLR++ R A D++++ +H ++ PR
Sbjct: 81 EGTGHHLWHAMLAGS-CARSNLCANASDTLSDLIADKLHRKKSIMFSERASGRDAQLVEQKLVERLKIAARTVTSPTSLIIQNNALGGQMSYPDSVGTDVQMHHPDLRLLAELAEIAGVDLRVLLSMRGATDVLISTMIHHPFRNQKGPR 229 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig79.19161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig79.19161.1 >prot_F-serratus_M_contig79.19161.1 ID=prot_F-serratus_M_contig79.19161.1|Name=mRNA_F-serratus_M_contig79.19161.1|organism=Fucus serratus male|type=polypeptide|length=243bp MFSANEELSADATDCLSMLPYFTEYSMVKTTSHYAEGAERARRDMRKMALback to top mRNA from alignment at F-serratus_M_contig79:279275..280826- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig79.19161.1 ID=mRNA_F-serratus_M_contig79.19161.1|Name=mRNA_F-serratus_M_contig79.19161.1|organism=Fucus serratus male|type=mRNA|length=1552bp|location=Sequence derived from alignment at F-serratus_M_contig79:279275..280826- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig79:279275..280826- >mRNA_F-serratus_M_contig79.19161.1 ID=mRNA_F-serratus_M_contig79.19161.1|Name=mRNA_F-serratus_M_contig79.19161.1|organism=Fucus serratus male|type=CDS|length=1458bp|location=Sequence derived from alignment at F-serratus_M_contig79:279275..280826- (Fucus serratus male)back to top |