mRNA_F-serratus_M_contig78.19054.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig78.19054.1 vs. uniprot
Match: D8LEJ8_ECTSI (Glycerol kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEJ8_ECTSI) HSP 1 Score: 251 bits (641), Expect = 3.740e-76 Identity = 133/258 (51.55%), Postives = 174/258 (67.44%), Query Frame = 3
Query: 3 TGQPLHPVMVGRDSRLIPMCSELELHGGVDRYRNITGVLISCDSPAVKLLWLLDNVPGLREAAERGDALFGTLDSWLVWKLTNGLRHVTDITNASSTMLMSLEKLQWDDGILNELRIPLSMLPKIVSSSELVCPANNPDGLLNGVPISGIICDRQAALLAEKFCGGHKHDTCLYDREAHTIMLETKDQIVLSRHPRLQTTVAFKLGHRHCVYAIEGTMVKVSSSMRWRMGDLWTMPLLRNNEWLASTVDDNGGVYLVP 776
TG PLHP++V D R +C +L+ +GG DR+R TG+ IS A KL+WLLDNV GLRE AE+GDALFGT+DSWL+WKLT G H+TD+TNAS T LMSLE L WD IL EL IP MLP IVSSSE+ C A+NPD +LNGV ++GI+ D+QAAL + C C Y + I++ T +++V S + L +TV FKLG + CVYA+EG++ S+++W +L + E LA TV+DNGGV+ VP
Sbjct: 121 TGTPLHPLIVWNDVRTESICRDLKANGGADRFRGRTGLPISPYFSATKLMWLLDNVAGLRELAEKGDALFGTMDSWLMWKLTGGRMHITDVTNASRTNLMSLEGLHWDKSILQELGIPACMLPSIVSSSEVYCVADNPDNVLNGVRVAGILGDQQAALFGQ-ICFREGQTKCTYGTGSF-ILMNTGERVVPSTNGLL-STVGFKLGEQACVYALEGSIAYAGSTVQWLRDNLEMIKSASEIEALARTVEDNGGVFFVP 375
BLAST of mRNA_F-serratus_M_contig78.19054.1 vs. uniprot
Match: UPI001E472A11 (glycerol kinase GlpK n=1 Tax=Actinocorallia sp. API 0066 TaxID=2896846 RepID=UPI001E472A11) HSP 1 Score: 207 bits (528), Expect = 2.320e-60 Identity = 114/258 (44.19%), Postives = 160/258 (62.02%), Query Frame = 3
Query: 3 TGQPLHPVMVGRDSRLIPMCSELELHGGVDRYRNITGVLISCDSPAVKLLWLLDNVPGLREAAERGDALFGTLDSWLVWKLTNGLRHVTDITNASSTMLMSLEKLQWDDGILNELRIPLSMLPKIVSSSELVCPANNPDGLLNGVPISGIICDRQAALLAEKFCGGHKHDTCLYDREAHTIMLETKDQIVLSRHPRLQTTVAFKLGHRHCVYAIEGTMVKVSSSMRWRMGDLWTMPLLRNNEWLASTVDDNGGVYLVP 776
TG+P+H +V +D+R +C++L GG DR+ TG+ ++ K+ WLL++VPG+RE AE G+ LFGT+D+WL+W LT G HVTD+TNAS T+LM L L WDDG+L L IP S+LP+I SS+E+ A G+L GVPI+ + D+QAAL + C G Y + ++L T D+ V SRH L TTV ++LG VYA+EG++ S +W + + E LA TV+DNGG+YLVP
Sbjct: 93 TGRPVHHALVWQDTRTEALCADLAADGGRDRFAETTGLPVASYFSGPKIAWLLEHVPGVRERAEAGELLFGTIDTWLIWNLTGGAAHVTDVTNASRTLLMDLRTLDWDDGVLAALDIPRSLLPEIRSSAEVYGTAR---GVLEGVPIAAALGDQQAALFGQT-CFGVGDAKSTYGTGSF-LLLNTGDEPVRSRHGLL-TTVGYQLGSDRPVYALEGSIANTGSLTQWLRDRIGLISTAAEIETLALTVEDNGGLYLVP 344
BLAST of mRNA_F-serratus_M_contig78.19054.1 vs. uniprot
Match: A0A3N9VLI6_9GAMM (Glycerol kinase n=1 Tax=Methylococcus sp. TaxID=39769 RepID=A0A3N9VLI6_9GAMM) HSP 1 Score: 204 bits (518), Expect = 5.850e-59 Identity = 120/259 (46.33%), Postives = 163/259 (62.93%), Query Frame = 3
Query: 3 TGQPLHPVMVGRDSRLIPMCSELELHGGVDRYRNITGVLISCDSPAVKLLWLLDNVPGLREAAERGDALFGTLDSWLVWKLTNGLRHVTDITNASSTMLMSLEKLQWDDGILNELRIPLSMLPKIVSSSELVCPANNPDGLLNGVPISGIICDRQAALLAEK-FCGGHKHDTCLYDREAHTIMLETKDQIVLSRHPRLQTTVAFKLGHRHCVYAIEGTMVKVSSSMRWRMGDLWTMPLLRNNEWLASTVDDNGGVYLVP 776
TGQP+HP +V +D+R +C L G D R TG+ IS KL WLLD +PG RE AERG+ LFGTLD+WL+W LT G+ HVTD +NAS T+LM+LE L WDD +L + IP +MLP+I SSSE+ PA GLL+GVP++G + D+QAAL + F G +T Y ++L T ++ S H L +TVA++LG VYA+EG++ + ++W +L + E LA+TVDDNGG+YLVP
Sbjct: 92 TGQPIHPAIVWQDTRTDRLCHRLSAMAGQDGLRARTGLPISTYFSGPKLQWLLDQIPGARERAERGELLFGTLDTWLIWNLTGGI-HVTDPSNASRTLLMNLETLDWDDDLLGLMDIPRAMLPRIRSSSEVYGPAR---GLLDGVPVAGTLGDQQAALFGQTCFDVGDAKNT--YGTGCF-MLLNTGNERRPSSHGLL-STVAYQLGTEQPVYALEGSIAVAGALVQWLRDNLGLIRTAPEVETLANTVDDNGGIYLVP 342
BLAST of mRNA_F-serratus_M_contig78.19054.1 vs. uniprot
Match: A0A399HI41_9ACTN (Glycerol kinase n=2 Tax=Streptomyces sp. YIM 130001 TaxID=2259644 RepID=A0A399HI41_9ACTN) HSP 1 Score: 204 bits (518), Expect = 9.150e-59 Identity = 114/267 (42.70%), Postives = 163/267 (61.05%), Query Frame = 3
Query: 3 TGQPLHPVMVGRDSRLIPMCSELELHGGVDRYRNITGVLISCDSPAVKLLWLLDNVPGLREAAERGDALFGTLDSWLVWKLT---NGLRHVTDITNASSTMLMSLEKLQWDDGILNELRIPLSMLPKIVSSSELVCPANNPDGLLNGVPISGIICDRQAALLAEKFCGGHKHDTCLYDREAH------TIMLETKDQIVLSRHPRLQTTVAFKLGHRHCVYAIEGTMVKVSSSMRWRMGDLWTMPLLRNNEWLASTVDDNGGVYLVP 776
TG+P+H +V +D+R +C EL + G DR+R TG+ ++ K+ WLLDNV GLRE AERGD LFGT+DSW++W LT NG +HVTD+TNAS TMLM+L +QWDD IL + IP ++LP+I SS+E+ A G+L+GVP++ + D+QAAL + TC + EA T ML + ++ + L TTV +++G + VYA+EG++ S ++W + + E LAS+VDDNGG Y VP
Sbjct: 107 TGEPVHNAIVWQDTRTDALCKELGRNVGQDRFRRETGLPLASYFAGPKVRWLLDNVEGLRERAERGDILFGTMDSWVIWNLTGGTNGGQHVTDVTNASRTMLMNLHSMQWDDKILASIGIPAAVLPEIRSSAEVYGSAKG--GVLDGVPVASALGDQQAALFGQ---------TCFAEGEAKSTYGTGTFMLLNTGETPVNSYNGLITTVGYRIGDQKPVYALEGSIAVTGSLVQWMRDQMGLINSAAEIETLASSVDDNGGAYFVP 362
BLAST of mRNA_F-serratus_M_contig78.19054.1 vs. uniprot
Match: UPI001F3258A5 (glycerol kinase GlpK n=1 Tax=Gordonia zhaorongruii TaxID=2597659 RepID=UPI001F3258A5) HSP 1 Score: 202 bits (515), Expect = 1.190e-58 Identity = 117/268 (43.66%), Postives = 158/268 (58.96%), Query Frame = 3
Query: 3 TGQPLHPVMVGRDSRLIPMCSELELHGGVDRYRNITGVLISCDSPAVKLLWLLDNVPGLREAAERGDALFGTLDSWLVWKLTNGLR---HVTDITNASSTMLMSLEKLQWDDGILNELRIPLSMLPKIVSSSELVCPANNPDGLLNGVPISGIICDRQAALLAEKFCGGHKHDTCLYDREAHT-------IMLETKDQIVLSRHPRLQTTVAFKLGHRHCVYAIEGTMVKVSSSMRWRMGDLWTMPLLRNNEWLASTVDDNGGVYLVP 776
TG+P+H +V +D+R +C EL G DRYR TG+ +S K+ WLLDNV G+RE AERG+ FGT+D+WL W +T G+ HVTD+TNAS TMLM LE LQWD I E+ IP S+LP+I SSSE++ P +G L GVP++GI+ D+QAA+ + CL EA +++ T + V S H L TTV ++LG YA+EG++ S ++W +L + E LA VDDNGGVY VP
Sbjct: 75 TGEPVHNAIVWQDTRTAALCEELAGDAGPDRYRRQTGLPLSTYFAGPKIRWLLDNVDGVRERAERGELCFGTMDTWLAWNMTGGIEGGLHVTDVTNASRTMLMDLETLQWDAKICEEIGIPESLLPEIRSSSEVLSPLRQ-EGALPGVPLAGILGDQQAAMFGQ---------ACLDPGEAKNTYGTGNFLLINTGTEPVHSEHGLL-TTVCYRLGDEDARYALEGSIAVTGSLVQWLRDNLGLISDAAEVENLARAVDDNGGVYFVP 331
BLAST of mRNA_F-serratus_M_contig78.19054.1 vs. uniprot
Match: A0A7K0BYL8_9ACTN (Glycerol kinase n=1 Tax=Actinomadura macrotermitis TaxID=2585200 RepID=A0A7K0BYL8_9ACTN) HSP 1 Score: 203 bits (516), Expect = 1.370e-58 Identity = 117/259 (45.17%), Postives = 159/259 (61.39%), Query Frame = 3
Query: 3 TGQPLHPVMVGRDSRLIPMCSELELHGGVDRYRNITGVLISCDSPAVKLLWLLDNVPGLREAAERGDALFGTLDSWLVWKLTNGLRHVTDITNASSTMLMSLEKLQWDDGILNELRIPLSMLPKIVSSSELVCPANNPDGLLNGVPISGIICDRQAALLAEK-FCGGHKHDTCLYDREAHTIMLETKDQIVLSRHPRLQTTVAFKLGHRHCVYAIEGTMVKVSSSMRWRMGDLWTMPLLRNNEWLASTVDDNGGVYLVP 776
TG+P+H +V +D+R P+C+EL G DR+ TG+ ++ K+ WLLD+VPG RE AERG+ LFGTLD+W++W LT G HVTD+TNAS T+LM+L L WD+G L+ + +P +MLP+I SS+E+ A G+L GVPI+ + D+QAAL + F G T Y A +ML T + V S H L TTV F+LG VYA+EG++ S RW L + E LA +V DNGG+YLVP
Sbjct: 93 TGRPVHNALVWQDTRTEPLCAELAAGPGRDRFARDTGLPLASYFSGPKIRWLLDHVPGARERAERGELLFGTLDTWIIWNLTGGAVHVTDVTNASRTLLMNLRTLDWDEGALSAMGVPRAMLPEIRSSAEVYGRAC---GVLEGVPITAALGDQQAALFGQACFSAGEAKST--YGTGAF-LMLNTGREPVPSAHGLL-TTVGFRLGGEPAVYALEGSIANTGSLTRWLRDGLGVIGGAAEIETLARSVPDNGGLYLVP 344
BLAST of mRNA_F-serratus_M_contig78.19054.1 vs. uniprot
Match: A0A1A9QRV0_STRA9 (Glycerol kinase n=20 Tax=Streptomyces TaxID=1883 RepID=A0A1A9QRV0_STRA9) HSP 1 Score: 202 bits (514), Expect = 2.940e-58 Identity = 111/268 (41.42%), Postives = 166/268 (61.94%), Query Frame = 3
Query: 3 TGQPLHPVMVGRDSRLIPMCSELELHGGVDRYRNITGVLISCDSPAVKLLWLLDNVPGLREAAERGDALFGTLDSWLVWKLTNGL---RHVTDITNASSTMLMSLEKLQWDDGILNELRIPLSMLPKIVSSSELVCPANNPDGLLNGVPISGIICDRQAALLAEKFCGGHKHDTCLYDREAHT-------IMLETKDQIVLSRHPRLQTTVAFKLGHRHCVYAIEGTMVKVSSSMRWRMGDLWTMPLLRNNEWLASTVDDNGGVYLVP 776
TG+P+H +V +D+R +C EL + G DR+R TG+ ++ K+ W+LDNV GLRE AERGD LFGT+DSW++W LT G+ RHVTD+TNAS TMLM+L ++WDD I + +PL++LP+I SS+E+ G+L+GVP++ + D+QAAL + TC + EA + ++L T ++I+ S + L TTV +K+G + VYA+EG++ S ++W + + E LAS+V+DNGG Y VP
Sbjct: 98 TGEPVHNAIVWQDTRTDALCRELGRNVGQDRFRRETGLPLASYFAGPKIRWMLDNVEGLRERAERGDILFGTMDSWVIWNLTGGVDGGRHVTDVTNASRTMLMNLHNMEWDDKIAQSMEVPLTVLPEIRSSAEVYGHVKG--GVLDGVPVASALGDQQAALFGQ---------TCFSEGEAKSTYGTGTFLLLNTGEKIINS-YSGLITTVGYKIGDQAPVYALEGSIAVTGSLVQWMRDQMGLINSAAEIETLASSVEDNGGAYFVP 353
BLAST of mRNA_F-serratus_M_contig78.19054.1 vs. uniprot
Match: UPI0005647201 (glycerol kinase GlpK n=1 Tax=Streptacidiphilus oryzae TaxID=348818 RepID=UPI0005647201) HSP 1 Score: 202 bits (514), Expect = 3.070e-58 Identity = 115/268 (42.91%), Postives = 166/268 (61.94%), Query Frame = 3
Query: 3 TGQPLHPVMVGRDSRLIPMCSELELHGGVDRYRNITGVLISCDSPAVKLLWLLDNVPGLREAAERGDALFGTLDSWLVWKLT---NGLRHVTDITNASSTMLMSLEKLQWDDGILNELRIPLSMLPKIVSSSELVCPANNPDGLLNGVPISGIICDRQAALLAEKFCGGHKHDTCLYDREAHT-------IMLETKDQIVLSRHPRLQTTVAFKLGHRHCVYAIEGTMVKVSSSMRWRMGDLWTMPLLRNNEWLASTVDDNGGVYLVP 776
TG+P+H +V +D+R +C EL + G DR+R TG+ +S K+ WLLDNV GLRE AERG+ LFGT+D+W++W LT NG RHVTD+TNAS TMLM+L LQWD IL +++P ++LP+I SS+E+ A G L GVP++ + D+QAAL + TC + EA + ++L T +++V S + L TTV +++G + VYA+EG++ S ++W L + E LASTV+DNGG Y+VP
Sbjct: 97 TGEPVHNAIVWQDTRTEGLCKELGRNVGQDRFRRETGLPLSSYFAGPKIRWLLDNVEGLRERAERGEILFGTMDTWVIWNLTGGVNGGRHVTDVTNASRTMLMNLHTLQWDPKILESMKVPATVLPEIRSSAEVYGTAV---GDLEGVPVASALGDQQAALFGQ---------TCFSEGEAKSTYGTGTFLLLNTGERLVNS-YQGLLTTVGYRIGEQKPVYALEGSIAVTGSLVQWFRDQLGIISTAAEIETLASTVEDNGGAYIVP 351
BLAST of mRNA_F-serratus_M_contig78.19054.1 vs. uniprot
Match: UPI0007815405 (glycerol kinase GlpK n=1 Tax=Demequina soli TaxID=1638987 RepID=UPI0007815405) HSP 1 Score: 201 bits (512), Expect = 5.110e-58 Identity = 117/259 (45.17%), Postives = 162/259 (62.55%), Query Frame = 3
Query: 3 TGQPLHPVMVGRDSRLIPMCSELELHGGVDRYRNITGVLISCDSPAVKLLWLLDNVPGLREAAERGDALFGTLDSWLVWKLTNGLRHVTDITNASSTMLMSLEKLQWDDGILNELRIPLSMLPKIVSSSELVCPANNPDGLLNGVPISGIICDRQAALLAEK-FCGGHKHDTCLYDREAHTIMLETKDQIVLSRHPRLQTTVAFKLGHRHCVYAIEGTMVKVSSSMRWRMGDLWTMPLLRNNEWLASTVDDNGGVYLVP 776
TG+P+HP +V +D+R PM L GGVDR+R+ITG+ ++ A K+ W+LD+VPG R+AAE G+ FGT D+WL WKLT+G HVTD+TNAS T+LM L L+W D +LN L IP ++LP+I SSSE+ LL VPI+GII D+QAA + F G T Y A +++ T + V S H L TTVA++LG YA+EG++ + ++W + T+ + E LA+TV DNGG Y+VP
Sbjct: 92 TGEPIHPAIVWQDTRTQPMVDALAHDGGVDRFRDITGLPLATYFSATKIAWILDHVPGARDAAESGELAFGTPDTWLAWKLTDGAVHVTDVTNASRTLLMDLRTLEWSDEMLNMLNIPRALLPEIRSSSEVYGHVGG-HSLLREVPIAGIIGDQQAATFGQAAFHEGESKGT--YGTGAF-LLVNTGYEPVRSDHGLL-TTVAYQLGGGRPHYALEGSIAVTGALVQWLRDNFGTIQEAGDIEALAATVPDNGGAYIVP 345
BLAST of mRNA_F-serratus_M_contig78.19054.1 vs. uniprot
Match: A0A1H7UFH3_STRJI (Glycerol kinase n=22 Tax=Streptomycetaceae TaxID=2062 RepID=A0A1H7UFH3_STRJI) HSP 1 Score: 201 bits (512), Expect = 5.930e-58 Identity = 115/268 (42.91%), Postives = 165/268 (61.57%), Query Frame = 3
Query: 3 TGQPLHPVMVGRDSRLIPMCSELELHGGVDRYRNITGVLISCDSPAVKLLWLLDNVPGLREAAERGDALFGTLDSWLVWKLTNGL---RHVTDITNASSTMLMSLEKLQWDDGILNELRIPLSMLPKIVSSSELVCPANNPDGLLNGVPISGIICDRQAALLAEKFCGGHKHDTCLYDREAHT-------IMLETKDQIVLSRHPRLQTTVAFKLGHRHCVYAIEGTMVKVSSSMRWRMGDLWTMPLLRNNEWLASTVDDNGGVYLVP 776
TG+P+H +V +D+R +C EL + G DR+R TG+ ++ K+ WLLDNV GLRE AERG+ LFGT+D+W++W LT G+ +HVTD+TNAS TMLM+L LQWD+ I + +PLS+LP+I SS+E+ A G L GVP++ + D+QAAL + TC EA + ++L T ++IV S H L TTV +++G + VYA+EG++ S ++W L + E LASTV+DNGG Y+VP
Sbjct: 96 TGKPVHNALVWQDTRTEELCKELGRNVGQDRFRRETGLPLASYFAGPKIRWLLDNVEGLRERAERGEILFGTMDTWVIWNLTGGVDGGKHVTDVTNASRTMLMNLHTLQWDESIAQSMDVPLSVLPEIRSSAEIYGEAV---GELAGVPVASALGDQQAALFGQ---------TCFDIGEAKSTYGTGTFLLLNTGEKIVNSYHGLL-TTVGYRIGDQAPVYALEGSIAVTGSLVQWLRDQLGIISTAAEIETLASTVEDNGGAYIVP 350 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig78.19054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig78.19054.1 >prot_F-serratus_M_contig78.19054.1 ID=prot_F-serratus_M_contig78.19054.1|Name=mRNA_F-serratus_M_contig78.19054.1|organism=Fucus serratus male|type=polypeptide|length=256bp MVGRDSRLIPMCSELELHGGVDRYRNITGVLISCDSPAVKLLWLLDNVPGback to top mRNA from alignment at F-serratus_M_contig78:764381..768294- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig78.19054.1 ID=mRNA_F-serratus_M_contig78.19054.1|Name=mRNA_F-serratus_M_contig78.19054.1|organism=Fucus serratus male|type=mRNA|length=3914bp|location=Sequence derived from alignment at F-serratus_M_contig78:764381..768294- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig78:764381..768294- >mRNA_F-serratus_M_contig78.19054.1 ID=mRNA_F-serratus_M_contig78.19054.1|Name=mRNA_F-serratus_M_contig78.19054.1|organism=Fucus serratus male|type=CDS|length=1536bp|location=Sequence derived from alignment at F-serratus_M_contig78:764381..768294- (Fucus serratus male)back to top |