mRNA_F-serratus_M_contig77.18957.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig77.18957.1 vs. uniprot
Match: A0A6H5L4Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q8_9PHAE) HSP 1 Score: 133 bits (334), Expect = 1.620e-34 Identity = 63/104 (60.58%), Postives = 79/104 (75.96%), Query Frame = 1
Query: 1 HLGIVDDKDKAGYFTGMLSSAFMVGRFVTSYFWGWFADRYGRRIVILIGLWTTVVLSIAFGVSRAFWWAFLSRFLIGALNGIITVSKTLVSEVCGKEHEIVGMG 312
HLG+ DDKD+AGY+ G L+SAFMVGRF ADRYGR V+ IGL + VLS+AFG+S AFWWA RFL+GA+NG+I +SK ++SE+CGK+HE VGMG
Sbjct: 69 HLGVTDDKDEAGYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHEKVGMG 172
BLAST of mRNA_F-serratus_M_contig77.18957.1 vs. uniprot
Match: D8LRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH7_ECTSI) HSP 1 Score: 134 bits (336), Expect = 2.600e-34 Identity = 63/104 (60.58%), Postives = 79/104 (75.96%), Query Frame = 1
Query: 1 HLGIVDDKDKAGYFTGMLSSAFMVGRFVTSYFWGWFADRYGRRIVILIGLWTTVVLSIAFGVSRAFWWAFLSRFLIGALNGIITVSKTLVSEVCGKEHEIVGMG 312
HLG+ DDKD+AGY+ G L+SAFMVGRF ADRYGR V+ IGL + VLS+AFG+S AFWWA RFL+GA+NG+I +SK ++SE+CGK+HE VGMG
Sbjct: 37 HLGVADDKDEAGYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHETVGMG 140
BLAST of mRNA_F-serratus_M_contig77.18957.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI) HSP 1 Score: 133 bits (335), Expect = 3.290e-34 Identity = 65/103 (63.11%), Postives = 79/103 (76.70%), Query Frame = 1
Query: 1 HLGIVDDKDKAGYFTGMLSSAFMVGRFVTSYFWGWFADRYGRRIVILIGLWTTVVLSIAFGVSRAFWWAFLSRFLIGALNGIITVSKTLVSEVCGKEHEIVGM 309
HLG+ DDKD+AGY+ G +SSAFMVGR +SYFWG FAD +GR VI GL + VVLSIAFG+S +F WA RFL+G LNG++ +SK + SEVCGKEHE GM
Sbjct: 58 HLGVTDDKDEAGYYAGYVSSAFMVGRVGSSYFWGRFADSHGRLPVIYAGLTSMVVLSIAFGLSTSFLWALGCRFLLGVLNGLLGISKAMTSEVCGKEHEATGM 160
BLAST of mRNA_F-serratus_M_contig77.18957.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE) HSP 1 Score: 133 bits (334), Expect = 4.860e-34 Identity = 62/104 (59.62%), Postives = 80/104 (76.92%), Query Frame = 1
Query: 1 HLGIVDDKDKAGYFTGMLSSAFMVGRFVTSYFWGWFADRYGRRIVILIGLWTTVVLSIAFGVSRAFWWAFLSRFLIGALNGIITVSKTLVSEVCGKEHEIVGMG 312
HLG+ DD+D+AGY+ G L+SAFMVGRF TS ADRYGR V+ IGL + VLS+AFG+S AFWWA RFL+GA+N ++ +SK ++SE+CGK+HE VGMG
Sbjct: 105 HLGVTDDRDEAGYYAGCLASAFMVGRFATSXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNALMGISKCMISEICGKQHETVGMG 208
BLAST of mRNA_F-serratus_M_contig77.18957.1 vs. uniprot
Match: D8LFV5_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV5_ECTSI) HSP 1 Score: 116 bits (291), Expect = 1.120e-31 Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 1
Query: 31 AGYFTGMLSSAFMVGRFVTSYFWGWFADRYGRRIVILIGLWTTVVLSIAFGVSRAFWWAFLSRFLIGALNGIITVSKTLVSEVCGKEHEIVGMGA 315
+GYF G+LSS+FM GR +++YFWG ADR GRR V+L+ L +T L++AFG S F WA RFL+G LNG+ + TLVSE+CGKEHE+VG+GA
Sbjct: 3 SGYFAGLLSSSFMFGRVISAYFWGIVADRCGRRPVVLLSLASTGGLAVAFGFSTTFLWALACRFLLGLLNGMTVIFPTLVSEICGKEHEVVGLGA 97
BLAST of mRNA_F-serratus_M_contig77.18957.1 vs. uniprot
Match: A0A6H5JZQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ3_9PHAE) HSP 1 Score: 117 bits (293), Expect = 7.000e-29 Identity = 55/95 (57.89%), Postives = 73/95 (76.84%), Query Frame = 1
Query: 31 AGYFTGMLSSAFMVGRFVTSYFWGWFADRYGRRIVILIGLWTTVVLSIAFGVSRAFWWAFLSRFLIGALNGIITVSKTLVSEVCGKEHEIVGMGA 315
+GYF G+LSS+FMVGR +++YFWG ADR GRR V+L+ L +T L++AFG S F WA RFL+G LNG+ + +LVSE+CGKEHE+VG+GA
Sbjct: 3 SGYFAGLLSSSFMVGRVISAYFWGIIADRCGRRPVVLLSLASTGGLAVAFGFSTTFLWALACRFLLGLLNGMTVIFPSLVSEICGKEHEVVGLGA 97
BLAST of mRNA_F-serratus_M_contig77.18957.1 vs. uniprot
Match: A0A7R9UB92_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB92_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.250e-26 Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 1
Query: 4 LGIVDDKDKAGYFTGMLSSAFMVGRFVTSYFWGWFADRYGRRIVILIGLWTTVVLSIAFGVSRAFWWAFLSRFLIGALNGIITVSKTLVSEVCGKEHEIVGMG 312
+G DD DKAGY+ G + +AFM GR V+S+FWG +ADRYGR+ VILIG + VLS+ FGVS F A ++RFLIG NGI SKT+V+E+C ++ + MG
Sbjct: 59 IGATDDVDKAGYYAGFVGAAFMAGRTVSSFFWGIYADRYGRKPVILIGCASIAVLSVLFGVSTTFSMALVTRFLIGLGNGIAGTSKTIVAELCSEDFQPRAMG 161
BLAST of mRNA_F-serratus_M_contig77.18957.1 vs. uniprot
Match: A0A835Z5M2_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5M2_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.870e-24 Identity = 48/93 (51.61%), Postives = 65/93 (69.89%), Query Frame = 1
Query: 34 GYFTGMLSSAFMVGRFVTSYFWGWFADRYGRRIVILIGLWTTVVLSIAFGVSRAFWWAFLSRFLIGALNGIITVSKTLVSEVCGKEHEIVGMG 312
GY+ G ++ AFM+GRF +SY WG F+D+YGR+ +LIG + V S+ FG+S W A L R L+GALNG ++ K VSE+CGK HE+ GMG
Sbjct: 4 GYYAGFIAGAFMLGRFASSYPWGRFSDKYGRKPALLIGAASVCVFSLGFGLSTELWVAVLMRLLLGALNGTVSTCKVCVSEICGKAHEVKGMG 96
BLAST of mRNA_F-serratus_M_contig77.18957.1 vs. uniprot
Match: A0A7J7N9H9_9MAGN (MFS domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7N9H9_9MAGN) HSP 1 Score: 104 bits (260), Expect = 5.840e-24 Identity = 47/100 (47.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 10 IVDDKDKAGYFTGMLSSAFMVGRFVTSYFWGWFADRYGRRIVILIGLWTTVVLSIAFGVSRAFWWAFLSRFLIGALNGIITVSKTLVSEVCGKEHEIVGM 309
I ++ GY+ G + S+FM GRF+TSYFWG ADRYGR+ V++ G +T VV + FG+S +W A +RFL+G+LNG++ K SE+C +EH+ +GM
Sbjct: 813 IAKREEDIGYYAGYVGSSFMFGRFLTSYFWGVVADRYGRKPVVMFGTFTVVVFNTLFGLSTNYWMALCTRFLLGSLNGLLGPIKAYASEICREEHQALGM 912
BLAST of mRNA_F-serratus_M_contig77.18957.1 vs. uniprot
Match: A0A812N2C8_9DINO (ZIFL2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812N2C8_9DINO) HSP 1 Score: 103 bits (258), Expect = 9.300e-24 Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 4 LGIVDDKDKAGYFTGMLSSAFMVGRFVTSYFWGWFADRYGRRIVILIGLWTTVVLSIAFGVSRAFWWAFLSRFLIGALNGIITVSKTLVSEVCGKEHEIVGM 309
L + DK + GY+ G + +AFM GR TSY WGWF+DRYGR+ V++IG+ VV SI FG S F WA RF+ G NGI+ KT+VSE+C + + GM
Sbjct: 22 LDLTHDKRELGYYAGYIGAAFMAGRLCTSYGWGWFSDRYGRKPVMVIGITAMVVFSIGFGCSFNFAWALAMRFMTGFWNGIVGTGKTMVSEICTDKQQPRGM 123 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig77.18957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig77.18957.1 >prot_F-serratus_M_contig77.18957.1 ID=prot_F-serratus_M_contig77.18957.1|Name=mRNA_F-serratus_M_contig77.18957.1|organism=Fucus serratus male|type=polypeptide|length=105bp HLGIVDDKDKAGYFTGMLSSAFMVGRFVTSYFWGWFADRYGRRIVILIGLback to top mRNA from alignment at F-serratus_M_contig77:702485..703338- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig77.18957.1 ID=mRNA_F-serratus_M_contig77.18957.1|Name=mRNA_F-serratus_M_contig77.18957.1|organism=Fucus serratus male|type=mRNA|length=854bp|location=Sequence derived from alignment at F-serratus_M_contig77:702485..703338- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig77:702485..703338- >mRNA_F-serratus_M_contig77.18957.1 ID=mRNA_F-serratus_M_contig77.18957.1|Name=mRNA_F-serratus_M_contig77.18957.1|organism=Fucus serratus male|type=CDS|length=630bp|location=Sequence derived from alignment at F-serratus_M_contig77:702485..703338- (Fucus serratus male)back to top |