mRNA_F-serratus_M_contig77.18951.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig77.18951.1
Unique NamemRNA_F-serratus_M_contig77.18951.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig77.18951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig77contigF-serratus_M_contig77:471242..471956 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlobin-like
Ec32 orthologEc-07_007370.1
Exons2
Model size306
Cds size306
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932302.5892785-CDS-F-serratus_M_contig77:471241..4712691622932302.5892785-CDS-F-serratus_M_contig77:471241..471269Fucus serratus maleCDSF-serratus_M_contig77 471242..471269 -
1690964243.038883-CDS-F-serratus_M_contig77:471241..4712691690964243.038883-CDS-F-serratus_M_contig77:471241..471269Fucus serratus maleCDSF-serratus_M_contig77 471242..471269 -
1622932302.6072197-CDS-F-serratus_M_contig77:471678..4719561622932302.6072197-CDS-F-serratus_M_contig77:471678..471956Fucus serratus maleCDSF-serratus_M_contig77 471679..471956 -
1690964243.0539167-CDS-F-serratus_M_contig77:471678..4719561690964243.0539167-CDS-F-serratus_M_contig77:471678..471956Fucus serratus maleCDSF-serratus_M_contig77 471679..471956 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig77.18951.1prot_F-serratus_M_contig77.18951.1Fucus serratus malepolypeptideF-serratus_M_contig77 471242..471956 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig77.18951.1

>prot_F-serratus_M_contig77.18951.1 ID=prot_F-serratus_M_contig77.18951.1|Name=mRNA_F-serratus_M_contig77.18951.1|organism=Fucus serratus male|type=polypeptide|length=102bp
EAAPARRTSCVPREPSVISVMRSEEGSGLSISDEEDERFVLQREISSLEA
LSILRHVGNHEELGDSAGLLSPPISGCTACSGRDVRRRSGGLRPRERRGI
SK
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mRNA from alignment at F-serratus_M_contig77:471242..471956-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig77.18951.1 ID=mRNA_F-serratus_M_contig77.18951.1|Name=mRNA_F-serratus_M_contig77.18951.1|organism=Fucus serratus male|type=mRNA|length=715bp|location=Sequence derived from alignment at F-serratus_M_contig77:471242..471956- (Fucus serratus male)
GAGGCGGCCCCCGCGCGGCGTACCAGTTGCGTGCCTAGAGAGCCATCCGT
TATATCCGTTATGCGGTCGGAGGAAGGGTCAGGGCTTTCCATCTCGGACG
AAGAGGACGAGCGGTTTGTTTTGCAGCGGGAGATTTCATCCTTGGAGGCC
CTCTCCATCCTTCGGCACGTCGGAAACCACGAGGAGCTCGGGGATAGCGC
GGGGCTTCTCTCGCCTCCCATCTCGGGTTGCACCGCCTGTAGCGGGCGAG
ACGTACGGCGGAGGTCGGGCGGATTGAGGTAAGAGGCTCCTTGATCTTGC
GCTCTCTGGCCAGCGCGCTTGGGCTCCCGCAGTCAGTGGAAGCCTTTCGT
CCCGGAGCAAAGCCTTTCTGGGAGATGTTCACTCCACGCTCGCCTGTTGC
AGAATTGTGTTTATAAGCAGGAAGCATGCACGTTGATTTTCTGAGAGGGG
AATATTTTGGCGGCACACACTGTTCGTGCATTTCTGACACACCGTTCGTA
GCGTGCTTATCGCACCGCAACTCAACATACTGCATTTCGAAAGATAGGTG
AGCATTGATTCATTTTGAAAGATAGGTGAGCATCGAGCTTGGGTGGGTGC
ACGCTCGTGCGACCCCCCTTCATTGTTTGCGGCAACCGCTCTCGCCACAA
CTTGAGTATAGACATGTTTCCGTTTTTCCGATGTCAGGCCTCGTGAGCGA
CGAGGAATTTCGAAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig77:471242..471956-

>mRNA_F-serratus_M_contig77.18951.1 ID=mRNA_F-serratus_M_contig77.18951.1|Name=mRNA_F-serratus_M_contig77.18951.1|organism=Fucus serratus male|type=CDS|length=612bp|location=Sequence derived from alignment at F-serratus_M_contig77:471242..471956- (Fucus serratus male)
GAGGCGGCCCCCGCGCGGCGTACCAGTTGCGTGCCTAGAGAGCCATCCGT
TATATCCGTTATGCGGTCGGAGGAAGGGTCAGGGCTTTCCATCTCGGACG
AAGAGGACGAGCGGTTTGTTTTGCAGCGGGAGATTTCATCCTTGGAGGCC
CTCTCCATCCTTCGGCACGTCGGAAACCACGAGGAGCTCGGGGATAGCGC
GGGGCTTCTCTCGCCTCCCATCTCGGGTTGCACCGCCTGTAGCGGGCGAG
ACGTACGGCGGAGGTCGGGCGGATTGAGGAGGCGGCCCCCGCGCGGCGTA
CCAGTTGCGTGCCTAGAGAGCCATCCGTTATATCCGTTATGCGGTCGGAG
GAAGGGTCAGGGCTTTCCATCTCGGACGAAGAGGACGAGCGGTTTGTTTT
GCAGCGGGAGATTTCATCCTTGGAGGCCCTCTCCATCCTTCGGCACGTCG
GAAACCACGAGGAGCTCGGGGATAGCGCGGGGCTTCTCTCGCCTCCCATC
TCGGGTTGCACCGCCTGTAGCGGGCGAGACGTACGGCGGAGGTCGGGCGG
ATTGAGGCCTCGTGAGCGACGAGGAATTTCGAAAGCCTCGTGAGCGACGA
GGAATTTCGAAA
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