mRNA_F-serratus_M_contig753.18793.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig753.18793.1 vs. uniprot
Match: D7FTD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD8_ECTSI) HSP 1 Score: 233 bits (595), Expect = 3.250e-64 Identity = 137/293 (46.76%), Postives = 174/293 (59.39%), Query Frame = 3
Query: 201 RGGYCMGDPHCYTFDGVYYDCQGQGDFALVEVVAAEAEVQARFEQSEFWSPSVTVTTAVAAREGNSSLVEVT-RFPETEVLVDGTPY------DNETVANRVTLQVSESSIIMEFLSGLKIQ----YNLTSWGGSVFVYVPNTLETSGLLGNNNGNWNDDWQTSAGEVLTLSSTVQSRAEGTDFCTSQWRRTDSLFTTASPDLVPAANET--YTPVTLPEVVPENVTELCGENSACIFDTIVAGPEVGAETLEAIEKFVALLADEGG-LCEQNTFSVDGAPPCTDCPQGRDFG 1037
RG YC GDPHC TFDG+YYDC G GDF L+E A A V ARFE SP + TT VAA E SS++EVT E +L+DG Y D V L V++ ++ M F SGL++ + ++ G V+VY P + T G+LG NNGN DDW S GE + S S AEG ++CTS W +SL TT S L +T YT + +P+ +P +V ELCG+N+ CIFD IVAG +VGA TLEA E+F + GG +CE+NTFS DG PCTDCP+G G
Sbjct: 2 RGAYCHGDPHCQTFDGLYYDCHGDGDFVLLESADAGAVVHARFEP--LVSPDASFTTGVAATEDGSSVIEVTVSGGERTILIDGEAYAYGEGDDLPATMTGVALTVTDQNVDMWFPSGLQVNARRWFTDPNYIGGVYVYAPLDMSTVGVLGTNNGNRVDDWTDSTGETIEQGSA--SIAEGYNYCTSNWEAEESLLTTPSRRLRSRHLQTSDYTALVIPDAIPTDVEELCGDNTECIFDAIVAGLDVGAATLEAAEEFHTEVQAAGGDVCEENTFSSDGLSPCTDCPEGETSG 290
BLAST of mRNA_F-serratus_M_contig753.18793.1 vs. uniprot
Match: D7FUE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI) HSP 1 Score: 231 bits (590), Expect = 1.360e-60 Identity = 142/316 (44.94%), Postives = 183/316 (57.91%), Query Frame = 3
Query: 144 TPGPTSP-PTSALSPTVT---STRGGYCMGDPHCYTFDGVYYDCQGQGDFALVEVVAAEAEVQARFEQSEFWSPSVTVTTAVAAREGNSSLVEVTRFP-ETEVLVDGTPY------DNETVANRVTLQVSESSIIMEFLSGLKIQ----YNLTSWGGSVFVYVPNTLETSGLLGNNNGNWNDDWQTSAGEVLTLSSTVQSRAEGTDFCTSQWRRTDSLFTTASPDLVPAANET--YTPVTLPEVVPENVTELCGENSACIFDTIVAGPEVGAETLEAIEKFVALLADEGG-LCEQNTFSVDGAPPCTDCPQGRDFG 1037
TP P +P P + +P T + RG YC GDPHC TFDG+YYDC G GDF L+E A V ARFE SP + TT VAA EG SS++EVT E +L+DG Y D V L V++ ++ M F SGL++ + ++ G V+VY P + T G+LG NNGN DDW S+GE + S S AEG ++CTS W +SL TT+S L +T Y +P+V+P +V ELCG+N+ CIFD IV G +VGA TLEA E+F + GG +CE+N FS DG PCTDCP G G
Sbjct: 181 TPSPVAPTPVTDATPAPTPAPTMRGAYCHGDPHCQTFDGLYYDCHGDGDFVLLESADTGAVVHARFEP--LVSPDASFTTGVAATEGGSSVIEVTVSDGERTILIDGEAYAYDEGDDLPATMTGVALTVTDQNVDMLFPSGLQVNARRWFTDPNYIGGVYVYAPLDMPTVGVLGTNNGNRADDWTDSSGETIDAGSA--SVAEGYNYCTSNWEAEESLLTTSS-RLRSRRLQTSDYVAPVIPDVIPTDVEELCGDNTECIFDAIVVGLDVGAATLEAGEEFETEVQAAGGDVCEENAFSSDGLSPCTDCPDGETSG 491
BLAST of mRNA_F-serratus_M_contig753.18793.1 vs. uniprot
Match: D8LQX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX7_ECTSI) HSP 1 Score: 223 bits (569), Expect = 4.900e-58 Identity = 136/302 (45.03%), Postives = 179/302 (59.27%), Query Frame = 3
Query: 168 TSALSPTVTSTRGGYCMGDPHCYTFDGVYYDCQGQGDFALVEVVAAEAEVQARFEQ-SEFWSPSVTVTTAVAAREGNSSLVEVTRFPE--TEVLVDGTPYD-NETVANRVTLQVSESSIIMEFLSGLKIQYNLTSWGGSVFV--YVPNTLETSGLLGNNNGNWNDDWQTSAGEVLTLSSTVQSRAEGTDFCTSQWRRTD--SLFTTASPD---LVPAANETYTPVTLPEVVPENVTELCGENSACIFDTIVAGPEVGAETLEAIEKFVALLADEGGLCEQNTFSVDGAPPCTDCPQGRDFGS 1040
T A SPT RGG GDPH +DG YDC GQG+F L + A E+EVQARF+Q S+ +P+VTVTT +AAREG SSL++VT EVLVDG YD + T V L+V+ S + + F SGL + + TS G + V Y P +L T+GLLGNNNG DD+ T GE + ++ + EGT++CT+ W T SLFT A + + Y LP+ +P ++TELCG+N+ CI D ++AG EVG TLE + A + GLC N+FS GAPPCT CP G G+
Sbjct: 346 TPAPSPTPEPKRGGSADGDPHLRVYDGTGYDCHGQGEFVLTKAAATESEVQARFQQWSQNPNPAVTVTTGIAAREGTSSLIQVTTAASGGVEVLVDGELYDASATSVIGVALEVTSSRVEISFESGLDV-FVSTSINGMLRVNAYAPVSLATTGLLGNNNGELGDDFTTVDGETVGFATASPTVEEGTNYCTTNWCTTADASLFTYAEGEDHGTFDLCDAVYAAPVLPDAIPASITELCGDNADCIIDALLAGEEVGQATLEGQAEDRAYQEEVAGLCASNSFSSTGAPPCTTCPDGEVSGT 646
BLAST of mRNA_F-serratus_M_contig753.18793.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.520e-54 Identity = 136/315 (43.17%), Postives = 181/315 (57.46%), Query Frame = 3
Query: 171 SALSPTVTST--RGGYCMGDPHCYTFDGVYYDCQGQGDFALVEVVAAEAEVQARFEQ-SEFWSPSVTVTTAVAAREGNSSLVEVTRFPE--TEVLVDGTPYDNE--TVANRVTLQVSESSIIMEFLSGLKIQYNLTSWGGSVFV--YVPNTLETSGLLGNNNGNWNDDWQTSAGEVLTLSSTVQSRAEGTDFCTSQWRRTD--SLFTTASPD---LVPAANETYTPVTLPEVVPENVTELCGENSACIFDTIVAGPEVGAETLEAIEKFVALLADEGGLCEQNTFSVDGAPPCTDCPQGRDFGSRRHCLCPLSRP 1073
SA SP + RGG DPH +D V YDC GQG+F + + A ++EVQARF+Q S+ +P VTV TAVAAREG SS+++ T EV VDG YD T V L++ E+ + M F SG+++ L+ GG + + YVP L T+GLLGNNNGN DDW+T+ E++ +S + AEGT++CT+ W T+ S+FT A + + Y LP+V+P VTELCG+N+ C+FD ++AG EVG TL+ E GGLC NTFS G PPCTDCP G G P P
Sbjct: 488 SACSPIADNVPKRGG----DPHVEGYDDVGYDCHGQGEFVVTKAAATDSEVQARFQQWSQNPTPGVTVATAVAAREGTSSVIQATSTASGGLEVWVDGELYDEAAGTTLTGVALELLEARVEMIFPSGMEVIV-LSRTGGILRIDAYVPLDLATTGLLGNNNGNIGDDWRTADNEIVEFASEHPTVAEGTNYCTTNWCTTEDSSIFTYAEGEDHGTYDLCDVVYVAPVLPDVIPAAVTELCGDNTNCVFDALLAGEEVGEATLKEEEAARVYQEGLGGLCTTNTFSSTGTPPCTDCPAGEVSGRGAKVCVPQGVP 797
BLAST of mRNA_F-serratus_M_contig753.18793.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI) HSP 1 Score: 197 bits (500), Expect = 2.950e-50 Identity = 126/291 (43.30%), Postives = 170/291 (58.42%), Query Frame = 3
Query: 204 GGYCMGDPHCYTFDGVYYDCQGQGDFALVEVVAAEAEVQARFEQ-SEFWSPSVTVTTAVAAREGNSSLVEVTRFPE--TEVLVDGTPYD-NETVANRVTLQVSESSIIMEFLSGLKIQYNLTSWGGSVFV--YVPNTLETSGLLGNNNGNWNDDWQTSAGEVLTLSSTVQSRAEGTDFCTSQWRRTD--SLFTTASPD---LVPAANETYTPVTLPEVVPENVTELCGENSACIFDTIVAGPEVGAETLEAIEKFVALLADEGGLCEQNT-FSVDGAPPCTDCPQGRDFGS 1040
GG GDPH +DG YDC GQG+F L + A E+EVQARF+Q S+ P+VTVTT +AAREG SSL++VT EVLVDG YD + + + L+V+ S + + F SGL + + TS G + V Y P +L T+GLLGNNNG DD+ T GE + ++ + EGT++CT+ W T SLFT A + + Y LP+ +P ++TELCG+N+ CI D ++AG EVG TLE + A E +C + FS GAPPCT CP G G+
Sbjct: 3 GGSADGDPHLRVYDGTGYDCHGQGEFVLTKAAATESEVQARFQQWSQNPDPAVTVTTGIAAREGTSSLIQVTTAASGGVEVLVDGELYDASASSVIGIALEVTSSRVEISFESGLDV-FVSTSINGMLRVNAYAPVSLATTGLLGNNNGELGDDFTTVDGETVGFATASPTVEEGTNYCTTNWCTTADASLFTYAEGEDHGTFDLCDAVYAAPVLPDTIPASITELCGDNADCIIDALLAGEEVGQATLEGQAEDRAY--QEEVVCARAILFSSTGAPPCTTCPDGEVSGT 290
BLAST of mRNA_F-serratus_M_contig753.18793.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI) HSP 1 Score: 190 bits (482), Expect = 3.590e-46 Identity = 120/285 (42.11%), Postives = 160/285 (56.14%), Query Frame = 3
Query: 144 TPGPTSPPTSALSPTVTSTRGGYCMGDPHCYTFDGVYYDCQGQGDFALVEVVAAEAEVQARFEQSEFWSPSVTVTTAVAAREGNSSLVEVT-RFPETEVLVDGTPY-----DNETVANRVTLQVSESSIIMEFLSGLKIQ----YNLTSWGGSVFVYVPNTLETSGLLGNNNGNWNDDWQTSAGEVLTLSSTVQSRAEGTDFCTSQWRRTDSLFTTASPDL--VPAANETYTPVTLPEVVPENVTELCGENSACIFDTIVAGPEVGAETLEAIEKFVALLADEGG 962
TP PT PT RG YC GDPHC TFDG+ +DC G GDF L+ A V ARFE SP + TT VAA E SS++EVT E +L+DG PY D VTL V++ ++ M F SGL++ + ++ G V+VY P + T G+LG NNGN DDW S GE T+ + S AEG ++CTS W+ SL ++ S L + + + YT +P+V+P +V ELC +N+ CIFD IV G +VGA TLEA ++F + GG
Sbjct: 188 TPAPTPAPTM---------RGAYCHGDPHCRTFDGLAFDCHGDGDFVLLNSADTGAMVHARFEP--LVSPDASFTTGVAATEDGSSVIEVTVNDGERTILIDGEPYAYEGGDFPETMTGVTLTVTDQNVDMLFPSGLQVNARRWFTDPNYIGGVYVYAPLAMSTVGVLGTNNGNMADDWTDSTGE--TIGTGAASIAEGYNYCTSNWQPEVSLLSSPSRRLRRLQTSVDDYTAPVIPDVIPTDVEELCRDNTECIFDAIVVGLDVGAATLEAGDEFETEVEAAGG 459
BLAST of mRNA_F-serratus_M_contig753.18793.1 vs. uniprot
Match: D7G5U3_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U3_ECTSI) HSP 1 Score: 114 bits (284), Expect = 9.330e-25 Identity = 79/189 (41.80%), Postives = 103/189 (54.50%), Query Frame = 3
Query: 207 GYCMGDPHCYTFDGVYYDCQGQGDFALVEVVAAEAEVQARFEQ-SEFWSPSVTVTTAVAAREGNSSLVEVTRFPE---TEVLVDGTPYDNET-VANRVTLQVSESSIIMEFLSGLKIQYNLTSWGGSVFVYVPNTLETSGLLGNNNGNWNDDWQTS------------AGEVLTLSSTVQSRAEGTDFC 722
G+ GDPH T DG+ YDC G+G+F L +V + + EVQ RFE S+ S TVTTA+ ARE SS+V+VT E+LVDG YD V L V+ S + M FLS ++I + + SV V VP LET+GLLGNNNG+ DDW AGE + +++ RA G C
Sbjct: 15 GFNGGDPHLVTLDGLAYDCHGRGEFFLTKVESTQGEVQVRFEPWSQDPSGPFTVTTAMVAREEGSSVVQVTLAASGSALEILVDGETYDEAANPGTGVMLDVTSSQVDMLFLSCMEISVSFANAMLSVEVNVPRPLETTGLLGNNNGDPVDDWMVCLGIDQCVFDFVFAGEAVGMATLAGLRACGVPAC 203
BLAST of mRNA_F-serratus_M_contig753.18793.1 vs. uniprot
Match: A0A1Z5KSD0_FISSO (VWFD domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSD0_FISSO) HSP 1 Score: 101 bits (251), Expect = 3.800e-18 Identity = 89/307 (28.99%), Postives = 144/307 (46.91%), Query Frame = 3
Query: 168 TSALSPTVTSTRGGYCMGDPHCYTFDGVYYDCQGQGDFALVEVVAAEAEVQARFEQ-SEFWSPS---VTVTTAVAAREGNSSLVEVTR--FPET-----------EVL--VDGTPYDNETVANRVTLQVSESSIIMEFL---SGLKIQYNLTSWGGSVF---VYVPNTLETSGLLGNNNGNWNDDWQTSAGEVLTLSSTVQSRAE--GTDFCTSQW---RRTDSLFTTASPDLVPAANETYTPVTLPEV---------VPENVTELCGENSACIFDTIVAGPEVGAETLEAIEKFVALLADEGGLCE 971
T+A+ T+ +GDPH Y+FDG+ YDCQ +G+F L++ + EVQ RF ++ +SP V V EG++ VE++ FP++ +VL VDG D + ++V+ + +E L S K+ N+ G F +VP+ +T+G+ G+ +G+ ++DW+T GE+L + +++ R G D+CT+ W + DSLF A +L E LP V V ELC CI D + G E A T+ + + +GG C+
Sbjct: 159 TTAIPGAAVKTKTACAVGDPHIYSFDGLAYDCQAEGEFTLMKSTITQREVQGRFAFFADIFSPGWAWAVVKGFVTQDEGDTPKVELSFPIFPDSFAPNTIGQENCKVLFYVDGVQRDLNDGSGSPKVKVTWTRKTVEILYTASQFKVTANVAYANGCYFEVCTHVPDVDKTTGMFGSADGDTSNDWKTRDGELLPVPASLTDRLRWAGYDYCTTHWCIREQADSLF--AHKELGLDWFEDIMHCNLPHGSTVEEYLRDVDPKVIELCKNEIMCIIDARLMGVEAAASTVASRKAVATTCNGKGGECD 463
BLAST of mRNA_F-serratus_M_contig753.18793.1 vs. uniprot
Match: A0A7S1V9E9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9E9_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 4.310e-13 Identity = 79/272 (29.04%), Postives = 122/272 (44.85%), Query Frame = 3
Query: 207 GYCMGDPHCYTFDGVYYDCQGQGDFALVE--VVAAEAEVQARFEQSEFWSPSVTVTTAVAAREGNSSLVEVTRFPETE---------VLVDG---TPYDNETVANRVTLQVSESSIIMEFLSGLKIQYNLTSWGGSVF-------VYVPNTLETS----GLLGNNNGNWNDDWQTSAGEVLTLSSTVQSR--AEGTDFCTSQW---RRTDSLFT---TASPDLVPAANETYTPVTLPEVVPENVTELCGENSACIFDTIVAGPEVGAETLEA 923
G GDPH TFDG+ YDCQG+G+F LV+ V + E+QARF S VTVTT V A ++V+ +P + + VDG T +V + +S + + F S + + W F V++P+ GLLG+ + + +DW + G LT + SR ++CT W TDSLFT AS + ++ Y ++ + + +LCG + AC+ D I+ +TL+A
Sbjct: 136 GSSNGDPHMATFDGLGYDCQGEGEFVLVKDLVAGSSLEIQARFRPPSSNS-RVTVTTGVVAMVEGGPRIQVS-YPASASPDDSCPLLLFVDGEQRTLQAGSIADGKVNIDISGDTTEVRF-SASNVIITMRQWASGTFGCGLHTIVFLPDEFAAGRDLVGLLGSIDNDPTNDWMQTDGVALTFPDSYASRYGQVAYEYCTMYWCLRDPTDSLFTYEEMASFEFFSNCDQDYIGGVDLDMASQELRDLCGNDIACLIDGILGDLADAQQTLDA 404
BLAST of mRNA_F-serratus_M_contig753.18793.1 vs. uniprot
Match: A0A2C9KTM4_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KTM4_BIOGL) HSP 1 Score: 76.6 bits (187), Expect = 2.000e-10 Identity = 82/294 (27.89%), Postives = 139/294 (47.28%), Query Frame = 3
Query: 216 MGDPHCYTFDGVYYDCQGQGDFALVEVVAAEAEVQARFEQSEFWSPSVT---VTTAVAAREGNSSL--VEVTRFPETEVLVDG-----TPYDNET----VANRVTLQVS------ESSIIMEFLSGLKIQYNLTSWGGSVFVYVPNTLE--TSGLLGNNNGNWNDDWQTSAGEVLTLSSTVQ------SRAEGTDFCTS--QWRRTDSLFTTASPDLVPAANETYTPVTLPEVVPENVTELCGE-NSACIFDTIVAGPEVGAETL----EAIEKFVALLADEGGLCEQNTFSVD 992
+GDPH T DG+ Y G G++ L+ + + + +Q R E++E + ++T + TA A +E N S VE++ ++ +++ G T + ET V + TL V+ ++ ++ F SG+ I+ + + + VP E T GLLGN NGN +D++ G VL +S+ + ++A + TS + +S T P+ P + P + + ELCGE N ACIFD +V G + A T E +E + LA+ + S+D
Sbjct: 221 LGDPHITTLDGITYTMNGWGEYILLWIFSQDFRLQCRTERAEGQNGTLTNATIFTAFAVQESNMSSFQVELSASKKSMIIMAGGIDVTTEFYKETQPGIVVSTDTLSVTREYSNNKTMVVAGFPSGVSIKVYIAAKSLLIEYNVPKEYENFTVGLLGNFNGNTDDEFTLPDGTVLPTNSSEREIYHNFAKAWAVNSTTSVFSYNPGESTETYQHPEFEPFYRDEADPTAVAKA-----KELCGETNDACIFDYLVTGDKEFATTTKQAKEEMEVIIISLANTPPTLTVSNESLD 509 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig753.18793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig753.18793.1 >prot_F-serratus_M_contig753.18793.1 ID=prot_F-serratus_M_contig753.18793.1|Name=mRNA_F-serratus_M_contig753.18793.1|organism=Fucus serratus male|type=polypeptide|length=326bp MGDPHCYTFDGVYYDCQGQGDFALVEVVAAEAEVQARFEQSEFWSPSVTVback to top mRNA from alignment at F-serratus_M_contig753:49028..56627+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig753.18793.1 ID=mRNA_F-serratus_M_contig753.18793.1|Name=mRNA_F-serratus_M_contig753.18793.1|organism=Fucus serratus male|type=mRNA|length=7600bp|location=Sequence derived from alignment at F-serratus_M_contig753:49028..56627+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig753:49028..56627+ >mRNA_F-serratus_M_contig753.18793.1 ID=mRNA_F-serratus_M_contig753.18793.1|Name=mRNA_F-serratus_M_contig753.18793.1|organism=Fucus serratus male|type=CDS|length=1956bp|location=Sequence derived from alignment at F-serratus_M_contig753:49028..56627+ (Fucus serratus male)back to top |