mRNA_F-serratus_M_contig753.18792.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig753.18792.1
Unique NamemRNA_F-serratus_M_contig753.18792.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig753.18792.1 vs. uniprot
Match: A0A6A3IEW9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3IEW9_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.700e-28
Identity = 122/436 (27.98%), Postives = 186/436 (42.66%), Query Frame = 1
Query:    1 AWRNLKFHYRAKGTREIIRLSHEINGKTMEPGSDPFKFTMEVDRLAADLHRLDDKSVTELRKYVIIVSSLSADFEMKCRILENNPAGLNRAEIERVVGNQYNRLLRQQQDSKALSAS------KGTVT---ANREKGKNRRLHHKFDSKCFNCGKKGHRAGDCRSVKKKGEKSGATDDREEGGDSGSDRKEEWEPDSGATFHMSHTCAGMSAYKKASPGTNVEIAEGNILPVDRFGRIEVDLDQPGRTTKMVKMDDVACVPGPSRNLLSTVKAVE-----QWGKPLIYYWYKNKAALGFPREESLFFKLCPPALG-----AGASRDVMEVHRMLAHTSED----NSRKTAG--TIGIETTGQWGACETYFQFKAKRYVV--PKKTEERASVSGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSD 1227
            AW  L+  Y        + ++  ++   ME G    K     D L   L  L +  + E R+ VI++SSLS ++E+ C I EN+       E++  +  +Y RL +++   +AL  +      KG  T       KG + R H  F  KCFNCG+ GH   DC +         A +D +     G  R   W  DSGAT HM+     +  YK       V IA+G  + V   G + +     G   K +KM DV  +PG  R LLS  +  +     ++ K     W K+K      +    +   C   +      AG   +    H  + H ++D      R T G  T+  ++    G C      K K+ V   P ++  + + + Q    DV GPMK  S GG  YV+ FVDD +++ V  F+ KKS+
Sbjct:   83 AWNTLRDFYNRTTMHNRLTMTRRLHEFKMEDGVTTAKHRDNFDELIVGLQTLGEP-LGEARQLVILLSSLSPEYELICSIAENSK-DFTLIEVKEKLRKEYERLDKKEGAERALKVATDGSKYKGAKTFKGGKGSKGYSSRKHGGFKGKCFNCGQVGHMKRDCPAPN-------AGNDNDAVFAVGKSRSAGWLIDSGATVHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLT----GIDGKRIKMIDVLYIPGLDRQLLSVSRLADRGVSVEFQKKSCTIWNKSKVIASGKKVGKAYVLDCEKYMAHYVEYAGVDSEWELWHARMGHLNKDALVKTQRATTGMPTLEHKSMTMCGGC-----MKGKQTVAHFPSRSMSKTTKALQLVHTDVMGPMKTKSKGGARYVLTFVDDYSKYVVAYFITKKSE 500          
BLAST of mRNA_F-serratus_M_contig753.18792.1 vs. uniprot
Match: A0A6A3KTF1_9STRA (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KTF1_9STRA)

HSP 1 Score: 128 bits (321), Expect = 2.300e-28
Identity = 122/436 (27.98%), Postives = 186/436 (42.66%), Query Frame = 1
Query:    1 AWRNLKFHYRAKGTREIIRLSHEINGKTMEPGSDPFKFTMEVDRLAADLHRLDDKSVTELRKYVIIVSSLSADFEMKCRILENNPAGLNRAEIERVVGNQYNRLLRQQQDSKALSAS------KGTVT---ANREKGKNRRLHHKFDSKCFNCGKKGHRAGDCRSVKKKGEKSGATDDREEGGDSGSDRKEEWEPDSGATFHMSHTCAGMSAYKKASPGTNVEIAEGNILPVDRFGRIEVDLDQPGRTTKMVKMDDVACVPGPSRNLLSTVKAVE-----QWGKPLIYYWYKNKAALGFPREESLFFKLCPPALG-----AGASRDVMEVHRMLAHTSED----NSRKTAG--TIGIETTGQWGACETYFQFKAKRYVV--PKKTEERASVSGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSD 1227
            AW  L+  Y        + ++  ++   ME G    K     D L   L  L +  + E R+ VI++SSLS ++E+ C I EN+       E++  +  +Y RL +++   +AL  +      KG  T       KG + R H  F  KCFNCG+ GH   DC +         A +D +     G  R   W  DSGAT HM+     +  YK       V IA+G  + V   G + +     G   K +KM DV  +PG  R LLS  +  +     ++ K     W K+K      +    +   C   +      AG   +    H  + H ++D      R T G  T+  ++    G C      K K+ V   P ++  + + + Q    DV GPMK  S GG  YV+ FVDD +++ V  F+ KKS+
Sbjct:   83 AWNTLRDFYNRTTMHNRLTMTRRLHEFKMEDGVTTAKHRDNFDELIVGLQTLGEP-LGEARQLVILLSSLSPEYELICSIAENSK-DFTLIEVKEKLRKEYERLDKKEGAERALKVATDGSKYKGAKTFKGGKGSKGYSSRKHGGFKGKCFNCGQVGHMKRDCPAPN-------AGNDNDAVFAVGKSRSAGWLIDSGATVHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLT----GIDGKRIKMIDVLYIPGLDRQLLSVSRLADRGVSVEFQKKSCTIWNKSKVIASGKKVGKAYVLDCEKYMAHYVEYAGVDSEWELWHARMGHLNKDALVKTQRATTGMPTLEHKSMTMCGGC-----MKGKQTVAHFPSRSMSKTTKALQLVHTDVMGPMKTKSKGGARYVLTFVDDYSKYVVAYFITKKSE 500          
BLAST of mRNA_F-serratus_M_contig753.18792.1 vs. uniprot
Match: A0A6A4BQ03_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4BQ03_9STRA)

HSP 1 Score: 124 bits (311), Expect = 5.270e-27
Identity = 122/437 (27.92%), Postives = 181/437 (41.42%), Query Frame = 1
Query:    1 AWRNLKFHYRAKGTREIIRLSHEINGKTMEPGSDPFKFTMEVDRLAADLHRLDDKSVTELRKYVIIVSSLSADFEMKCRILENNPAGLNRAEIERVVGNQYNRLLRQQQDSKALSASKGTVTANR---------EKGKNRRLHHKFDSKCFNCGKKGHRAGDCRSVKKKGEKSGATDDREEGGDS------GSDRKEEWEPDSGATFHMSHTCAGMSAYKKASPGTNVEIAEGNILPVDRFGRIEVDLDQPGRTTKMVKMDDVACVPGPSRNLLSTVKAVE-----QWGKPLIYYWYKNKAALGFPREESLFFKLCPPALG-----AGASRDVMEVHRMLAHTSEDNSRKTA-GTIGIETTGQWGACETYFQFKAKRYVV--PKKTEERASVSGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSD 1227
            AW  L+  Y        + ++  ++   ME G    K     D L   L  L ++ + E R+ VI++SSLS ++E+ C I+EN+       E++  +  +Y RL +++   +AL AS       R          KG + R H  F  KCFNC + GH   DC              D   G D+      G  R   W  DSGAT HM+     +  YK       V IA+G  + V   G + +     G   K +KM DV  +PG  R LLS  +  E     ++ K     W K+KA     +    +   C   +      A    +    H  + H ++D   KT   T G+ T             K K+ V   P ++  + +   Q    DV GPMK  S GG  YV+ FVDD +++ V  F+ KKS+
Sbjct:   59 AWNTLRDFYNRTTMHNRVTMTRRLHEFKMEDGVTMAKHLDNFDELIVGLQTLGEQ-LDEARQLVILLSSLSPEYELICSIVENSK-DFTLIEVKEKLLKEYERLDKKEGAERALKASTDGNKYKRAKTFKGGKGSKGYSARKHSGFKGKCFNCSQVGHMKRDC-------------PDPNMGNDNDAVLAVGKSRSAGWLIDSGATAHMTPHRNDLFEYKDLDSNIEVTIADGKKIRVVGTGSVRLT----GIDGKRIKMIDVLYIPGLDRQLLSVSRLAERGMSVEFQKKSCTIWNKSKAIASGKKIGKAYVLDCEKDMAHYVEYAEVDSEWELWHARMGHLNKDALAKTQRATTGMPTLEHKSMTLCGGCMKGKQTVAHFPSRSMSKTTKVLQLVHTDVMGPMKTKSKGGARYVLTFVDDYSKYVVAYFITKKSE 476          
BLAST of mRNA_F-serratus_M_contig753.18792.1 vs. uniprot
Match: A0A1Y1K2V0_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1K2V0_PHOPY)

HSP 1 Score: 86.7 bits (213), Expect = 1.570e-14
Identity = 104/415 (25.06%), Postives = 181/415 (43.61%), Query Frame = 1
Query:  160 DKSVTELRKYVIIVSSLSA------DFEMKCRILENNPAGLN--------RAEIERVVGNQYNRLLRQQQ-------DSKALSASKGTVTANREKGKNRRLHHKFDSK---------CFNCGKKGHRAGDCRSVKKK--GEKSGATDDREEGGDSGSDRKEEWEPDSGATFHMSHTCAGMSAYKKASPGTNVEIAEGNILPVDRFGR--IEVDLDQPGRTTKMVKMDDVACVPGPSRNLLSTVKAVEQWGKPLIYYWYKNKAALGFPREE-------------SLFFKLCPPALG------------AGASRDVMEVHRMLAHTSEDNSRKTAGTIGIETTGQWGACETYFQFKAKRYVVPKKTEERASVSGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSD 1227
            D  VT + K+  ++  ++A      D  +  ++L+  P   +        R + ++   N  N L  ++         S+A   S G + A R + K++  H K  +K         C+ CG K H   +C + K+K   E+SG      E  ++ +D ++ W  DSGAT H+++     S++++    T V++  GN   +D  G+  +EV     G+     +M +V  VP   RNL S   A+++      Y +  N+    F  +E             ++  K+  PA                  + + E H ML H +     K     GIE T Q   CE   + K  R V   + ++RA   G+   VD+ GPM+ +S GG+ Y + F  D ++F+++KF+K+KS+
Sbjct:  131 DDMVTHISKFETLILKMNALNVKQDDMSLVVKLLDTLPDNYDNLRQAWWARPDEQQTFNNLVNVLTSEESRRKQRHLQSEASEESTGALLAGRYRSKSQISHKKNTTKGVTTKKTFTCYGCGGKNHIKRNCPNRKQKFYNEESGENAFITEVLNAEND-EDFWIVDSGATDHLTYHGEWFSSFEQFK--TPVKVHIGNKTSMDALGKGVVEVKTFVDGKIFDF-RMLNVLFVPAARRNLFSMTAALDKG-----YEFKSNQKECFFVSDEKTKAKGRRVGQLFTMIMKVKVPANSLLQLSNTKETNVTSKLKSIQEWHEMLGHQNRVQVEKVLNRNGIEYTKQDFFCEACVKGKQHRKVFQVR-QQRAQREGEVMNVDLCGPMEITSYGGSRYFICFTCDYSKFRLIKFLKEKSE 535          
BLAST of mRNA_F-serratus_M_contig753.18792.1 vs. uniprot
Match: A0A5D6Y8Z1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8Z1_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 7.160e-13
Identity = 85/288 (29.51%), Postives = 125/288 (43.40%), Query Frame = 1
Query:  409 FDSKCFNCGKKGHRAGDCRSVKKKGEKSGATDDREEGGDSGSDRKEEWEPDSGATFHMSHTCAGMSAYKKASPGTNVEIAEGNILPVDRFGRIEVDLDQPGRTTKMVKMDDVACVPGPSRNLLSTVKA-----VEQWGKPLIYYWYKNKAALGFPREESLFFKLCPPALGA-----GASRDVMEV-HRMLAHTSEDNSRKT-AGTIGIE--TTGQWGACETYFQFKAKRYVVPKK-TEERASVSGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSD 1227
            F  KCF CG+ GH+A +CR      E +         G         W  DSGAT HMS   +  +A +  S    V +A G  +     G + V L  PG  +  +K  DV  +PG  R LLS  K      V ++G+        +K  +  P+  +++ +L   A  A     G      E+ H  L H S++ +R+T   T G+     G+   C    + K      PK  T  +++   +    DV GPM   S GG  YV++FVDD +R     F+KKKS+
Sbjct:  508 FTGKCFECGRIGHKAAECRRRASNEEITFMATVAPADG---------WLIDSGATSHMSPESSDFAALRPLSEMIKVTVANGAFVTASEVGDVVVAL--PGGRSATLK--DVLYIPGLGRRLLSVQKMAAHGLVVEFGERACKIKRGDKVVMAVPKVGNIY-RLDGDAQAAMVVEHGPHPSERELWHARLGHPSDERARQTLTATKGLPHLDAGESKICGGCARGKMAVASFPKSSTTIKSTRVLELVHADVMGPMSQPSQGGARYVLLFVDDYSRHVTAYFLKKKSE 781          
BLAST of mRNA_F-serratus_M_contig753.18792.1 vs. uniprot
Match: A0A0J7K4F4_LASNI (Rna-dependent dna polymerase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K4F4_LASNI)

HSP 1 Score: 79.7 bits (195), Expect = 2.630e-12
Identity = 84/307 (27.36%), Postives = 133/307 (43.32%), Query Frame = 1
Query:  379 KGKNRRLH-HKFDSKCFNCGKKGHRAGDCRSVKKKGEKSGATDDREEGGDSGSD---RKEEWEPDSGATFHMSHTCAGMSAYKKASPGTNVEIAEGNILPVDRFGRIEVDLDQPGRTTKMVKMDDVACVPGPSRNLLSTVKAVEQ-----WGKPLIYYWYKNKAALGFPREESLFFKLCPPALGAGASR-----DVMEVHRMLAHTSEDNSRKT-----AGTIGIETTGQWGACETYFQFKAKRYVVPKKTEERASVSGQRFFV-----DVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSD 1227
            KG N + +  KFD KCFNC K GHR+ DCRS KKK +K+  +DD        ++   + E W  DS AT HM +         K         AE  +  + + G + ++L    R  K++K++++  VP    NLLS     E+     + K   Y   K+ + +    +    + +      A A++     ++++ H+   H + ++ +K         +   T      CE     K K +V P K     SV  +R  +     D+ GPM   SLGG  Y V F DDCT +     +  +SD
Sbjct:  220 KGNNTKTNFQKFDGKCFNCDKIGHRSRDCRS-KKKSDKAANSDDVLTAIACNAELIRKSESWCLDSSATRHMCNDKQKFEVINKDEQSRVYTAAEHYVKSI-KTGNVSLNLKANQRENKVIKLENILYVPELRNNLLSVPTVTERGYNVTFNKNRAYIKRKDGSTILTATKRDQLYVVDEEVNRAFAAKHETDENLLKWHQRYGHVNINDLKKMKVEEMVDGMNFVTKSSEFICEVCA--KCKIHVQPFKN----SVHHEREILNLIHSDICGPMSVESLGGAKYFVTFSDDCTGYTETMMLHNRSD 518          
BLAST of mRNA_F-serratus_M_contig753.18792.1 vs. uniprot
Match: A0A225V993_9STRA (Integrase, catalytic core protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V993_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.030e-11
Identity = 108/432 (25.00%), Postives = 168/432 (38.89%), Query Frame = 1
Query:    1 AWRNLKFHYRAKGTREIIRLSHEINGKTMEPGSDPFKFTMEVDRLAADLHRLDDKSVTELRKYVIIVSSLSADFEMKCRILENNPAGLNRAEIERVVGNQYNRLLRQQQDSKALSASKGTVTANR-----------EKGKNRRLHHKFDSKCFNCGKKGHRAGDCRSVKKKGEKSGATDDREEGGDSGSDRKEEWEPDSGATFHMSHTCAGMSAYKKASPGTNVEIAEGNILPVDRFGRIEVDLDQPGRTTKMVKMDDVACVPGPSRNLLSTVKAVE-------QWGKPLIYYWYK--------NKAALGFPREESLFFKLCPPALGAGASRDVMEVHRMLAHTSEDNSRKTA-GTIGIETTGQW-----GACETYFQFKAKRYVV--PKKTEERASVSGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRF 1194
            AW  L   Y        + ++  ++   ME  S       + D L   L  L +  + + R+ VI++SSL A++E+   I+EN+   +   E +  +  +Y R                                  KG   R   +F  K F+CG+ GH        ++  EK+      +     G DR   W  DSGAT  M+     +  Y   S G NV I +G  + V   G + ++    G   K ++M +V   PG  R LLS  K  +       Q    +I+  YK         KA +    +++ ++  C     AG   +    H  + H +ED+  KT  G  G+  T        G C      K K+ V   P ++    S   +    DV GPMK  S GG  YV++FVDD +R+
Sbjct:  188 AWNTLLEFYNRTTMHNRMAMTRRLHEFKMEGESTMAGHLDKFDELIVGLQTLGEP-LDDSRQLVILLSSLPAEYELIVSIVENSK-DVTLIEAKEKLLKEYERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRYDHKGNGSRRLGEFTGKYFSCGQVGHMK------REYPEKANGGSHEDSVFAVGEDRSAGWLVDSGATARMTPHRNDLYEYSAMSAGMNVTIVDGKKIRVTGTGSVRLN----GIDGKSIRMVEVLHTPGLDRRLLSVGKLADRGMSVEFQRNSCVIWNEYKAIASGKKYGKAYVLDCHQDTAYYTEC-----AGVDSEWELWHAHMGHLNEDSLEKTQQGANGMPKTRPTVKTLCGGC-----MKGKQMVTHFPSRSRTTTSRPLELVHTDVMGPMKTKSKGGARYVLVFVDDYSRY 597          
BLAST of mRNA_F-serratus_M_contig753.18792.1 vs. uniprot
Match: A0A151SZQ0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SZQ0_CAJCA)

HSP 1 Score: 76.3 bits (186), Expect = 3.750e-11
Identity = 114/448 (25.45%), Postives = 187/448 (41.74%), Query Frame = 1
Query:    7 RNLKFHYR-AKGTREIIRLSHEINGKTMEPGS-----DPFKFTMEVDRLAADLHRLDDKSVTELR----------KYVIIVSSLSADFEMKCRILENNPAGLNRAEIERVVGNQYNRLLRQQQDSKALSASKGTVTANREKGKNR---------RLHHKFDSKCFNCGKKGHRAGDCRSVKKKGEKSGATDDREEGGD----SGSDRKEEWEPDSGATFHMSHTCAGMSAYKKASPGTNVEIAEGNILPVDRFGRIEVDLDQPGRTTKMVKMDDVACVPGPSRNLLSTVKAVEQWGKPLIY---YWYKNKAALGFPR---EESLFFK--LCPPALGAGASRDVMEVHRMLAHTSEDNSR--KTAGTIGIETTGQWGACETYFQFKAKR--YVVPKKTEERASVSGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSD 1227
            RN+ +H + AK T+E+++   ++  K             FK  ME  +  AD     ++  T+L           K +I++SSL   +++    +  + +G  + + + +     N   R+ Q   +  ++  T +  R   + +             K +  C+NC K GH   +CR+ KK+ E   A    EE  D    S S   ++W  DSGA+FH       M  Y     G  V +A+   L +   G + +        T    + DV  +PG  RNL+S V  ++  G  +++    W  +K A+   R     +L+      P    AGA       H  L H SE      K+ G +    +   G CE     K KR  ++   +T +   +  +    D+ GP    SLGG++Y + FVDDCTR   V F+K+KSD
Sbjct:   45 RNVAYHVKGAKSTKEVLQTLADMYEKPSAMNKVMLMKKLFKLQMEERKSVADHLNDFNQLTTQLASVNIEFDDEVKALILLSSLPDSWDVVVTSVSTS-SGKEKMKFDNIRDMMLNEETRRNQAGGSSGSALHTESRGRPDTRGKFXXXXXXXXXXXGKKEMVCWNCEKPGHMKSECRAPKKEKEGRTANAAIEETVDALLLSVSSSSDDWVMDSGASFHSCSRRDIMEPYTTGDFGM-VYLADNKPLKIVGKGDVRIKYANGSCWT----LRDVRHIPGLKRNLIS-VGQLDSDGFHIMFGDGKWKVSKGAMTLARGLKSGTLYMAGGSNPNIPFAGAVSQADLWHNRLGHMSEKGMSVLKSIGRLPELKSVDVGLCEHCVLGKQKRVSFMTTGRTPKMKKL--ELVHTDLWGPAPVISLGGSTYYMTFVDDCTRKVWVYFLKRKSD 483          
BLAST of mRNA_F-serratus_M_contig753.18792.1 vs. uniprot
Match: A0A151QPR6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QPR6_CAJCA)

HSP 1 Score: 76.3 bits (186), Expect = 3.920e-11
Identity = 114/448 (25.45%), Postives = 187/448 (41.74%), Query Frame = 1
Query:    7 RNLKFHYR-AKGTREIIRLSHEINGKTMEPGS-----DPFKFTMEVDRLAADLHRLDDKSVTELR----------KYVIIVSSLSADFEMKCRILENNPAGLNRAEIERVVGNQYNRLLRQQQDSKALSASKGTVTANREKGKNR---------RLHHKFDSKCFNCGKKGHRAGDCRSVKKKGEKSGATDDREEGGD----SGSDRKEEWEPDSGATFHMSHTCAGMSAYKKASPGTNVEIAEGNILPVDRFGRIEVDLDQPGRTTKMVKMDDVACVPGPSRNLLSTVKAVEQWGKPLIY---YWYKNKAALGFPR---EESLFFK--LCPPALGAGASRDVMEVHRMLAHTSEDNSR--KTAGTIGIETTGQWGACETYFQFKAKR--YVVPKKTEERASVSGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKSD 1227
            RN+ +H + AK T+E+++   ++  K             FK  ME  +  AD     ++  T+L           K +I++SSL   +++    +  + +G  + + + +     N   R+ Q   +  ++  T +  R   + +             K +  C+NC K GH   +CR+ KK+ E   A    EE  D    S S   ++W  DSGA+FH       M  Y     G  V +A+   L +   G + +        T    + DV  +PG  RNL+S V  ++  G  +++    W  +K A+   R     +L+      P    AGA       H  L H SE      K+ G +    +   G CE     K KR  ++   +T +   +  +    D+ GP    SLGG++Y + FVDDCTR   V F+K+KSD
Sbjct:   45 RNVAYHVKGAKSTKEVLQTLADMYEKPSAMNKVMLMKKLFKLQMEERKSVADHLNDFNQLTTQLASVNIEFDDEVKALILLSSLPDSWDVVVTSVSTS-SGKEKMKFDNIRDMMLNEETRRNQAGGSSGSALHTESRGRPDTRGKFXXXXXXXXXXXGKKEMVCWNCEKPGHMKSECRAPKKEKEGRTANAAIEETVDALLLSVSSSSDDWVMDSGASFHSCSRRDIMEPYTTGDFGM-VYLADNKPLKIVGKGDVRIKYANGSCWT----LRDVRHIPGLKRNLIS-VGQLDSDGFHIMFGDGKWKVSKGAMTLARGLKSGTLYMAGGSNPNIPFAGAVSQADLWHNRLGHMSEKGMSVLKSIGRLPELKSVDVGLCEHCVLGKQKRVSFMTTGRTPKMKKL--ELVHTDLWGPAPVISLGGSTYYMTFVDDCTRKVWVYFLKRKSD 483          
BLAST of mRNA_F-serratus_M_contig753.18792.1 vs. uniprot
Match: A0A1Y1N6B6_PHOPY (CCHC-type domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N6B6_PHOPY)

HSP 1 Score: 75.1 bits (183), Expect = 6.230e-11
Identity = 96/374 (25.67%), Postives = 154/374 (41.18%), Query Frame = 1
Query:  196 IVSSLSADFEMKCRILENNPAGLNRAEIERVVGNQYNRLLRQQQDSKALSASKGTV-TANREKGKNRRLHHKFDSKCFNCGKKGHRAGDCRSVKKKGEKSGATDDREE---GGDSGSDRKEE-------------WEPDSGATFHMSHTCAGMSAYKKASPGTNVEIAEGNILPVDRFGRIEVDLDQPGRTTKMVKMDDVACVPGPSRNLLS---------TVKAVEQWGKPLIYYWYKNKAALGFPREESLFFKLCPPALGAGASRDVMEVHRMLAHTSEDNSRKTA--GTI---GIETTGQWGACETYFQFKAKRYVVPKKTEERASVSGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKVVKFVKKKS 1224
            I++ +     MK R      A L+  E ++ + N   RL+ ++       AS+  + T+N    ++     K    C+NC KKGH + DCR+ +K+   + +  +  E   G +  +   E              W  DSGA+ HMS     +    +     NV++     L V   G IE++        K + + +V  VPG  RNL S         T+    Q+   L     K +A  G      L F+     L      ++   H  L H +    +K    GTI    +    +   C+   Q+  +  +  +K++ R S  G+    D+ GPM   SLGG  Y V+F DDCT +++V FVK KS
Sbjct:  147 ILTKIIGTLPMKYRNFRQ--AWLSLDETKQTIQNLTARLMDEESSLSVHEASESALLTSNASNSRSNPKSKKSLVTCYNCRKKGHFSKDCRAPRKQKHSAHSNTNVMETNLGSNYSAFNVENQKLMEEIQTDELGWTLDSGASAHMS-PFRNLFTDLETVTEFNVKLGNNQELAVKGVGSIEIECLVNYSWVKSI-ITNVWYVPGLRRNLFSEGAITKKGMTIVKENQYANILESGQLKARAVRGSNNLYRLMFRTVNRELNVVCGDNLRLWHERLGHVNVQTIKKMVVNGTIVGVNMNNVDENFVCDGC-QYGKQHKLAFRKSQPRNSKPGEYIHSDLCGPMSVPSLGGALYFVLFKDDCTGYRIVYFVKHKS 515          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig753.18792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3IEW9_9STRA1.700e-2827.98Uncharacterized protein n=1 Tax=Phytophthora rubi ... [more]
A0A6A3KTF1_9STRA2.300e-2827.98Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A6A4BQ03_9STRA5.270e-2727.92Retrovirus-related Pol polyprotein from transposon... [more]
A0A1Y1K2V0_PHOPY1.570e-1425.06Uncharacterized protein n=1 Tax=Photinus pyralis T... [more]
A0A5D6Y8Z1_9STRA7.160e-1329.51Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A0J7K4F4_LASNI2.630e-1227.36Rna-dependent dna polymerase n=1 Tax=Lasius niger ... [more]
A0A225V993_9STRA1.030e-1125.00Integrase, catalytic core protein n=1 Tax=Phytopht... [more]
A0A151SZQ0_CAJCA3.750e-1125.45Retrovirus-related Pol polyprotein from transposon... [more]
A0A151QPR6_CAJCA3.920e-1125.45Retrovirus-related Pol polyprotein from transposon... [more]
A0A1Y1N6B6_PHOPY6.230e-1125.67CCHC-type domain-containing protein (Fragment) n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig753contigF-serratus_M_contig753:24323..25840 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score120.9
Seed ortholog evalue1.4e-24
Seed eggNOG ortholog164328.Phyra85763
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons3
Model size1227
Cds size1227
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig753.18792.1prot_F-serratus_M_contig753.18792.1Fucus serratus malepolypeptideF-serratus_M_contig753 24323..25840 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932271.5657852-CDS-F-serratus_M_contig753:24322..248551622932271.5657852-CDS-F-serratus_M_contig753:24322..24855Fucus serratus maleCDSF-serratus_M_contig753 24323..24855 +
1690964228.4578073-CDS-F-serratus_M_contig753:24322..248551690964228.4578073-CDS-F-serratus_M_contig753:24322..24855Fucus serratus maleCDSF-serratus_M_contig753 24323..24855 +
1622932271.5843842-CDS-F-serratus_M_contig753:25041..254001622932271.5843842-CDS-F-serratus_M_contig753:25041..25400Fucus serratus maleCDSF-serratus_M_contig753 25042..25400 +
1690964228.4697666-CDS-F-serratus_M_contig753:25041..254001690964228.4697666-CDS-F-serratus_M_contig753:25041..25400Fucus serratus maleCDSF-serratus_M_contig753 25042..25400 +
1622932271.6039348-CDS-F-serratus_M_contig753:25505..258401622932271.6039348-CDS-F-serratus_M_contig753:25505..25840Fucus serratus maleCDSF-serratus_M_contig753 25506..25840 +
1690964228.4803472-CDS-F-serratus_M_contig753:25505..258401690964228.4803472-CDS-F-serratus_M_contig753:25505..25840Fucus serratus maleCDSF-serratus_M_contig753 25506..25840 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig753.18792.1

>prot_F-serratus_M_contig753.18792.1 ID=prot_F-serratus_M_contig753.18792.1|Name=mRNA_F-serratus_M_contig753.18792.1|organism=Fucus serratus male|type=polypeptide|length=409bp
AWRNLKFHYRAKGTREIIRLSHEINGKTMEPGSDPFKFTMEVDRLAADLH
RLDDKSVTELRKYVIIVSSLSADFEMKCRILENNPAGLNRAEIERVVGNQ
YNRLLRQQQDSKALSASKGTVTANREKGKNRRLHHKFDSKCFNCGKKGHR
AGDCRSVKKKGEKSGATDDREEGGDSGSDRKEEWEPDSGATFHMSHTCAG
MSAYKKASPGTNVEIAEGNILPVDRFGRIEVDLDQPGRTTKMVKMDDVAC
VPGPSRNLLSTVKAVEQWGKPLIYYWYKNKAALGFPREESLFFKLCPPAL
GAGASRDVMEVHRMLAHTSEDNSRKTAGTIGIETTGQWGACETYFQFKAK
RYVVPKKTEERASVSGQRFFVDVGGPMKHSSLGGNSYVVIFVDDCTRFKV
VKFVKKKSD
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mRNA from alignment at F-serratus_M_contig753:24323..25840+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig753.18792.1 ID=mRNA_F-serratus_M_contig753.18792.1|Name=mRNA_F-serratus_M_contig753.18792.1|organism=Fucus serratus male|type=mRNA|length=1518bp|location=Sequence derived from alignment at F-serratus_M_contig753:24323..25840+ (Fucus serratus male)
GCGTGGAGAAATCTTAAATTTCACTATAGAGCAAAAGGAACCAGGGAAAT TATTCGTCTGTCCCATGAAATCAACGGAAAAACAATGGAACCCGGTAGTG ACCCATTTAAGTTTACGATGGAAGTTGACAGGTTGGCAGCAGACCTTCAC CGTTTAGACGACAAGTCCGTAACCGAACTCAGAAAGTACGTGATCATTGT ATCTAGCCTATCTGCTGATTTTGAAATGAAGTGTCGCATACTAGAGAACA ACCCTGCTGGTCTTAACAGGGCTGAGATTGAGCGTGTTGTAGGAAATCAG TACAACAGACTTCTCAGGCAGCAACAGGACTCGAAGGCATTGTCAGCATC GAAGGGCACCGTCACGGCAAATCGCGAAAAGGGGAAGAACAGAAGACTCC ACCACAAGTTCGATAGCAAATGCTTCAATTGCGGGAAGAAAGGTCACCGC GCTGGAGACTGCAGGAGCGTGAAAAAAAAGGGTGAAAAATCCGGAGCTAC CGACGACAGGGAGGAGGGCGGGGACAGCGGTAGGTGCTACATTTGCGGGA GTGAGGATCACCTTGCGCATAGGCACTGTGGACTGTGCAAGAGCCTTGAG CACCGGACGCGAGACTGTGAGGAGCGCGGAGCTGAAAAGGGCGCAACGCT GGCAAAACTGACTGTGTCGGTGGTTCCTGAGGTGAGAACAGTGGCGGCAA TGGTGGGAACAGCTCGTAGCGATAGGAAGGAAGAATGGGAACCAGATTCC GGCGCCACATTCCACATGTCGCACACCTGCGCCGGAATGTCTGCTTATAA AAAGGCGTCACCGGGGACAAACGTTGAGATCGCCGAAGGTAACATTCTAC CGGTGGACAGATTCGGGAGAATCGAGGTGGATCTGGACCAACCGGGGCGT ACAACCAAGATGGTGAAGATGGACGATGTCGCGTGTGTGCCGGGACCCTC CCGAAATCTGCTGTCTACTGTCAAAGCAGTGGAGCAATGGGGGAAACCGT TAATCTACTACTGGTATAAAAATAAAGCCGCTTTGGGGTTCCCGAGGGAG GAATCGCTTTTTTTCAAACTCTGCCCCCGTAGGGGACTGTTTTCAGCTAC AGGCGCGAGGCGGGTCCCGAGGCAGGAGGCGGCTCTAGAGGCAAATCTGA CGGAGAACAGGTTGGTAAAGATCGCTTCGGGAGCGGCGCTGGGAGCGGGC GCATCCCGTGACGTCATGGAGGTCCATCGCATGCTTGCGCACACGAGCGA GGACAATTCAAGAAAGACGGCCGGGACGATAGGGATCGAGACGACGGGCC AGTGGGGGGCGTGTGAGACATACTTCCAATTTAAGGCGAAGCGATATGTC GTGCCAAAGAAAACAGAAGAACGGGCGAGCGTGAGCGGGCAGCGGTTCTT CGTCGACGTGGGCGGGCCGATGAAGCACTCGAGTCTCGGCGGGAACAGCT ACGTCGTCATTTTTGTGGACGACTGCACCCGCTTCAAGGTTGTAAAGTTC GTAAAGAAGAAGAGTGAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig753:24323..25840+

>mRNA_F-serratus_M_contig753.18792.1 ID=mRNA_F-serratus_M_contig753.18792.1|Name=mRNA_F-serratus_M_contig753.18792.1|organism=Fucus serratus male|type=CDS|length=2454bp|location=Sequence derived from alignment at F-serratus_M_contig753:24323..25840+ (Fucus serratus male)
GCGTGGAGAAATCTTAAATTTCACTATAGAGCAAAAGGAACCAGGGAAAT
TATTCGTCTGTCCCATGAAATCAACGGAAAAACAATGGAACCCGGTAGTG
ACCCATTTAAGTTTACGATGGAAGTTGACAGGTTGGCAGCAGACCTTCAC
CGTTTAGACGACAAGTCCGTAACCGAACTCAGAAAGTACGTGATCATTGT
ATCTAGCCTATCTGCTGATTTTGAAATGAAGTGTCGCATACTAGAGAACA
ACCCTGCTGGTCTTAACAGGGCTGAGATTGAGCGTGTTGTAGGAAATCAG
TACAACAGACTTCTCAGGCAGCAACAGGACTCGAAGGCATTGTCAGCATC
GAAGGGCACCGTCACGGCAAATCGCGAAAAGGGGAAGAACAGAAGACTCC
ACCACAAGTTCGATAGCAAATGCTTCAATTGCGGGAAGAAAGGTCACCGC
GCTGGAGACTGCAGGAGCGTGAAAAAAAAGGGTGAAAAATCCGGAGCTAC
CGACGACAGGGAGGAGGGCGGGGACAGCGGTAGGCGTGGAGAAATCTTAA
ATTTCACTATAGAGCAAAAGGAACCAGGGAAATTATTCGTCTGTCCCATG
AAATCAACGGAAAAACAATGGAACCCGGTAGTGACCCATTTAAGTTTACG
ATGGAAGTTGACAGGTTGGCAGCAGACCTTCACCGTTTAGACGACAAGTC
CGTAACCGAACTCAGAAAGTACGTGATCATTGTATCTAGCCTATCTGCTG
ATTTTGAAATGAAGTGTCGCATACTAGAGAACAACCCTGCTGGTCTTAAC
AGGGCTGAGATTGAGCGTGTTGTAGGAAATCAGTACAACAGACTTCTCAG
GCAGCAACAGGACTCGAAGGCATTGTCAGCATCGAAGGGCACCGTCACGG
CAAATCGCGAAAAGGGGAAGAACAGAAGACTCCACCACAAGTTCGATAGC
AAATGCTTCAATTGCGGGAAGAAAGGTCACCGCGCTGGAGACTGCAGGAG
CGTGAAAAAAAAGGGTGAAAAATCCGGAGCTACCGACGACAGGGAGGAGG
GCGGGGACAGCGGTAGCGATAGGAAGGAAGAATGGGAACCAGATTCCGGC
GCCACATTCCACATGTCGCACACCTGCGCCGGAATGTCTGCTTATAAAAA
GGCGTCACCGGGGACAAACGTTGAGATCGCCGAAGGTAACATTCTACCGG
TGGACAGATTCGGGAGAATCGAGGTGGATCTGGACCAACCGGGGCGTACA
ACCAAGATGGTGAAGATGGACGATGTCGCGTGTGTGCCGGGACCCTCCCG
AAATCTGCTGTCTACTGTCAAAGCAGTGGAGCAATGGGGGAAACCGTTAA
TCTACTACTGGTATAAAAATAAAGCCGCTTTGGGGTTCCCGAGGGAGGAA
TCGCTTTTTTTCAAACTCTGCCCCCCGATAGGAAGGAAGAATGGGAACCA
GATTCCGGCGCCACATTCCACATGTCGCACACCTGCGCCGGAATGTCTGC
TTATAAAAAGGCGTCACCGGGGACAAACGTTGAGATCGCCGAAGGTAACA
TTCTACCGGTGGACAGATTCGGGAGAATCGAGGTGGATCTGGACCAACCG
GGGCGTACAACCAAGATGGTGAAGATGGACGATGTCGCGTGTGTGCCGGG
ACCCTCCCGAAATCTGCTGTCTACTGTCAAAGCAGTGGAGCAATGGGGGA
AACCGTTAATCTACTACTGGTATAAAAATAAAGCCGCTTTGGGGTTCCCG
AGGGAGGAATCGCTTTTTTTCAAACTCTGCCCCCCGGCGCTGGGAGCGGG
CGCATCCCGTGACGTCATGGAGGTCCATCGCATGCTTGCGCACACGAGCG
AGGACAATTCAAGAAAGACGGCCGGGACGATAGGGATCGAGACGACGGGC
CAGTGGGGGGCGTGTGAGACATACTTCCAATTTAAGGCGAAGCGATATGT
CGTGCCAAAGAAAACAGAAGAACGGGCGAGCGTGAGCGGGCAGCGGTTCT
TCGTCGACGTGGGCGGGCCGATGAAGCACTCGAGTCTCGGCGGGAACAGC
TACGTCGTCATTTTTGTGGACGACTGCACCCGCTTCAAGGTTGTAAAGTT
CGTAAAGAAGAAGAGTGACCGGCGCTGGGAGCGGGCGCATCCCGTGACGT
CATGGAGGTCCATCGCATGCTTGCGCACACGAGCGAGGACAATTCAAGAA
AGACGGCCGGGACGATAGGGATCGAGACGACGGGCCAGTGGGGGGCGTGT
GAGACATACTTCCAATTTAAGGCGAAGCGATATGTCGTGCCAAAGAAAAC
AGAAGAACGGGCGAGCGTGAGCGGGCAGCGGTTCTTCGTCGACGTGGGCG
GGCCGATGAAGCACTCGAGTCTCGGCGGGAACAGCTACGTCGTCATTTTT
GTGGACGACTGCACCCGCTTCAAGGTTGTAAAGTTCGTAAAGAAGAAGAG
TGAC
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