mRNA_F-serratus_M_contig749.18735.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig749.18735.1
Unique NamemRNA_F-serratus_M_contig749.18735.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig749.18735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig749contigF-serratus_M_contig749:306413..307238 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size828
Cds size825
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932255.4208972-CDS-F-serratus_M_contig749:306412..3072371622932255.4208972-CDS-F-serratus_M_contig749:306412..307237Fucus serratus maleCDSF-serratus_M_contig749 306413..307237 +
1690964220.6413786-CDS-F-serratus_M_contig749:306412..3072371690964220.6413786-CDS-F-serratus_M_contig749:306412..307237Fucus serratus maleCDSF-serratus_M_contig749 306413..307237 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig749.18735.1prot_F-serratus_M_contig749.18735.1Fucus serratus malepolypeptideF-serratus_M_contig749 306413..307237 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig749.18735.1

>prot_F-serratus_M_contig749.18735.1 ID=prot_F-serratus_M_contig749.18735.1|Name=mRNA_F-serratus_M_contig749.18735.1|organism=Fucus serratus male|type=polypeptide|length=275bp
SVGVGSKAPEEPSGSASVHKVPEDVPSIGKAEVSAPDVSGSVPSASISAP
GVEINECVPSVDADKNAPNVTMSGPNVGVPKSDVSVPAPYVSDINESASG
ANTTAREVTDEVPPAKMGGSLYSADVPDISESASAVNIAAREVTDVIPPP
MMGGSLPSADFGGKDSVVPPGVTMSTSAPAEDVSAPVVKVDVAAPDVEVG
VSAPSLGAGGKAPDVADIDESGSDVNNTDEIPSAKLDNSLPAADVKAPES
PSAGAGMSEAVLGFIGGLFTSKNTD
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mRNA from alignment at F-serratus_M_contig749:306413..307238+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig749.18735.1 ID=mRNA_F-serratus_M_contig749.18735.1|Name=mRNA_F-serratus_M_contig749.18735.1|organism=Fucus serratus male|type=mRNA|length=826bp|location=Sequence derived from alignment at F-serratus_M_contig749:306413..307238+ (Fucus serratus male)
TCTGTGGGCGTGGGCAGCAAGGCGCCCGAGGAGCCGTCAGGGAGCGCGTC
CGTTCATAAAGTGCCTGAGGATGTTCCTTCGATTGGGAAGGCGGAAGTGT
CGGCGCCTGACGTGAGCGGGTCGGTCCCTTCCGCGAGCATCTCGGCGCCG
GGCGTTGAGATTAATGAGTGTGTCCCTTCGGTGGACGCAGACAAAAATGC
GCCCAACGTCACCATGTCGGGGCCAAACGTCGGTGTACCAAAGTCAGACG
TAAGCGTGCCAGCTCCGTACGTATCGGATATCAACGAGTCTGCGTCAGGC
GCGAACACCACCGCACGGGAGGTGACCGACGAAGTCCCGCCCGCGAAGAT
GGGTGGTTCTCTGTATTCGGCGGACGTGCCGGATATCAGCGAGTCTGCGT
CAGCCGTGAACATTGCCGCACGTGAGGTGACCGACGTAATCCCGCCCCCA
ATGATGGGTGGTTCTCTGCCTTCGGCCGACTTCGGTGGCAAGGATTCTGT
TGTCCCGCCCGGGGTAACTATGAGCACGTCTGCCCCAGCTGAAGATGTGT
CGGCGCCAGTTGTGAAGGTCGACGTCGCTGCGCCGGACGTGGAGGTTGGT
GTGTCGGCGCCTTCACTGGGTGCAGGAGGCAAGGCGCCCGACGTGGCGGA
TATCGACGAGTCCGGGTCAGACGTCAACAATACTGACGAAATCCCGTCAG
CGAAGTTGGATAATTCGCTGCCTGCCGCCGACGTCAAGGCTCCCGAGTCG
CCGTCCGCGGGAGCGGGCATGTCGGAGGCAGTATTGGGTTTCATCGGTGG
CCTGTTCACATCCAAGAATACGGATG
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Coding sequence (CDS) from alignment at F-serratus_M_contig749:306413..307238+

>mRNA_F-serratus_M_contig749.18735.1 ID=mRNA_F-serratus_M_contig749.18735.1|Name=mRNA_F-serratus_M_contig749.18735.1|organism=Fucus serratus male|type=CDS|length=1650bp|location=Sequence derived from alignment at F-serratus_M_contig749:306413..307238+ (Fucus serratus male)
TCTGTGGGCGTGGGCAGCAAGGCGCCCGAGGAGCCGTCAGGGAGCGCGTC
CGTTCATAAAGTGCCTGAGGATGTTCCTTCGATTGGGAAGGCGGAAGTGT
CGGCGCCTGACGTGAGCGGGTCGGTCCCTTCCGCGAGCATCTCGGCGCCG
GGCGTTGAGATTAATGAGTGTGTCCCTTCGGTGGACGCAGACAAAAATGC
GCCCAACGTCACCATGTCGGGGCCAAACGTCGGTGTACCAAAGTCAGACG
TAAGCGTGCCAGCTCCGTACGTATCGGATATCAACGAGTCTGCGTCAGGC
GCGAACACCACCGCACGGGAGGTGACCGACGAAGTCCCGCCCGCGAAGAT
GGGTGGTTCTCTGTATTCGGCGGACGTGCCGGATATCAGCGAGTCTGCGT
CAGCCGTGAACATTGCCGCACGTGAGGTGACCGACGTAATCCCGCCCCCA
ATGATGGGTGGTTCTCTGCCTTCGGCCGACTTCGGTGGCAAGGATTCTGT
TGTCCCGCCCGGGGTAACTATGAGCACGTCTGCCCCAGCTGAAGATGTGT
CGGCGCCAGTTGTGAAGGTCGACGTCGCTGCGCCGGACGTGGAGGTTGGT
GTGTCGGCGCCTTCACTGGGTGCAGGAGGCAAGGCGCCCGACGTGGCGGA
TATCGACGAGTCCGGGTCAGACGTCAACAATACTGACGAAATCCCGTCAG
CGAAGTTGGATAATTCGCTGCCTGCCGCCGACGTCAAGGCTCCCGAGTCG
CCGTCCGCGGGAGCGGGCATGTCGGAGGCAGTATTGGGTTTCATCGGTGG
CCTGTTCACATCCAAGAATACGGATTCTGTGGGCGTGGGCAGCAAGGCGC
CCGAGGAGCCGTCAGGGAGCGCGTCCGTTCATAAAGTGCCTGAGGATGTT
CCTTCGATTGGGAAGGCGGAAGTGTCGGCGCCTGACGTGAGCGGGTCGGT
CCCTTCCGCGAGCATCTCGGCGCCGGGCGTTGAGATTAATGAGTGTGTCC
CTTCGGTGGACGCAGACAAAAATGCGCCCAACGTCACCATGTCGGGGCCA
AACGTCGGTGTACCAAAGTCAGACGTAAGCGTGCCAGCTCCGTACGTATC
GGATATCAACGAGTCTGCGTCAGGCGCGAACACCACCGCACGGGAGGTGA
CCGACGAAGTCCCGCCCGCGAAGATGGGTGGTTCTCTGTATTCGGCGGAC
GTGCCGGATATCAGCGAGTCTGCGTCAGCCGTGAACATTGCCGCACGTGA
GGTGACCGACGTAATCCCGCCCCCAATGATGGGTGGTTCTCTGCCTTCGG
CCGACTTCGGTGGCAAGGATTCTGTTGTCCCGCCCGGGGTAACTATGAGC
ACGTCTGCCCCAGCTGAAGATGTGTCGGCGCCAGTTGTGAAGGTCGACGT
CGCTGCGCCGGACGTGGAGGTTGGTGTGTCGGCGCCTTCACTGGGTGCAG
GAGGCAAGGCGCCCGACGTGGCGGATATCGACGAGTCCGGGTCAGACGTC
AACAATACTGACGAAATCCCGTCAGCGAAGTTGGATAATTCGCTGCCTGC
CGCCGACGTCAAGGCTCCCGAGTCGCCGTCCGCGGGAGCGGGCATGTCGG
AGGCAGTATTGGGTTTCATCGGTGGCCTGTTCACATCCAAGAATACGGAT
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