mRNA_F-serratus_M_contig737.18607.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig737.18607.1 vs. uniprot
Match: D8LIW6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW6_ECTSI) HSP 1 Score: 196 bits (499), Expect = 3.400e-48 Identity = 134/271 (49.45%), Postives = 164/271 (60.52%), Query Frame = 3
Query: 15 VDLKTILRLPELKAQITEGDVAIEDLEGAWLEACAVEGDETIDPVNTSG-----RYRRSWGVCSELAFEGFVRFLSLCEAKTPLPKVHCTVLKTVGPVCRAATEASARARPRIGGAEIGRDLLVARQRMAGLLRATLTVHYRDHGSKKEEGATGGLAPADHGQPPDPDWPRGEALHSAMVRAAVSEGLVRRTPEALKELVRVGVYRVSE----------KAFL--GLSLSTRLSHDDLMRTGI-LRGATPGEVALERASAAESVRRCLERR 773
V L+++L+L E+KAQI EGDV +EDLE AWLEACAV+G ++DP + G R SWGVC+EL+FEGFV FL LCE K L T L T ATEAS + GRDL+ AR RM GLLRATLTVH R G ++EE +H P D + P GE LHS+MVRAAV EGL P+ L EL+R GVY+ SE KA L GL L + SH DL+R+GI L+ TPG++A ERA AA V R L++R
Sbjct: 39 VGLRSVLKLKEVKAQIAEGDVYVEDLESAWLEACAVKGVSSVDPEDGKGGTHHVHQRSSWGVCTELSFEGFVHFLRLCEEKASLS----TDLAT-------ATEASPK------DPATGRDLVAARHRMVGLLRATLTVHQRGGGGEEEE--------IEH--PADLNAPLGETLHSSMVRAAVEEGLAHHNPDVLHELMRTGVYKESEEGVQLDRDEKKASLRHGL-LDRKFSHHDLVRSGIILKEQTPGQLAGERALAASRVSRHLQQR 281
BLAST of mRNA_F-serratus_M_contig737.18607.1 vs. uniprot
Match: A0A835YKI0_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI0_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.210e-9 Identity = 60/176 (34.09%), Postives = 88/176 (50.00%), Query Frame = 3
Query: 15 VDLKTILRLPELKAQITEGDVAIEDLEGAWLEACAVEGDETIDPVNTSGRYRRSWGVCSELAFEGFVRFLSLCEAKTPL-----PKVHCTVLKTVGPVCRAATEASARARPRIGGAEIGRDLLVARQRMAGLLRATLTVHYRDHGSKKEEGATGGLAPADHGQPPDPDWPRGEALH 527
+D +L++ E+ +Q+ GD+ ED+E WLEA + G +++P G SWGV + L F GF+ + +CE KT +V T + V V AA A+ RAR +I +ARQ +AGL+RATL +H R GG+A A G+ D +ALH
Sbjct: 63 LDFDALLKVDEVASQLAAGDLCTEDVEAMWLEAVSCPGATSLEPGAEMGP--SSWGVRTPLNFRGFLELIRVCEEKTASLGAQPGEVAATYERPVQLVAGAA--ATQRARWQIA---------MARQHLAGLMRATLVLHGR-----------GGVASAGGGEA---DGAAAKALH 211 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig737.18607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig737.18607.1 >prot_F-serratus_M_contig737.18607.1 ID=prot_F-serratus_M_contig737.18607.1|Name=mRNA_F-serratus_M_contig737.18607.1|organism=Fucus serratus male|type=polypeptide|length=515bp MAGLLRATLTVHYRDHGSKKEEGATGGLAPADHGQPPDPDWPRGEALHSAback to top mRNA from alignment at F-serratus_M_contig737:113792..129556+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig737.18607.1 ID=mRNA_F-serratus_M_contig737.18607.1|Name=mRNA_F-serratus_M_contig737.18607.1|organism=Fucus serratus male|type=mRNA|length=15765bp|location=Sequence derived from alignment at F-serratus_M_contig737:113792..129556+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig737:113792..129556+ >mRNA_F-serratus_M_contig737.18607.1 ID=mRNA_F-serratus_M_contig737.18607.1|Name=mRNA_F-serratus_M_contig737.18607.1|organism=Fucus serratus male|type=CDS|length=3090bp|location=Sequence derived from alignment at F-serratus_M_contig737:113792..129556+ (Fucus serratus male)back to top |