mRNA_F-serratus_M_contig736.18602.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig736.18602.1
Unique NamemRNA_F-serratus_M_contig736.18602.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig736.18602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig736contigF-serratus_M_contig736:282394..285753 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size1651
Cds size1650
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig736.18602.1prot_F-serratus_M_contig736.18602.1Fucus serratus malepolypeptideF-serratus_M_contig736 282394..285753 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932229.9496124-CDS-F-serratus_M_contig736:282393..2828191622932229.9496124-CDS-F-serratus_M_contig736:282393..282819Fucus serratus maleCDSF-serratus_M_contig736 282394..282819 +
1690964208.8149476-CDS-F-serratus_M_contig736:282393..2828191690964208.8149476-CDS-F-serratus_M_contig736:282393..282819Fucus serratus maleCDSF-serratus_M_contig736 282394..282819 +
1622932229.9713552-CDS-F-serratus_M_contig736:283024..2830981622932229.9713552-CDS-F-serratus_M_contig736:283024..283098Fucus serratus maleCDSF-serratus_M_contig736 283025..283098 +
1690964208.8245285-CDS-F-serratus_M_contig736:283024..2830981690964208.8245285-CDS-F-serratus_M_contig736:283024..283098Fucus serratus maleCDSF-serratus_M_contig736 283025..283098 +
1622932229.9911869-CDS-F-serratus_M_contig736:283385..2835911622932229.9911869-CDS-F-serratus_M_contig736:283385..283591Fucus serratus maleCDSF-serratus_M_contig736 283386..283591 +
1690964208.83398-CDS-F-serratus_M_contig736:283385..2835911690964208.83398-CDS-F-serratus_M_contig736:283385..283591Fucus serratus maleCDSF-serratus_M_contig736 283386..283591 +
1622932230.0088418-CDS-F-serratus_M_contig736:284070..2841951622932230.0088418-CDS-F-serratus_M_contig736:284070..284195Fucus serratus maleCDSF-serratus_M_contig736 284071..284195 +
1690964208.8434534-CDS-F-serratus_M_contig736:284070..2841951690964208.8434534-CDS-F-serratus_M_contig736:284070..284195Fucus serratus maleCDSF-serratus_M_contig736 284071..284195 +
1622932230.0253065-CDS-F-serratus_M_contig736:284475..2852581622932230.0253065-CDS-F-serratus_M_contig736:284475..285258Fucus serratus maleCDSF-serratus_M_contig736 284476..285258 +
1690964208.8531435-CDS-F-serratus_M_contig736:284475..2852581690964208.8531435-CDS-F-serratus_M_contig736:284475..285258Fucus serratus maleCDSF-serratus_M_contig736 284476..285258 +
1622932230.0427928-CDS-F-serratus_M_contig736:285717..2857531622932230.0427928-CDS-F-serratus_M_contig736:285717..285753Fucus serratus maleCDSF-serratus_M_contig736 285718..285753 +
1690964208.861887-CDS-F-serratus_M_contig736:285717..2857531690964208.861887-CDS-F-serratus_M_contig736:285717..285753Fucus serratus maleCDSF-serratus_M_contig736 285718..285753 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig736.18602.1

>prot_F-serratus_M_contig736.18602.1 ID=prot_F-serratus_M_contig736.18602.1|Name=mRNA_F-serratus_M_contig736.18602.1|organism=Fucus serratus male|type=polypeptide|length=550bp
SILPSIDRSQVSAVSQASEIPLTTSSCWLRSTPIPATSLARRGGRISTTT
TSLLSPTGGRQRHFSSPEEYFCLQRGNSGGGDNGDVGDLGDFRSFQKITE
QPNMASREVVEKERGASVNVAGGAWFSCIEQGENDELDRLKKKVAGIREQ
YSEALGNSSNQVESVQRNEVKVLRCSLVALRAALSSEKRRRLEAIARFEG
EVDWLRRESDRAVRRAKEAERQKDAAHARLVEKDADDFSRSYALEKRATT
LEERSRVTAVRNERLRDRLDAVLGDVEEMLQYNKDLIAELEACRSSQEAL
IAQKLTSMEENAAERERLARELTDARARITSLQNDEASLHKAHRTVIAEA
ESLRRSLAWARREAVEARATASLVAEATIISEVSPGAATAVAGAVREAEQ
TISGKEAARRRGGEGADHPTETCNRWNEAAFKRTAEASAAVERDDWVTRS
RGFEDEAKILVDALQTPGEESAKAREGLMAMVIEIAESLARARGELARVG
QLREEEAASAREREAGLRDELKTAQVMSTPFLGEERFRDAARRSLLNLAR
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mRNA from alignment at F-serratus_M_contig736:282394..285753+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig736.18602.1 ID=mRNA_F-serratus_M_contig736.18602.1|Name=mRNA_F-serratus_M_contig736.18602.1|organism=Fucus serratus male|type=mRNA|length=3360bp|location=Sequence derived from alignment at F-serratus_M_contig736:282394..285753+ (Fucus serratus male)
TCGATATTACCATCAATTGATAGATCGCAGGTCTCGGCGGTATCGCAGGC
TTCCGAGATACCGCTGACCACATCCAGCTGCTGGCTGCGCTCCACGCCGA
TCCCTGCGACCAGTCTCGCGCGACGAGGCGGAAGGATCAGTACCACGACG
ACGTCGTTGTTGTCGCCTACGGGAGGACGGCAACGTCACTTTTCTTCGCC
TGAAGAGTATTTCTGCCTGCAGCGTGGCAACAGTGGCGGCGGCGATAACG
GTGACGTCGGCGACTTGGGCGATTTTAGAAGTTTTCAGAAAATAACTGAG
CAGCCGAACATGGCTTCGCGTGAAGTGGTGGAAAAAGAGAGGGGCGCGTC
GGTGAATGTCGCAGGAGGCGCATGGTTCTCGTGTATCGAGCAAGGAGAGA
ACGACGAGCTCGATCGCCTCAAGAAGGTGCCACACGTCGATTAGAAGCTG
GTGCAGTAACACGAACGACCTTCTTTCAGGAGGTTGCCAATGCGCTTCGC
GACTTCACCTCACCGTTTCGCACCTCAAGAAACTGTAAGACGAAAAGAAT
CGTGCTCTTTAGAAGTGACTTGGTTTGCGATTGACGATTTCATGGTGACG
CATCGCTCGCTTGCGTGAATTCCCCGCGCAGAAGGTCGCAGGGATCCGCG
AGCAGTACTCCGAAGCGCTGGGCAATAGTTCGAATCAGGTCGAATCTGTG
CAGCGGTAAGCTTCAATCGGGTTATTCAGCACCTTTCGACGGATTTCGTA
AGAGTTTGGGGGATTTTGCGTCCTCTGTCCATTTGCGCTCCTTCCTTTCC
ATAAACATTTTTTTGCCGGTAAGCTCCACCCGTACCTTAAATAGCATCGA
CCGACCGACGTCGCATGGTAACAGGCCTTCTATTTCCGGAACTGTTGCCA
CCCCCTTCCCCCCCAGTCTTCCCGCCTCTGCCGTGCGCAACTCCCGTCAT
CCGTGTATTTAGTCATTGCTCCTATTGTTGCTCCTACTGCAGGAATGAAG
TCAAGGTACTACGGTGCTCGTTGGTTGCGCTCAGGGCGGCGCTCTCATCG
GAGAAGAGGCGTCGCTTGGAGGCCATAGCGCGGTTCGAGGGTGAGGTGGA
CTGGCTTCGACGAGAGTCCGACCGAGCCGTAAGACGGGCGAAAGAGGCGG
AGAGGCAAAAGGATGCCGCGCACGCAAGGCTCGTGGAGAAAGACGCTGGT
GATAGTTACGGTCGTATTTGGCATGGCCGATGCGGCGGCAGACCTGGGCG
GGCAGGGTGTAGGGCTCATGTTCTAGACATCTGAAACCTCCACACTTTTG
ATTCGGCTGAGTCTTTAAAGATACAGCATTGTGATTGAGTGTTGAAGGAA
TGACGCGCACACAGAGCTGCCGCTGCTGCTGCGGTACGGCTGAGACTCGT
ACGTTTTTCTCACCTAATTTTGTCAAAAAGAGTATTTGGTTCTCCGTGGA
ATGGGCGCTAAGCATCAGCTCGACGGAGTTGGATTCTCTAGCGAGTTATC
CTACGCACCAAAACGCCGCGCTTAGTGTCAATGATTACGTTTGCCTACCC
CGCCTCGTCCAGCCTCATCCCCGATCTATTTTTTAAACATCGCGTTTTGA
GATGCGTACCCTACCCCGACCTTTGCGTGCTCGTACCCCGACGTGATATG
TTTTGACCTGTCGCGGCGTCTCCTTAGACGACTTCAGCAGGAGCTATGCC
CTCGAAAAGAGAGCCACGACTTTGGAGGAGCGGTCTAGGGTGACAGCGGT
GAGGAACGAACGCCTGCGCGACCGCCTCGACGCCGTCTTGGGAGACGTTG
AGGTGAGTTGACGCAAGGATCTATCACACTCCAGTAGGGACCCTGTTAGA
GTCCTAAACTACCCAGCGCTCCCCGATTCAAATCGCAATCGTAAACATTG
GAACCATCTACGCCCGAAACTTACTCAGGCGTAGGGCGTTGTGGAAAACA
AGAGATCTCTGCTCGTGTCCTTTAGCGTTCTGGTGTTGCTGATGATAGAC
CCACCCACTCCTTTCGTCCACGAACTTTCGCTGCACGGCGGACTTTCTCC
CCCCCCCTCTCCGATAAACCGGACGGAAGTAGGAGATGCTTCAGTACAAC
AAGGACTTGATTGCCGAACTCGAGGCCTGCCGCAGCTCCCAGGAAGCCCT
GATCGCCCAAAAGTTGACCTCGATGGAAGAGAACGCCGCGGAGAGGGAAC
GGCTCGCCAGAGAGCTGACGGATGCCAGGGCTAGAATAACTTCGCTTCAA
AACGACGAGGCGTCACTGCACAAGGCGCACCGTACCGTCATAGCTGAAGC
GGAATCGCTGCGGCGATCGCTCGCATGGGCGCGTCGCGAGGCGGTCGAAG
CAAGGGCGACCGCCTCGCTCGTCGCAGAGGCCACGATTATTTCCGAGGTT
TCTCCTGGTGCTGCTACTGCTGTCGCGGGAGCGGTGCGGGAAGCGGAGCA
GACGATTTCCGGGAAAGAAGCGGCGAGGAGGAGAGGGGGGGAAGGGGCGG
ACCACCCAACGGAGACATGCAATCGGTGGAACGAGGCTGCGTTCAAGAGG
ACGGCCGAGGCGTCGGCGGCTGTGGAGCGAGATGATTGGGTGACGAGATC
CCGTGGATTTGAGGACGAGGCGAAGATACTTGTTGATGCCCTTCAAACAC
CGGGAGAAGAAAGCGCGAAAGCGCGCGAGGGACTCATGGCGATGGTGATC
GAGATCGCGGAGAGTCTGGCGAGGGCCCGTGGCGAGTTGGCGCGCGTGGG
TCAACTGCGGGAGGAAGAGGCGGCTTCGGCGAGGGAGAGGGAAGCTGGTC
TCAGGGACGAGCTAAAAACTGCCCAGGTGATGAGCACGCCATTTTTGGGG
GAAGAAAGGTTTCGGGTGAGTATTTGCGTTGCCAAAGATTGGTATTGCTC
GGGCGAGCGTGCCGTTGTATGACGCGGTTGCTCCTGTTTGTGGCATGGCG
TGTCGCGCGAAATCCATTTTTTTCTCGTGTCTGCAACGCACCTCCACGAA
GGATTTAACGCCCCGTTCCCTGTGAACCCTACGAGATGTACACTTTACGC
ACCCGCGTTTCCGAGACGGCACTCCAAGTCTCCCCCTCGGGAAACCAATA
CAATTGATTCCAGACAACAAACAAGTCAGTTAAACGTCCGCATAAACTTA
TGCATGCACTCGAAAAAAATGTGTATCCAGAAAAATGTTCACACTCTGCA
GACGGCAGCCCTGATGTCGGAAGACTCTCCTGCCAGGGTTCCCGTCGCAG
AGGGGACCGATACGCAAGACGCACCAGCAGTTTTTTTCTCACGGCCTCGC
CTCTTCGCATCGAACACGCAACAGGACGCTGCTCGTCGATCCTTGCTGAA
CCTCGCGCGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig736:282394..285753+

>mRNA_F-serratus_M_contig736.18602.1 ID=mRNA_F-serratus_M_contig736.18602.1|Name=mRNA_F-serratus_M_contig736.18602.1|organism=Fucus serratus male|type=CDS|length=3300bp|location=Sequence derived from alignment at F-serratus_M_contig736:282394..285753+ (Fucus serratus male)
TCGATATTACCATCAATTGATAGATCGCAGGTCTCGGCGGTATCGCAGGC
TTCCGAGATACCGCTGACCACATCCAGCTGCTGGCTGCGCTCCACGCCGA
TCCCTGCGACCAGTCTCGCGCGACGAGGCGGAAGGATCAGTACCACGACG
ACGTCGTTGTTGTCGCCTACGGGAGGACGGCAACGTCACTTTTCTTCGCC
TGAAGAGTATTTCTGCCTGCAGCGTGGCAACAGTGGCGGCGGCGATAACG
GTGACGTCGGCGACTTGGGCGATTTTAGAAGTTTTCAGAAAATAACTGAG
CAGCCGAACATGGCTTCGCGTGAAGTGGTGGAAAAAGAGAGGGGCGCGTC
GGTGAATGTCGCAGGAGGCGCATGGTTCTCGTGTATCGAGCAAGGAGAGA
ACGACGAGCTCGATCGCCTCAAGAAGTCGATATTACCATCAATTGATAGA
TCGCAGGTCTCGGCGGTATCGCAGGCTTCCGAGATACCGCTGACCACATC
CAGCTGCTGGCTGCGCTCCACGCCGATCCCTGCGACCAGTCTCGCGCGAC
GAGGCGGAAGGATCAGTACCACGACGACGTCGTTGTTGTCGCCTACGGGA
GGACGGCAACGTCACTTTTCTTCGCCTGAAGAGTATTTCTGCCTGCAGCG
TGGCAACAGTGGCGGCGGCGATAACGGTGACGTCGGCGACTTGGGCGATT
TTAGAAGTTTTCAGAAAATAACTGAGCAGCCGAACATGGCTTCGCGTGAA
GTGGTGGAAAAAGAGAGGGGCGCGTCGGTGAATGTCGCAGGAGGCGCATG
GTTCTCGTGTATCGAGCAAGGAGAGAACGACGAGCTCGATCGCCTCAAGA
AGAAGGTCGCAGGGATCCGCGAGCAGTACTCCGAAGCGCTGGGCAATAGT
TCGAATCAGGTCGAATCTGTGCAGCGAAGGTCGCAGGGATCCGCGAGCAG
TACTCCGAAGCGCTGGGCAATAGTTCGAATCAGGTCGAATCTGTGCAGCG
GAATGAAGTCAAGGTACTACGGTGCTCGTTGGTTGCGCTCAGGGCGGCGC
TCTCATCGGAGAAGAGGCGTCGCTTGGAGGCCATAGCGCGGTTCGAGGGT
GAGGTGGACTGGCTTCGACGAGAGTCCGACCGAGCCGTAAGACGGGCGAA
AGAGGCGGAGAGGCAAAAGGATGCCGCGCACGCAAGGCTCGTGGAGAAAG
ACGCTGGAATGAAGTCAAGGTACTACGGTGCTCGTTGGTTGCGCTCAGGG
CGGCGCTCTCATCGGAGAAGAGGCGTCGCTTGGAGGCCATAGCGCGGTTC
GAGGGTGAGGTGGACTGGCTTCGACGAGAGTCCGACCGAGCCGTAAGACG
GGCGAAAGAGGCGGAGAGGCAAAAGGATGCCGCGCACGCAAGGCTCGTGG
AGAAAGACGCTGACGACTTCAGCAGGAGCTATGCCCTCGAAAAGAGAGCC
ACGACTTTGGAGGAGCGGTCTAGGGTGACAGCGGTGAGGAACGAACGCCT
GCGCGACCGCCTCGACGCCGTCTTGGGAGACGTTGAGACGACTTCAGCAG
GAGCTATGCCCTCGAAAAGAGAGCCACGACTTTGGAGGAGCGGTCTAGGG
TGACAGCGGTGAGGAACGAACGCCTGCGCGACCGCCTCGACGCCGTCTTG
GGAGACGTTGAGGAGATGCTTCAGTACAACAAGGACTTGATTGCCGAACT
CGAGGCCTGCCGCAGCTCCCAGGAAGCCCTGATCGCCCAAAAGTTGACCT
CGATGGAAGAGAACGCCGCGGAGAGGGAACGGCTCGCCAGAGAGCTGACG
GATGCCAGGGCTAGAATAACTTCGCTTCAAAACGACGAGGCGTCACTGCA
CAAGGCGCACCGTACCGTCATAGCTGAAGCGGAATCGCTGCGGCGATCGC
TCGCATGGGCGCGTCGCGAGGCGGTCGAAGCAAGGGCGACCGCCTCGCTC
GTCGCAGAGGCCACGATTATTTCCGAGGTTTCTCCTGGTGCTGCTACTGC
TGTCGCGGGAGCGGTGCGGGAAGCGGAGCAGACGATTTCCGGGAAAGAAG
CGGCGAGGAGGAGAGGGGGGGAAGGGGCGGACCACCCAACGGAGACATGC
AATCGGTGGAACGAGGCTGCGTTCAAGAGGACGGCCGAGGCGTCGGCGGC
TGTGGAGCGAGATGATTGGGTGACGAGATCCCGTGGATTTGAGGACGAGG
CGAAGATACTTGTTGATGCCCTTCAAACACCGGGAGAAGAAAGCGCGAAA
GCGCGCGAGGGACTCATGGCGATGGTGATCGAGATCGCGGAGAGTCTGGC
GAGGGCCCGTGGCGAGTTGGCGCGCGTGGGTCAACTGCGGGAGGAAGAGG
CGGCTTCGGCGAGGGAGAGGGAAGCTGGTCTCAGGGACGAGCTAAAAACT
GCCCAGGTGATGAGCACGCCATTTTTGGGGGAAGAAAGGTTTCGGGAGAT
GCTTCAGTACAACAAGGACTTGATTGCCGAACTCGAGGCCTGCCGCAGCT
CCCAGGAAGCCCTGATCGCCCAAAAGTTGACCTCGATGGAAGAGAACGCC
GCGGAGAGGGAACGGCTCGCCAGAGAGCTGACGGATGCCAGGGCTAGAAT
AACTTCGCTTCAAAACGACGAGGCGTCACTGCACAAGGCGCACCGTACCG
TCATAGCTGAAGCGGAATCGCTGCGGCGATCGCTCGCATGGGCGCGTCGC
GAGGCGGTCGAAGCAAGGGCGACCGCCTCGCTCGTCGCAGAGGCCACGAT
TATTTCCGAGGTTTCTCCTGGTGCTGCTACTGCTGTCGCGGGAGCGGTGC
GGGAAGCGGAGCAGACGATTTCCGGGAAAGAAGCGGCGAGGAGGAGAGGG
GGGGAAGGGGCGGACCACCCAACGGAGACATGCAATCGGTGGAACGAGGC
TGCGTTCAAGAGGACGGCCGAGGCGTCGGCGGCTGTGGAGCGAGATGATT
GGGTGACGAGATCCCGTGGATTTGAGGACGAGGCGAAGATACTTGTTGAT
GCCCTTCAAACACCGGGAGAAGAAAGCGCGAAAGCGCGCGAGGGACTCAT
GGCGATGGTGATCGAGATCGCGGAGAGTCTGGCGAGGGCCCGTGGCGAGT
TGGCGCGCGTGGGTCAACTGCGGGAGGAAGAGGCGGCTTCGGCGAGGGAG
AGGGAAGCTGGTCTCAGGGACGAGCTAAAAACTGCCCAGGTGATGAGCAC
GCCATTTTTGGGGGAAGAAAGGTTTCGGGACGCTGCTCGTCGATCCTTGC
TGAACCTCGCGCGGGACGCTGCTCGTCGATCCTTGCTGAACCTCGCGCGG
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