mRNA_F-serratus_M_contig718.18379.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig718.18379.1
Unique NamemRNA_F-serratus_M_contig718.18379.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5KSI8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI8_9PHAE)

HSP 1 Score: 483 bits (1243), Expect = 4.200e-167
Identity = 228/294 (77.55%), Postives = 263/294 (89.46%), Query Frame = 1
Query:   43 AVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGDGFLV 924
            AVEACLSAG+PL AL N  +K+FLHHLG +LPG +HL+N+IPFIEKKE Q++L+EVGDS Y++ FDETPYR ACFG+GIRFVNK G+ITQRVL+LS+LSKSMDFKAI+GEVMKI VD YK+DR +C  FMLDGC AN+KALDTLL++FPN+VGVRCFSHLLNNCGNEL+SE+ DKFAGHLHVLL+HS NA+DLWL+ETKV PPKPVSHRWSSR+VRNN +V  WQ  KTF+DKFTS +ESRSKSA A+REEL RVRPDGVHQELILQLGFA+  DVGIHL RATHLLEGDGFL+
Sbjct:    2 AVEACLSAGVPLNALENSLMKDFLHHLGARLPGARHLANYIPFIEKKEKQRILDEVGDSRYAITFDETPYRAACFGIGIRFVNKEGQITQRVLNLSMLSKSMDFKAIHGEVMKITVDEYKIDRSKCVGFMLDGCGANMKALDTLLLNFPNAVGVRCFSHLLNNCGNELSSEETDKFAGHLHVLLAHSHNARDLWLQETKVSPPKPVSHRWSSRYVRNNALVLNWQQMKTFVDKFTSTEESRSKSAAAMREELGRVRPDGVHQELILQLGFAVTVDVGIHLVRATHLLEGDGFLL 295          
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5KEG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG8_9PHAE)

HSP 1 Score: 431 bits (1108), Expect = 2.050e-144
Identity = 211/308 (68.51%), Postives = 252/308 (81.82%), Query Frame = 1
Query:    1 GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETK-VQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGDGFL 921
            G SL  +EL+TQ+ AVEACLS+G+ L AL  P  KEF  H+G +L   +HL+NHIPFI  KE +K+L+E+GDS YS+ F+ETPYR ACFGVGIRF+ K G+ITQRVLSLS+LSKSMDF AINGEVMK++VD Y+LDR +C  FMLDGC+AN+KALDTL ++F  + GVRCFSHL  N GNE+ S+D DKFAGHLH LLSHS NAKDLWL+ET  V PPKP SHRWSSRF RN+ +V  WQ  K+F++KFTS DES+SKSA A+R+ LA VRPD +HQEL+LQL FA+AADVGIHLTRATHLLEGDGFL
Sbjct:  271 GNSLHPKELMTQLMAVEACLSSGVALNALDQPLKKEFFRHVGARLQTARHLANHIPFILNKEKKKILDELGDSRYSITFNETPYRAACFGVGIRFITKAGKITQRVLSLSMLSKSMDFAAINGEVMKVVVDDYRLDRQKCVGFMLDGCSANLKALDTLKMNFRIATGVRCFSHLCKNSGNEMNSDDTDKFAGHLHTLLSHSHNAKDLWLQETGGVAPPKPPSHRWSSRFERNDCLVRNWQQMKSFVNKFTSADESKSKSAAAMRDTLAHVRPDNIHQELVLQLEFAVAADVGIHLTRATHLLEGDGFL 578          
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5JNC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNC2_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 8.920e-110
Identity = 156/198 (78.79%), Postives = 176/198 (88.89%), Query Frame = 1
Query:  331 VLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGDGFLV 924
            +LSKSMDFKAI+GEVMKI VD YK+DR +C  FMLDGC AN+KALDTLL++FPN+VGVRCFSHLLNNCGNEL+SE+ DKFAGHLHVLL+HS NA+DLWL+ETKV PPKPVSHRWSSR+VRNN +V  WQ  KTF+DKFTS +ESRS SA A+REEL RVR DGVHQELILQLGFA+A DVGIHL R THLLEGDGFL+
Sbjct:    1 MLSKSMDFKAIHGEVMKITVDEYKIDRSKCVGFMLDGCGANMKALDTLLLNFPNAVGVRCFSHLLNNCGNELSSEETDKFAGHLHVLLAHSHNARDLWLQETKVSPPKPVSHRWSSRYVRNNALVLNWQQMKTFVDKFTSTEESRSNSAAAMREELGRVRLDGVHQELILQLGFAVAVDVGIHLVRPTHLLEGDGFLL 198          
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5JIR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR3_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 1.120e-103
Identity = 166/308 (53.90%), Postives = 209/308 (67.86%), Query Frame = 1
Query:    1 GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGDGFLV 924
            G +L+ +E+  QI   + CLSAG+PL AL NP +K+ LH  GVKLP   HL+N+IP I K       EE+GD  Y+V FD TPYRC CFG+GIRF+   G+I QR+L LS+L+ SMD+KAI GE+ K++   YKL  +RCR FMLDGC+ N+KAL  L     NSVG+RC SHLLN  GN++ S  +DKFAG L  +LSHS NA D W + T   PPK  +HRW S + RNN +V  WQ  KTFID F+S DE+RS+ A   R ELAR    G HQE+ LQ+ FA+A D+G HLT  T+LLEGDG L+
Sbjct:  245 GSTLTPKEVTQQILFTKGCLSAGVPLNALNNPTMKDALHFAGVKLPSANHLANYIPVILK-------EELGDGTYTVCFDGTPYRCECFGIGIRFIGPDGQICQRLLGLSMLANSMDYKAIFGELNKVVFMEYKLRPERCRGFMLDGCSPNLKALVALTTHCANSVGIRCASHLLNLSGNQMESSQIDKFAGALQTVLSHSHNAADQWRKATGTTPPKAPNHRWGSAYERNNLLVTNWQQMKTFIDDFSSSDETRSRKADFCRRELARFGKHGYHQEVWLQIEFAVAVDLGKHLTNGTYLLEGDGMLL 545          
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5JW81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW81_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 6.480e-92
Identity = 139/198 (70.20%), Postives = 163/198 (82.32%), Query Frame = 1
Query:  331 VLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETK-VQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGDGFL 921
            +LS SMDF AINGEVMK++VD Y+LDR +C  FMLDGC+AN+KALDTL ++F  + GVRCFSHL  N GNE+ S+D  KFAGHLH LLSHS NAKDLWL+ET  V PPKP SHRWSSRF RN+ +V  WQ  K+F++KFTS DES+SKSA A+R+ LA VRPD +HQEL+LQL F +AADVGIHLTRATHLLEGDGFL
Sbjct:    1 MLSNSMDFAAINGEVMKVVVDDYRLDRQKCVGFMLDGCSANLKALDTLKMNFRIATGVRCFSHLCKNSGNEMNSDDTHKFAGHLHTLLSHSHNAKDLWLQETGGVAPPKPPSHRWSSRFERNDCLVRSWQQMKSFVNKFTSADESKSKSAAAMRDMLAHVRPDNIHQELVLQLEFVVAADVGIHLTRATHLLEGDGFL 198          
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5JX99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX99_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 1.820e-89
Identity = 136/255 (53.33%), Postives = 181/255 (70.98%), Query Frame = 1
Query:    1 GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESR 765
            G +L+ +E+  QI   + CLSAG+PL AL NP +K+ LH+ GVKLP   HL+NHIP I K+E+  +LEE+GD NY+V FD TPYRC CFG+GIRF+++ G+I  R+L LS+L+ SMD++ I GE+ K++   YKL  +RCR F+LDGC+ N+KAL  L+     +VGVRC SHL+NN GN++ S  +DKFAG LH +LSHS NAKD W + T   PPK  SHRW S +  NN +V  WQ  K FID F+S DE++
Sbjct:  201 GCTLTPKEVTRQILFTKGCLSAGVPLNALNNPTMKDALHYTGVKLPSANHLANHIPAILKEEI--ILEELGDGNYTVCFDGTPYRCECFGIGIRFIDQTGQICPRLLWLSMLANSMDYQDIYGEIHKVVFMEYKLKPERCRGFLLDGCSPNLKALLALVTYCRFAVGVRCMSHLINNTGNQIDSGQIDKFAGALHTVLSHSHNAKDQWRKATNTTPPKAPSHRWGSTYETNNQLVTSWQPTKDFIDAFSSSDETK 453          
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 9.670e-88
Identity = 144/305 (47.21%), Postives = 195/305 (63.93%), Query Frame = 1
Query:    1 GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLIS-FPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGD 912
            G +LS ++ + Q+  V  CLSAGIPL AL +PQ+K F     ++ PG+ HL+ H+PF+ +KE+   L E+G+ NY+V FD TPYRC CFG+G+RF+N+ G++ QRVL +++L KSM  + I G+V   L + + L   RC  FMLDGCAAN+ ALD+L    +  SVG+ CFSHL NN G  L   DVD+F G LH LLSHS  AK L+ E   V  P   +HRW SR+ R+  +   W G   FI+ + S D+ +SK+A  LR ELAR R DG  Q L+L++  A+  DVG  +T A   LEGD
Sbjct:   10 GDTLSDRDKLLQVKLVAGCLSAGIPLHALEDPQMKAFFDFANIRAPGRSHLAEHVPFLLRKELDTTLSELGNGNYTVCFDATPYRCECFGIGLRFINQNGQVVQRVLKIAMLKKSMSARDIVGQVNDTLGEEFNLRASRCIGFMLDGCAANLLALDSLTQHIYRKSVGIPCFSHLFNNIGTRLRFPDVDEFLGKLHTLLSHSPQAKALFREIVGVTDPPTPNHRWGSRYERDYLIAMNWPGVVKFIEAYKSNDDEKSKTATWLRSELARKRNDGKDQVLVLRMQLAVLVDVGKIVTAACIFLEGD 314          
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5KPH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH4_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 2.650e-86
Identity = 134/278 (48.20%), Postives = 185/278 (66.55%), Query Frame = 1
Query:    1 GVSLSRQELVTQIGAVEACLSAG-IPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQE 831
            G +L+ +++  +I   + CLSAG +       P++K+  H+ GV LP    L+NHI  I K+EM+ +L E+GD NY+V FD T YRC CFG+GIRF+++ G+I Q +L LS+L+ SMD++ I GE+ K++   YKL  +RCR FMLDGC+ N+KAL  L+     +VGVRC SH++N  GN++ S  +DKFAG LH +LSHS NA D W + T   PPK  +HRW S + RNN +V  WQ AK FID F+S DE++S+ A     ELAR+  DG HQE
Sbjct:   16 GCTLTPKDVAQEILFTKGCLSAGLVTFERPEQPRMKDAYHYAGVMLPSANRLANHITVILKEEMKIILGELGDGNYTVCFDGTLYRCECFGIGIRFIDQTGQICQPLLWLSMLANSMDYQDIYGEIHKVVFMEYKLKPERCRGFMLDGCSPNLKALLALVTHCRFAVGVRCMSHVINKAGNQIESGQIDKFAGALHTVLSHSHNAHDQWRKATNTTPPKAPNHRWGSTYERNNQLVTGWQPAKNFIDAFSSSDETKSRKADFCWGELARLGKDGYHQE 293          
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5JN03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN03_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 4.080e-81
Identity = 137/305 (44.92%), Postives = 186/305 (60.98%), Query Frame = 1
Query:    1 GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQHLSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLIS-FPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHLLEGD 912
            G +LS ++ + Q+     CLSAGIPL ALG+PQ+K F     + +PG  HL+ HIP + + E+   L E+GD NY+V FD TPYRC CFG+ +RF++++G++ Q VL + +L+KSM  + I G+V   L + + L   RC  FMLDGC AN+ ALD+L    +  S+GV CFSHL NN G  L   D++ F G LH LLSHS  AK L  E   V  P   +HRW SRF R+  +     G   FI+   S DE +S++A  LR ELAR R DG +Q L+L++  A+  DVG  +T     LEGD
Sbjct:   10 GDTLSNRDKLLQVKLATGCLSAGIPLHALGDPQMKVFFDFANICMPGDSHLAKHIPVLLRTELDTALSELGDGNYTVCFDPTPYRCECFGIELRFIDQKGQVVQHVLKIEMLTKSMSARDIVGQVNDTLSEEFCLKASRCIGFMLDGCTANLLALDSLTQHIYRRSLGVSCFSHLFNNIGKRLIFPDLEDFLGKLHTLLSHSPQAKALLREIVGVADPPTPNHRWGSRFERDYLVAMNSPGVVKFIEAHKSNDEDKSRTAAWLRSELARKRDDGKYQVLVLRMQLAVLVDVGKIVTATCIFLEGD 314          
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Match: A0A6H5KEZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ7_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 9.760e-59
Identity = 108/194 (55.67%), Postives = 130/194 (67.01%), Query Frame = 1
Query:  292 KRGEITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAANIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSHSQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTSKDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVG 873
            KR EI QR+LSLS+L+KSMDFK I GEV  +L   + LD  RC  FMLDGCAAN+KAL  L     N+VG+RC S L NN G+++ S  +DKFAG L  +LS S NA + W   T + PPK  SHRW+S F RN+ +V  WQ AK FIDKF+S DE+RS  A   REELAR+     HQE  LQL FALA D+G
Sbjct:   65 KRDEICQRLLSLSMLAKSMDFKDIFGEVNNVLAR-FGLDPARCVGFMLDGCAANMKALMALTTHCRNAVGMRCMSDLFNNAGDQIESTQIDKFAGALQTVLSVSHNASEQWRAATGMSPPKAPSHRWASSFERNDKLVTDWQHAKHFIDKFSSSDETRSAKAAFCREELARLGQYCYHQEFWLQLEFALAVDLG 257          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig718.18379.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KSI8_9PHAE4.200e-16777.55Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KEG8_9PHAE2.050e-14468.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNC2_9PHAE8.920e-11078.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIR3_9PHAE1.120e-10353.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW81_9PHAE6.480e-9270.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JX99_9PHAE1.820e-8953.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6R8_9PHAE9.670e-8847.21Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KPH4_9PHAE2.650e-8648.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN03_9PHAE4.080e-8144.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEZ7_9PHAE9.760e-5955.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig718contigF-serratus_M_contig718:111744..113065 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score126.7
Seed ortholog evalue1.9e-26
Seed eggNOG ortholog400682.PAC_15703819
Hectar predicted targeting categoryother localisation
EggNOG OGs2F3H4@1,2T4GH@2759,3AMYP@33154,3C10E@33208
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons3
Model size933
Cds size933
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig718.18379.1prot_F-serratus_M_contig718.18379.1Fucus serratus malepolypeptideF-serratus_M_contig718 111744..113065 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932195.4398928-CDS-F-serratus_M_contig718:111743..1123731622932195.4398928-CDS-F-serratus_M_contig718:111743..112373Fucus serratus maleCDSF-serratus_M_contig718 111744..112373 -
1690964193.5323892-CDS-F-serratus_M_contig718:111743..1123731690964193.5323892-CDS-F-serratus_M_contig718:111743..112373Fucus serratus maleCDSF-serratus_M_contig718 111744..112373 -
1622932195.4612637-CDS-F-serratus_M_contig718:112597..1127141622932195.4612637-CDS-F-serratus_M_contig718:112597..112714Fucus serratus maleCDSF-serratus_M_contig718 112598..112714 -
1690964193.5443401-CDS-F-serratus_M_contig718:112597..1127141690964193.5443401-CDS-F-serratus_M_contig718:112597..112714Fucus serratus maleCDSF-serratus_M_contig718 112598..112714 -
1622932195.4802685-CDS-F-serratus_M_contig718:112879..1130651622932195.4802685-CDS-F-serratus_M_contig718:112879..113065Fucus serratus maleCDSF-serratus_M_contig718 112880..113065 -
1690964193.5547411-CDS-F-serratus_M_contig718:112879..1130651690964193.5547411-CDS-F-serratus_M_contig718:112879..113065Fucus serratus maleCDSF-serratus_M_contig718 112880..113065 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig718.18379.1

>prot_F-serratus_M_contig718.18379.1 ID=prot_F-serratus_M_contig718.18379.1|Name=mRNA_F-serratus_M_contig718.18379.1|organism=Fucus serratus male|type=polypeptide|length=311bp
GVSLSRQELVTQIGAVEACLSAGIPLAALGNPQVKEFLHHLGVKLPGQQH
LSNHIPFIEKKEMQKVLEEVGDSNYSVVFDETPYRCACFGVGIRFVNKRG
EITQRVLSLSVLSKSMDFKAINGEVMKILVDVYKLDRDRCRAFMLDGCAA
NIKALDTLLISFPNSVGVRCFSHLLNNCGNELASEDVDKFAGHLHVLLSH
SQNAKDLWLEETKVQPPKPVSHRWSSRFVRNNTMVEVWQGAKTFIDKFTS
KDESRSKSAKALREELARVRPDGVHQELILQLGFALAADVGIHLTRATHL
LEGDGFLVSH*
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mRNA from alignment at F-serratus_M_contig718:111744..113065-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig718.18379.1 ID=mRNA_F-serratus_M_contig718.18379.1|Name=mRNA_F-serratus_M_contig718.18379.1|organism=Fucus serratus male|type=mRNA|length=1322bp|location=Sequence derived from alignment at F-serratus_M_contig718:111744..113065- (Fucus serratus male)
GGCGTCTCTCTGAGCCGGCAGGAGCTCGTGACGCAAATCGGGGCAGTTGA GGCGTGCCTCTCAGCCGGGATCCCTCTCGCTGCCCTGGGCAACCCGCAGG TGAAGGAATTTCTGCATCATTTGGGCGTGAAGCTGCCGGGACAACAGCAC CTCAGCAATCACATCCCCTTCATTGAGAAGAAAGAAGTGAGTGGTTCCTA GCGCAAGGTAGCCCATATTTAAGTATGGTACCGTGACTCCCTCTTACTCT GTTTGTTGCAGTGGGTGGTTTCTTGGTCTCGTACATATATTTCTCCCGCT TATAAAAACGCCGAACGTCCCAATCTCTTAACGTCTCACATGCCACGTCA GATGCAAAAGGTTCTCGAAGAGGTTGGGGACTCCAACTACTCGGTCGTAT TCGACGAGACACCGTACCGCTGCGCGTGCTTCGGTGTTGGCATTCGTTTC GTCAACAAGCGAGGAGAGGTGATAATTTTGATTGATGCAATGTTTGATTG AACTCGCGTAGAGAATTCGCTGCGTACGCTTCCAGAAATGAAGGTAGCGG TCGAAGTATTGGATGTTTACCAATGGCCATCGTGTGCATGTAGTTTTCAG CTGCTGTACACCAGCAAAACGCGTTCAGCCACGACGTTGTACCAGTTTTT TGTTCGCGCCTGTCATTTTTGTTTGTTCCTCTCTGTCGACAGATCACTCA GCGAGTGCTTAGCCTGAGCGTGCTGAGTAAGTCCATGGACTTCAAGGCCA TCAACGGCGAAGTCATGAAGATCCTTGTAGACGTGTACAAGTTGGACCGG GATCGGTGCCGCGCCTTCATGCTCGACGGATGCGCCGCTAACATCAAAGC CCTCGACACGTTGCTGATTAGCTTCCCCAACTCGGTTGGCGTGCGTTGCT TCTCCCACCTCCTCAACAACTGCGGCAACGAGCTCGCATCGGAGGACGTC GACAAGTTCGCCGGCCACTTGCACGTCCTCTTGTCTCACAGCCAAAACGC CAAAGACTTGTGGTTGGAGGAGACCAAGGTGCAGCCTCCGAAGCCTGTCT CCCACCGCTGGAGCTCGCGCTTCGTGCGAAACAACACCATGGTGGAGGTC TGGCAGGGAGCGAAGACCTTCATCGACAAGTTCACCTCGAAGGATGAGTC CAGGTCCAAGTCGGCCAAGGCGCTGAGGGAGGAGCTCGCACGTGTTCGGC CGGATGGTGTCCACCAGGAGCTTATCCTTCAGCTGGGGTTTGCGCTGGCT GCGGACGTTGGGATCCACCTGACGCGTGCCACGCATCTGCTGGAGGGAGA CGGGTTTTTGGTAAGTCATTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig718:111744..113065-

>mRNA_F-serratus_M_contig718.18379.1 ID=mRNA_F-serratus_M_contig718.18379.1|Name=mRNA_F-serratus_M_contig718.18379.1|organism=Fucus serratus male|type=CDS|length=1866bp|location=Sequence derived from alignment at F-serratus_M_contig718:111744..113065- (Fucus serratus male)
GGCGTCTCTCTGAGCCGGCAGGAGCTCGTGACGCAAATCGGGGCAGTTGA
GGCGTGCCTCTCAGCCGGGATCCCTCTCGCTGCCCTGGGCAACCCGCAGG
TGAAGGAATTTCTGCATCATTTGGGCGTGAAGCTGCCGGGACAACAGCAC
CTCAGCAATCACATCCCCTTCATTGAGAAGAAAGAAGGCGTCTCTCTGAG
CCGGCAGGAGCTCGTGACGCAAATCGGGGCAGTTGAGGCGTGCCTCTCAG
CCGGGATCCCTCTCGCTGCCCTGGGCAACCCGCAGGTGAAGGAATTTCTG
CATCATTTGGGCGTGAAGCTGCCGGGACAACAGCACCTCAGCAATCACAT
CCCCTTCATTGAGAAGAAAGAAATGCAAAAGGTTCTCGAAGAGGTTGGGG
ACTCCAACTACTCGGTCGTATTCGACGAGACACCGTACCGCTGCGCGTGC
TTCGGTGTTGGCATTCGTTTCGTCAACAAGCGAGGAGAGATGCAAAAGGT
TCTCGAAGAGGTTGGGGACTCCAACTACTCGGTCGTATTCGACGAGACAC
CGTACCGCTGCGCGTGCTTCGGTGTTGGCATTCGTTTCGTCAACAAGCGA
GGAGAGATCACTCAGCGAGTGCTTAGCCTGAGCGTGCTGAGTAAGTCCAT
GGACTTCAAGGCCATCAACGGCGAAGTCATGAAGATCCTTGTAGACGTGT
ACAAGTTGGACCGGGATCGGTGCCGCGCCTTCATGCTCGACGGATGCGCC
GCTAACATCAAAGCCCTCGACACGTTGCTGATTAGCTTCCCCAACTCGGT
TGGCGTGCGTTGCTTCTCCCACCTCCTCAACAACTGCGGCAACGAGCTCG
CATCGGAGGACGTCGACAAGTTCGCCGGCCACTTGCACGTCCTCTTGTCT
CACAGCCAAAACGCCAAAGACTTGTGGTTGGAGGAGACCAAGGTGCAGCC
TCCGAAGCCTGTCTCCCACCGCTGGAGCTCGCGCTTCGTGCGAAACAACA
CCATGGTGGAGGTCTGGCAGGGAGCGAAGACCTTCATCGACAAGTTCACC
TCGAAGGATGAGTCCAGGTCCAAGTCGGCCAAGGCGCTGAGGGAGGAGCT
CGCACGTGTTCGGCCGGATGGTGTCCACCAGGAGCTTATCCTTCAGCTGG
GGTTTGCGCTGGCTGCGGACGTTGGGATCCACCTGACGCGTGCCACGCAT
CTGCTGGAGGGAGACGGGTTTTTGGTAAGTCATTGAATCACTCAGCGAGT
GCTTAGCCTGAGCGTGCTGAGTAAGTCCATGGACTTCAAGGCCATCAACG
GCGAAGTCATGAAGATCCTTGTAGACGTGTACAAGTTGGACCGGGATCGG
TGCCGCGCCTTCATGCTCGACGGATGCGCCGCTAACATCAAAGCCCTCGA
CACGTTGCTGATTAGCTTCCCCAACTCGGTTGGCGTGCGTTGCTTCTCCC
ACCTCCTCAACAACTGCGGCAACGAGCTCGCATCGGAGGACGTCGACAAG
TTCGCCGGCCACTTGCACGTCCTCTTGTCTCACAGCCAAAACGCCAAAGA
CTTGTGGTTGGAGGAGACCAAGGTGCAGCCTCCGAAGCCTGTCTCCCACC
GCTGGAGCTCGCGCTTCGTGCGAAACAACACCATGGTGGAGGTCTGGCAG
GGAGCGAAGACCTTCATCGACAAGTTCACCTCGAAGGATGAGTCCAGGTC
CAAGTCGGCCAAGGCGCTGAGGGAGGAGCTCGCACGTGTTCGGCCGGATG
GTGTCCACCAGGAGCTTATCCTTCAGCTGGGGTTTGCGCTGGCTGCGGAC
GTTGGGATCCACCTGACGCGTGCCACGCATCTGCTGGAGGGAGACGGGTT
TTTGGTAAGTCATTGA
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