mRNA_F-serratus_M_contig704.18239.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig704.18239.1
Unique NamemRNA_F-serratus_M_contig704.18239.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig704.18239.1 vs. uniprot
Match: A0A6H5KSL6_9PHAE (V-SNARE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL6_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 1.990e-88
Identity = 169/244 (69.26%), Postives = 195/244 (79.92%), Query Frame = 3 
Query:   48 MEPLGYESGPSRAMSTFKAHEESYHRCSQAINRHINGLQLGT-VEAVAAEDLPADLVEAEQHVKGMEIEVRSMRGSERRQCQSRANQCRADLKSLRKSVEQQAAQRAQAEELMRRRDGSEGRPSGMTGEWSGGGA----LGPDVAQQSLAR---SRLSLLDSRRVLDETEGVGRRVVGDLESQRESLLRSQAHVRDTEGAAVKARRMLRSLSRKEFRHRLLLYLVILILAGAIVLVVYLKIRRH 755
            MEP G+ESGPSRA+ TF++HEESYHRCS +INR ING+QL   V+AV A  LP DL EAEQHVKGMEIE RSM+G+ERRQCQSRANQCRADLK+LR+S++Q A QRAQAEELMRR  G  G   G    +S GG     LGPD+AQQSLAR   SRLSL DSRRVL+ETEG+GR V+GDLESQRESLLRS+A VRDT  AA +ARR+L S+SR+E RHRL LY VI +L+ AIV V+YLKIRR 
Sbjct:    1 MEPFGFESGPSRAVQTFQSHEESYHRCSMSINRAINGIQLNNLVDAVGATSLPLDLQEAEQHVKGMEIEARSMKGNERRQCQSRANQCRADLKALRRSIDQ-AGQRAQAEELMRRSGG--GAIGGEPRSFSEGGGDLRGLGPDLAQQSLARRVLSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRR 241
[Close]
BLAST of mRNA_F-serratus_M_contig704.18239.1 vs. uniprot
Match: A0A835ZAL4_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL4_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.510e-30
Identity = 98/256 (38.28%), Postives = 145/256 (56.64%), Query Frame = 3 
Query:   48 MEPLGYESGPSRA----MSTFKAHEESYHRCSQAINRHINGLQLGTVEAVA---------AEDLPADLVEA--------EQHVKGMEIEVRSMRGSERRQCQSRANQCRADLKSLRKSVEQQAAQRAQAEELMRRRDGSEGRPSGMTGEWSGGGALGPDVAQQSLARSRLSLLDSRRVLDETEGVGRRVVGDLESQRESLLRSQAHVRDTEGAAVKARRMLRSLSRKEFRHRLLLYLVILILAGAIVLVVYLKIRR 752
            M+PL  E+ P R+    M+ F ++E+SY + ++ IN HI+ L   ++ A A             P  +V+A        E   +GMEIEVRSM G++R++C ++A Q R+DL +LR++ +Q  A+ A+                           LG D   ++LAR+ +SL DSRRVL ETE VG RVV DLE QR+SLLR++ + R+     V+AR +LR+++R++ RHRL LY +I  L  AI  V+YLK RR
Sbjct:    1 MQPLDVEAPPPRSSTSTMTIFNSYEDSYLQAARGINAHISALW--SLRAAANXXXXXXXXXXXXPERIVDAATRLFEESESLARGMEIEVRSMTGADRKKCGAKAAQYRSDLLALRRAFDQARARAARE--------------------------LGYDGGGRALARTAISLTDSRRVLAETEDVGARVVTDLEGQRQSLLRARDNAREISYDTVEAREVLRAIARRDARHRLALYAIIAALLCAIAFVLYLKFRR 228
[Close]
BLAST of mRNA_F-serratus_M_contig704.18239.1 vs. uniprot
Match: A0A0G4FLB7_VITBC (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLB7_VITBC)

HSP 1 Score: 84.7 bits (208), Expect = 1.000e-14
Identity = 72/238 (30.25%), Postives = 130/238 (54.62%), Query Frame = 3 
Query:   84 AMSTFKAHEESYHRCSQAINRHINGLQL---GTVEAVAAEDLPADLVEAEQHVKGMEIEVRSMRGSERRQCQSRANQCRADLKSLRKSVEQQAAQRAQAEELMRRRDGSEGRPSGMTGEWSGGGALGPDVAQQSLARSRL------------SLLDSRRVLDETEGVGRRVVGDLESQRESLLRSQAHVRDTEGAAVKARRMLRSLSRKEFRHRLLLYLVILILAGAIVLVVYLKIRR 752
            A  TF ++E+ YH+ ++ I++ I+ +Q    G  E     DL   L +A   +K ME+EV+SM  +      ++  + RADL  L +  ++  A+  + + + R R  ++   + +    SGG  +    +  S  R+RL             L  S+RV  +TE VG  V+ DL+ QRE+L+R+  HVRDT+    +A+R+LR++ R+   +++LL+++I++L  AIV+ + +K+ R
Sbjct:    9 ASETFTSYEDDYHQLARDISQRISQIQTQRCGPAEVAETGDL---LQDARSCLKHMELEVQSMPANT--SLTNKVKRIRADLTDLSRDFDRVRARHQRDQLIGRGRYAADDTSASVP--MSGGQQMQESSSAPSSHRARLLEGQDMLQDGTRRLEQSKRVALDTESVGINVMSDLKGQRETLMRTHQHVRDTDSNLQRAKRILRTMGRRALTNKVLLHVIIVLLLLAIVMTLVMKLTR 239
[Close]
BLAST of mRNA_F-serratus_M_contig704.18239.1 vs. uniprot
Match: A0A7S0WIR7_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WIR7_9CHLO)

HSP 1 Score: 73.6 bits (179), Expect = 5.170e-11
Identity = 65/227 (28.63%), Postives = 120/227 (52.86%), Query Frame = 3 
Query:   84 AMSTFKAHEESYHRCSQAINRHINGLQL--GTVEAVAAEDLPADLVEAEQHVKGMEIEVRSMRGSERRQCQSRANQCRADLKSLRKSVEQQAAQRAQAEELMRRRDGSEGRPSGMTGEWSGGGALGPD---VAQQSLARSRLSLLDSRRVLDETEGVGRRVVGDLESQRESLLRSQAHVRDTEGAAVKARRMLRSLSRKEFRHRLLLYLVILILAGAIVLVVYLKIR 749
            A + F+ +E+ Y   S   +R I  L+   G        ++  DL +AE  +K M++EVRS+   + +  Q++  + +ADL SL+  V Q+AA    A +  R          G+ G+++   A   D    A Q L ++   L   ++ L +TE +G  ++ DL SQRE+++ S   +R  +    KAR++L +++R+  ++++++  VIL L  AI L+++ K+R
Sbjct:   12 ASALFRQYEQDYCTKSTDTSRKIGLLEALNGDARRKKLSEIEGDLRQAEDVLKRMDLEVRSLPADQSKPLQAKVKEYKADLASLKTQV-QKAAASMPAGDAARAE-------LGLGGDYASSSAGQRDRMLTATQRLEKTNDVLDYGKQTLMQTEELGASILKDLHSQRETIVHSSNTLRGADDNITKARKILSNMARRLMQNKIIMAGVILFLVAAIALIIWAKVR 230
[Close]
BLAST of mRNA_F-serratus_M_contig704.18239.1 vs. uniprot
Match: A0A7S1C7L7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7L7_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.500e-10
Identity = 72/228 (31.58%), Postives = 112/228 (49.12%), Query Frame = 3 
Query:   84 AMSTFKAHEESYHRCSQAINRHINGLQLGTVE--AVAAEDLPADLVEA-------EQHVKGMEIEVRSMRGSERRQCQSRANQCRADLKSLRKSVEQQAAQRAQAEELMR--RRDGSEGRPSGMTGEWSGGGALGPDVAQQSLARSRLSLLDSRRVLDETEGVGRRVVGDLESQRESLLRSQAHVRDTEGAAVKARRMLRSLSRKEFRHRLLLYLVILILAGAIVLVV 734
            A   F ++ E +    + + R +  L  G  +  A A E    D  +A       E  V+ ME+E RS+  SE+R+   R    RA+L + R  +E+ A  R   + LM    RD      +   G          + A   + RS   L ++RR + ETE VG  ++G+L SQRE+LLR+   V++T     +ARR+L ++ R+   ++ LL++VIL L GAI  VV
Sbjct:    2 ASEEFDSYAEQFEGIREDLKRAVATLSSGPADGSAAAREAYRRDAAQAKRLVRDAEGTVQAMELEARSVAPSEKRRLTGRIRTYRAELSAARTDLER-AQTRGDRDALMAGGSRDAVSRESASQRGRI--------EEATARMDRSTAVLEETRRTVMETEEVGVGIMGNLHSQRETLLRAHDKVKETNRLTTRARRVLNNIKRRACYNQALLWVVILFLLGAIGAVV 220
[Close]
BLAST of mRNA_F-serratus_M_contig704.18239.1 vs. uniprot
Match: D8TSD7_VOLCA (Qb-SNARE, VTI1-family n=3 Tax=Volvox TaxID=3066 RepID=D8TSD7_VOLCA)

HSP 1 Score: 67.8 bits (164), Expect = 4.700e-9
Identity = 59/223 (26.46%), Postives = 117/223 (52.47%), Query Frame = 3 
Query:   96 FKAHEESYHRCSQAINRHINGLQL--GTVEAVAAEDLPADLVEAEQHVKGMEIEVRSMRGSERRQCQSRANQCRADLKSLRKSVEQQAAQRAQAEELMRRRDGSEGRPSGMTGEWSGGGALGPD---VAQQSLARSRLSLLDSRRVLDETEGVGRRVVGDLESQRESLLRSQAHVRDTEGAAVKARRMLRSLSRKEFRHRLLLYLVILILAGAIVLVVYLKIR 749
            F  +E  Y   S  I+R IN      G  +     ++ AD+ EA+  +K M++E RS+     +Q Q++  + +ADL SLR+ + + A   A +E    R + S+    G+  +++       D    A   L +S   L   +++L ETE +G  ++ +L +QRE ++ S+  +   +    KAR++L ++SR+  +++L+++ +I  L   I++++Y K++
Sbjct:    8 FHQYENEYCNKSTDISRKINSAITLSGETKRKKLVEVDADIKEADNIIKKMDMEARSVAPERSKQLQNKVKEYKADLASLREQLTK-ARTAAGSEYDAARAELSQNISQGLGIDYASSSQAQRDRMLSASAKLEQSNDRLQTGKKLLAETEELGSGILANLAAQREVIIHSRDTLHGADDNISKARKILSNMSRRMLQNKLIMFGIIGFLLAGIIIIIYFKVK 229
[Close]
BLAST of mRNA_F-serratus_M_contig704.18239.1 vs. uniprot
Match: A0A5J4YBA6_9CHLO (Qb-VTI1-family n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YBA6_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 1.680e-7
Identity = 62/226 (27.43%), Postives = 108/226 (47.79%), Query Frame = 3 
Query:   96 FKAHEESYHRCSQAINRHINGLQL--GTVEAVAAEDLPADLVEAEQHVKGMEIEVRSMRGSERRQCQSRANQCRADLKSLRKSVEQQ-------AAQRAQAEELMRRRDGSEGRPSGMTGEWSGGGALGPDVAQQSLARSRLSLLDSRRVLDETEGVGRRVVGDLESQRESLLRSQAHVRDTEGAAVKARRMLRSLSRKEFRHRLLLYLVILILAGAIVLVVYLKI 746
            F  +E  Y   S  I+R +  L      V  +  +++ A+L EA+Q ++ M++E RS    + +Q   +  + +ADLK + +   Q        AA RA+        D S G+   M                + L ++   +   R  L ETE +G  ++ DL  QRE++  +Q  +   +    KARR+L S+SR+   ++L+++ + L+L G+I LV+Y KI
Sbjct:   12 FNQYESEYCSKSTDISRKVQALSSFSADVRRLRTKEIEAELKEADQILRRMDMEARSFSQEKSQQLMRKVKEYKADLKKITEDSRQAQGAASGGAAARAELGLADNYYDTSAGQRERML------------KTTEKLDKTSDRISQGRAQLAETEELGVSILQDLHRQRETITHAQDTLHGADDNIAKARRVLASMSRRIMTNKLIMWGICLLLVGSICLVLYYKI 225
[Close]
BLAST of mRNA_F-serratus_M_contig704.18239.1 vs. uniprot
Match: UPI001884A58A (vesicle transport through interaction with t-SNAREs homolog 1A-like isoform X1 n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884A58A)

HSP 1 Score: 62.8 bits (151), Expect = 2.110e-7
Identity = 65/226 (28.76%), Postives = 106/226 (46.90%), Query Frame = 3 
Query:   90 STFKAHEESYHRCSQAINRHINGLQLGTV--EAVAAEDLPADLVEAEQH--VKGMEIEVRSMRGSERRQCQSRANQCRADLKSLRKSVEQQAAQRAQAEELMRRRDGSEGRPSGMTGEWSGGGALGPDVAQQSLARSRLS------LLDSRRVLDETEGVGRRVVGDLESQRESLLRSQAHVRDTEGAAVKARRMLRSLSRKEFRHRLLLYLVILILAGAIVLVVY 737
            S F  HE  Y   S  I   IN +Q  ++  +AVA     A+ + AE H  ++ ME+E R      R+   +R     A+L+ L K  +    +  +AE L                    GGA     A++ +  + L       L +  R+  E+E +G  V+GDL SQRE+LLR+++ +RDT+    ++ R+L  +  +  ++R+LL LV  +L  A+   VY
Sbjct:    9 SIFTEHEHLYSVLSAEITDKINIIQGHSITGDAVAGPCAEAERLMAEAHELMEQMELEAREQPDELRQALANRVRSYSAELRRLNKEYQNIKHRVCRAEVLE-------------------GGARSATAAERLMDDTELMERTGGRLDEGYRMCLESEAIGAEVLGDLSSQRETLLRTRSRLRDTDSELGRSSRLLTGMMHRAMQNRVLLLLVAAVLLAAVGYAVY 215
[Close]
BLAST of mRNA_F-serratus_M_contig704.18239.1 vs. uniprot
Match: A0A0D2UHB8_CAPO3 (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UHB8_CAPO3)

HSP 1 Score: 62.8 bits (151), Expect = 2.550e-7
Identity = 52/205 (25.37%), Postives = 115/205 (56.10%), Query Frame = 3 
Query:  168 GTVEAVAAEDLPADLVEAEQHVKGMEIEVRSMRGSERRQCQSRANQCRADLKSLRKSVEQQAAQRAQAEELMRRRDGSEGRPSGMTGEWSGGGALGPDV-AQQSLARSRL------------SLLDSRRVLDETEGVGRRVVGDLESQRESLLRSQAHVRDTEGAAVKARRMLRSLSRKEFRHRLLLYLVILILAGAIVLVVYLK 743
            G     A + +  ++V+A++ V+GME+E+++     R + Q++    + +L  ++K + +        ++L+    G+ G P+G      GG +   DV AQ +  RSR+             L +++RV  E+E +G+ ++G+L +QRE+++R +  + +T+    ++RR+L  +  +  ++RL++Y+++L+L G + +VVY++
Sbjct:   34 GEQRKAAIKAVEKEIVQADEIVQGMELELKNAPAQFRPRLQTKLKTYQNELARIKKEL-RGLTNSGNRDDLLGGGSGA-GSPAGF-----GGRSAYQDVEAQSNDQRSRILDSHDRLNRTTGRLDNAQRVAAESEAIGQDILGELGTQRETIVRVRGRLHETDDNLTRSRRILNGMYYRIIQNRLIMYIIVLVLMGILGIVVYMR 231
[Close]
BLAST of mRNA_F-serratus_M_contig704.18239.1 vs. uniprot
Match: A0A150GHM9_GONPE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GHM9_GONPE)

HSP 1 Score: 60.8 bits (146), Expect = 9.460e-7
Identity = 63/234 (26.92%), Postives = 108/234 (46.15%), Query Frame = 3 
Query:   96 FKAHEESYHRCSQAINRHINGLQL--GTVEAVAAEDLPADLVEAEQHVKGMEIEVRSMRGSERRQCQSRANQCRADLKSLRKSVEQQAAQRAQAEELMRRRDGSEGRPSGMTGEWSGGGA---LGPDVAQQS-------------LARSRLSLLDSRRVLDETEGVGRRVVGDLESQRESLLRSQAHVRDTEGAAVKARRMLRSLSRKEFRHRLLLYLVILILAGAIVLVVYLK 743
            F  +E  Y   S  I+R IN      G        ++  D+ EA+  +K M++E RS+     R  Q++  + +ADL SL+             E+L + R           G++    A   LG D A  S             L +S   L   +++L ETE +G  ++ +L +QRE+++ S+  +   +    KAR++L ++SR   +++L+L  VI  L  AI+L++Y K
Sbjct:    8 FSQYENEYCNKSTDISRKINTASTLSGDARRKKLSEVDVDIREADNIIKKMDMEARSVAPERSRNLQNKVKEYKADLASLK-------------EQLTKARS--------TAGDFESARAELGLGMDYASSSQAQRDRMLSGTAKLEQSNERLQTGKKLLAETEELGTGILANLAAQRETIIHSRDTLHGADDNISKARKILSNMSRVMLQNKLILIGVIAFLLTAIILIIYFK 220
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig704.18239.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5KSL6_9PHAE1.990e-8869.26V-SNARE domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835ZAL4_9STRA1.510e-3038.28Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A0G4FLB7_VITBC1.000e-1430.25t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S0WIR7_9CHLO5.170e-1128.63Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A7S1C7L7_9STRA2.500e-1031.58Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
D8TSD7_VOLCA4.700e-926.46Qb-SNARE, VTI1-family n=3 Tax=Volvox TaxID=3066 Re... [more]
A0A5J4YBA6_9CHLO1.680e-727.43Qb-VTI1-family n=1 Tax=Trebouxia sp. A1-2 TaxID=26... [more]
UPI001884A58A2.110e-728.76vesicle transport through interaction with t-SNARE... [more]
A0A0D2UHB8_CAPO32.550e-725.37t-SNARE coiled-coil homology domain-containing pro... [more]
A0A150GHM9_GONPE9.460e-726.92t-SNARE coiled-coil homology domain-containing pro... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig704contigF-serratus_M_contig704:149218..163388 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score291.6
Seed ortholog evalue3.4e-76
Seed eggNOG ortholog2880.D8LHK7
Preferred nameVTI1A
KEGG koko:K08493,ko:K08494,ko:K10406,ko:K18749
KEGG Pathwayko04130,ko04138,map04130,map04138
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000149,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000331,GO:0002576,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005767,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005776,GO:0005783,GO:0005789,GO:0005794,GO:0005798,GO:0005802,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006887,GO:0006888,GO:0006891,GO:0006892,GO:0006896,GO:0006904,GO:0006906,GO:0006914,GO:0006996,GO:0007030,GO:0007033,GO:0007034,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008200,GO:0008283,GO:0009056,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016247,GO:0016248,GO:0016482,GO:0017081,GO:0019869,GO:0022406,GO:0030133,GO:0030134,GO:0030135,GO:0030136,GO:0030139,GO:0030141,GO:0030173,GO:0030424,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031091,GO:0031093,GO:0031201,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031901,GO:0031902,GO:0031974,GO:0031982,GO:0031983,GO:0031984,GO:0032010,GO:0032501,GO:0032588,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0033365,GO:0034613,GO:0034774,GO:0036477,GO:0042144,GO:0042147,GO:0042175,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043679,GO:0044237,GO:0044248,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045324,GO:0045335,GO:0046903,GO:0046907,GO:0048193,GO:0048278,GO:0048280,GO:0048284,GO:0048471,GO:0050789,GO:0050879,GO:0050881,GO:0050882,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051649,GO:0055037,GO:0055038,GO:0060205,GO:0060341,GO:0061024,GO:0061025,GO:0061919,GO:0065007,GO:0065009,GO:0070013,GO:0070382,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090161,GO:0090174,GO:0097458,GO:0097576,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098827,GO:0098852,GO:0099106,GO:0099503,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0150034,GO:1903076,GO:1903827,GO:1904375,GO:1905475
EggNOG free text desc.vesicle fusion with Golgi apparatus
EggNOG OGsKOG1666@1,KOG1666@2759
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-10_002250.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04131,ko04812
Exons4
Model size1925
Cds size717
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig704.18239.1prot_F-serratus_M_contig704.18239.1Fucus serratus malepolypeptideF-serratus_M_contig704 150379..163341 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932163.523435-UTR-F-serratus_M_contig704:149217..1503781622932163.523435-UTR-F-serratus_M_contig704:149217..150378Fucus serratus maleUTRF-serratus_M_contig704 149218..150378 -
1690964178.1038113-UTR-F-serratus_M_contig704:149217..1503781690964178.1038113-UTR-F-serratus_M_contig704:149217..150378Fucus serratus maleUTRF-serratus_M_contig704 149218..150378 -
1622932163.607326-UTR-F-serratus_M_contig704:163341..1633881622932163.607326-UTR-F-serratus_M_contig704:163341..163388Fucus serratus maleUTRF-serratus_M_contig704 163342..163388 -
1690964178.178328-UTR-F-serratus_M_contig704:163341..1633881690964178.178328-UTR-F-serratus_M_contig704:163341..163388Fucus serratus maleUTRF-serratus_M_contig704 163342..163388 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932163.541044-CDS-F-serratus_M_contig704:150378..1506581622932163.541044-CDS-F-serratus_M_contig704:150378..150658Fucus serratus maleCDSF-serratus_M_contig704 150379..150658 -
1690964178.124392-CDS-F-serratus_M_contig704:150378..1506581690964178.124392-CDS-F-serratus_M_contig704:150378..150658Fucus serratus maleCDSF-serratus_M_contig704 150379..150658 -
1622932163.5571973-CDS-F-serratus_M_contig704:151230..1513671622932163.5571973-CDS-F-serratus_M_contig704:151230..151367Fucus serratus maleCDSF-serratus_M_contig704 151231..151367 -
1690964178.1366365-CDS-F-serratus_M_contig704:151230..1513671690964178.1366365-CDS-F-serratus_M_contig704:151230..151367Fucus serratus maleCDSF-serratus_M_contig704 151231..151367 -
1622932163.5765834-CDS-F-serratus_M_contig704:154965..1550821622932163.5765834-CDS-F-serratus_M_contig704:154965..155082Fucus serratus maleCDSF-serratus_M_contig704 154966..155082 -
1690964178.1499867-CDS-F-serratus_M_contig704:154965..1550821690964178.1499867-CDS-F-serratus_M_contig704:154965..155082Fucus serratus maleCDSF-serratus_M_contig704 154966..155082 -
1622932163.5928729-CDS-F-serratus_M_contig704:163158..1633411622932163.5928729-CDS-F-serratus_M_contig704:163158..163341Fucus serratus maleCDSF-serratus_M_contig704 163159..163341 -
1690964178.1692336-CDS-F-serratus_M_contig704:163158..1633411690964178.1692336-CDS-F-serratus_M_contig704:163158..163341Fucus serratus maleCDSF-serratus_M_contig704 163159..163341 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig704.18239.1

>prot_F-serratus_M_contig704.18239.1 ID=prot_F-serratus_M_contig704.18239.1|Name=mRNA_F-serratus_M_contig704.18239.1|organism=Fucus serratus male|type=polypeptide|length=239bp
MEPLGYESGPSRAMSTFKAHEESYHRCSQAINRHINGLQLGTVEAVAAED
LPADLVEAEQHVKGMEIEVRSMRGSERRQCQSRANQCRADLKSLRKSVEQ
QAAQRAQAEELMRRRDGSEGRPSGMTGEWSGGGALGPDVAQQSLARSRLS
LLDSRRVLDETEGVGRRVVGDLESQRESLLRSQAHVRDTEGAAVKARRML
RSLSRKEFRHRLLLYLVILILAGAIVLVVYLKIRRHLK*
back to top

mRNA from alignment at F-serratus_M_contig704:149218..163388-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig704.18239.1 ID=mRNA_F-serratus_M_contig704.18239.1|Name=mRNA_F-serratus_M_contig704.18239.1|organism=Fucus serratus male|type=mRNA|length=14171bp|location=Sequence derived from alignment at F-serratus_M_contig704:149218..163388- (Fucus serratus male)
GTTTCATCACACACATAAGAAAACATCAATCAACAATTTTCGCGATAATG
GAGCCTCTGGGCTACGAGTCTGGGCCGAGCCGCGCGATGTCAACGTTCAA
GGCTCACGAGGAAAGTTATCATCGTTGCTCGCAGGCTATCAACAGGCATA
TAAATGGGCTCCAGCTTGGCACGGTCGAGGCGGTCGCCGCGGAAGACCTC
CCGGCCGACTTGGTCGAAGCTGAACAGCACGTGAGTTTGTTCAGTAAGTT
TCTCTCGGGTGAAAAAGGTGTCTACTTGAGGATCAACGAGATGAGTCAAG
TTGCAGTTTTCGTTTAGACGAGGGATTAACCAACCGAGAAAGAATTAGGA
GGTGAGTGTGGAGCCCGTGAAGTGCACGCGGTGATAATGCTTCAAGCGTG
GCTGCTGATTTATCGGGGACACTCTCGTCGCTCACTACCCTTCTCGAATA
CCCCAGAACACCCAGACTCAGGTTGAACGCGCGATCAGGCCGGGGCCCAG
GATGGTTATTTATTTTCCAAGTACTTATAACACGCGTCAAGTAGGCCACA
ATGCTTGCAGATTGCAACGGGATGCGAAGGAGTAGAATATATCCGAACAC
TGTAAGGTATATGCATGCTCGGCGAGGTCTCTGCTCTGATCGGCTATGGT
GTTGTTTCAAATTGTAGTACATTACCACGTACGGAGTAATCAGTCAAACT
ACCCCGTTTTAAATATAATCCCCCAATTTCTCCGACATATCTGCGCGAAT
CTGCGCGATGCATTGTTAGCACTCGTAGGAGGTAATCCCTAATCTATTTG
TATGGTACCGCAGTTCGAGTACGTACCTGTATTACAATCTACAAACAGTA
CTAGCCTAGTACTCCGGAATACTCTACAGGCACGTACTTCGTATCTTGAC
ATCTGTACCACATACAATGCGCCTGTACGTACCGAGGGGGCGATCGAACT
GCTTTCGGAGCTCTGTGGTCTTGGTCGCAGCAGCTGCAACTACTGTAATG
ATACGGGTGGCGTATCATATAGTCTAGGCAACAATTCGACATTTTTTCCC
CTGACTGGGGGATGCGTTCAGATTTTTCTCGTCTTTTGAAACACAGAGTC
AGTACAGACACAAAATATGGAAATGTAGTCTGCACTCTCGTTGTAGCTAT
GATAGTCTCATACTGGCTCTCTATGTACAGTACAGACGGGAAGTTCCCCG
GACACATATACACAGTACTCTAACCCGACAGTACGTTTCAGTTGTTTGAG
CCAAAAAACTACTCTTTTACTCTGTTTATGAAGAAAATACAGAACGCACC
TAGACCTTTTGTTGTTGTTGTCTTCACATTAAAAACCGTTCCGATCTCTG
CTCAGTACCTTCCAACATCCGTACTGGTCCAACTGAAGCGAACGCCTTCC
GTGGTCACAGGCCAACTACCCCAAAAGGGTATATATTATGAGAAATGAAC
GACAAATAAAAGGACCCAGAGAAGTCAACACACAGGCGATAATAGGAACC
CCCCTCCCTCCGAAAAAGAAAAAAGAAAAAAGGGGATAGATAAAGCCCAT
CGCTCCCACTCGACACGCGAAGCCAAGCAAAATTAAAACAAACGAAAGTA
ATCAAGGATCACCAACCAAGACACACATGATTATATCCTTGTACCCCTAC
TAGGCCGGGGTGTATCCGCCGCCGGGTTTGCACCGGACAGGCCATGTGTG
TGTGTGTGTGTGTGTGTTTTCTTCCCATCCATTCTGGACATCAAGTTGGA
CGTACCAGCCGGGGTCACACAGGAGGAAGGTCACACAGGATTTTTCATCC
ACCTTCCTTCTGCGGTGCGTGCCTTGATTTTTGTCGCGAGAAAGATTCAG
CCATTCCTTTCCCTCGTCGACCGTGAAGTCGAATTTTGTGTACTAACGAA
TTAATCGTTCTCCACCCGTTGGGCATTTTTTATTTTGGTTTTTTAGTTTT
TAGTGAGAAAAATCCCGTTTGCCAGGATCGAACTCACGTCCCAACGTGTC
AGAAGGTTACGAGGTGCCTACTGAGCTACCGGGGTCGACCGGCGTACAAG
TTGTTTATTAAAGAAAATCAGAACAGCAGCTAGACCTCTTGATGTTGTTG
CTGTTGTTGTCTTCACAAACAGCACATTGATTGTGTTTAAAGAAAAATGC
GATTGTGTTGTTGTTGTCTTCACATTAAAAACCATTCCGATCTCTGCTCA
GTACGATCCAAAAATTACTCCCAATGTTCCGCCAATATTCCCACCTAAAC
CTTTTGACTGATCGGAAGGTTTCAAAAGGTTTATAGATGCGTTCAGATTT
TCTTTAAACTCCCAATGTCCCGTACAGACGACGGGAGGTTCTTCGCCGGA
ATGACAACTGCGTTTCGTTTTTACTGGGTATGGTTGAGGCCCGATCGGTT
AAGTCACAATATGCCGTGCCGGCTGGAGTGTGTTTGCTCGACATATTTCC
ATAGACGGTTGCTCTACAAGGGACTGTAATGATTTCTGTAATACCGGGTA
CATAATGTTTTTTCCTGTAAAGCTGCTTGCTTGCTGCATGCGTCCGGTTA
ACGGCAGTACATCTACGTCAAATACGTACGAAGTACTTTCTGGCCTCGAA
ATGAAAAAAAAAACTCACAAAATGTGTTCCCACTAATTTATACATCCAAA
AAGTTTCCATGTATGTGCCAGACTTTTTCATTTTCCATTTTTCGCTGTTC
AGCAGACCACGAGCGGGATTGACCACCGTGTAAAGTAGTTTTTCGAGTTG
GCAACCAAAGCGCTGAATGTGAGAAACAGACACAAAATATTTTTTCCCCC
TACCGGGGGCGGATCAGAAGGTCTAGGTGCATCCATATTTTTCTTTAAAT
ACCTCCCGTGAATCCGATTCACTTTTTTTTTTTTTGTAGAACGCGCCTAT
TCATACAGTAGACCAGTCAAGGGAAAAAAATGTCAAAGGGTTTAGGTGGG
ATCAAAGGCTGCAAATACAAAACCTCTTCATGGCATTCAAACGGGTTCCC
CGATGGTAGTAATTTTGGGTCAACAGTATAATGTCGGGGAGAAGCCCACC
GTTATCCTGTACACTAACATCAATCGCCATGCAGGGTGTTTTGTGTTTTT
TTGTTGCTCCTTTTATTAATGGATGTTCCTCTGATCTTGTTGTGTACAGC
AGACCACGTACCGGATTGACAACCACGTACTTAAATTATAGTGGGTGTGG
GAAGGAGAGGCGGATATTAATTGGTCCATGGTGAGCTACCTAGGCAGCAC
TCGTACGGAACTACCTTGAGGTTTACTGGTCTCGTGCCGGCGTACTCTCG
GCAGTGAACGCTATCGGTACGCAATTGCATGACCCGATAAAGTCGGGACT
GGTCCTATGGCGTATGGCGGTTATAAATGAATAAATGGCCGCCGCCGCGG
AACTCGGGAGGAATCCCGTAAGTAAGCACCGGATTCAGCCTGAGTGTGGA
GATGAACAGGCTGACGCGGGACGGGACTGCCGAACGAGTCTCGCGAGACC
AAATCCTCAGGCACGAACGCGGACAGAGAAATATTAATTTTCACTGTTCA
GCTGACCACGTGCAGGACTTGCAACCTTACCCGGTTGATCTATACTCTTG
CTATATGTGTGACCATACATACATTAGACTACTGGGTATCGTAATGGCCC
GGTCGGTTAATGTGAAAAAAACACACTATTAATAATACTATTTGGTACCA
CTAGTAACTAGAAATCACTGTATTAATATATGCAAAGCTTGTCTTTACAG
CCTATAACCCCACCTAAACGTTTTGACATTTCCCTCCCAGACTGGGGTAT
AGTATAGTATAGTATAGTCTAGATGCGTTCAGATTTTCTATTAACTCCTC
GTGACTTTTGTGCTCGACAAGAAGGAATCGGTAATACAAGTACATATTTG
TCGGGAAAAGCGACATGTCCGAAGAAACTAGACAAGAGAGGACGCAGGCA
ATTAGTTGTTAGGTAACTGCGTGTGGCTGTCGGGGCACATGCATGTGTGT
ATGTACGTATGTATGTATGTATGTATGTATATTCATCACATATAGCAGAG
TATGGATCAACCGGGTAAGGTTGTCAACCCTGCTCGTGGTCAGCTGAACA
GGGAAAATGAAAATTCCCCGGTCCCCGAGCGTGCCTGAGAATTTGGTGCA
TGTCGCGGAACAATTGGACGAAGAGCCCGCGGATTCAATGAAAGACGAAA
ACGAAAACAAGATCAAAAACAAATGAAAGAAACTAATGTGACGCCGAAGA
AAGGCGACATGTCGGCAAACCAGAAAAACGCCCAGAGGATACAAGTTCGC
GCCACTTCTGACTTTAATCAACTGTGGCGAGCGAACCAGGACGAGCACGC
TTACTTCTGACTTTTGTATCTTTGGTCCTTCCCGTCACGTTCGGGCATAC
TACTACATGCCGTAGTCCAGTCTTGGCTTTATCTGCAGAAATCCATTTCG
GCATGGAACGTTGCGGCCCTTGTTCCGCCGTATTGGACCGTTCCTACTCG
CCCTGGGCTGCAGTCGTTCACTGGTCGGCGTTGATACCGAAAGCTCTGAG
GTCGTCCAGGAGACACCCCATCCACTCTTTTTTCTTCCCCTCCACGCAGC
CCGCGCCCCCCACAAATTATCCGAACATCACGCACTTCGGCAGTATCGTG
GCCTCCGTGCGCGCCACCAATCCCACGAACAGGATCCGCCTCCTGCGCAT
AACCACCAACCGCATCGATGCTATCACTTCCCGTCGTCATAAGCGTGTCC
AGATAGAAAATCGGGTGGTCGATGCGATTATTTTTTCGCCAACCCGTGCA
GCGAGTCACGAAGTTGTGGTGGGCTCGGCGCCTCGTGTCGTAGTGCCATG
CGCGTGGGCTCCACATGACGCAGCCTTACAATATTGTCTCGAATACCCCG
GCTCTTACTTAGCATCCGGATTTTGAGCTCGAGGGGGAGCTCTCGGCCGT
CTCGTACAGTTCGAGGGTGTACTTCCGGAAGCTGCACCATGCGTTGCGTA
TGCGCCGGTCGACCTCGATGGACAGGTCGTCTTTGTGGTTGATGTCCCCG
CCCCCCCCCCCGAGGTACACGAACTCGTTCGTTAGGTTGTACACCTGGCC
GGCTGCCTCTACGTTGAATATGTCGGTAGTATATAAAGTAAACATATGAT
TTCAGTATTGGCCTCCGATCCGGTGAGGCCAAACGCCGCGCACACGACCA
CGATCACGATCACTCCTATCATCCTCCTCAGCTGCTCGAGCGATTTCGAG
ACGACTTCGGCATCGTCAACGTAAAGCATGCCCCAAAGCGACGTCTCCAG
GGCCGGCTCTCCGGCGGTTGCTTCCCATGTTCAGGCATTGTTGAACACCG
TCTGTTCTCTCCGCCCCCCCCCTTTCCCCTGTTCCCTAAATTACTTGACT
CAAAAGCACAAAACATACCTATAGAAAACATACTCATATTGGTATACCAG
TACGTAGTTGTTCAGACTGTGCCCCCTGTTCCTATAGTACTGTATTATAA
TTCAAGTATAATCGCAAGACAGCTTGCCCCCCCTTTACAGACATGCAGTA
TAACAAACATGATACGTAAAAGTAATTAATTCCCCGGGTACAGCAATTTG
CAGCCATGGTAAAAAGTTTTAATGTATTAACATTTTCTGCCAATCTTACA
ATATCATAGTTATTTTCTACACTGAAACCTCATATTGTGTTGTAGTATCG
TTCGATGACAGACTATTATCGTATATTATTACAAACTGTACTGTACGGTA
TTGTATGGTCACACATATAGCAAGAGTACGGATCAACCTGGTAAGGTTAC
CAATCCTGTTCGTGGTCAGCTGAACAGGGAAAATAATATTCCCCTGTACG
CGTTCGTGCCTGAGAGTTTGGTCTCGCGAGACGGTTTCGGCAGTCCCGTC
CCGCGTCAGCCTGCTCATCTCTGTAATCAGGCTGAATTAATTATGTACCA
CAAACCCAATGAAACAAGCCCTTTCCTTCCTCCCGTGGTAAGCCTTACCC
CCAGAAAAAAACATGTATGTACCACTACCGATACCCTTCCTCGCCGATAC
TTTCAAGATTCCCACTTCATACCAATAGTGGGTGTGGGAAAGAGAGGCGA
ATATTAATTGGTCCATGGTGACCTGCCAAGGCAGCACCCGTTCGGAACTA
CCTTGAGGTTTACTGGCCCTGTGCCGGCGGACTCTCGGCAGTATGTATAT
ATGTATATATGTATGGAACGCCATCGGTACGCAACTGCGTGACCCGATAA
ACTCGGGACTGACCCGATGGCGTATGGCGGTTTCATAAATGAACGCCGCC
GCGGAACTCGGGAGGAATCCTGTAAGTAAGCACCAGATTCAGCCTGAGTA
TGGAGATGAGCAGGCTGACGCCGGACGGGACGGCTGAACCCGTCTCGCGA
GACCAAATTCTCAGGCACGCACGAGGACAGGGGAATATTCATTTTCCCTG
TTCAGCTGACCACTATTACTATTAGAGCAGGATTGGCAACCTAACCTTTC
CCGGTTGATCCATACTCTGATCTATATATGTGTGACCATATCTCTTACTC
GTGCTGTCACAAATGTAAGATATAGTGTGAAATACAAGCTCCACAAGCGC
TACTGGTAAGTATGTACCGTATAGTATTGCTAATAATAATGGAAAATCTG
GAAAGTTTTCCATTATCACCTCTATAGACTTCCTTCATCGACACCCATCC
TACTGTATCCTAGACCTAATAATAATGGAACAAATTGAGCTGTATACTAG
CTTATCGTGCCTTTTATAATTGTTGTGTTTTGGTGTCTCTGCATGGCGAT
TAGTTTGAATGTACAGCACAACGGTGGGTTTCTCCCCGACATTTTACTGT
TGACCCAAGCCCCTATTGGTGTATGAATATGGTTCGATGGTATTATTATG
GTATATTATTACTACCTTTTTTATTATGTCTACCGGTCGCCCCGGTAGCT
CAGTAGGTACCTCGTCACCTTCTGACACGTTGGGACGTGAGTTCGATCCC
GGCAAACGGGATTTTTCTCACTAAAAACTAAATAACCAAAATAAAAATGC
CCAACGGGTGGAGAACGATTAATCCGTTAGTACACAAAATTCGACTTCAC
GGTTGACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGATAAAAATTAAG
GCACGCACCGCAGAAGGAAGGTGGATGAGAAATCCTGTGTGACCTTCCTC
CTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCAACAAACTT
GATGTCCAGAATGGATGGGACGAAAACACACACACACACTGTTTGTATTG
TCTTTTGTTTTGTTGTGTTTGGTGACCCGGCATGGCGATTAATGTAAGTG
TATAATATGATGGTGGGTCTCTCCCCGACATTATACTCTTGACCTAATGT
TACTGCCATCGGGGAACCCGGTTAATTGCCATGGAGAGGTTTTGTATTTG
TAGCCTATGAAGCAACAATTTCATACACATAGTAGAAAGTTCCTACGGAC
TTCTTGTATCATAACACGTTAATGTATTTCTCTTCACCAATTACAATATT
GTAACGTTTCTTGTGTTCTAGAGTATACCTGGTAGGCCCTTAATGTGTAA
GGGTCGATGGCACTATCATTGTAGATAATTATTAACCTATTTAATTATGT
ACTAGTCTGCAATGTTTTTGTTTTGTTTTTGTCCGGTGTCCATGCGCGGC
GATTAATGTAAGTGTACAGCATAACGGTGGGTTTCGCCCCGATATTATAC
TGTTGACCCAAGGTTACTATTAATACCCGTTTAAATGCCATGAACAGGTT
TCGTATTTGAAGCCTATGATCCCATCTAGACGTTTTAACAGTTTTCCCCC
TGAATTGAGGATACTCAGAAGGTCTAGGTGCGTTCAGATTCTTGTCTATG
TTCAGACTGTGGCCCCTGTTCCTATACCGTAAGAAACATCACCCGACCAT
CTTGATACGGCTCTAGATAAATTATTAGGCTCTAGAGTACTAGGAGTATT
ATGACTTATACTACTGTATTATAGTACGAGTACCATTACCAGACAGCTTG
TCCTTCCTTTACGGACAGGTAGTATAACTGAATAGGATACGGCAGTATAA
CGGACAGGATGCGGCAGTATAAAGAACAGGGTACGTACAGTAATTAATCC
CCCGGGTACCCACTTCCACGGTACGAAAAATGCTTGTCCCGTACGTGTGC
TTTACGCATATAGTCTACTGGTACAGATGTAAAATTGGGGGGGAGACCTT
GTACGAGGTGAGTAACTGAAACCGCCCTCTTCTTTCGTAATGGGTGATAC
CTCCAGGTGAAGGGCATGGAAATCGAGGTTCGGTCGATGAGGGGGAGCGA
GCGGCGCCAGTGCCAGAGCCGAGCGAACCAGTGCCGGGCGGACTTGAAAT
CGCTCCGCAAGAGCGTGGAGCAGGTGATACCTGACTGATTTCTGATTTCA
CTAACGAATGATCTATTCTGTACCGGTACAGCACACGCAGTAAACTCGAG
GCGTCGCTGTTTTTTGTTGTTGCCGCTATGTTGTTGTTTGTCACTTTTTA
ACGTATCTCCCATTGGGCATCAATGTCAATCCAGCTCCGCCCCTGAGAGT
TTGTTGTCTTTGCGAACTATTGTTACTGTACTGTCATTAAGGTGTAGACG
ACCCTTCCGTACCCCCCCAAAAAATCTGTAGGTACAGTAAGAAAGGATCC
AGCCAGAACAGGACGTGATCTTTGACCATATTATTTTTTTCACCACTTAC
AAATTTTTATCCCTACAGCCAATGTTCCCTCCTAAACCTATTGACTGATT
GGTAGGTTTGGATGCATTCAGGTTTTTATTTAAACTTGAAACAGCGTGCA
ACCTTTTGGGGGTACAAACGAGCTTAAGTTCGCGTACGACGCTGAGAGTA
GAAATATGTCATGAGTAGAAATATGATATGAGTAGAAATATGAAATGATT
ATAAATATGATATGATTGGAAGTATGATATGATGTGATATATGATATGAC
AAGAGATATGATAGGATTCCTCTCCCTTCTCCCAAGATCGAAATACACAC
GCGCGCGCACACACATCACGCTGACCTGTGCAACATGTACGTGCATTAGT
TACCACAGGTACAAAATGAAGGGAGTTGTACAAAGTCATTGTATGGTCAC
ACATATAGCAAGAGTATGGATCAACCTGGTAAGGTTGCCAATCCTGCTCG
TGGTCAGCTAAACAGAGAAAAGAATATTCCCCTGTCCGCGTTCGCGCCTG
GGAATTTGGTCTCGCGAGACGGTTTCGGCAGTCCCGTCCCGGAAATCTTG
TGTACGCACATATTTGTGGTAACGAACCAATCCGAACTGCACTATGAATA
ACTGCTCTCAGACCTTCCGAGCATCCATGCACACCTGTGATAAAGTTACT
AGTAATATTACACCACAGGGTAAAAGTCAAATGGCAATTACCACTCTCGG
TAATCAGTCCTTATAACACTCTCCACCCACAGAATTTGACTAGCCGGTGA
TGAAGCGGACTAGTTCATTCGATAAGGTTTTGAGTGTCGGGAGCATAATC
GCATTCTTTTCCATACGGGGGTTAGTACAGTTTTTTCATCTCCAACCGAT
ATTCTGCCCCGGAATTCGGTAAGGTGAAGAAGCGAGCTCAGCGGAATTCG
AAACCGGTCCTACCGTCGACGCTAGTTTGATAAGGTTACTAATACACAGA
ATAAAAGTCATTTGACAAACCGCCACTACTGTGTAGGACTATTAATATTA
ACCATTAATACAAATATCCGTGTTGAGGACCCATCGCGCTCTCTTTAGCA
AGATCATGCTTACACAGCATCGCAGCTCTACTGAAATAGGGATTAGAGCT
CGCTCCCGGACTCTCATGTGTGTATGTATGGTCATCACATACAGCAGAGT
ATGGATACAGTAGCACGGAAAATCGCTGCCAAGAATCGTTATTCGTGCAA
GCATAGCTGTAGCTGGCATCAAGTTCCTGGTAATTTTGCAGCGAGTCTAA
AGTAAGATGCTATAAATATTTTAAAATAGTTGGCGGTTTTTGCCATCGAA
AAGTGTACTTACTTCCGCGTTAGACTACGTATATATATACCCTGGTATAT
ATACAATATATATGTATATAAGTATTATATATGTATATCACTCGTACTAA
TAATATTAATACTTTGAATGTAATCTGGAATTCTGCCACGCATAGGGACT
GCTATAGGTACTGCTGTGGAAGGATATACATCGACATTATGTGCTGGTAT
ATTTGTATGGTCACACATATAGCAAGAGTATAGATCAACCGGGTAAGGTT
GCCAATCTTGCTCGTGGTCAGCTGAACAGGAAAAATGAATGCTAGATCCT
TGTCCGCGCTCGCGCCTGAGAATTTGATCTCGCGAGACGGGTTCGGCAGT
CCCGACCCGCGTCAGCCTTGTTTAAAGAAAATCTGAACGCATCTAAACGT
TCTGATCTGTCAGAATCTCCATACTTAGGCCAACCTTTATGGGAAACAGA
AACGACATGAAAATACAGAAATGTGAAATTTCTGTGGCGAAATTTCTGTA
AACGTGGCGCTATGGGCCCCGTGCCGCAGAAATGTAGCCCTACAGAAATG
GCGAATTTCTGTGGGACGTTATTTTTCTCTTCCCACATAGAGAAATGAGG
CTCATTTCTGTCTGTGGCTCGACAAGTTTAGTTTGCCGCAGAAATGTTTC
ACGCCTTCCAAGAACGATTGGGAGGTCGGGACTGTAGCATCCCTCCTATC
AAATATCGGCAAAGAAGAGCTCGCGAGTGCTGTTGTACGATGGGCGCTGA
GCAGCAGTAGTTGTGCGATGATCGCCGGAGCAGCAGATTTGGAGGAAATT
TATAGAATCTGTTGAGGTGATGGGCCCGGGCAAGCAGATCTGGAGGAAAT
TTATAAAAGCTGTTGAGGTGATGGGCCTGGACAAGCTGATCGCCGGCGGC
GGGGGCGGTTGAATGGGTGGCGCCGGAGATCAATCAAGCAGGGACGGGCT
GCGTGTCACGAGCGTCCGACGGCTCGCCATCGAAACGATGTCGCTCTGCC
CACTCTATTTGCGATGTACTCGTAATGAAGTACTAAACGACCCTGTCTCG
CCGGACTAAATTCTCGGGCACAAACGCGGAGAGGGAAATATTATTTTTCC
CTGTTCAGGTGACCACGAGCAGGACTGGCAACCTTACCCGGTTGATCCAT
ACTCGCCATGTGTACATACTTCCACCTGTCTTTGTGCGGTGATGGGTGGC
CGAAAATGCCGGGGTTAACCCGATATGCTCCCCGTTTTTTTTGTATTTTT
CCTTTATCCCATAAACGACCAACTACAGTTTTTCCCCACGGATTTTGGAT
TGTTTGGCCACAGAAATGACAAATTTCTGTATTTTGCGTTTCTGTTTTTT
CGTTTCCCATAAAGGTTGGCCTTAGGCTGAATCTGGAGCTTATTTACGGG
ATTCTTCCCGATTTCCGCGGTAGCGTCCATTATTTATTTAAACCGCCGTA
CGCCATCGGGTCATTCCCGAGTTTATCGGGTCACTGCTGAGAGTCCACCG
GTACAGGGGCAGTAGTCATAGTCCTCAAGGTAGTTCCAAACGGGTGCTGC
CTTGGCAGGTCACCATGGACCAACTAGTACGCGCCTCTCTTTCCCACACC
CACACTATTATTGGTATGAAGTGGGCATGTTGGAAGAACCGTACATGGAT
TGATCGAAATATAAATACCGCTAATACAGCACGCAAAATGCTCATCTGTT
CTGCACCACCGCCGATTGGTCCCTACGTGACATTCATGGTTGGGATCATT
CGGAGCCAGATCGTTTGGTCTACACAGGTACAGTAATTCACGGTACAGTA
TATTATAGCAGTAGCTCTATTATTAATAGTACTCATACCCCGGTAGTGAT
ATACCGGTACACGGGTCGTTCGTTCCAACGGCGTTTCTTGTTGCTGCCCA
TCCCCCTTGAACCTTTGGGCAACTAACTTATTTGCTGTTTGCGTGTGTCT
ATGTATCTTGTCTGTCTGGAGCAGGCCGCGCAGAGAGCCCAGGCGGAAGA
GCTCATGCGTCGAAGGGACGGTAGTGAGGGGCGACCGAGTGGCATGACCG
GGGAGTGGTCGGGCGGGGGCGCGCTCGGACCGGACGTTGCTCAGCAAAGC
CTGGCGAGGTGCGTTCGGTGGGGTGAGGTGTAACTGTGCGTGCTGGCGTG
GTATGATATCACGTTGCCCGGTGGAGTTGCTGTTCCGTAAGTATCGAAAA
GTCTTACGAGGTCTTTCCGGGTTTTCTTTTGATAGTTGGTGCACACGAAG
CACAAGCGGCAGGTAGGCGTTTGTTTCACATCAGGTAATTGCGCATGGTC
GAGGGGTTTGGACATCAAAGCTTCCCAAAAAAATCAGGAGCTGCTGCTGT
TACCTTTACAGAAAGCTGTTGTATGACCCATGGGTTGAAAAAGATGACCT
CATCCCGGCGGTTAAGCATATCTTCATACTCATACGAGTACACAGTAGAC
AGTACACATCAGTGTAGGGTAGTTAATACCCCGGAGTATACCGTACGCGG
CAAGTTAGAGTTAGCAGCGCATGCATGCCTTTCTCCAACAAGCGCTGGGG
TAGATCTATCTAGTACGAGCCCTTGTACATTTTGACCGGAGCTGCTCCGT
GCGAAATCTCGCGTCCGGCTGTCGCACCTCTCCTGCTCTTCTCCCGTCGG
GGTACCGTCTAACCGTGCCACTTTTGCCAGGAGTCGCTTGAGTCTGCTGG
ATTCCCGGCGTGTCCTCGACGAGACCGAGGGCGTTGGCCGCCGAGTCGTG
GGAGACCTCGAGTCACAACGCGAATCTCTCCTACGGTCGCAGGCGCACGT
GAGAGACACGGAAGGCGCCGCGGTGAAGGCGCGGCGGATGCTTAGGTCCT
TGTCGAGGAAGGAGTTCAGGCACCGCCTCTTGCTGTACCTCGTGATCTTG
ATTCTCGCCGGCGCGATCGTGCTCGTCGTCTACCTGAAGATTCGACGCCA
TCTGAAGTAACGCCAAAGGATGCGTCCGTCGCGTTAGGCGCTGCTTGGGA
CGAGGCCCGGCGGGCTGTTTTGCTGGCTGCCGATGAATATTGGTATATCC
TCTGTTTGGGGTATATATGTATATATGTGTATGTGTGTGTCTGTTGTTGG
GTACTCACGCGAGGCGTGTTTCACGATGTCAATCTTAAGGAAGAGTTTCG
AGATGCCGAGACTCTTTGTACTGTACTGCACAGTACAATACGAAAAAACT
ACGTAATTGTGCCAAAAAACAGTAGCAGCTTTGGGAGGACAGGACAGAGC
ACGCCTCGAGTATTTTTTTTCCCCGTCAGAAGATGCGGAAATCTTGTGCG
AGGACACGTACGAGAATTGAAAGCTGTTTCCCGAGGTGTCCTGTACACAC
AACATAAATGTCGACCTGTCGATTCTGGCGCGCACTGATCTGTTTGGTTT
CGGATGAAATGCGATAATATGCCCGGTAGTAACACATCTAGTAAATATCA
GCGGATGCCAAGGTCTACGAAAGGAAACGTCAGTGAATGGCCATGGAATC
GGAACCTGTCGTTGGGGAGGGGATTTCGGTTGGGCATTTGATGGACGTCT
TTCTACATGGGCTCGAGAGGGAGTTAGTTCATTTTAGTAGTGCGGCGATG
TGCTTGTCTACCCCCTAGCGCTATCAATAGTGTTCCGCCCTTGCCTTCAA
ATCAAATTCTGGGTCACGTCCGTAATGCGCCATAGGATTGAAAAATTATT
TTGAATTTTGACATGGTATCTTGGTCTCTGCAGGACAGTAGTGGACCATG
TCACGTACCCGAGGTAGGAGTTAGGCACAGGCTGCTTTAACTGTTTATAT
ATGCTTCGAGGGTATTATAGTCAATGGTGAAAATGAGATTAGCGTGGGGC
GCGGGTTTCATTAGTCTTTTCATCGAGAGGAGTAGCTGTTTTTGTACGCA
AAATACATTCCGCTTCCCACTACCCCCCCAACATCCACTCTGTATGCGAA
TATGTATGAAGCCGATAATTGAAAAATGTATTTTATAAGTGTGAGCCCTC
CAAAAACGCCGTCATTTTAGCTCGGAAACCCCACGCACCTGTGGTGCGTT
GGAGGCGAGAATCCCCCAGATATGCGAAAACATACGATTTCGAGTCGCGC
CATGAAAGTGTCCTACTAATA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig704:149218..163388-

>mRNA_F-serratus_M_contig704.18239.1 ID=mRNA_F-serratus_M_contig704.18239.1|Name=mRNA_F-serratus_M_contig704.18239.1|organism=Fucus serratus male|type=CDS|length=1434bp|location=Sequence derived from alignment at F-serratus_M_contig704:149218..163388- (Fucus serratus male)
ATGGAGCCTCTGGGCTACGAGTCTGGGCCGAGCCGCGCGATGTCAACGTT
CAAGGCTCACGAGGAAAGTTATCATCGTTGCTCGCAGGCTATCAACAGGC
ATATAAATGGGCTCCAGCTTGGCACGGTCGAGGCGGTCGCCGCGGAAGAC
CTCCCGGCCGACTTGGTCGAAGCTGAACAGCACATGGAGCCTCTGGGCTA
CGAGTCTGGGCCGAGCCGCGCGATGTCAACGTTCAAGGCTCACGAGGAAA
GTTATCATCGTTGCTCGCAGGCTATCAACAGGCATATAAATGGGCTCCAG
CTTGGCACGGTCGAGGCGGTCGCCGCGGAAGACCTCCCGGCCGACTTGGT
CGAAGCTGAACAGCACGTGAAGGGCATGGAAATCGAGGTTCGGTCGATGA
GGGGGAGCGAGCGGCGCCAGTGCCAGAGCCGAGCGAACCAGTGCCGGGCG
GACTTGAAATCGCTCCGCAAGAGCGTGGAGCAGGTGAAGGGCATGGAAAT
CGAGGTTCGGTCGATGAGGGGGAGCGAGCGGCGCCAGTGCCAGAGCCGAG
CGAACCAGTGCCGGGCGGACTTGAAATCGCTCCGCAAGAGCGTGGAGCAG
CAGGCCGCGCAGAGAGCCCAGGCGGAAGAGCTCATGCGTCGAAGGGACGG
TAGTGAGGGGCGACCGAGTGGCATGACCGGGGAGTGGTCGGGCGGGGGCG
CGCTCGGACCGGACGTTGCTCAGCAAAGCCTGGCGAGCAGGCCGCGCAGA
GAGCCCAGGCGGAAGAGCTCATGCGTCGAAGGGACGGTAGTGAGGGGCGA
CCGAGTGGCATGACCGGGGAGTGGTCGGGCGGGGGCGCGCTCGGACCGGA
CGTTGCTCAGCAAAGCCTGGCGAGGAGTCGCTTGAGTCTGCTGGATTCCC
GGCGTGTCCTCGACGAGACCGAGGGCGTTGGCCGCCGAGTCGTGGGAGAC
CTCGAGTCACAACGCGAATCTCTCCTACGGTCGCAGGCGCACGTGAGAGA
CACGGAAGGCGCCGCGGTGAAGGCGCGGCGGATGCTTAGGTCCTTGTCGA
GGAAGGAGTTCAGGCACCGCCTCTTGCTGTACCTCGTGATCTTGATTCTC
GCCGGCGCGATCGTGCTCGTCGTCTACCTGAAGATTCGACGCCATCTGAA
GTAAGAGTCGCTTGAGTCTGCTGGATTCCCGGCGTGTCCTCGACGAGACC
GAGGGCGTTGGCCGCCGAGTCGTGGGAGACCTCGAGTCACAACGCGAATC
TCTCCTACGGTCGCAGGCGCACGTGAGAGACACGGAAGGCGCCGCGGTGA
AGGCGCGGCGGATGCTTAGGTCCTTGTCGAGGAAGGAGTTCAGGCACCGC
CTCTTGCTGTACCTCGTGATCTTGATTCTCGCCGGCGCGATCGTGCTCGT
CGTCTACCTGAAGATTCGACGCCATCTGAAGTAA
back to top