mRNA_F-serratus_M_contig692.18014.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig692.18014.1 vs. uniprot
Match: D7FTY6_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY6_ECTSI) HSP 1 Score: 429 bits (1104), Expect = 2.140e-134 Identity = 288/626 (46.01%), Postives = 389/626 (62.14%), Query Frame = 1
Query: 751 MESLHRTIETKDDAVQKLTRETGRXXXXXXXXXSQCEETRGQESAMDVAVAQNKQLLKLLEQEESKREDVLRERDEALAEVSELKYRVGTSDTQQAERNAALEVKLIKGVKESAVLTEKYTQAKERAEALEAELEEVKRQAAFEREIYTTELNTRRRGHYELLSQLQGAKDELQQTKDRLETADQDLEMCRQQSAELDRRLVSAQTDLRTVERNSREQEIRASEDARLSETSMSKQVSLTESLEHKVVNMSRTILRLVQRHKDLQAEVARRESEEARLHEQIQTSDKRQLTLQQKVIRLESHLDLEATQKHLHRAIDEFNSHM-KPGVPLANSE-TVTEASSRRVSPQEYRGVGDLLWSRRQVLSRFLAFFKLVSDREESASTVQREAVVQTVGEAVDEAVAARKLDLSECGLEDSDILDLMCVVRSCPLLASLDISMNHVGDQAAASIADAFQHPACGLTMIDLRRNQMTMEGVGELAKGLEKSSRHRGVTHVYVHREGRIDALAK-----------RNSTSGDPEDSGRATGLGSLASFANVVIVDVRDNNPPSEILLQSTLDRPERGGNRRRRRQVKEVKELGFRMHDTKKSDSRSIGIPRIKSTMEIARQRDIRNFMTKVAY 2589
M SLH IETKD+AVQK RE+ R + EE +GQE+AM VA QN +LLKLLEQEE KRE VL ERDEALAEVSELK+RV TSD Q A+R + LEVKLIK + E+ L EKY+ E+ E L ELE ++QA F++E T L+T R+ Y ++S+LQ ++DELQ+ KD+ ET +L +CRQQ+AEL+ RL + Q+DL ++ER S E+E A ED+RL++ + K++SL+ESL +KV +MSRTILRLV+RHKDL+A+V + E+EEARL +QI+ + KR++ QQKV+RL+S L +E T K L+ A+D+FNS M KP +P AN + + + P R GD L RRQ+LS +A F LV+ R++ S A +LDLS+CGL+D D+ +M + SCP L L++SMN++GD AAS+A + +CGL +DL NQM+MEGV LAK LE++ RGV+HVYVH EGRIDAL + RNS + +D+ L F +VVIVD RDN+P + L RG +RQ+ + + KK I R +ARQ +R+FMTKVAY
Sbjct: 1 MGSLHGVIETKDNAVQKHKRESDRLRREIKRLHVEREERQGQENAMIVAATQNSRLLKLLEQEELKRESVLTERDEALAEVSELKHRVRTSDEQHAKRTSGLEVKLIKAIGENLALKEKYSSTDEKIETLTKELESARKQAKFDKETAETALSTLRQSQYRVISELQESRDELQRYKDQAETKGDELAVCRQQNAELEMRLGTLQSDLNSMERTSSEREAAADEDSRLAQARLEKEISLSESLHNKVASMSRTILRLVERHKDLKAQVVKHEAEEARLGDQIEEARKREVRFQQKVVRLKSSLTVETTHKRLYAALDKFNSQMTKPPLPAANGGGNLPHDEALAIGPSTQRIKGDALRCRRQLLSNHMALFGLVAGRDDGTSARH----------------ALNELDLSDCGLDDFDVHGVMELACSCPRLEVLNLSMNYIGDAGAASLATVLRLASCGLRRLDLTCNQMSMEGVRVLAKALEENC-SRGVSHVYVHSEGRIDALGREKEDKCQSVKERNSVPDEEQDA--------LGMFFSVVIVDARDNHPQPAGNPDTALPLARRG-----KRQIGHIAAARGLIGSKKKGSG--IKPERNSHNSLLARQSQVRDFMTKVAY 594
BLAST of mRNA_F-serratus_M_contig692.18014.1 vs. uniprot
Match: A0A835Z915_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z915_9STRA) HSP 1 Score: 161 bits (408), Expect = 3.160e-37 Identity = 179/626 (28.59%), Postives = 272/626 (43.45%), Query Frame = 1
Query: 622 AKDETLHLVKVRDGMINAKNDEVLLLSKQNQFLREGMDAIEAEMESLHRTIETKDDAVQKLTRETGRXXXXXXXXXSQCEETRGQESAMDVAVAQNKQLLKLLEQEESKREDVLRERDEALAEVSELKYRVGTSDTQQAERNAALEVKLIKGVKESAVLTEKYTQAKERAEALEAELEEVKRQAAFEREIYTTELNTRRRGHYELLSQLQGAKDELQQTKDRLETADQDLEMCRQQSAELDRRLVSAQTDLRTVERNSREQEIRASEDARLSETSMSKQVSLTESLEHKVVNMSRTILRLVQRHKDLQAEVARRESEEARLHEQIQTSDKRQLTLQQKVIRLESHLDLEATQKHLHRAIDEFNSHMKPGV-----------PLANSETVTEASSRRVSPQEYRGVGDLLWSRRQVLSRFLAFFKLVSDREESASTVQREAVVQTVGEAVDEAVAARKLD--------------LSECGLEDSDI---LDLMCVVRSCPLLASL--DISMNHVGDQAAASIADAFQHPACGLTMIDLRRNQMTMEGVGELAKGLEKSSRHRGVTHVYVHREGRIDALAKRNS--TSGDPEDSGRATGLGSLA--SFANVVIVDVRDN--NPPSEILL 2391
+K + L L++VRDGM+ AK EV L++ QN LR+ +A EAEM +L T++ K+ A+ + + R ++ E G+E A+ ++ AQ+ +LLKLLEQEE KRE +LRE+D A++EV ELK RV AE+ L+++L K +++ A E + +D E A L + A + +L +A L V +R+ + RA+EDA L++ + E L+ +V + + L+ V +L S +EATQ+ LHRA+D+FN+ M PGV + V+ + + WS+RQ+LS F V +A+ AVV G ++ A+ K++ L CG+ DSDI D + V L L D+S N + D A+ +A + C + +DLR NQ+TMEGV LA+ LE S H G++HVYVH EGRIDAL + T+G AT L S ++ +VDVRDN +P + +L
Sbjct: 35 SKVQLLRLLRVRDGMLEAKQKEVSLVAHQNGLLRDQTNAAEAEMAALQLTLKEKEQALSAERKVSERAGRAVKRLQNEMEHYLGREQAIHMSAAQSTRLLKLLEQEEIKREHLLREKDAAVSEVGELKARVAALTKTHAEQEVDLQLRLAKALRDLAATNEHHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRDGGEDAAALLSALSHKGAAQEAQLAAALAALADVRAAARDAQARAAEDAALADARAESDRAAKEKLQERVRDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTALTQQLRGVVDQLRSAASMEATQRRLHRALDKFNTQMAPGVGGXXXXXXXXXXXXXXXXFVADMAGGVTASAWTALQQQTWSKRQMLSLF------VQHAAATAAASAANAVVPDSGACDADSPASFKMERSGAGGTPSELLIPLGNCGIVDSDIDCVADTLARVAEYTALPPLMVDLSANFITDTGASQLAAVLRLDGCKVKRLDLRYNQVTMEGVRALARALE-SCTHHGISHVYVHAEGRIDALGVQQPQCTTGGSSTDAAATEQQPLGPDSLVSIAVVDVRDNASSPAGQTVL 653
BLAST of mRNA_F-serratus_M_contig692.18014.1 vs. uniprot
Match: A0A485LEN8_9STRA (Aste57867_19820 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEN8_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.310e-10 Identity = 44/141 (31.21%), Postives = 74/141 (52.48%), Query Frame = 1
Query: 1948 AARKLDLSECGLEDSDILDLMCVVRSCPLLASLDISMNHVGDQAAASIADAFQHPACGLTMIDLRRNQMTMEGVGELAKGLEKSSRHRGVTHVYVHREGRIDALAKRNSTSGDPEDSGRATGLGSLASFANVVIVDVRDNN 2370
A L L E G+ D ++ + ++R+ + L + N V + A +IA CGLT IDLR+NQ+ +G+ L + LE++ R + HVYVH G+I+AL + S +P+ ++ V ++DVR+N+
Sbjct: 687 AKLSLKLPESGIGDEEVHAIAALLRNNSSIHELQLHGNAVTSEGARAIAAILGSATCGLTFIDLRKNQIGDDGIRVLTEALERNPR---IRHVYVHAGGKIEALGANKAASSNPD---------AIVQVETVCVIDVRENH 815
BLAST of mRNA_F-serratus_M_contig692.18014.1 vs. uniprot
Match: A0A7S1TRW1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRW1_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 8.980e-10 Identity = 53/163 (32.52%), Postives = 79/163 (48.47%), Query Frame = 1
Query: 1975 CGLEDSDILDLMCVVRSCPLLASLDISMNHVGDQAAASIADAFQHPACGLTMIDLRRNQMTMEGVGELAKGLEKSSRHRGVTHVYVHREGRIDALAKRNSTSGDPEDSG--RATGLGSLASFAN------------VVIVDVRDNNPPSEILLQSTLDRPERG 2421
CGL ++ + VR+ P + SLD+ N D A + + CGL ++DLR+N +TM+GV +A +E R V +VYVH+ G++D + + + DPE + RA ASF V+ VD RDN P STL+R +G
Sbjct: 1 CGLTTDELGTVCEAVRASPTIRSLDLRSNAFTDAHAVTFCNMLHRSECGLRLLDLRKNHLTMDGVQSIAAAVEIM---RPVEYVYVHKNGQVDGMGIVDVS--DPEATALIRAGASKPDASFFKSPSSRRNASVLAVIRVDARDNGP-------STLERQLQG 151
BLAST of mRNA_F-serratus_M_contig692.18014.1 vs. uniprot
Match: A0A6G0W4V5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W4V5_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 7.130e-9 Identity = 133/603 (22.06%), Postives = 257/603 (42.62%), Query Frame = 1
Query: 643 LVKVRDGMINAKNDEVLLLSKQNQFLREGMDAIEAEMESLHRTIETKDDAVQKLTRETGRXXXXXXXXXSQCEETRGQESAMDVAVAQNKQLLKLLEQEESKREDVLRERDEALAE----VSELKYRVGTSDTQQAERNAALEVKLIKGVKESAVLTEKYTQAKERAEALEAELEEVKRQAAFEREIYTTELNTRRRGHYELLSQLQGAKDELQQTKDRLETADQDLEMCRQQSAELDRRLVSAQTDLRTVERNSREQEIRASEDARLSETSMSKQVSLTESLEHKVVNMSRTILRLVQRHKDLQAEVARRESEEARLHEQIQTSDKRQLTLQQKVIRLESHLDLEATQKHLHRAIDEFNSHMKPGVPLANSETVTEASSRRVSPQEYRGVGDLLWSRRQVLSRFLAFFKLVSDREESASTVQREAVVQTVGEAVDEAVAAR--------KLDLSECGLEDSDILDLMCVVRSCP-LLASLDISMNHVGDQAAASIADAFQHPACGLTMIDLRRNQMTMEGVGELAKGLEKSSRHRGVTHVYVHREGRIDALAKRNSTSGDPEDSGRATGLGSLASFANVVIVDVRDNNPPSEILLQSTLDRP 2412
L+ +RD + AK+ E+ L++ N LR +DA EAEME+L RT+ +KD + + + + + + GQE AM+++ QN QLL+ L+ EE+K E LR + +AL + V+E K ++ SD E + L+ K ++ ++S L + + RR YEL +L + L ++ R E +++L+ +++ +L+R + A + +E A E ++ + Q+ T E K ++ R L+ ++ K+++ V ++ E + E+ + + L++K+ LE+ +H + E N+ K V + T+ + Q +L+ A K + + +E+ ++ + E ++ R K LS C L D+D+ L+ V+ L LD N + DQ + + ++M++L+ N ++ +GV +LA GLE+ V VH EGR++A +++G++ ++ VD+ DN S ++ + + +P
Sbjct: 203 LISLRDDALQAKSKELSLVTTANDTLRAQLDAFEAEMENLQRTLTSKDMELYRSAKRIDKLERHVEKLEAAVKRADGQELAMELSTKQNTQLLQCLQAEEAKNE-ALRAKVDALTQDLVHVNEQKSQI-RSDAAVVEIDVELKTKSLE--RQSQTLATSLEKLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSKQYELTLKLHETESLLHSSQSRKEILEEELQATQERMKDLERLYMEA--------KRWKEDMSSAFEGLKIEHS----QLQRTHKTEAKKFDVERASLQ--EQLKEMERFVKAQKMEMEQREEKKKLAXXXXXKLEKKIQELET---------RIHGLVAEANNETKRRVGVEMELTIAHGQLSQFQAQS-----------NDMLAGLYAKHKKLQEAKEAVQQQLQQLEYEYKREQQGKSQLLRHCYQDSQPKGTLSSCWLSDADLPILVRFVQGLDRALEKLDFGSNRITDQGVKYLLQILKPMM--VSMVNLQENYISPQGVRQLAAGLEEFG-----CIVNVH-EGRVEAT----------DEAGKS-----------ILTVDISDNKDASSLVYKPQMPKP 738 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig692.18014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig692.18014.1 >prot_F-serratus_M_contig692.18014.1 ID=prot_F-serratus_M_contig692.18014.1|Name=mRNA_F-serratus_M_contig692.18014.1|organism=Fucus serratus male|type=polypeptide|length=859bp MTMPRVYQPRCKKQPKQQPRVDDDRLGGVNDKTDEWMTCDTARREETSRHback to top mRNA from alignment at F-serratus_M_contig692:80231..168559+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig692.18014.1 ID=mRNA_F-serratus_M_contig692.18014.1|Name=mRNA_F-serratus_M_contig692.18014.1|organism=Fucus serratus male|type=mRNA|length=88329bp|location=Sequence derived from alignment at F-serratus_M_contig692:80231..168559+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig692:80231..168559+ >mRNA_F-serratus_M_contig692.18014.1 ID=mRNA_F-serratus_M_contig692.18014.1|Name=mRNA_F-serratus_M_contig692.18014.1|organism=Fucus serratus male|type=CDS|length=5154bp|location=Sequence derived from alignment at F-serratus_M_contig692:80231..168559+ (Fucus serratus male)back to top |