mRNA_F-serratus_M_contig688.17938.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig688.17938.1 vs. uniprot
Match: D8LGY8_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY8_ECTSI) HSP 1 Score: 261 bits (667), Expect = 6.370e-68 Identity = 210/391 (53.71%), Postives = 240/391 (61.38%), Query Frame = 2
Query: 5 VKAELETFRERELSALRLQMNATQRRELDATRKELQTQYDARVERLQEAEAGRXXXXXXXXXXXXXXXXXXXXXXXXXLDLVRAREQEVRRGAELDARAIRAEELRLRDLAAALEARAEEVRRHERDGARGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-----------------------------------AEANANRAAEQAAVYREAYEMHREVAVEGDHAYVRLGRAELEGALRSAEAALEKSRGRHAEALRHAVGERDALKTEVERLREREGLWEEEATELRQTLMSAEMEREGAERRADEEECERTALDGQVEELRVALRRSRDAIEAIRLCDVEAE 1072
+KAE ++FRER+L+ALR+QM +T+RRE+DA RKELQ+QYDARVERLQE E R XXXXXXXXXXXXXXXXXXXXXXXX+DL+R REQEVRR AELD+R +RAEELRLRDLA +LEARAEEVRR ER+GARGR AEA A RAAEQAAVY+EAY+M REV VEGD A+VRLGR ELEG +RS EA++E+ R R A++LR A ERDALK E RLRERE WE Q L SAE++R+ AE RA+EEECER+ALDGQVEELR ALRRSRDAIEAIRLCDVEAE
Sbjct: 354 IKAERDSFRERDLAALRVQMASTRRREVDAMRKELQSQYDARVERLQETERDREXXXXXXXXXXXXXXXXXXXXXXXXMDLLRTREQEVRRSAELDSRGVRAEELRLRDLAVSLEARAEEVRRREREGARGREDALQAARHEARQSLEVKEEGVARERCGVVGRGWEKRGEGGGGGGTGFPGGIAVLDHQRSEEFLKKEMEAVRAERKACQEQLSQHAETSRALQXXXXXXXXXXXRATAAEAEAERAAEQAAVYKEAYQMRREVTVEGDRAFVRLGRQELEGRVRSLEASMEEERARQAKSLRKATEERDALKAEATRLRERERQWEAXXXXXXQALSSAELDRDRAEHRAEEEECERSALDGQVEELRAALRRSRDAIEAIRLCDVEAE 744
BLAST of mRNA_F-serratus_M_contig688.17938.1 vs. uniprot
Match: A0A6H5KLA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA2_9PHAE) HSP 1 Score: 114 bits (285), Expect = 5.310e-22 Identity = 66/100 (66.00%), Postives = 77/100 (77.00%), Query Frame = 2
Query: 773 LEKSRGRHAEALRHAVGERDALKTEVERLREREGLWEEEATELRQTLMSAEMEREGAERRADEEECERTALDGQVEELRVALRRSRDAIEAIRLCDVEAE 1072
+E+ + R A++LR ERDALK E RLRERE WE RQ L SAE++R+ AE RA+EEECER+ALDGQV+ELR ALRRSRDAIEAIRLCDVEAE
Sbjct: 1 MEEEKARQAKSLRKVTEERDALKAEATRLRERERQWEXXXXXXRQALSSAELDRDRAEHRAEEEECERSALDGQVQELRAALRRSRDAIEAIRLCDVEAE 100 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig688.17938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig688.17938.1 >prot_F-serratus_M_contig688.17938.1 ID=prot_F-serratus_M_contig688.17938.1|Name=mRNA_F-serratus_M_contig688.17938.1|organism=Fucus serratus male|type=polypeptide|length=1076bp MNATQRRELDATRKELQTQYDARVERLQEAEAGRERRNAERLRDAEMAQFback to top mRNA from alignment at F-serratus_M_contig688:254627..263700- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig688.17938.1 ID=mRNA_F-serratus_M_contig688.17938.1|Name=mRNA_F-serratus_M_contig688.17938.1|organism=Fucus serratus male|type=mRNA|length=9074bp|location=Sequence derived from alignment at F-serratus_M_contig688:254627..263700- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig688:254627..263700- >mRNA_F-serratus_M_contig688.17938.1 ID=mRNA_F-serratus_M_contig688.17938.1|Name=mRNA_F-serratus_M_contig688.17938.1|organism=Fucus serratus male|type=CDS|length=6456bp|location=Sequence derived from alignment at F-serratus_M_contig688:254627..263700- (Fucus serratus male)back to top |