mRNA_F-serratus_M_contig684.17888.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig684.17888.1 vs. uniprot
Match: A0A6H5L384_9PHAE (Cytochrome b561 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L384_9PHAE) HSP 1 Score: 218 bits (556), Expect = 1.960e-65 Identity = 111/198 (56.06%), Postives = 138/198 (69.70%), Query Frame = 1
Query: 82 MIGSVATVVGFIIVTIVSLEALFVSPGRQHLFAWHPFLMSMGALGLSTAGIQAIRSRWGTKGIQSKTRRVQLHSVLSNGGLLCMLGGQYAIYTNKERMGKPHFTSWHAYFGLLTFALWAANVAVAGTNSADFSNKRLVFLWRSRNKRWLGAATYTLGLVAVSLGLHSAWGVGSFG-VRGAWAMTSSIGAIYFCVISQG 672
MIG + TV+G + +SLE + LFAWHPFLMS+GALGL TAGIQA+RSR G+ KT+RVQLHS LSN L MLGG YAIYTNKE+MGK H+TSWH++ G+L ALW N AVAG N+AD +RLVFLW+SRN RW G A + GL AV LGLHS WG+ S G RGAW +T+ + ++ +++ G
Sbjct: 1 MIGMMTTVLGLGLALFISLEGY----NQGGLFAWHPFLMSVGALGLPTAGIQAVRSRHAVGGMGPKTQRVQLHSALSNLALASMLGGLYAIYTNKEKMGKNHWTSWHSWAGVLALALWVGNFAVAGANTADLEKRRLVFLWKSRNHRWAGKAAFCAGLGAVVLGLHSGWGLRSLGGERGAWTLTAGVLGVFVGIVASG 194
BLAST of mRNA_F-serratus_M_contig684.17888.1 vs. uniprot
Match: A0A061QZV1_9CHLO (Cytochrome b-561-like protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QZV1_9CHLO) HSP 1 Score: 75.9 bits (185), Expect = 4.340e-12 Identity = 54/157 (34.39%), Postives = 81/157 (51.59%), Query Frame = 1
Query: 133 SLEALFVSPGRQHLFAWHPFLMSMGALGLSTAGI-QAIRSRWGTKGIQSKTRRVQLHSVLSNGGLLCMLGGQYAIYTNKERMGKPHFTSWHAYFGLLTFALWAANVAVAGTNSADFSNKRLVFLWRSR-------NKRWLGAATYTLGLVAVSLGLH 579
+L A F +P ++F+WHP M +G + + T GI +AI R+ K + + ++ H + L+ +L G ++IY NKER GKPH TS HA G T A+ + + F L+ + R + R LGAAT+TL L A+ LGL
Sbjct: 23 TLAAWFFAP--SNIFSWHPTCMGIGFILVMTEGILRAIEFRFLEKA--DRVQAIRTHGYIQLLALIFILLGFFSIYLNKERQGKPHVTSTHAKVGAATGAVGLLALMAGAVSFRSFG---LLSAFPERMHGRIKASHRMLGAATWTLSLAAIELGLQ 172
BLAST of mRNA_F-serratus_M_contig684.17888.1 vs. uniprot
Match: A0A061RAS3_9CHLO (Cytochrome b-561-like protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RAS3_9CHLO) HSP 1 Score: 76.3 bits (186), Expect = 5.700e-12 Identity = 62/181 (34.25%), Postives = 89/181 (49.17%), Query Frame = 1
Query: 133 SLEALFVSPGRQHLFAWHPFLMSMGALGLSTAGI-QAIRSRWGTKGIQSKTRRVQLHSVLSNGGLLCMLGGQYAIYTNKERMGKPHFTSWHAYFGLLTFALWAANVAVAGTNSADFSNKRLVFLWRSR-------NKRWLGAATYTLGLVAVSLGL-HSAWGVGSFGVR--GAWAMTSSIG 642
+L A F +P ++F+WHP M +G + + T GI +AI R+ K + + ++ H + L+ +L G ++IY NKER GKPH TS HA G T A+ + + F L+ + R + R LGAAT+TL L A+ LGL H A G G AW S G
Sbjct: 23 TLAAWFFAP--SNIFSWHPTCMGIGFILVMTEGILRAIEFRFLEKA--DRVQAIRTHGYIQLLALIFILLGFFSIYLNKERQGKPHVTSTHAKVGAATGAVGLLALMAGAVSFRSFG---LLSAFPERMHGRIKASHRMLGAATWTLSLAAIELGLQHPAADKGGSGSSWWAAWQAWCSCG 196
BLAST of mRNA_F-serratus_M_contig684.17888.1 vs. uniprot
Match: UPI00065BA430 (cytochrome b561 domain-containing protein 2 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BA430) HSP 1 Score: 74.7 bits (182), Expect = 1.360e-11 Identity = 50/156 (32.05%), Postives = 67/156 (42.95%), Query Frame = 1
Query: 157 PGRQHLFAWHPFLMSMGALGLSTAGIQAIRSRWGTKGIQSKTRRVQLHSVLSNGGLLCMLGGQYAIYTNKERMGKPHFTSWHAYFGLLTFALWAANVA----------VAGTNSADFSNKRLVFLWRSRNKRWLGAATYTLGLVAVSLGLHSAWGV 594
PG LF+WHP LM++G + L GI S+ +V +HS + G+ C G AIY NK+R GK HFT+WH G++T A A V G ++ +L G YTL + LGL S W V
Sbjct: 37 PGSS-LFSWHPTLMAIGFVLLMFEGIVVFSKSSSLYPTASRPSKVTVHSYVIGVGVTCAFAGVAAIYVNKDRAGKDHFTTWHGLIGIITMAYCCAQSCGGALAKYYKYVGGFIKVKLADLKLYHATS-------GLFAYTLVTASFVLGLQSNWAV 184
BLAST of mRNA_F-serratus_M_contig684.17888.1 vs. uniprot
Match: A0A830HE37_9CHLO (Cytochrome b561 domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HE37_9CHLO) HSP 1 Score: 70.5 bits (171), Expect = 2.980e-10 Identity = 52/144 (36.11%), Postives = 73/144 (50.69%), Query Frame = 1
Query: 175 FAWHPFLMSMGALGLSTAG-IQAIRSRWGTKGIQSKTRRVQLHSVLSNGGLLCMLGGQYAIYTNKERMGKPHFTSWHAYFGLLTFALWAANVAVAGTNSADFSNKRLVFLWRSRNKRW---------LGAATYTLGLVAVSLGL 576
F +HP M++ L G + AI+ R +G + +T + H+ L + G+L + G YAIYTNK GKPHFTS+H+Y GLL F L A+ S KRL L R + W +G T +GL+A+ L L
Sbjct: 34 FGYHPSCMALAYLLFMAEGALTAIKFR-SLEGPE-RTTAIWKHASLQSLGVLFAIIGFYAIYTNKSIHGKPHFTSYHSYAGLLAFVL-----AIVAPLGGAVSFKRLGLLTRLPQQHWAPIKYVHRKVGQVTVFVGLLAIVLAL 170
BLAST of mRNA_F-serratus_M_contig684.17888.1 vs. uniprot
Match: A0A485KMY0_9STRA (Aste57867_9460 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KMY0_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.510e-10 Identity = 43/167 (25.75%), Postives = 80/167 (47.90%), Query Frame = 1
Query: 172 LFAWHPFLMSMGALGLSTAGIQAIRSRWGTKGIQSKTRRVQLHSVLSNGGLLCMLGGQYAIYTNKERMGKPHFTSWHAYFGLLTFALWAANVAVAGTNSADFSNKRLVFLWRSRNKRWLGAATYTLGLVAVSLGLHSA-WGVGSFGVRGAWAMTSSIGAIYFCVISQ 669
LF+WHP +++ L + + + A+ R G + VQ H ++ ++ M G AIY NKE+ +PHFTS H++ G + N + ++ + W+ R+ G + VAV+ G +S WG + G +G A +++I ++ V+++
Sbjct: 29 LFSWHPITLALAYLLATPSALIAMSDRRGETNHGKRIALVQWHVLMQILTVILMTIGFGAIYVNKEKNNRPHFTSIHSWIGCTALGFYYMNFFFGMFKTYG---GKVNWQWKDTAHRYSGTLAFLTSGVAVAYGFYSGGWGRANLGQQGQLAASAAIALLHVAVVAK 192
BLAST of mRNA_F-serratus_M_contig684.17888.1 vs. uniprot
Match: A0A7S1SKX3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SKX3_9CHLO) HSP 1 Score: 69.3 bits (168), Expect = 4.900e-10 Identity = 56/157 (35.67%), Postives = 75/157 (47.77%), Query Frame = 1
Query: 130 VSLEALFVSPGRQHLFAWHPFLMSMGALGLSTAGI-QAIRSRWGTKGIQSKTRRVQLHSVLSNGGLLCMLGGQYAIYTNKERMGKPHFTSWHAYFGLLTFALWAANVAVAGTNSADFSNKRLVFLWRSRNK-------RWLGAATYTLGLVAVSLGL 576
+S A F P LF+WHP M+ G L L T G+ +A R K + +Q H + LL ++ G AIY NKER+ KPH TS+H+ FGL T L A A+ G S F L+ + R GA T+ L LV + LG+
Sbjct: 26 ISFVAAFFRPSV--LFSWHPACMATGYLLLMTEGLLRAAEFRPLEK--LPRVHAIQRHGWVQGAALLLLIMGYAAIYLNKERLDKPHLTSYHSKFGLAT-TLLALGSAMGGLLS--FRKLGLISFFPDHMHASIKAAHRAAGALTWVLSLVTIELGM 175
BLAST of mRNA_F-serratus_M_contig684.17888.1 vs. uniprot
Match: A0A8B7Z6C4_ACAPL (Ascorbate ferrireductase (transmembrane) n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z6C4_ACAPL) HSP 1 Score: 69.3 bits (168), Expect = 1.080e-9 Identity = 51/169 (30.18%), Postives = 76/169 (44.97%), Query Frame = 1
Query: 172 LFAWHPFLMSMGALGLSTAGIQAIRSRWGTKGIQSKTRRVQLHSVLSNGGLLCMLGGQYAIYTNKERMGKPHFTSWHAYFGLLTFALWAANVAVAGTN------SADFSNKRLVFLWRSRNKRWLGAATYTLGLVAVSLGLHSAWGVGSFGVRGAWAMTSSIGAIYFCV 660
LF+WHP LMS+ L T I ++ +V H + + +LC L G I NKER GKPHFTSWH G+ T ++ A AG+ +A + + L+ + + G +TL ++LGL + W W+ T+ A YFC+
Sbjct: 57 LFSWHPVLMSIAFALLMTEAILFFSPDSNLVPKATRKMKVTYHWITNTTAVLCALAGLAIIVVNKERYGKPHFTSWHGLCGICT-VVYTCLQATAGSTLLYPKLTAGLAKPADLKLYHATS----GLVLFTLACTTLTLGLFTNW---------FWS-TAHGTAWYFCI 210
BLAST of mRNA_F-serratus_M_contig684.17888.1 vs. uniprot
Match: A8J1Z7_CHLRE (Cytochrome b-561-like protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A8J1Z7_CHLRE) HSP 1 Score: 68.6 bits (166), Expect = 1.870e-9 Identity = 68/215 (31.63%), Postives = 93/215 (43.26%), Query Frame = 1
Query: 121 VTIVSLEALFVSPGRQHLFAWHPFLMSMGALGLSTAGIQAIRSRWGTKGIQSKTRRVQLHSVLSNGGLLCMLGGQYAIYTNKERMGKPHFTSWHAYFGLLTFALWAANVAVAGTNSADFSNKRLVFL----WRSRNK---RWLGAATYTLGLVAVSLGL-HSAWGVGSFGVRGAWAMTSSIGAIYFCVISQGLGVIPVAEKKDVR*GGSRFRRTV 741
V +V+L FV LFAWHP MS+G + T G+ A G + + + H++L L+C+L G IY NK +GKPHF S HA FGL T L +V + F ++ W+ R K R LG T+ L LV + L L H A G + AW G V+ GL + V K + +TV
Sbjct: 33 VALVALSIAFVLFDNS-LFAWHPAFMSIGYIVFMTEGLIAAIHFRHIDG-PDRVKAIWSHALLQIRALVCVLIGFGVIYRNKILLGKPHFMSLHAKFGLATLIL---SVLMPLWGLVSFRRMGIIQKFPERWQPRIKALHRQLGLLTWLLALVTIELALPHPAVAKGR--LTQAW----QAGVALIGVLLLGLSLKAVVTPKSLGGAEDPLSKTV 236
BLAST of mRNA_F-serratus_M_contig684.17888.1 vs. uniprot
Match: A0A7S2F9S8_9CHLO (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2F9S8_9CHLO) HSP 1 Score: 66.6 bits (161), Expect = 2.590e-9 Identity = 42/109 (38.53%), Postives = 56/109 (51.38%), Query Frame = 1
Query: 277 KTRRVQLHSVLSNGGLLCMLGGQYAIYTNKERMGKPHFTSWHAYFGLLTFALWAANVAVAGTNSADFSNKRLVFLWRSRNKRW---------LGAATYTLGLVAVSLGL 576
+T + H+ L + G+L + G YAIYTNK GKPHFTS+H+Y GLL F L A+ S KRL L R + W +G T +GL+A+ L L
Sbjct: 15 RTTAIWKHASLQSLGVLFAIIGFYAIYTNKSIHGKPHFTSYHSYAGLLAFVL-----AIVAPLGGAVSFKRLGLLTRLPQQHWAPIKYVHRKVGQVTVFVGLLAIVLAL 118 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig684.17888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig684.17888.1 >prot_F-serratus_M_contig684.17888.1 ID=prot_F-serratus_M_contig684.17888.1|Name=mRNA_F-serratus_M_contig684.17888.1|organism=Fucus serratus male|type=polypeptide|length=211bp MIGSVATVVGFIIVTIVSLEALFVSPGRQHLFAWHPFLMSMGALGLSTAGback to top mRNA from alignment at F-serratus_M_contig684:40240..45633+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig684.17888.1 ID=mRNA_F-serratus_M_contig684.17888.1|Name=mRNA_F-serratus_M_contig684.17888.1|organism=Fucus serratus male|type=mRNA|length=5394bp|location=Sequence derived from alignment at F-serratus_M_contig684:40240..45633+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig684:40240..45633+ >mRNA_F-serratus_M_contig684.17888.1 ID=mRNA_F-serratus_M_contig684.17888.1|Name=mRNA_F-serratus_M_contig684.17888.1|organism=Fucus serratus male|type=CDS|length=1266bp|location=Sequence derived from alignment at F-serratus_M_contig684:40240..45633+ (Fucus serratus male)back to top |