mRNA_F-serratus_M_contig67.17711.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig67.17711.1 vs. uniprot
Match: D7G5E7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E7_ECTSI) HSP 1 Score: 311 bits (797), Expect = 1.150e-84 Identity = 376/946 (39.75%), Postives = 439/946 (46.41%), Query Frame = 3
Query: 1497 AFSLGAESIEEFFGLEKKPRMISTTAPLSSPPSSVGEDPSGMPKLDKATVDSMLEENGLNEVTLKENFRKMEAEARVKA-------------------------------AQVSDESTKEASEIPATPETSETMEPPATPFVNPFGFLATIFSPEPAPTTKKDASFADASEQAP-EADSRKAAETARPRVSAPTTPVVPEKEKKKEVKAQVSDESPKGASEIPVTPETSETMEPSATPSVNPFGFIANIFSPSPAPTTKKDPALADASEKVPEVASGKTSEVTRPRVSATTSPVVPQKEKEKEPEEQAAAGWGGLRDIFGDMFAEPVYDDEIDTLPKETSSAPRAMPVFAPPPAXXXXXXXXXXXXXSKTNAKEKAAPAKSEAPTPLSFLDGMFGGGN-----------KVAPPSPAPAXARXXXXXXXXXXXXXAAEQKSS-------------------------------------ATSLFDGLFGSGDKKEEKPSSRPKPVKSPSSPAASASVKKTAVVSKTKPAASPRAKSQGSPSGTPAASLFGMFGDGKSEENVEVAVKPXXXXXXXXXXXXXXXAVPKAPAFNLFGTAPKAPAGKGKDTPAAPPASSKTVGPSTKXXXXXXXXXXXXMFDFLGGVAKTTAKSAPPXXXXXXXXXVVPKPSGGANPFAGLFGSAGGXXXXXXXXXXXXXEPKXXXXXXXXXXXXXXXXXXXMVSRVKTMDDAFLRKVSLMLKRNQTKIKKFQQLTDRFRGGLITASVYYDGVEGLFGEENVEEIIDPLLAALPENDKRRALQQVYNKAQKARGVSLGSASQQDAGGLAGLFGGWGA-SKSESPR----APSGLKKKEEALAPRGTGKGGGAADDPYAFAAAKLKDADYQLFVARTKLFTKGGINARNYYDTLAKLFGKEGVPKQLPAVLKTLPQNKRKILQDVCNGLNK 4079
AFSLGAES+EEFFGL KKPR++STT P S P P+ M +LD V++M+ +NGLNEVTLKENFRKMEAEA A VS E K+ + A + + P + F F F PE P A+ A +A + ET P+ APTT A P G + +F + S KT+ RP+ A P + EE+ GGL + MF PVYDDE+DT+PK+T +APRAMPVFAPP XXXXXXXXXX SK K +A P SFLDG+FG KVAPP P P X XXXXXXXXXXXXX A S+F G+ G G KK E A K XXXXXXXXXXX VPKA + PA+ XXXXXXX MFDFLGG T K APP XXXXXX GLFG XXX XXXXXXXXXXXXXXXXXX +VSRVKTMDD+FL+KVS+ML+RNQ+KIKKFQQLTDRFRGGLI A VYY GVE LFGE+NVEEII PLLAALPENDKR+ LQ VY+KAQ+A+ + D GG+A LFGGWG SK+++ AP+ KK A DPYAFAAAK+ DY+LF RT L+ +GGINARNYYDTLA +FG +GV QLPA+LK LPQNKRK+LQDV +GL+K
Sbjct: 230 AFSLGAESLEEFFGLTKKPRLVSTTTPPSDEP-----QPAPMAELDPTAVEAMITDNGLNEVTLKENFRKMEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDANVSAEEAKKIAAAAAKDAVALSPNPIVDLLSSAFNFDK--FDPEDRPGPPMAGRKAEELRAAALDAVKEEMKETTSPKAKAPTT----------------------------------------AKPEGGLGGLLGGMFG-------------------TDQQGSDKTAAAPRPK--AVAPPKAXXXXPKAVAEEEEGEKEGGLAGVLSGMFGAPVYDDEVDTIPKKTPAAPRAMPVFAPP---XXXXXXXXXXPPSK----------KKDAAAPSSFLDGLFGXXXXXXXXXXXXKAKVAPP-PTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPSMFGGMLGGGGKKAEAXXX-----------------------------------------------XXXXXXXXXXXXXXXXAFKMFGMGXXXXXXXXXXXXVPKAKS----------------------PAAXXXXXXXXXXXXXXXXSSGGGMFDFLGGGVATKKKVAPPAPAXXXXXXXXXXXX-----XXGLFGGG------------XXXXXXXXXXXXXXXXXXXXXXXXPIVSRVKTMDDSFLKKVSVMLRRNQSKIKKFQQLTDRFRGGLIKAPVYYAGVEELFGEDNVEEIIGPLLAALPENDKRKTLQAVYSKAQRAKNGE----GESDGGGIASLFGGWGGKSKADTAAKPAAAPAPAKKGXXXXXXXXXXXXXXXAADPYAFAAAKISGKDYELFKTRTTLYARGGINARNYYDTLATVFGAKGVSAQLPALLKALPQNKRKLLQDVVDGLSK 1003
BLAST of mRNA_F-serratus_M_contig67.17711.1 vs. uniprot
Match: A0A6H5L7G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7G1_9PHAE) HSP 1 Score: 275 bits (702), Expect = 6.020e-72 Identity = 366/893 (40.99%), Postives = 428/893 (47.93%), Query Frame = 3
Query: 1497 AFSLGAESIEEFFGLEKKPRMISTTAPLSSPPSSVGEDPSGMPKLDKATVDSMLEENGLNEVTLKENFRKMEAEARVKAAQVSDESTKEASEIPA-TPETSETMEPPATPFVNPFGFLATIFSPEPAPTTKKDASFADASEQAPEADSRKAAETARPRVSAPTTPVV-------------PEKEKKKEVKAQVSDESPKGASEIPVTPETSETMEPSATPSVNPFGFIANIFSP-------SPAPTTKKDPA----LADASEKVPEVASGKTSEVTRPRVSATTSPVVPQKEKEKEPE---EQAAAGWGGLRDIFGDMFAEPVYDDEIDTLPKETSSAPRAMPVFAPPPAXXXXXXXXXXXXXSKTNAKEKAAPAKSEAPTPLSFLDGMFGGGN-----------KVAPPSPAPAXARXXXXXXXXXXXXXAAEQKSSATSLFDGLFGSG-DKKEEKPSSRPKPVKSPSSP---------------------------AASASVKKTAVVSKTKPAASPRAKSQGSPSGTPAASLFG--MFGDGKSEENVEVAVKPXXXXXXXXXXXXXXXAVPKAPAFNLFGTAPKAPAGKGKDTP---AAPPASSKTVGPSTKXXXXXXXXXXXXMFDFLGGVAKTTAKSAPPXXXXXXXXXVVPKPSGGANPFAGLFGSAGGXXXXXXXXXXXXXEPKXXXXXXXXXXXXXXXXXXXMVSRVKTMDDAFLRKVSLMLKRNQTKIKKFQQLTDRFRGGLITASVYYDGVEGLFGEENVEEIIDPLLAALPENDKRRALQQVYNKAQKAR---GVSLGSASQQDAGGLAGLFGGWGASKSESPRAPSGLKKKEEALAPRGTGKGGGAADDPYAFAAAKLKDADYQLFVARTKLFTKGGINAR 3950
AFSLGAES+EEFFGL KKPR++STT P S P +P+ M +LD V++M+++NGLNEVTLKENFRKMEAEA KAAQ S S PA TP + E G AT A+ D A EA + AA A+ V+ P+V PE + + + ++E + A+ V E ET P A + PT K L + S KT+ RP+V V P K K P+ E+ GGL + MF PVYDDE+DT+PK+TS+APRAMPVFAPPP XXXXXXXXX SK K +A P SFLDG+FGG KV P +PA XXXXXXXXXXXXX S DGLFG G +KK K SP + S + K A K PA P +FG + G GK E XXXXXXXXXXX AF +FG APA K P A PA+ XXXX MFDFLGG A T + APP XXXXXXX +NPF+GLFG +G XXXXXXXXXXXXXXX +VSRVKTMDD+FLRKVS+ML+RNQ+KIKKFQQLTDRFRGGLI A VYY GVE LFGE+NVEEII PLLAALPENDKR+ LQ VY+KAQ+A+ G S KK G DPYAFAAAKL DY+LF ART L+ +GGINAR
Sbjct: 282 AFSLGAESLEEFFGLTKKPRLVSTTTPPSDEP-----EPAPMAELDPTAVEAMIKDNGLNEVTLKENFRKMEAEA--KAAQAS-------SSTPAKTPPSKE-------------GAKATAA-----------AAAGDGKVSAEEAK-KIAAAAAKDAVALSPNPIVDLLSSAFNFDKFDPEDKPGPPMAGRKAEEL-RAAALNAVKEEKEETTSPKAAXXXXXXXXXXXXXXXXXXXXXXAKTPTKAKPEGGLGGLLGGMFGTDQQGSDKTAAAPRPKV------VAPPKAKAAAPKAVAEEEGEKEGGLAGVLSGMFGAPVYDDEVDTIPKKTSAAPRAMPVFAPPPXXXXXXXXXXP---SK----------KKDAAAPSSFLDGLFGGXXXXXXXXXXPKAKVTPXXXSPAPXXXXXXXXXXXXXXXXXXXXXX--SFLDGLFGGGGEKKTXXXXXXXKXXXXXXSPXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSPAAKAPAATKKAAPA--PXXXXXXXXXXXXXXXMFGGMLGGSGKKEAXXXXXXXXXXXXXXXXXXX----------AFKMFGMGGGAPAEAKKAAPVPKAKSPAAKXXXXXXXXXXXXSPASSGGGMFDFLGGGAATKKEVAPPPAXXXXXXXXX------SNPFSGLFGGSG------------VSGTSAKKXXXXXXXXXXXXXXXPIVSRVKTMDDSFLRKVSVMLRRNQSKIKKFQQLTDRFRGGLIKAPVYYAGVEELFGEDNVEEIIGPLLAALPENDKRKTLQAVYSKAQRAKNGEGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKGSMKKPAAGGKXXXXXXXDPYAFAAAKLSGKDYELFKARTTLYVRGGINAR 1083
BLAST of mRNA_F-serratus_M_contig67.17711.1 vs. uniprot
Match: A0A835YR94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR94_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.880e-36 Identity = 101/229 (44.10%), Postives = 127/229 (55.46%), Query Frame = 3
Query: 3426 KTMDDAFLRKVSLMLKRNQTKIKKFQQLTDRFRGGLITASVYYDGVEGLFGEENVEEIIDPLLAALPENDKRRALQQVYNKAQKARGVSLGSASQQDAGGLAG---------LFGGWGASKSESPRAPSGLKKKEEALAPRGTGKGGGAADDPYAFAAAKLKDADYQLFVARTKLFTKGGINARNYYDTLAKLFGK--EGVPKQLPAVLKTLPQNKRKILQDVCNGLNK 4079
K MDDAF++ VS +L+R+Q+KIK+FQ +TDRFRGGL+ A YY VE LFG NV +++ PLLA+LPE DKRRAL+ KA A+ LFG + K A DP+AFA KL A+Y LFVARTKLF +GGINARNYYDTL LFGK GV + V+ LP +K ++++DV GLNK
Sbjct: 860 KKMDDAFIKTVSTLLRRDQSKIKQFQTVTDRFRGGLMAAPAYYTAVETLFGPANVSKVLQPLLASLPEQDKRRALEDAVKKADAAKAXXXXXXXXXXXXXXXXXXXXXXXXXLFGFXXXXXXXXXXXAGAVAK----------------AADPFAFAQGKLSAANYDLFVARTKLFARGGINARNYYDTLETLFGKGPRGVGATIGNVVNALPASKARLVEDVYKGLNK 1072 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig67.17711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig67.17711.1 >prot_F-serratus_M_contig67.17711.1 ID=prot_F-serratus_M_contig67.17711.1|Name=mRNA_F-serratus_M_contig67.17711.1|organism=Fucus serratus male|type=polypeptide|length=1313bp MRLQAVLLLLSLDLASAFQLTLRARFRAPSSLRHTSPAFPVQGYCKPDGAback to top mRNA from alignment at F-serratus_M_contig67:139133..150513+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig67.17711.1 ID=mRNA_F-serratus_M_contig67.17711.1|Name=mRNA_F-serratus_M_contig67.17711.1|organism=Fucus serratus male|type=mRNA|length=11381bp|location=Sequence derived from alignment at F-serratus_M_contig67:139133..150513+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig67:139133..150513+ >mRNA_F-serratus_M_contig67.17711.1 ID=mRNA_F-serratus_M_contig67.17711.1|Name=mRNA_F-serratus_M_contig67.17711.1|organism=Fucus serratus male|type=CDS|length=7878bp|location=Sequence derived from alignment at F-serratus_M_contig67:139133..150513+ (Fucus serratus male)back to top |