mRNA_F-serratus_M_contig669.17695.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig669.17695.1
Unique NamemRNA_F-serratus_M_contig669.17695.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig669.17695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig669contigF-serratus_M_contig669:303929..306883 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size1051
Cds size1050
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig669.17695.1prot_F-serratus_M_contig669.17695.1Fucus serratus malepolypeptideF-serratus_M_contig669 303929..306883 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932047.9773092-CDS-F-serratus_M_contig669:303928..3039991622932047.9773092-CDS-F-serratus_M_contig669:303928..303999Fucus serratus maleCDSF-serratus_M_contig669 303929..303999 +
1690964119.3652875-CDS-F-serratus_M_contig669:303928..3039991690964119.3652875-CDS-F-serratus_M_contig669:303928..303999Fucus serratus maleCDSF-serratus_M_contig669 303929..303999 +
1622932047.9942753-CDS-F-serratus_M_contig669:304783..3049101622932047.9942753-CDS-F-serratus_M_contig669:304783..304910Fucus serratus maleCDSF-serratus_M_contig669 304784..304910 +
1690964119.376284-CDS-F-serratus_M_contig669:304783..3049101690964119.376284-CDS-F-serratus_M_contig669:304783..304910Fucus serratus maleCDSF-serratus_M_contig669 304784..304910 +
1622932048.0069602-CDS-F-serratus_M_contig669:306031..3068831622932048.0069602-CDS-F-serratus_M_contig669:306031..306883Fucus serratus maleCDSF-serratus_M_contig669 306032..306883 +
1690964119.3875873-CDS-F-serratus_M_contig669:306031..3068831690964119.3875873-CDS-F-serratus_M_contig669:306031..306883Fucus serratus maleCDSF-serratus_M_contig669 306032..306883 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig669.17695.1

>prot_F-serratus_M_contig669.17695.1 ID=prot_F-serratus_M_contig669.17695.1|Name=mRNA_F-serratus_M_contig669.17695.1|organism=Fucus serratus male|type=polypeptide|length=350bp
GASNGSDGGGSDGAVVSTTILDKMPKPTIAAISMMGSAMKRNAQTITSLG
GTVLTPTSPYDAVSAEMGTLYETSGNWEYHPTVPPPPVGSPQVRLDPRGS
ARTFLYANNSTVDPDDDSNGRNDNDDNYDQDEESQDHENHELSIDKREEA
NAEVDGRDERTITTIIDGDDGSGNVNVVNDIDDGDDGGNSLGEPVTEDKS
LTVAAAVVAVDGKSNKERGRRSRTTTTKNNIFARLREAAPLFAELRTRSR
SPSSHDDRAAVATVASGGGVGTVSSVPPGASEALKLLTSGVRSQSRVPSP
APPLTGGVHEALARANAAAIAEGALALGSAPPVLSLEATLPPPHNSRHSL
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mRNA from alignment at F-serratus_M_contig669:303929..306883+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig669.17695.1 ID=mRNA_F-serratus_M_contig669.17695.1|Name=mRNA_F-serratus_M_contig669.17695.1|organism=Fucus serratus male|type=mRNA|length=2955bp|location=Sequence derived from alignment at F-serratus_M_contig669:303929..306883+ (Fucus serratus male)
GGGGCTAGTAACGGGAGCGATGGAGGCGGAAGCGATGGCGCGGTGGTGTC
GACGACGATTCTAGACAAAATGTGAGTTGTCAAAATGTGTGAGAGAGAGA
ACAAGGGAGACGACGGAATATGTGCCTCTTCCAGCGTGTCCAACCAAAAT
GGTACTACTGAGAGTATTAGTGCTGTGCTGCGCTGCGATGAATAACTGAA
GTTTTGATATGAGTATAGTCTATATATATATATATATATTATAACATGTG
TAGATATTATACATAGGGGCGTGCTGGTTAGCAGAAGCGATGAGTGGTAT
CCTTTTGTTTTGAGGTGTGAGCTTCTGTGGCTCATTGTCGCGGCAGCGTT
TTCAAATATCCACTCTCGATGTCAGGAGAAACGATTTATGGCTCTCGCGG
TATGACAATGGTATGACAATGGTATGACGATCTATGACAATGGTATGACG
ATCACAAGATAGTACTTATACGCTTGATACTTGTGTGTGACGGCAATACA
TTCAGCGCAGTAGTTTCTGCTTCAGTCGTTTATATTAATGGATTTTAATT
TCCTTAAGTCTACTGTTTTCGATAGTCCTTTTTTTAAAAAATGATATATA
TCTCCGCAATTGTTTCTTCGTTCCGTGGTCTCGTCTCGTCTCGTCAAGTC
CAGCTGTGACCATACATGTGTCGTACTTCCCTGTTTTCGCTCTTACTCTG
CAGAAAGAAAAAAATTAACACGTGGAGAAAATTGGATCTGGATTGTTGAG
TAAACTTAGCCTAACCTATATAGTTGCTTCAACCCATCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCTGTCTTTCGCTCTCTCTCTTTTCGTTTGTCTTC
CTAAGGCCGAAGCCGACAATCGCGGCCATAAGCATGATGGGGTCGGCTAT
GAAAAGAAATGCTCAGACCATCACGTCGCTCGGAGGGACGGTGCTGACGC
CCACGTCGCCCTACGACGCTGTCTCGGCAGAAGTGAGTTTTTTTTTTTTT
TTTCCCGCTAACTCTCTCCGTTCTCCATCTTATTCCGTGTTGAATCGATC
CGAATTGGAATATAGTCACGAAGCGGCGTTGAGGTTGATGAAGGAGCTTA
TCGGAGTGTATAAGATTGTTAGCTTCTCCGCCCCGAAAGAACTTTTTGCG
CGGCGCTGAAAAAGGCCTCCATGTGACGGAAACCCCTTGTAGTTCTGGGT
GTTTTATTTTCCGGCGTTGTTCATTTACGATTGCTCGGCTAGCTGAGTGT
AAATAACTTTGTGTTGGAGGAGGGGAGGAGGAAAAAAAACGAGATCATCC
CTGGTATTCATATGAAGTACGTGAAGTGCACGATACCTTGGCCAATGAAA
AGTCGATCTGCTCGACACTCAAAACTAGCCTCTCCAGAGGACAGAGCGTT
CTTCCCTTGTTAGGTGTAACGCATTACTATGACTACTGCAGTATATTGCT
ATTACTATTAGTAATACTATTACTAATACTAGTGTTACTATTACTAGTAT
TTTGTTTTGTAAAGGTCACGTCAATGGAATTTATTTGTGAAAAAAAATGT
TCCGAGGGTTGTAATTTTGTCATAATTTTGTCAGCCGCGCGATTTTCGTC
GCGTTTTTGTAGAGATCATCCCTGCTATGAAAGTGCACCATACCTTGGCC
AATGGAAAGTCGATCTGCTCGACACTCAAAACTGATCTCTCCGGAGGACA
GAGCGTTCTTCCCTTGCTAGGTGTAACGCATTACTATTACTACTACAGTA
CTGTATATTACTATTGCTATTACTAATACTAAAACTAATACTAGTGTTAC
TATTACTAGTATTTTGTATTGTAAAGGTCATGACAATGAAAGTTATTTGT
GAAAAAAATATGTTCCGAGGGTTGTAATTTTGACATTATTTTGTCGGCCG
CGCGATTTTCGTCGCGTTTTTGTAGACTCTCTAACCTATTTTAATAGCGT
ATTAACCTAATATTACTTTCAGTACCACTCTTTTCTTATATTCGATGCCC
CTTCGTGTGCAAATTCTTCTTTTGAGTGAAATATGCTCCGATCCCCGATC
CCCCCCCTATGTTTCCCTTCGTCATGAACACCCTTTTATCCCGCATGGTC
AAGATGGGCACTCTATACGAGACCTCGGGCAATTGGGAGTACCATCCCAC
GGTGCCCCCGCCCCCGGTAGGATCCCCGCAGGTACGCCTCGACCCGCGAG
GATCAGCGAGAACCTTTCTGTACGCCAACAACAGCACAGTGGACCCAGAT
GACGACAGTAACGGCAGAAACGACAATGATGACAATTATGACCAAGACGA
GGAAAGCCAGGACCACGAGAACCACGAGCTATCGATAGATAAAAGGGAGG
AAGCAAACGCAGAGGTAGACGGAAGAGATGAGCGCACCATTACTACCATC
ATCGACGGTGACGATGGTAGTGGTAATGTCAATGTCGTTAATGATATCGA
TGATGGTGATGATGGCGGGAACAGTCTGGGCGAGCCGGTAACGGAGGACA
AGAGCCTCACGGTGGCGGCTGCTGTAGTAGCCGTCGATGGGAAATCGAAC
AAAGAGCGCGGCAGGAGATCGAGAACGACCACCACCAAGAATAATATTTT
CGCGAGACTGAGAGAAGCGGCCCCCCTCTTCGCGGAGCTGAGGACCCGCT
CGCGATCGCCCTCATCTCACGATGACAGGGCGGCCGTTGCGACGGTGGCC
TCAGGAGGGGGAGTGGGGACGGTTTCTTCCGTGCCTCCCGGGGCCTCCGA
GGCGCTCAAGTTGCTGACCTCAGGGGTTCGATCGCAATCGCGGGTGCCGT
CCCCGGCTCCTCCTCTCACGGGCGGGGTCCACGAGGCCCTGGCTCGGGCG
AATGCCGCCGCGATAGCGGAGGGAGCGCTCGCGCTCGGTTCCGCCCCCCC
CGTACTTTCTCTGGAGGCTACTCTGCCGCCCCCCCATAACTCGCGTCACT
CGCTG
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Coding sequence (CDS) from alignment at F-serratus_M_contig669:303929..306883+

>mRNA_F-serratus_M_contig669.17695.1 ID=mRNA_F-serratus_M_contig669.17695.1|Name=mRNA_F-serratus_M_contig669.17695.1|organism=Fucus serratus male|type=CDS|length=2100bp|location=Sequence derived from alignment at F-serratus_M_contig669:303929..306883+ (Fucus serratus male)
GGGGCTAGTAACGGGAGCGATGGAGGCGGAAGCGATGGCGCGGTGGTGTC
GACGACGATTCTAGACAAAATGGGGCTAGTAACGGGAGCGATGGAGGCGG
AAGCGATGGCGCGGTGGTGTCGACGACGATTCTAGACAAAATGCCGAAGC
CGACAATCGCGGCCATAAGCATGATGGGGTCGGCTATGAAAAGAAATGCT
CAGACCATCACGTCGCTCGGAGGGACGGTGCTGACGCCCACGTCGCCCTA
CGACGCTGTCTCGGCAGAAGCCGAAGCCGACAATCGCGGCCATAAGCATG
ATGGGGTCGGCTATGAAAAGAAATGCTCAGACCATCACGTCGCTCGGAGG
GACGGTGCTGACGCCCACGTCGCCCTACGACGCTGTCTCGGCAGAAATGG
GCACTCTATACGAGACCTCGGGCAATTGGGAGTACCATCCCACGGTGCCC
CCGCCCCCGGTAGGATCCCCGCAGGTACGCCTCGACCCGCGAGGATCAGC
GAGAACCTTTCTGTACGCCAACAACAGCACAGTGGACCCAGATGACGACA
GTAACGGCAGAAACGACAATGATGACAATTATGACCAAGACGAGGAAAGC
CAGGACCACGAGAACCACGAGCTATCGATAGATAAAAGGGAGGAAGCAAA
CGCAGAGGTAGACGGAAGAGATGAGCGCACCATTACTACCATCATCGACG
GTGACGATGGTAGTGGTAATGTCAATGTCGTTAATGATATCGATGATGGT
GATGATGGCGGGAACAGTCTGGGCGAGCCGGTAACGGAGGACAAGAGCCT
CACGGTGGCGGCTGCTGTAGTAGCCGTCGATGGGAAATCGAACAAAGAGC
GCGGCAGGAGATCGAGAACGACCACCACCAAGAATAATATTTTCGCGAGA
CTGAGAGAAGCGGCCCCCCTCTTCGCGGAGCTGAGGACCCGCTCGCGATC
GCCCTCATCTCACGATGACAGGGCGGCCGTTGCGACGGTGGCCTCAGGAG
GGGGAGTGGGGACGGTTTCTTCCGTGCCTCCCGGGGCCTCCGAGGCGCTC
AAGTTGCTGACCTCAGGGGTTCGATCGCAATCGCGGGTGCCGTCCCCGGC
TCCTCCTCTCACGGGCGGGGTCCACGAGGCCCTGGCTCGGGCGAATGCCG
CCGCGATAGCGGAGGGAGCGCTCGCGCTCGGTTCCGCCCCCCCCGTACTT
TCTCTGGAGGCTACTCTGCCGCCCCCCCATAACTCGCGTCACTCGCTGAT
GGGCACTCTATACGAGACCTCGGGCAATTGGGAGTACCATCCCACGGTGC
CCCCGCCCCCGGTAGGATCCCCGCAGGTACGCCTCGACCCGCGAGGATCA
GCGAGAACCTTTCTGTACGCCAACAACAGCACAGTGGACCCAGATGACGA
CAGTAACGGCAGAAACGACAATGATGACAATTATGACCAAGACGAGGAAA
GCCAGGACCACGAGAACCACGAGCTATCGATAGATAAAAGGGAGGAAGCA
AACGCAGAGGTAGACGGAAGAGATGAGCGCACCATTACTACCATCATCGA
CGGTGACGATGGTAGTGGTAATGTCAATGTCGTTAATGATATCGATGATG
GTGATGATGGCGGGAACAGTCTGGGCGAGCCGGTAACGGAGGACAAGAGC
CTCACGGTGGCGGCTGCTGTAGTAGCCGTCGATGGGAAATCGAACAAAGA
GCGCGGCAGGAGATCGAGAACGACCACCACCAAGAATAATATTTTCGCGA
GACTGAGAGAAGCGGCCCCCCTCTTCGCGGAGCTGAGGACCCGCTCGCGA
TCGCCCTCATCTCACGATGACAGGGCGGCCGTTGCGACGGTGGCCTCAGG
AGGGGGAGTGGGGACGGTTTCTTCCGTGCCTCCCGGGGCCTCCGAGGCGC
TCAAGTTGCTGACCTCAGGGGTTCGATCGCAATCGCGGGTGCCGTCCCCG
GCTCCTCCTCTCACGGGCGGGGTCCACGAGGCCCTGGCTCGGGCGAATGC
CGCCGCGATAGCGGAGGGAGCGCTCGCGCTCGGTTCCGCCCCCCCCGTAC
TTTCTCTGGAGGCTACTCTGCCGCCCCCCCATAACTCGCGTCACTCGCTG
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