mRNA_F-serratus_M_contig659.17559.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig659.17559.1 vs. uniprot
Match: A0A6H5KUW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW2_9PHAE) HSP 1 Score: 233 bits (595), Expect = 4.200e-60 Identity = 140/251 (55.78%), Postives = 174/251 (69.32%), Query Frame = 1
Query: 337 RKAELDTRLEWVEDLRAKAFGHCRKGNLKALRPLFGVQEGLGPAFMLKMSDRQENNAKEGATMLHMCVTER-RERDVPKSVRDGRREVAAFLVQGIVMVHTHAGGERDRVDLSKVDRRGLTVLQKATAEGDMDLLKLLLEERTRSVALKMEADLDATCLEKGWTPLMYAAAGGYVEAVIALLEAGSRVNLLSNPTVAAVVEERSLPQQTALAVCETALTSATDLGPEQETCLQEVVEILSSAVEQVERSKR 1086
RKAE+D++ E E +RA+AF CR+GNL LRP+ G A +K+SDRQ+ K GAT+LHMCV+ E + +V GR EVA +L+QG V AGGERDRVDLSKVD +GLTVL KA AEGD LL LLL ERTRS LK+E DLDATCLEKGWTPLM+AA G + A+ ALL AGSRV LSNPTV +V +PQQTAL +C+ AL+S L ++ L VE+LS+AV++VE++KR
Sbjct: 303 RKAEMDSKREKAEAVRARAFELCREGNLPDLRPMLEKHGGGASAPSVKLSDRQDGQGKSGATLLHMCVSPGVGEGETSDAVVKGRLEVATYLLQGTVK--KDAGGERDRVDLSKVDAQGLTVLHKAAAEGDDALLDLLLRERTRSTTLKLETDLDATCLEKGWTPLMHAAFRGNLHAMSALLAAGSRVTQLSNPTVTGMV----VPQQTALEICQAALSSTKRLVEKKN--LTAAVEVLSAAVDKVEKAKR 545
BLAST of mRNA_F-serratus_M_contig659.17559.1 vs. uniprot
Match: D7G4G1_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G1_ECTSI) HSP 1 Score: 231 bits (589), Expect = 2.480e-59 Identity = 136/249 (54.62%), Postives = 172/249 (69.08%), Query Frame = 1
Query: 343 AELDTRLEWVEDLRAKAFGHCRKGNLKALRPLFGVQEGLGPAFMLKMSDRQENNAKEGATMLHMCVTER-RERDVPKSVRDGRREVAAFLVQGIVMVHTHAGGERDRVDLSKVDRRGLTVLQKATAEGDMDLLKLLLEERTRSVALKMEADLDATCLEKGWTPLMYAAAGGYVEAVIALLEAGSRVNLLSNPTVAAVVEERSLPQQTALAVCETALTSATDLGPEQETCLQEVVEILSSAVEQVERSKR 1086
AE+D++ E E +RA+AF CR+GNL LRP+ Q+G A +K+SDRQ+ K GAT+LHMCV+ E +V GR EVA +L+QG V AGGERDRVDLSKVD +GLTVL KA EGD LL LLL ERTRS LK+E DLDATCLEKGWTPLM+A+ G + A+ ALL AGSRV LSNPTV +V +PQQTAL +C+ AL+S L ++ L VE+L++AV++VE++KR
Sbjct: 316 AEMDSKREKAEAVRARAFELCREGNLPDLRPMLEKQDGAASAPSVKLSDRQDGKGKSGATLLHMCVSPGVGEGQTSDAVGKGRLEVATYLLQGTVK--KDAGGERDRVDLSKVDAQGLTVLHKAAGEGDDALLDLLLRERTRSTTLKLETDLDATCLEKGWTPLMHASFRGNIHAMSALLAAGSRVTQLSNPTVTGMV----VPQQTALEICQAALSSTKRLKEKKN--LTAAVEVLAAAVDKVEKAKR 556 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig659.17559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig659.17559.1 >prot_F-serratus_M_contig659.17559.1 ID=prot_F-serratus_M_contig659.17559.1|Name=mRNA_F-serratus_M_contig659.17559.1|organism=Fucus serratus male|type=polypeptide|length=502bp MQREAERAQARTNAKANRERIRQAEKVEEEKRAAKALAEKQEEKMKRKAEback to top mRNA from alignment at F-serratus_M_contig659:284738..300952+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig659.17559.1 ID=mRNA_F-serratus_M_contig659.17559.1|Name=mRNA_F-serratus_M_contig659.17559.1|organism=Fucus serratus male|type=mRNA|length=16215bp|location=Sequence derived from alignment at F-serratus_M_contig659:284738..300952+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig659:284738..300952+ >mRNA_F-serratus_M_contig659.17559.1 ID=mRNA_F-serratus_M_contig659.17559.1|Name=mRNA_F-serratus_M_contig659.17559.1|organism=Fucus serratus male|type=CDS|length=3012bp|location=Sequence derived from alignment at F-serratus_M_contig659:284738..300952+ (Fucus serratus male)back to top |