mRNA_F-serratus_M_contig6537.17516.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6537.17516.1 vs. uniprot
Match: K7ZUA3_ASCNO (Vanadium-dependent bromoperoxidase 2 n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=K7ZUA3_ASCNO) HSP 1 Score: 130 bits (326), Expect = 1.220e-33 Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 1
Query: 1 NVPNFVGQFHKSLPHDELGQVDPAAYQLLLDCIKSNDINVCDQVPSGVESGGRKLVNPLGGGGHQVDGAD 210
NVP F GQFHKSLPHD++G+V+P AYQLLLDCI+SNDINVCDQVPSGVES GRKLVNPLGGGGHQVDGAD
Sbjct: 86 NVPLFDGQFHKSLPHDDVGRVNPEAYQLLLDCIESNDINVCDQVPSGVESDGRKLVNPLGGGGHQVDGAD 155
BLAST of mRNA_F-serratus_M_contig6537.17516.1 vs. uniprot
Match: D8LTP5_ECTSI (Vanadium-dependent bromoperoxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP5_ECTSI) HSP 1 Score: 106 bits (265), Expect = 2.790e-25 Identity = 47/70 (67.14%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 1 NVPNFVGQFHKSLPHDELGQVDPAAYQLLLDCIKSNDINVCDQVPSGVESGGRKLVNPLGGGGHQVDGAD 210
NVP+F+GQFHKSLPHD+ G V +YQ LLDC+ S D+NVCDQVPSG + G K++NPLGG HQVDGAD
Sbjct: 83 NVPDFIGQFHKSLPHDKFGTVSKTSYQKLLDCVFSADVNVCDQVPSGASARGAKMINPLGGTAHQVDGAD 152
BLAST of mRNA_F-serratus_M_contig6537.17516.1 vs. uniprot
Match: A0A411NJW8_SACJA (Vanadium-dependent bromoperoxidase (Fragment) n=3 Tax=Saccharina japonica TaxID=88149 RepID=A0A411NJW8_SACJA) HSP 1 Score: 85.9 bits (211), Expect = 5.800e-18 Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 13 FVGQFHKSLPHDELGQVDPAAYQLLLDCIKSNDINVCDQVPSGVESGGRKLVNPLGGGGHQVDGAD 210
GQ+HK+LPH++ GQV+ YQ LLDC++++DINVCD VP+G G KL NPLGG HQVDGAD
Sbjct: 129 LAGQYHKTLPHNKYGQVNKDDYQKLLDCVRTSDINVCDNVPAG---GSAKLTNPLGGTAHQVDGAD 191
BLAST of mRNA_F-serratus_M_contig6537.17516.1 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO) HSP 1 Score: 60.8 bits (146), Expect = 3.710e-9 Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 10 NFVGQFHKSLPHDELGQVDPAAYQLLLDCIKSNDINVCDQVPSGVESGGR--KLVNP 174
+ +FHKSLPHD+LGQVD A+ L DCI + D+++C+ VP G G +LVNP
Sbjct: 49 DLAAKFHKSLPHDDLGQVDADAFAALEDCILNGDLSICEDVPVGNSEGDPVGRLVNP 105
BLAST of mRNA_F-serratus_M_contig6537.17516.1 vs. uniprot
Match: UPI001359B6F0 (vanadium-dependent haloperoxidase n=1 Tax=Methylicorpusculum oleiharenae TaxID=1338687 RepID=UPI001359B6F0) HSP 1 Score: 60.5 bits (145), Expect = 5.050e-9 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 4 VPNFVGQFHKSLPHDELGQVDPAAYQLLLDCIKSNDINVCDQVPSGVESGGRKLVNPLGGGGHQVDGAD 210
VPN+ GQFHKSLPH+ G V P AY LL+ I++ +Q+P+G G KL NPL + ++G D
Sbjct: 63 VPNYSGQFHKSLPHNNNGMVAPLAYGKLLEAIQTGTFEAFEQIPAG---GPVKLANPLAAQVYDLEGRD 128
BLAST of mRNA_F-serratus_M_contig6537.17516.1 vs. uniprot
Match: A0A3G3BM28_SACJA (Vanadium-dependent iodine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM28_SACJA) HSP 1 Score: 60.5 bits (145), Expect = 5.100e-9 Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 1 NVPNF--VGQFHKSLPHDELGQVDPAAYQLLLDCIKSNDINVCDQVPSGVESGGRKLVNPLGG 183
N+ +F FHKSLPHDELGQV ++ L++C+ S D + C +VP+G G LVNPLGG
Sbjct: 96 NLGDFSSAATFHKSLPHDELGQVFSFDFEELIECVASGDFDTCQEVPAGNVEG--FLVNPLGG 156
BLAST of mRNA_F-serratus_M_contig6537.17516.1 vs. uniprot
Match: B7ZGM6_9PHAE (Putative vanadium-dependent iodoperoxidase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM6_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 6.950e-9 Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 25 FHKSLPHDELGQVDPAAYQLLLDCIKSNDINVCDQVPSGVESGGRKLVNPLGG 183
FHKSLPHD LGQVD AA++ L +CI D ++C+ VP+G +L NPL G
Sbjct: 113 FHKSLPHDSLGQVDSAAFEALTECIAQGDFDICELVPAGDVG---RLSNPLAG 162
BLAST of mRNA_F-serratus_M_contig6537.17516.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 1.780e-8 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 25 FHKSLPHDELGQVDPAAYQLLLDCIKSNDINVCDQVPSGVESGGRKLVNPLGG 183
FHKSLPHD LGQV+ + LL++CI D + C+ VP+G + +L NPLGG
Sbjct: 113 FHKSLPHDSLGQVNSEDFDLLMECIAQGDFDTCELVPAGDDG---RLSNPLGG 162
BLAST of mRNA_F-serratus_M_contig6537.17516.1 vs. uniprot
Match: O82433_FUCDI (Vanadium bromoperoxidase n=1 Tax=Fucus distichus TaxID=3012 RepID=O82433_FUCDI) HSP 1 Score: 58.9 bits (141), Expect = 1.780e-8 Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 10 NFVGQFHKSLPHDELGQVDPAAYQLLLDCIKSNDINVCDQVPSGVESGGRKLVNP 174
+ FHKSLPHDELGQV + +L DCI + D ++C+ VP+G +G +LVNP
Sbjct: 172 DLATMFHKSLPHDELGQVTADDFAILEDCILNGDFSICEDVPAGDPAG--RLVNP 224
BLAST of mRNA_F-serratus_M_contig6537.17516.1 vs. uniprot
Match: UPI0019EFA36E (Vanadium-dependent haloperoxidase n=1 Tax=Nostocales cyanobacterium LEGE 11386 TaxID=1828825 RepID=UPI0019EFA36E) HSP 1 Score: 58.2 bits (139), Expect = 3.310e-8 Identity = 31/68 (45.59%), Postives = 38/68 (55.88%), Query Frame = 1
Query: 7 PNFVGQFHKSLPHDELGQVDPAAYQLLLDCIKSNDINVCDQVPSGVESGGRKLVNPLGGGGHQVDGAD 210
PNF+ F K LPH+ELG+VD AY LL +KS + +P G GRKL NP G G + G D
Sbjct: 79 PNFIANFSKGLPHNELGEVDAKAYNALLKALKSGKPQDFEAIPLGK---GRKLTNPQAGLGFDLQGPD 143 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6537.17516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6537.17516.1 >prot_F-serratus_M_contig6537.17516.1 ID=prot_F-serratus_M_contig6537.17516.1|Name=mRNA_F-serratus_M_contig6537.17516.1|organism=Fucus serratus male|type=polypeptide|length=70bp NVPNFVGQFHKSLPHDELGQVDPAAYQLLLDCIKSNDINVCDQVPSGVESback to top mRNA from alignment at F-serratus_M_contig6537:7826..8744+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6537.17516.1 ID=mRNA_F-serratus_M_contig6537.17516.1|Name=mRNA_F-serratus_M_contig6537.17516.1|organism=Fucus serratus male|type=mRNA|length=919bp|location=Sequence derived from alignment at F-serratus_M_contig6537:7826..8744+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6537:7826..8744+ >mRNA_F-serratus_M_contig6537.17516.1 ID=mRNA_F-serratus_M_contig6537.17516.1|Name=mRNA_F-serratus_M_contig6537.17516.1|organism=Fucus serratus male|type=CDS|length=420bp|location=Sequence derived from alignment at F-serratus_M_contig6537:7826..8744+ (Fucus serratus male)back to top |