mRNA_F-serratus_M_contig650.17490.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: D7G625_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G625_ECTSI) HSP 1 Score: 291 bits (745), Expect = 1.670e-85 Identity = 171/264 (64.77%), Postives = 204/264 (77.27%), Query Frame = 3
Query: 198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRSMRTLVREIERLLTSSSGFEGGEG--ARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSD-MSQGRASVSRQMEIVRRMQRSYPFLRPEGG 980
+AI KQ+ FRER S L+D+ + DAE SL+NML DFV + KN VPE+LR+ VAAMDMSVVSR LE+ET+ +IRGTV+GRIPRML IQ TFLKKELL +M IDEL+QANQVTLRLIS +PAAL++ V KV+ + AA SRRLEPTT VHRSMR +REIERLLTSS GF G AEG+ A GLL DEE GKLAL +H LQ LRQN+SRF++R RR LEEDL+D M++GR +VS+Q+ +V RMQRSYPFLR GG
Sbjct: 1887 EAIRKQVFFRER-SELMDKDSLEDAETSLQNMLHDFVYDDKNNVPEDLREEAVAAMDMSVVSRELEEETKYSIRGTVNGRIPRMLFIQATFLKKELLHSMQAIDELFQANQVTLRLISVIPAALLLFAVAKVSGPFVHAASSRRLEPTTAVHRSMRASLREIERLLTSSRGFVGSHEPVGEEAEGF-ASRGLLQDEEMGKLALHMHELQTTLRQNASRFDSRARRRLEEDLTDLMARGRPTVSQQIAVVHRMQRSYPFLRAGGG 2148
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A6H5L1C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C8_9PHAE) HSP 1 Score: 244 bits (624), Expect = 2.650e-69 Identity = 166/305 (54.43%), Postives = 197/305 (64.59%), Query Frame = 3
Query: 198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQT----------------TFLKKELLQAMGGIDELYQANQ------------------------VTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRSMRTLVREIERLLTSSSGFEGGEGARRAEGWTAGAGLLDDEETGKLALFLHT----LQNILRQNSSRFEARVRRGLEEDLSD-MSQGRASVSRQMEIVRRMQRSYPFLRPEG 977
+AI KQI FRER S L+D+ + DAE SL+NML DFV + KN VPE LR+ VAAMDMSVVSR LE+ET+ +IRGTV+GRIPRMLLIQ TFLKKELL +M IDEL+QANQ VTLRLIS +PAAL++ V KV+ + AA SRRLEPTT VHRSMR +REIERLLT G G EG+ A GLL DEE GKLA+ H Q LRQN+SRF++R RR LEEDL+D M++GR +VS+Q+ +V RMQRSYPFLR G
Sbjct: 1934 EAIGKQIFFRER-SELMDKDSLEDAETSLQNMLHDFVYDDKNNVPENLREEAVAAMDMSVVSRQLEEETKYSIRGTVNGRIPRMLLIQASSFLNPTTSIAPARIATFLKKELLHSMQAIDELFQANQASAGALFTAAAYCSAHSKIFALAWVTLRLISVIPAALLLFAVAKVSGPFVHAASSRRLEPTTAVHRSMRASLREIERLLTGFVGSHEPVG-EELEGF-ASRGLLQDEEMGKLAVRGHVDCELSQTTLRQNASRFDSRTRRRLEEDLADLMARGRPTVSQQIAVVHRMQRSYPFLRAGG 2235
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A835Z2D9_9STRA (ATP synthase regulation protein NCA2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D9_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.280e-53 Identity = 126/290 (43.45%), Postives = 178/290 (61.38%), Query Frame = 3
Query: 201 AIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRSMRTLVREIERLLTSSSGF-----------------EGGEGARRAEGWT---AGAGL-----LDDEET----------GKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
AI +LFR RQ+ L +E A DA+ SL+N+LRDF+ + + KVPE+ R+ + MDM+ ++R EKE A+RG ++G + R+LLIQ LK + L AM ID+LY ANQ+ L+L+++LPA +V+AG + V + A SRRLEPT +VH MR +RE+ER LT+SS F +GG G+ G T AGAG +D + T G L L +H Q +L+QN+SRF+AR RRG+EEDL D+ +V++Q+ +VRRMQR+YPFL
Sbjct: 840 AIVNGVLFRRRQA-LTEEGAMEDAKTSLQNLLRDFLKDMQPKVPEQEREQQASQMDMTPITRRFEKEASRALRGIIAGPLLRVLLIQIAHLKLQGLSAMEAIDDLYNANQLNLQLLASLPALIVVAGTYFVARNVFFAIMSRRLEPTAIVHAGMRGALREVERALTNSSAFSRQAQPLILREAVDGPDDGGAGSDIGGGDTFVVAGAGQDRIGGIDRDTTSILGLSAGGCGALVLQVHLFQQLLQQNASRFDARTRRGVEEDLRDLLAHGITVTQQLAVVRRMQRTYPFL 1128
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: W7TDI7_9STRA (Nuclear control of ATP synthase 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDI7_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.660e-40 Identity = 116/325 (35.69%), Postives = 177/325 (54.46%), Query Frame = 3
Query: 36 MQAPTVSRFLLGTARGVLPLPMIRESCT--SRCFGLRCVAA---DFTVTVAVAMLLGDGQAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRSMRTLVREIERLLTSSSGFEGGEGARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDM--SQGRASVSRQMEIVRRMQRSYPFLR---PEGG 980
+ P ++ +L T RG + +R + SR ++ AA T L G+AI + ++ +RQ L DE A DA+ASLR ML DF+++ + + + AMD+S+VS +KE R A+R SG+I RMLLIQ ++KKELL AM ID+LY AN+V L+ + +PA L+ ++++ L A SRR+ + VH S+R +R++ERLL + A +LDD G++ L + QNILR N+ R E VRR L ED+SD+ GR +V +Q+ + R++++Y FL+ P GG
Sbjct: 786 LDRPKMNEWLAWTLRGAAYVFFLRTTAELWSRRESIQATAALTKKNTEEFLAYRFLEPGKAILEDLILNKRQR-LTDEGAITDAQASLRRMLSDFIDDTYPHIDPATKKAALEAMDISLVSAQYDKEIRHAVRNVFSGKIVRMLLIQMQYVKKELLVAMEAIDDLYNANKVNLQAFAVVPALLLTYCAYRMSLYLFGALASRRISNISGVHASLRRTLRDLERLLILAPRLPPSVTPSLPSSLGAKTTVLDDRRLGEVVLLVADFQNILRVNAPRLEKGVRRALMEDMSDLLGGPGRLTVEQQLTSLNRVRKAYAFLQSRTPGGG 1109
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A024GNH7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GNH7_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.570e-33 Identity = 97/261 (37.16%), Postives = 148/261 (56.70%), Query Frame = 3
Query: 201 AIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRS----MRTLVREIERLLTSSSGFEG--GEGARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
AI +ILF R++ + D AA DA+ASL+ ML DF + +P + + V +MDMS+VS EK+ A+R ++G I RMLLIQ F+KKEL+ AMG ID+L ANQ+ L+L++T+P L AG++ +T +L + + E + R +R +R+IERLL + EG A+ T L+ + G L L LH L+++ + F + EEDLSD+ + VS+++ +++RM SYPFL
Sbjct: 332 AILGEILFN-RKNDIQDAAALLDAKASLQRMLHDFACDTNPNMPPQELERKVESMDMSLVSFVYEKQLSTAVRSLMTGDIVRMLLIQIQFIKKELMVAMGAIDDLMHANQLNLQLLATIPTILAGAGIYGLTKMLFFQLYRKTTEHLSYDSREVASHLRRFLRDIERLLNKQNRGSSLQAEGVEEAQWHT-----LNARDLGYLILLLHQLRSLFDSHRVLFRDEDQVRFEEDLSDLLEEGLYVSQRLAVIQRMYHSYPFL 586
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A8K1CMR2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMR2_PYTOL) HSP 1 Score: 138 bits (348), Expect = 5.460e-33 Identity = 91/260 (35.00%), Postives = 137/260 (52.69%), Query Frame = 3
Query: 198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTL----VHRSMRTLVREIERLLTSSSGFEGGEGARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
QAI +++ ++ + D AA D SL+ ML DF + + +V MDMSVVS EK+ A+R +SG I RMLLIQ F+KKEL+ AMG IDEL ANQ+ L++++T+P LV GV+ + L + R E + +R ++R+IERLL + +G + G + G L L LH L ++ N FE ++ +EDL+D+ + VS+Q+ +++RM SYPFL
Sbjct: 349 QAIVGEVILNQKPE-IQDAAALLDTRESLQRMLSDFARDTNPNITSSELQRIVKDMDMSVVSLQYEKQLGSAVRNLMSGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNLQVMATIPTFLVFGGVYTLAKALFAEIYKRTSERLYYDMADIAGFLRNILRDIERLLNKQNRVSWPDGTGEDDAMRLGT-----RDLGLLLLLLHQLHDVYESNREFFEEEEQQRFDEDLNDLVEEGLLVSQQLAVIQRMYHSYPFL 602
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: M4BLQ4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BLQ4_HYAAE) HSP 1 Score: 137 bits (345), Expect = 1.280e-32 Identity = 94/265 (35.47%), Postives = 141/265 (53.21%), Query Frame = 3
Query: 198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLE----PTTLVHRSMRTLVREIERLLTSSSGFEGGEGARRAEGWTAGAGLLDD-----EETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
QAI +++ ++ + D A D + SLR ML DFV + V + D + MDMSVVS EK+ GA+R ++G I RMLLIQ F+KKEL+ AMG IDEL ANQ+ L++++T+P LV G++K+ T + R + +T + R +R +R+IERLL + G G DD + G L L LH L+++ + F+ EEDL+D+ VS+Q+ +++RM S+PFL
Sbjct: 338 QAIFVEVVLNQKPE-IQDAMALLDTKQSLRRMLADFVKDTNPNVTQADMDRITNEMDMSVVSLQYEKQLTGAVRNLITGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNLQILATIPTFLVFGGLYKLVTSTFHMIYKRMSDRLYYDSTEIARFLRNNLRDIERLLNKQN---------------RGVGASDDAVLGVRDLGFLILLLHQLRDLFEAYRALFQEEEHERFEEDLNDLIGEGLLVSQQLAVIQRMYHSHPFL 586
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: F0W8C8_9STRA (Uncharacterized protein AlNc14C236G9393 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8C8_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.350e-32 Identity = 98/264 (37.12%), Postives = 148/264 (56.06%), Query Frame = 3
Query: 201 AIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRS----MRTLVREIERLLT-----SSSGFEGGEGARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
AI +ILF R++ + D AA DA+ASL+ ML DF + +P + + V +MDMS+VS EK+ A+R ++G I RMLLIQ F+KKEL+ AMG ID+L ANQ+ L+L++T+P L AG++ +T +L + + E + R +R +R+IERLL SS +G E A+ W LD + G L L L+ L+ + + F + EEDL D+ + VS+++ +++RM SYPFL
Sbjct: 330 AIVGEILFN-RKTDIQDAAALLDAKASLQRMLHDFACDTNPSMPPQELQSKVESMDMSLVSFVYEKQLSTAVRNLMTGDIVRMLLIQIQFIKKELMVAMGAIDDLMHANQLNLQLLATIPTILAGAGIYGLTKMLFFQLYKKTTEHVSYDSREVASHLRRFLRDIERLLNKQNRGSSLQIKGAEEAQ----WHT----LDARDLGYLVLLLYQLRGLFDSHRVLFRDEDQVRFEEDLCDLLEEGLYVSQRLAVIQRMYHSYPFL 584
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A2D4CDF1_PYTIN (VOC domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDF1_PYTIN) HSP 1 Score: 135 bits (339), Expect = 1.750e-31 Identity = 97/269 (36.06%), Postives = 142/269 (52.79%), Query Frame = 3
Query: 198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLE----PTTLVHRSMRTLVREIERLLTSSS-GFEGGEGARRAEGWTA----GAGLLDD----EETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
QAI ++L ++ + D AA D + SLR ML DFV + E VV MDMSVVS EK+ A+R +SG I RMLLIQ F+KKEL+ AMG IDEL ANQ+ L++++T+P LV G +++ L + R E + +R ++R+IERLL + G + TA G L+DD + G L L LH L+++ F + +EDL+D+ + VS+Q+ +++RM S+PFL
Sbjct: 548 QAIVAEVLLNQKPE-IQDAAALRDTKESLRRMLADFVRDTNPTTNSEELQRVVREMDMSVVSLQYEKQIGNAVRNLMSGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNLQMMATVPTFLVFGGAYQLAKELFFQVYRRTSERLFYDPAEIAGFLRNILRDIERLLNKQNRGGQSXXXXXXXXXXTASGRGGVVLVDDVLGARDMGLLMLLLHQLRDVFDAYKDLFRDEEQERFDEDLNDLIEEGLLVSQQLAVIQRMYHSHPFL 815
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A3M6VUA8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUA8_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.280e-31 Identity = 92/261 (35.25%), Postives = 143/261 (54.79%), Query Frame = 3
Query: 198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLE----PTTLVHRSMRTLVREIERLLTSSS-GFEGGEGARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
QAI ++++ ++ + D A D + SLR ML DFV + + + ++ MDMSVVS EK+ GA+R ++G I RMLLIQ F+KKEL+ AMG IDEL ANQ+ L++++T+P LV G++K+ T + R + ++ + +R +R+IERLL + G G+ A +L E G L L LH L+++ + FE + EEDL D+ VS+Q+ +++RM S+PFL
Sbjct: 353 QAIFEEVVLNQKPE-IQDAMALLDTKQSLRRMLADFVKDTNPNISQTDMSRIMDEMDMSVVSLQYEKQLAGAVRNLITGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNLQILATIPTFLVFGGLYKLVTSAFHMIYKRMSDRLYYDSSEIAGFLRNNLRDIERLLNKQNRGAVVGDDA-----------VLGVRELGFLILLLHQLRDLFEAYRTLFEEEEQERFEEDLDDLIGEGLLVSQQLAVIQRMYHSHPFL 601 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig650.17490.1 >prot_F-serratus_M_contig650.17490.1 ID=prot_F-serratus_M_contig650.17490.1|Name=mRNA_F-serratus_M_contig650.17490.1|organism=Fucus serratus male|type=polypeptide|length=328bp MDVTYSTIAAMQAPTVSRFLLGTARGVLPLPMIRESCTSRCFGLRCVAADback to top mRNA from alignment at F-serratus_M_contig650:62628..66894+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig650.17490.1 ID=mRNA_F-serratus_M_contig650.17490.1|Name=mRNA_F-serratus_M_contig650.17490.1|organism=Fucus serratus male|type=mRNA|length=4267bp|location=Sequence derived from alignment at F-serratus_M_contig650:62628..66894+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig650:62628..66894+ >mRNA_F-serratus_M_contig650.17490.1 ID=mRNA_F-serratus_M_contig650.17490.1|Name=mRNA_F-serratus_M_contig650.17490.1|organism=Fucus serratus male|type=CDS|length=1968bp|location=Sequence derived from alignment at F-serratus_M_contig650:62628..66894+ (Fucus serratus male)back to top |