mRNA_F-serratus_M_contig649.17444.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig649.17444.1
Unique NamemRNA_F-serratus_M_contig649.17444.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig649.17444.1 vs. uniprot
Match: A0A6H5KKT3_9PHAE (U1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKT3_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 3.090e-103
Identity = 187/231 (80.95%), Postives = 210/231 (90.91%), Query Frame = 1 
Query:   49 MSKDLGYKQVKNVEARRTWDRDYYEARAKERIEKGDDFNDNED--TSRLGNKEEFQPAPSGAAGPAGSARAFLKTREKKVDLTSKLGKTQVVTAASTPSQQGGWYCEVCKCGLKDSINYLDHINGRKHQRALGYSMRVERSTVSQVKDRLKMHKEREEEIISGAARKPSAEDEFESRVRESEDAESRXXXXXXXXXXXXXXXXXXXXD-IDFEDPEMAALMGFGGFGSSKK 732
            MSKDLGYKQVKNVE+RRTWDRDYYEA+AKERIE+GDD+ + ++   +R   KEEFQPA  GAAGPAGSARA+LKTRE+KVDL+SKLGKTQVVTAASTPSQQGGWYCE+CKCGLKDSINYLDHING+KHQR LGYSMRVERSTVSQVKDRLKMHK+REE+ ISGA +KPSAEDEF++RVRE+ED E  XXXXXXXXXXXXXXXXXXXX  ++F+DPEMAA+MGFGGFG   K
Sbjct:    1 MSKDLGYKQVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGAPARRSQKEEFQPAAPGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPEMAAMMGFGGFGGGSK 231
[Close]
BLAST of mRNA_F-serratus_M_contig649.17444.1 vs. uniprot
Match: A0A835ZCC8_9STRA (U1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC8_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.420e-54
Identity = 138/231 (59.74%), Postives = 164/231 (71.00%), Query Frame = 1 
Query:   52 SKDLGYKQVKNVEARRTWDRDYYEARAKERIEKGDDFNDNEDTSRLG--NKEEFQPAPSGAAGPAGSARAFLKTREKKVDLTSKLGKTQVVTAASTPSQQGGWYCEVCKCGLKDSINYLDHINGRKHQRALGYSMRVERSTVSQVKDRLKMHKEREEEII--SGAARKPSAEDEFESRVRESEDAESRXXXXXXXXXXXXXXXXXXXXDIDFEDPEMAALMGFGGFGSSKK 732
            S DLG KQV NV  RR+WD + YE +AKER+E+GD+  +    S     NKEEFQPAP GA GPAGS RA+LK R +KVDL S+L KTQV+T+A+  S QGG++CEVCKC LKDSI YLDHING+KHQRALG+SMRVERS+V  VK++L   + R E+    SGA RK SA  E+E R+ E       XXXXXXXXXXXXXXXXXXXX         AA+MGFGGF   K+
Sbjct:    7 SDDLGDKQVSNV-VRRSWDVELYEKKAKERLERGDEVEEARPASSKAALNKEEFQPAPDGAQGPAGSRRAYLKARTEKVDLESRLHKTQVITSAAASSSQGGYWCEVCKCLLKDSIAYLDHINGKKHQRALGFSMRVERSSVGSVKEKLDKLRARAEDAAKASGAPRK-SAVQEYEERLAEYAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMMGFGGFSGGKR 235
[Close]
BLAST of mRNA_F-serratus_M_contig649.17444.1 vs. uniprot
Match: W7U2Z2_9STRA (Zinc finger matrin-type protein 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2Z2_9STRA)

HSP 1 Score: 166 bits (421), Expect = 5.240e-44
Identity = 103/220 (46.82%), Postives = 139/220 (63.18%), Query Frame = 1 
Query:   82 NVEARRTWDRDYYEARAKERIEKGDDFNDNEDTSRLG---NKEEFQPAPSGAAGPAGSARAFLKTREKKVDLTSKLGKTQVVTAASTPSQQGGWYCEVCKCGLKDSINYLDHINGRKHQRALGYSMRVERSTVSQVKDRLKMHKEREEEIISGAARKPSAEDEFESRVRESEDAESRXXXXXXXXXXXXXXXXXXXXDIDFE-----DPEMAALMGFGGF 717
            NVE RRTWD +++E  AKER+EK  + + + +  + G    +EEFQ A +GAAGP GS RA+LK RE  + L  K+GK QVVT +S P QQGG++C++C+C LKDS+ YLDHING+KHQ+ALGYSMRVER  V +VK+RL   K RE+E      R+ SA D ++ ++ + E  +++                    +   E     DPEMAALMGFGGF
Sbjct:   17 NVE-RRTWDLEHFEKIAKERLEK--EASGDVEKKKPGFVRKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRREDEKKKAGPRE-SAIDAYQKKLEKDEAIKAQWKEARKEARINVIQRATKEEESTVEEEGGVDPEMAALMGFGGF 232
[Close]
BLAST of mRNA_F-serratus_M_contig649.17444.1 vs. uniprot
Match: A0A7S2WR40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WR40_9STRA)

HSP 1 Score: 163 bits (412), Expect = 8.400e-43
Identity = 115/215 (53.49%), Postives = 151/215 (70.23%), Query Frame = 1 
Query:   94 RRTWDRDYYEARAKERI--EKGDDFNDNEDTSRLGNKEEFQPAPSGAAGPAGSARAFLKTREKKVDLTSKLGKTQVVTAASTPSQQGGWYCEVCKCGLKDSINYLDHINGRKHQRALGYSMRVERSTVSQVKDRLKMHKEREEEIISGAARKPSAEDEFESRVRESEDAESRXXXXXXXXXXXXXXXXXXXXDIDFEDPEMAALMGFGGFGSSKK 732
            RRTWD   YE +A+ER+  E+G     + D   + +++EF+ A   AAGPAGSARAFL  R + + L    GKTQ++       + GGWYC+VC+C LKDS NYLDHING+KHQR LG+SMRVERSTV QV +R K+ K+R+E+ +S A R P+A + +E R+  +++ E  XXXXXXXXXXXXXXXXXXXX ++  DP++ A MGFGGFG   K
Sbjct:   13 RRTWDVKEYEKKAQERLAREEGGIVEGDVDDRPVRDRDEFRRAEDQAAGPAGSARAFLNNRNRALGLEKAAGKTQIIADNGLRQKGGGWYCDVCECLLKDSSNYLDHINGKKHQRKLGFSMRVERSTVGQVSERFKLAKKRKEDEMSVATR-PTAIEAYEQRIAAAQE-EEXXXXXXXXXXXXXXXXXXXXXXMEGMDPDLMAAMGFGGFGGGAK 225
[Close]
BLAST of mRNA_F-serratus_M_contig649.17444.1 vs. uniprot
Match: A0A1Z5KJY6_FISSO (U4/U6.U5 tri-snRNP component SNU23 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJY6_FISSO)

HSP 1 Score: 164 bits (414), Expect = 1.440e-42
Identity = 128/260 (49.23%), Postives = 162/260 (62.31%), Query Frame = 1 
Query:   49 MSKDLGYKQVKNVEARRTWDRDYYEARAKERIEKGDDFNDNEDTSRLG--------------NKEEFQPAPSGAAGPAGSARAFLKTREKKVDLTSKLGKTQVVTAASTPSQQG-GWYCEVCKCGLKDSINYLDHINGRKHQRALGYSMRVERSTVSQVKDRLKM-------HKEREEEIISGAARKPSAEDEFESRVRESEDA--------ESRXXXXXXXXXXXXXXXXXXXXDIDFE--DPEMAALMGFGGFGSSKK 732
            M+ +L YKQV NV +RR WD + YE RAKER  + ++    E+T + G              NKEEFQ AP  AAGP GS RAFL+ R++ +DL SK+G +++V+A +   + G GW+C+VC C LKDS+ YLDHING+KHQR LG++MRVERST  QV DRLK         KE   + I        ++DE   R RE +          E+  XXXXXXXXXXXXXXXXXX ++DFE  DPEMAA+MGF GFG   K
Sbjct:    9 MASNLNYKQVANV-SRRKWDVESYEQRAKERQAREEEAGYLEETRKKGTDNSTANAKNEDDSNKEEFQAAPPDAAGPEGSKRAFLRARQQAIDLESKVGTSEMVSADNAVVKSGIGWHCKVCDCFLKDSLTYLDHINGKKHQRKLGFTMRVERSTKDQVLDRLKSISQTSKSQKETSLDDIVDLNELVQSKDEALQREREEKXXXXXXXXAMENMRXXXXXXXXXXXXXXXXXXEEVDFEGIDPEMAAMMGFSGFGGGNK 267
[Close]
BLAST of mRNA_F-serratus_M_contig649.17444.1 vs. uniprot
Match: A0A3R7GK79_9STRA (U1-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GK79_9STRA)

HSP 1 Score: 161 bits (407), Expect = 7.030e-42
Identity = 113/238 (47.48%), Postives = 148/238 (62.18%), Query Frame = 1 
Query:   76 VKNVEARRTWDRDYYEARAKERIEKGDDFNDNEDTSRL--GNKEEFQPAPSGAAGPAGSARAFLKTREKKVDLTSKLGKTQVVTAASTPSQQGGWYCEVCKCGLKDSINYLDHINGRKHQRALGYSMRVERSTVSQVKDRLKMHKEREEEIISGAARKPSAEDEFESRVRESEDAESRXXXXXXXXXXXXXXXXXXXXDIDFE-----------------DPEMAALMGFGGFGSSKK 732
            V NV AR+TWDR++YE  AK R E      + E+T ++   +KEEFQ A   AAGPAGSARAFLK R  K+ L + +G  +VV +    S+ GG+YCEVC+CGLKDS+ YLDHING+KH R LGYSMRVERSTV QVK RL+   +R+ + +    +K     ++E +V+E+E+ E+R     XXXXXXXX       ++  E                 D EM ++MGFGGFG SKK
Sbjct:   13 VANV-ARQTWDREHYEKLAKLRAE---GQLEQEETKKVIKSSKEEFQAADDRAAGPAGSARAFLKARTSKMSLENSVGTVKVVKSDDL-SKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKSRLQSASKRKWDPLM--TKKLDTMADYEKKVKEAEEEEARIKRQKXXXXXXXXLGDQQTSEVKSEKATDKKPEAEDEAVPDADTEMMSMMGFGGFGGSKK 243
[Close]
BLAST of mRNA_F-serratus_M_contig649.17444.1 vs. uniprot
Match: W2PLF3_PHYPN (U1-type domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PLF3_PHYPN)

HSP 1 Score: 155 bits (392), Expect = 8.780e-40
Identity = 123/240 (51.25%), Postives = 157/240 (65.42%), Query Frame = 1 
Query:   76 VKNVEARRTWDRDYYEA----RAKERIEKGDDFNDNEDTSRL--GNKEEFQPAPSGAAGPAGSARAFLKTREKKVDLTSKLGKTQVVTAASTPSQQGGWYCEVCKCGLKDSINYLDHINGRKHQRALGYSMRVERSTVSQVKDRLKMHKEREEEIISGAARKPSAEDEFESRVRESEDAESRXXXXXXXXXXXXXXXXXXXX-----DIDFE----------DPEMAALMGFGGFGSSKK 732
            V NV  R+TWDR +YE     RA+ ++EK       E+T ++    KEEFQ A  GAAGPAGSARAFLK R  K+ L S +G  +VV +    S+ GG+YCEVC+CGLKDS+ YLDHING+KH R LGYSMRVERSTV QVK+RL+   +R+ + +   A+K  A +++E +++ +E+    XXXXXXXXXXXXXXXXX        D D +          D EM A+MGFGGFG SKK
Sbjct:   13 VANV-TRQTWDRAHYEKLAQLRAEGKLEK-------EETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVKSDDV-SKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKRKWDPLM--AKKLDAMEDYEKKLKAAEEEXXXXXXXXXXXXXXXXXXXXALEQDKSDDADKKPEAADEALDADAEMMAMMGFGGFGGSKK 241
[Close]
BLAST of mRNA_F-serratus_M_contig649.17444.1 vs. uniprot
Match: A0A0P1ATE8_PLAHL (Zinc finger matrin-type protein 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATE8_PLAHL)

HSP 1 Score: 157 bits (396), Expect = 9.040e-40
Identity = 105/232 (45.26%), Postives = 138/232 (59.48%), Query Frame = 1 
Query:   76 VKNVEARRTWDRDYYEARAKERIEKGDDFNDNEDTSRL--GNKEEFQPAPSGAAGPAGSARAFLKTREKKVDLTSKLGKTQVVTAASTPSQQGGWYCEVCKCGLKDSINYLDHINGRKHQRALGYSMRVERSTVSQVKDRLKMHKEREEEIISGAARKPSAEDEFESRVRESEDAE----------SRXXXXXXXXXXXXXXXXXXXXDIDFE-DPEMAALMGFGGFGSSKK 732
            V NV  R+TWDR +YE  A+ R E G +    E T ++   +KEEFQ A   AAGPAGSARAFLK R  K+ L + +G  +VV +    S+  G+YCEVC+C LKDS+ YLDHING+KH R LGYSMRVERSTV QVKDRL+   +R+ + +    +K  A +E+E +++ +E+AE           +                    D+  E D EM A+MGFGGFG SKK
Sbjct:   66 VSNV-VRQTWDRAHYEKLAQLRAEGGVE---KETTKKVIHSSKEEFQTADESAAGPAGSARAFLKARTAKMSLETSVGTVKVVKSDEL-SKNSGYYCEVCECSLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKDRLQSAAKRKWDPLM--TKKLDAMEEYEKKLKAAEEAEICLKRQKKEQRKAKKCESEDLSQDRVTAEETVDVVSESDAEMMAMMGFGGFGGSKK 290
[Close]
BLAST of mRNA_F-serratus_M_contig649.17444.1 vs. uniprot
Match: A0A2L2YA52_PARTP (Zinc finger matrin-type protein 2-like protein n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YA52_PARTP)

HSP 1 Score: 152 bits (385), Expect = 2.330e-39
Identity = 109/213 (51.17%), Postives = 135/213 (63.38%), Query Frame = 1 
Query:   94 RRTWDRDYYEARAKERIEKGDDFNDNEDTSRLGNKEEFQPAPSGAAGPAGSARAFLKTREKKVDLTSKLGKTQVVTAASTPSQQGGWYCEVCKCGLKDSINYLDHINGRKHQRALGYSMRVERSTVSQVKDRLKMHKEREEEIISGAARKPSAEDEFESRVRESEDAESRXXXXXXXXXXXXXXXXXXXXDIDFEDPEMAALMGFGGFGSSKK 732
            RR WDR+ YE  A+E++E        ED      K + QP            R FLK R+ +VDL SKLGKT V+T  +  SQ GG+YC VC C +KDSIN+LDHING+KHQR LG SMRVERST+ QVK R++M+K + EE           E +FE R++E +D E +  XXXXXXXXXXXXX     D D+ DP+MAA+MGF GF SSKK
Sbjct:   11 RRKWDREEYEKLAQEKLE--------EDEFDFDWKSDKQPPVR---------REFLKPRDYRVDLESKLGKTTVITKTTPASQTGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKQRMEMNKRKREE--------KQKEYDFEQRLQELKDEEEKLRXXXXXXXXXXXXXATESTD-DYGDPDMAAIMGFSGFCSSKK 197
[Close]
BLAST of mRNA_F-serratus_M_contig649.17444.1 vs. uniprot
Match: A0A8J5JCN4_9STRA (zf-C2H2_jaz domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JCN4_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.800e-39
Identity = 106/245 (43.27%), Postives = 140/245 (57.14%), Query Frame = 1 
Query:   76 VKNVEARRTWDRDYYEA----RAKERIEKGDDFNDNEDTSRL--GNKEEFQPAPSGAAGPAGSARAFLKTREKKVDLTSKLGKTQVVTAASTPSQQGGWYCEVCKCGLKDSINYLDHINGRKHQRALGYSMRVERSTVSQVKDRLKMHKEREEEIISGAARKPSAEDEFESRVR--------------------ESEDAESRXXXXXXXXXXXXXXXXXXXXDIDFEDPEMAALMGFGGFGSSKK 732
            V NV AR+TWDR +YE     RA+ ++EK       E+T +    +KEEFQ A  GAAGPAGSARAFLK R  K+ L + +G  +VV +    S+ GG+YCEVC+CGLKDS+ YLDHING+KH R LGYSMRVERSTV QVK+RL+ ++           +K  A +E E+RV+                    +++DA+ +                    ++   D EM A+MGFGGFG SKK
Sbjct:   16 VANV-ARQTWDRAHYEKLAQLRAEGQLEK-------EETKKAIKSSKEEFQSANEGAAGPAGSARAFLKARTAKMSLETSVGTVKVVKSEDL-SKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQNYE-----------KKLKAAEEEEARVKXXXXXXXXXXXXXXDTLDQDKNDDADKKPEAAD---------------EVPDADAEMMAMMGFGGFGGSKK 225
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig649.17444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKT3_9PHAE3.090e-10380.95U1-type domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835ZCC8_9STRA3.420e-5459.74U1-type domain-containing protein n=1 Tax=Tribonem... [more]
W7U2Z2_9STRA5.240e-4446.82Zinc finger matrin-type protein 2 n=1 Tax=Nannochl... [more]
A0A7S2WR40_9STRA8.400e-4353.49Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5KJY6_FISSO1.440e-4249.23U4/U6.U5 tri-snRNP component SNU23 n=2 Tax=Fistuli... [more]
A0A3R7GK79_9STRA7.030e-4247.48U1-type domain-containing protein n=3 Tax=Phytopht... [more]
W2PLF3_PHYPN8.780e-4051.25U1-type domain-containing protein n=11 Tax=Phytoph... [more]
A0A0P1ATE8_PLAHL9.040e-4045.26Zinc finger matrin-type protein 2 n=1 Tax=Plasmopa... [more]
A0A2L2YA52_PARTP2.330e-3951.17Zinc finger matrin-type protein 2-like protein n=1... [more]
A0A8J5JCN4_9STRA3.800e-3943.27zf-C2H2_jaz domain-containing protein n=1 Tax=Phyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig649contigF-serratus_M_contig649:331098..336408 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score320.9
Seed ortholog evalue5e-85
Seed eggNOG ortholog2880.D8LQ99
Preferred nameSNU23
KEGG koko:K12848
KEGG Pathwayko03040,map03040
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0030532,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0046540,GO:0071704,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.mRNA splicing, via spliceosome
EggNOG OGsKOG4727@1,KOG4727@2759
Ec32 ortholog descriptionConserved C2H2 zinc finger protein
Ec32 orthologEc-26_005600.1
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03041
Exons4
Model size1848
Cds size687
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig649.17444.1prot_F-serratus_M_contig649.17444.1Fucus serratus malepolypeptideF-serratus_M_contig649 332211..336360 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931999.4077926-UTR-F-serratus_M_contig649:331097..3322101622931999.4077926-UTR-F-serratus_M_contig649:331097..332210Fucus serratus maleUTRF-serratus_M_contig649 331098..332210 -
1690964095.7640505-UTR-F-serratus_M_contig649:331097..3322101690964095.7640505-UTR-F-serratus_M_contig649:331097..332210Fucus serratus maleUTRF-serratus_M_contig649 331098..332210 -
1622931999.5112622-UTR-F-serratus_M_contig649:336360..3364081622931999.5112622-UTR-F-serratus_M_contig649:336360..336408Fucus serratus maleUTRF-serratus_M_contig649 336361..336408 -
1690964095.8265111-UTR-F-serratus_M_contig649:336360..3364081690964095.8265111-UTR-F-serratus_M_contig649:336360..336408Fucus serratus maleUTRF-serratus_M_contig649 336361..336408 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931999.4242713-CDS-F-serratus_M_contig649:332210..3323571622931999.4242713-CDS-F-serratus_M_contig649:332210..332357Fucus serratus maleCDSF-serratus_M_contig649 332211..332357 -
1690964095.775399-CDS-F-serratus_M_contig649:332210..3323571690964095.775399-CDS-F-serratus_M_contig649:332210..332357Fucus serratus maleCDSF-serratus_M_contig649 332211..332357 -
1622931999.4371018-CDS-F-serratus_M_contig649:332992..3331031622931999.4371018-CDS-F-serratus_M_contig649:332992..333103Fucus serratus maleCDSF-serratus_M_contig649 332993..333103 -
1690964095.7872856-CDS-F-serratus_M_contig649:332992..3331031690964095.7872856-CDS-F-serratus_M_contig649:332992..333103Fucus serratus maleCDSF-serratus_M_contig649 332993..333103 -
1622931999.4643126-CDS-F-serratus_M_contig649:335184..3353971622931999.4643126-CDS-F-serratus_M_contig649:335184..335397Fucus serratus maleCDSF-serratus_M_contig649 335185..335397 -
1690964095.8053124-CDS-F-serratus_M_contig649:335184..3353971690964095.8053124-CDS-F-serratus_M_contig649:335184..335397Fucus serratus maleCDSF-serratus_M_contig649 335185..335397 -
1622931999.483769-CDS-F-serratus_M_contig649:336144..3363601622931999.483769-CDS-F-serratus_M_contig649:336144..336360Fucus serratus maleCDSF-serratus_M_contig649 336145..336360 -
1690964095.816929-CDS-F-serratus_M_contig649:336144..3363601690964095.816929-CDS-F-serratus_M_contig649:336144..336360Fucus serratus maleCDSF-serratus_M_contig649 336145..336360 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig649.17444.1

>prot_F-serratus_M_contig649.17444.1 ID=prot_F-serratus_M_contig649.17444.1|Name=mRNA_F-serratus_M_contig649.17444.1|organism=Fucus serratus male|type=polypeptide|length=229bp
MSKDLGYKQVKNVEARRTWDRDYYEARAKERIEKGDDFNDNEDTSRLGNK
EEFQPAPSGAAGPAGSARAFLKTREKKVDLTSKLGKTQVVTAASTPSQQG
GWYCEVCKCGLKDSINYLDHINGRKHQRALGYSMRVERSTVSQVKDRLKM
HKEREEEIISGAARKPSAEDEFESRVRESEDAESRRKRQKKEAKRMAKKK
QQDEEDIDFEDPEMAALMGFGGFGSSKK*
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mRNA from alignment at F-serratus_M_contig649:331098..336408-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig649.17444.1 ID=mRNA_F-serratus_M_contig649.17444.1|Name=mRNA_F-serratus_M_contig649.17444.1|organism=Fucus serratus male|type=mRNA|length=5311bp|location=Sequence derived from alignment at F-serratus_M_contig649:331098..336408- (Fucus serratus male)
GGCTTGTTGAGGTTCAACGCGTTAATATCCCGTGGCAACAACGAGGCGAT
GTCAAAAGACTTGGGATACAAGCAGGTGAAGAACGTAGAGGCCAGGCGAA
CATGGGATCGTGACTACTACGAAGCCAGAGCGAAGGAACGCATCGAGAAA
GGGGATGACTTCAATGACAACGAGGACACATCGCGCCTTGGCAACAAGGA
GGAATTCCAGCCTGCCCCCTCTGGAGCGGCAGGGCCGGCCGGCTCTGCGC
GTGCCTTCCTCAAGGTACGACAGATCCACAGTTGTATCATATTGCTGAAG
GTTTGACCGATCCAAATTTGCTTACTTAGTTTTGTTTTTGTATTCTATAC
CAGTTGCTGCTACTCCCAAACTTGGGGGGGAAATGTGAGGGCAGCCTTCC
ACTATAAATAGTAGTATAAACTATTAGTACTCCTGTCCTTTGTACTTCAG
TTGTACCTTCTAAAGTACGTCGTTGAGTCTGGGTTGCCAGGAACACCCAT
AGGAGTTTTGTATAGTGAAACATACCACGGTATAGCAATAGTGCACAGTG
TCAACCAGGTAAGATTGCCAATCCTCCTCGTGGTCAGCTGAACAGGCAAA
ATGAATATTTCTCCGTCCGCGTTCGTGCCTGAGAATTTGGTCTCGCGAGA
CGGGTTCGACTGTCCCGTCCCGCGTCAGCCTGCTCATTTCCATACTCGAA
CTGAATCTTGTGCTTACTTACGGGATTCCTCCCGAGTTTATCGGGTCAAG
CATTTGCGTACCGATGGCGTTCACTGCCGAGAGTCCGCCAGCACAGGGCC
AGTAAACCTCAAGGTAGTTCCAAACGAGTGCTACCTTGGCAGGTCACCAT
GGACCAATTAATATGCGCCCCTCTTTCCCACACCCAGCAGTATTTACGAG
AAAACAAGAAGTTTTCAGGCATTGCGATCATGTTGCCCCCGGACGATCAC
CCCCCATCCCCACCTCCCCCCTCCCCAATCCCTGCCTGGTACTACGACAT
CTGTCCGCAAGACCCGAGAGAAAAAGGTGGACCTGACTTCCAAGCTGGGA
AAGACGCAGGTGGTTACTGCGGCGTCTACTCCGTCCCAGCAGGGGGGCTG
GTACTGTGAGGTCTGCAAGTGTGGACTGAAGGACAGCATCAATTACCTCG
ACCACATCAACGGGAGGAAGCATCAGAGGGCGCTGGGGTATAGCATGCGC
GTCGAGCGATCCACGGTCTCGCAGGTTAGGGAGAGGGAGAGAGAAGTTTT
TGCAAGTAGTACAAGCGGCAGCAGCAGCAGCAGCAGCCTCTGCAACACTG
AAGACATGGGAGTAACATTCTCTCGTGGGGACAATATGTTGTACAATACC
AGGTATTATTAGTTTCGAGCTGCAGTACTGTAGTAGCGTGGAATAGGGCT
ATTAGACTATAAATAGACCGTTTCTTATGCGGGCGTTTTCCGAGGAAAGG
AGAAAAAATCCATTTCTTACGCTGGCGGAAATAGGCAATTTCCGATCAGA
GATTTTCGCCCAGCAATTTTCGCCGAGAATTGGGGCGGAAATTGTTTGAG
ACTGATTGCACCGCACAAACCACACAATACAGTATTTATGTATGTATGGT
CATCAAATTTAGCAAGAGTATGGATCAACCGGGCAAGGTTGCCAAACCTG
CTCGTGGTCAGCTGAACAGGGAAAATGGATATTTCCCTGTTCCTGTTCGT
GCATGAAAATTTCGTCTTGCGAGACGGGTTCGGCTGTCCCGTCCCGCGTC
AATATAGAATTGGCTGTTGATCAGAACGAAGGTAGATGAATGACACAAAA
ATGCAGTAGTTTCTGGGTTTGACTGTTGTTTTGTACGAAGCACAGACACA
TACCACCCATGCGCTCTATGGATCAAGCAGCGACCTTTCTGATGTTGCAC
TACTGGTGTTCGATACCACATAATATTATAGTATTGGCTGTGGATCCAAA
CGAAGGTAGATGAATGACACAAAAATACAGCAGTTTCTTGGTTTGGCTGT
TGTTGTGTACGAAGCACAGACACATCGCCCATGCGCTTTATGGATGATCA
GATAGGGAGGGACCTTTCTGATGTTGTACTACTGCTGGTGTGTGATACCA
CACAAACAAGTACAGATTTAGGAAATACAGGCTCAATGACACCAACATCG
TTAAATGGTGTCGTTATTTTTTTCCATCAGCGGATAAGCGTCGACGTGAG
ATTAAACTATCGTGCGTTGAATATTTGTTTGCTGAGTGGTATGTTGTGTG
TACGCGGTCTCGCAGGTGTACGCTGTCGTTCGGTGTGGGCAAAGTGGTAA
CGCCAGCGTTCCTATGGACGCGCCATCTTTTTAAAAACTGTTAACAGTCC
TTTGAGCACACGCCTTCGACTGTCCCAAAACTCCAACGAATTGTTTTGGC
CAGCGTAAGACCTGCGGAACGAAAATTTCCAACGGAAAAATGCTAGAGCG
GAAATAGGTAATTGTAATTTCCGCTCCGAAAAAATGCCAGCATAAGAAAC
GGCCTCAATACCAGAACTACATTGTTATTGGATGGTGTTGGTTGTGGTAT
GTACTATTGTGGTATGTACTATAATACTTCGTTACAATGTTTTTGTTCGT
TCGATTTTTTTTTGTTTCCCTGCATGACGATTAATATAAGTGTAGGTACA
GTATAACGGTGGGCTTCTCCCCGATATTATACTGTTGACCCAATGTTACC
ACCATCGGGGTCCCCGTTTAAATACCATGAAGAGGTTTTGTATTTGCAGC
CTATGATACCACCTAAACGTTTTGACATTTCCCCCCCCTGACTGGGGGAT
GCTCAGAAGGTCTAGGCGCGTTCTATTTTTTCTAAACAAAATTACCAGTA
TTACGTGAAACATTTCAAGCACGAGCCGTTAAATGTTTCCCCCAGAAGGG
GTCTGGTTCTCCAGATTGGCCTGAGTTCGGATAAACAACAACCACTATGA
CCATTGGTCTACCTCGTCTACAGACAATATATACTGGATATTGAGTAGCT
CTACTCATGTTTGCTGGTGGATCGCGGGGGATTTTATCGGTTCGAGTTCG
AGATTATGCGGTGAAGTTTTTTCTCGTCCAGTTGATGTTCTCGAAGCATT
CCCTGGCAGCAAAAACCAGGGGTAGGTAGGTAAGTGCAAGATGTTCTAGG
GCTTTTCTACCAAGAAGCTGTTCCAACTGGGTCTAATTTTCTCCGCGAGT
AGTATTTTGAAACACTATCAGTACCAAGATGAGTACAACTATTAATACAC
AAGTGTCGGAACTGTATATACATACATCAAGTGTTCTCATCTCGCGCGGC
GATAGGTGAAAGATCGCCTCAAGATGCACAAGGAAAGGGAAGAGGAGATC
ATTTCCGGTGCCGCACGAAAACCGTCCGCCGAGGACGAGTTCGAATCTAG
AGTACGGGAGTCGGAGGTGAGAGGCTACCTGTAAGGGGGGGCGACGATAG
CCTCCCCCCCCCATGCCAGGGACGATTTCAAAATCGATCCCGCGCCTTTT
CTCCCTAATTTTTTTTTGCTTGCTGATCCGACCTGATCACGTAAATTGTT
TTGTAAATGCAAGTCTATCATGCCTTTTAAAAATAATTTGGTCGCCTGTA
ACGGTAAAGGTTCTCCGTTTTCTCGGTCATGGCAATCGACGGTTTGGGGG
GGGGGGCTATCGTAGAAACACTCGCCAAAGCATACCCTCCGGTTCGGGTC
CGGGACTCTTCATAGCAGAGGAAATACATGTGTCAAGAGGTGTTTGCAAT
ATATCCCTTGCAAACTGCAATGCTGCTGGGACGCGGGAGGCGCGTTCGCA
CATGTAAAGGAAAACTAATCATAAGCGCTTGAGGTGCGTCGAGACTCTAA
ATACCTCTCAGATGGATGAACTCCTGGGTGCCGCTCCCTCATTCCATTAC
ATACCATCCCATATTCCATTGCGTCCATTCTGCCTACAAGTACCTTATGT
ATTTGTGTATGTCTTCCTCCTGTCCCCTATCCCCCCCCCCCTCCTTATCT
CGGCCTCGTTCCGGGTTTGCAAATTGTGTGACTTCTGTTATGGTGTCGAA
GGACGCCGAATCGCGACGAAAGCGGCAAAAGAAAGAGGCAAAACGGATGG
CGAAGAAGAAGCAACAAGATGAGGAAGATATCGATTTCGAGGACCCGGAG
ATGGCGGCGTTGATGGGGTTCGGCGGCTTCGGGAGCAGCAAAAAGTAGTA
TCGAATAGCTAGAGTCATACCTCTTACCTCTTACTCATCATGTGTGTTGC
AATGGCATATGTTCGTATTAATAGTCTTGGTAGCTTTTGTTGTAGTCAGC
AAGTGGTCTAGTAGGTAACCTGCACACCTGCTAGTGCGGAAGTCGTGAGT
TCGATTCTTACCAAAGTAGGATTTGTGTTCTTTCTTCCGTAACGGAAAGC
GTGGGAACGCGAGCAACTAAAATGCAACCATTAGTTGACGAGTTGTAAGA
TCGCTGAACTTGCATTAAGGCGTGAACCGGGGAGAGATGGAAAGATCCTT
TGCGACCACAGGCAGGATGGTAATGATGAGTTCCATCGGCTACTTCCCGA
GGAAGTGATAGACCAAAGACACGTTTACGCTGGGGAGCCTGATTGCGGCG
GTCAAGATGGTTGACAGGGCTGCTGCTAGCTGCTACACGCGCACTGCACG
AGAAAAAAACAAGGCAAACTTAGCGCCCACCTCGCTTACCTGCTGGACGA
GCTCCCCACCCCCACACTTGTTTTGTGCGCCTATACCCCAACGATGATGA
CGCTAGTCGTAATGGGGATGAGGAAACGATAATCCGCCTTGGGCTGATAC
ACTAGATTACCAATCTTCTGCCCAGTGAAAGCATCGACGTTAAGATACTC
GCAGGAACTGGAACGCGGACGGCGCTATTATAGCTTAATAAGTTTGAAGT
ATTTGGAGATCTGGCGGGGTGTGCGAGGCGAAATCCTGTCCAAACACGGC
CTGGGCAGGTCTTCGGAAGGTTTTGCGAACAAGAATAAATTTGACGGCAG
CCGACTCGAAGCCTTGACCGAGAGGCGAATGCTTTCCTCGCGAGAGAAAT
AACGGGATGGAGATGCTGCGACGATAAACCGTTCGTTATTTAGTCGTGTT
CTCTAGAACATACGGTCTGATGAATTCCCCGCAGACGATCAGGTTGCTGG
ATGGCGGACCCGCCCGCTACTCAGCATGTGGGATGTTTTGCCCGGGAGTC
ATGGTTGAGCGGAGTAATCTGTAGGTTTCTCTACCGCCTGACTTGATACC
TTTATACTGGTAATGGTAACAATCACGACCTTTGAACGTACCACAAGAAA
AAAACCATTTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig649:331098..336408-

>mRNA_F-serratus_M_contig649.17444.1 ID=mRNA_F-serratus_M_contig649.17444.1|Name=mRNA_F-serratus_M_contig649.17444.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig649:331098..336408- (Fucus serratus male)
ATGTCAAAAGACTTGGGATACAAGCAGGTGAAGAACGTAGAGGCCAGGCG
AACATGGGATCGTGACTACTACGAAGCCAGAGCGAAGGAACGCATCGAGA
AAGGGGATGACTTCAATGACAACGAGGACACATCGCGCCTTGGCAACAAG
GAGGAATTCCAGCCTGCCCCCTCTGGAGCGGCAGGGCCGGCCGGCTCTGC
GCGTGCCTTCCTCAAGATGTCAAAAGACTTGGGATACAAGCAGGTGAAGA
ACGTAGAGGCCAGGCGAACATGGGATCGTGACTACTACGAAGCCAGAGCG
AAGGAACGCATCGAGAAAGGGGATGACTTCAATGACAACGAGGACACATC
GCGCCTTGGCAACAAGGAGGAATTCCAGCCTGCCCCCTCTGGAGCGGCAG
GGCCGGCCGGCTCTGCGCGTGCCTTCCTCAAGACCCGAGAGAAAAAGGTG
GACCTGACTTCCAAGCTGGGAAAGACGCAGGTGGTTACTGCGGCGTCTAC
TCCGTCCCAGCAGGGGGGCTGGTACTGTGAGGTCTGCAAGTGTGGACTGA
AGGACAGCATCAATTACCTCGACCACATCAACGGGAGGAAGCATCAGAGG
GCGCTGGGGTATAGCATGCGCGTCGAGCGATCCACGGTCTCGCAGACCCG
AGAGAAAAAGGTGGACCTGACTTCCAAGCTGGGAAAGACGCAGGTGGTTA
CTGCGGCGTCTACTCCGTCCCAGCAGGGGGGCTGGTACTGTGAGGTCTGC
AAGTGTGGACTGAAGGACAGCATCAATTACCTCGACCACATCAACGGGAG
GAAGCATCAGAGGGCGCTGGGGTATAGCATGCGCGTCGAGCGATCCACGG
TCTCGCAGGTGAAAGATCGCCTCAAGATGCACAAGGAAAGGGAAGAGGAG
ATCATTTCCGGTGCCGCACGAAAACCGTCCGCCGAGGACGAGTTCGAATC
TAGAGTACGGGAGTCGGAGGTGAAAGATCGCCTCAAGATGCACAAGGAAA
GGGAAGAGGAGATCATTTCCGGTGCCGCACGAAAACCGTCCGCCGAGGAC
GAGTTCGAATCTAGAGTACGGGAGTCGGAGGACGCCGAATCGCGACGAAA
GCGGCAAAAGAAAGAGGCAAAACGGATGGCGAAGAAGAAGCAACAAGATG
AGGAAGATATCGATTTCGAGGACCCGGAGATGGCGGCGTTGATGGGGTTC
GGCGGCTTCGGGAGCAGCAAAAAGTAGGACGCCGAATCGCGACGAAAGCG
GCAAAAGAAAGAGGCAAAACGGATGGCGAAGAAGAAGCAACAAGATGAGG
AAGATATCGATTTCGAGGACCCGGAGATGGCGGCGTTGATGGGGTTCGGC
GGCTTCGGGAGCAGCAAAAAGTAG
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