|
|
Homology
BLAST of mRNA_F-serratus_M_contig64.17314.1 vs. uniprot
Match: A0A6H5L5I3_9PHAE (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5I3_9PHAE) HSP 1 Score: 235 bits (599), Expect = 2.440e-77 Identity = 123/132 (93.18%), Postives = 128/132 (96.97%), Query Frame = 1
Query: 1 MAEDA-GDTEELREQDRFLPIANISRIMKKSLPENAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVEPLKVYLAKYRESVKLEKPDRKGKRDDGSEAMATGG-YYGA 390
MAE+A DTEELREQDRFLPIANISRIMKKSLP+NAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYV+PLK+YL+KYRESVKLEKPDRKGKRDD SEAMATGG YYGA
Sbjct: 1 MAEEAIVDTEELREQDRFLPIANISRIMKKSLPDNAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVDPLKIYLSKYRESVKLEKPDRKGKRDDASEAMATGGGYYGA 132
BLAST of mRNA_F-serratus_M_contig64.17314.1 vs. uniprot
Match: A0A7S1U555_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U555_9STRA) HSP 1 Score: 197 bits (502), Expect = 1.040e-62 Identity = 103/128 (80.47%), Postives = 115/128 (89.84%), Query Frame = 1
Query: 1 MAEDAGDT-EELREQDRFLPIANISRIMKKSLPENAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVEPLKVYLAKYRESVKLEKPDRKGKRDDGSEAMATGGY 381
MAED GD E+REQDRFLPIANI+RIMK+SLP+NAKIAKDAKE VQECVSEFI FI+SEASDKC+QEKRKTING+DL+WAMSTLGFD YVEPLK+YL+KYRESVK EKP K + DGSEA+ATGGY
Sbjct: 1 MAEDHGDDMAEIREQDRFLPIANIARIMKRSLPDNAKIAKDAKECVQECVSEFISFISSEASDKCQQEKRKTINGDDLIWAMSTLGFDNYVEPLKLYLSKYRESVKGEKPGPKMRGADGSEAIATGGY 128
BLAST of mRNA_F-serratus_M_contig64.17314.1 vs. uniprot
Match: A0A835YU51_9STRA (Nuclear transcription factor Y subunit B4 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU51_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.690e-61 Identity = 98/107 (91.59%), Postives = 104/107 (97.20%), Query Frame = 1
Query: 16 GDTEELREQDRFLPIANISRIMKKSLPENAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVEPLKVYLAKYRESVKLEKPDRK 336
GD EELREQDRFLPIANISRIMKKSLP+ AKIAKDAKETVQECVSEFICFITSEASDKC+QEKRKTINGED+LWAMSTLGFDKYVEPLK+YLAKYRESVK EKP++K
Sbjct: 8 GDAEELREQDRFLPIANISRIMKKSLPDAAKIAKDAKETVQECVSEFICFITSEASDKCQQEKRKTINGEDILWAMSTLGFDKYVEPLKLYLAKYRESVKGEKPEKK 114
BLAST of mRNA_F-serratus_M_contig64.17314.1 vs. uniprot
Match: A0A6U3SNW2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SNW2_9STRA) HSP 1 Score: 188 bits (477), Expect = 2.410e-58 Identity = 92/112 (82.14%), Postives = 107/112 (95.54%), Query Frame = 1
Query: 16 GDTEELREQDRFLPIANISRIMKKSLPENAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVEPLKVYLAKYRESVKLEKPDRKGKRDD 351
G +E+REQDRFLPIAN+SRIMK+SLP+NAKIAKDAKETVQECVSEFI FITSEASDKC+QEKRKTING+DLLWAM+TLGFDKY++PLKVYL+KYRES+K EKP++K KRD+
Sbjct: 14 GPDDEMREQDRFLPIANVSRIMKRSLPQNAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMNTLGFDKYMDPLKVYLSKYRESIKGEKPEKKLKRDN 125
BLAST of mRNA_F-serratus_M_contig64.17314.1 vs. uniprot
Match: A0A6U1F424_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U1F424_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.680e-57 Identity = 91/106 (85.85%), Postives = 101/106 (95.28%), Query Frame = 1
Query: 19 DTEELREQDRFLPIANISRIMKKSLPENAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVEPLKVYLAKYRESVKLEKPDRK 336
D EE+REQDRFLPIANI+RIMK +LPENAKIAKD+KET+QECVSEFI FITSEASDKC QEKRKTING+DLLWAMSTLGFDKYVEPLK+YLAKYRE+V+ EKPD+K
Sbjct: 11 DYEEIREQDRFLPIANIARIMKLTLPENAKIAKDSKETLQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKIYLAKYREAVRGEKPDKK 116
BLAST of mRNA_F-serratus_M_contig64.17314.1 vs. uniprot
Match: A0A7S0GKV9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKV9_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.330e-56 Identity = 93/118 (78.81%), Postives = 105/118 (88.98%), Query Frame = 1
Query: 25 EELREQDRFLPIANISRIMKKSLPENAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVEPLKVYLAKYRESVKLEKPDRKGKRDDGSEAMATGG 378
EE+REQDR+LPIANI+RIMK +LPENAKIAKD+KETVQECVSEFI FITSEASDKC QEKRKTING+DLLWAMSTLGFDKYVEPLK+YL KYRE+V+ +KPD KG G+ AM+ G
Sbjct: 45 EEIREQDRYLPIANIARIMKNTLPENAKIAKDSKETVQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLGKYREAVRGDKPDNKG---GGASAMSNAG 159
BLAST of mRNA_F-serratus_M_contig64.17314.1 vs. uniprot
Match: A0A1E7FRM2_9STRA (Histone-fold-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRM2_9STRA) HSP 1 Score: 179 bits (454), Expect = 4.690e-55 Identity = 88/105 (83.81%), Postives = 100/105 (95.24%), Query Frame = 1
Query: 19 DTEELREQDRFLPIANISRIMKKSLPENAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVEPLKVYLAKYRESVKLEKPDR 333
D EE+REQDR+LPIANI+RIMK +LPENAKIAKD+KETVQECVSEFI FITSEASDKC QEKRKTING+DLLWAMSTLGFDKYVEPLK+YL+KYRE+V+ +KPD+
Sbjct: 21 DYEEIREQDRYLPIANIARIMKNTLPENAKIAKDSKETVQECVSEFISFITSEASDKCLQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLSKYREAVRGDKPDK 125
BLAST of mRNA_F-serratus_M_contig64.17314.1 vs. uniprot
Match: A0A7S2U8L2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8L2_9STRA) HSP 1 Score: 179 bits (454), Expect = 7.530e-55 Identity = 88/105 (83.81%), Postives = 100/105 (95.24%), Query Frame = 1
Query: 19 DTEELREQDRFLPIANISRIMKKSLPENAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVEPLKVYLAKYRESVKLEKPDR 333
D EE+REQDR+LPIANI+RIMK +LPENAKIAKD+KETVQECVSEFI FITSEAS+KC QEKRKTING+DLLWAMSTLGFDKYVEPLK+YLAKYRE+V+ +KPD+
Sbjct: 45 DYEEIREQDRYLPIANIARIMKNTLPENAKIAKDSKETVQECVSEFISFITSEASEKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLAKYREAVRGDKPDK 149
BLAST of mRNA_F-serratus_M_contig64.17314.1 vs. uniprot
Match: A0A7S2EHZ1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EHZ1_TRICV) HSP 1 Score: 177 bits (448), Expect = 1.840e-54 Identity = 86/103 (83.50%), Postives = 99/103 (96.12%), Query Frame = 1
Query: 25 EELREQDRFLPIANISRIMKKSLPENAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVEPLKVYLAKYRESVKLEKPDR 333
EE+REQDR+LPIANI+RIMK +LP+NAKIAKD+KETVQECVSEFI FITSEASDKC QEKRKTING+DLLWAMSTLGFDKYVEPLK+YLAKYRE+V+ +KP++
Sbjct: 19 EEIREQDRYLPIANIARIMKNTLPDNAKIAKDSKETVQECVSEFISFITSEASDKCMQEKRKTINGDDLLWAMSTLGFDKYVEPLKLYLAKYREAVRGDKPEK 121
BLAST of mRNA_F-serratus_M_contig64.17314.1 vs. uniprot
Match: A0A4D9DEI5_9STRA (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEI5_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.150e-54 Identity = 97/124 (78.23%), Postives = 102/124 (82.26%), Query Frame = 1
Query: 25 EELREQDRFLPIANISRIMKKSLPENAKIAKDAKETVQECVSEFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVEPLKVYLAKYRESVK-LEKPDRKGKRDDGSEAMATGGYYGAP 393
EE+REQDR+LPIANISRIMKKSLP NAKIAKDAKETVQECVSEFI FITSEASDKC+QEKRKTING+DLLWAMSTLGFDKYVEPLK YL KYRESVK EK D GK+ TG P
Sbjct: 19 EEVREQDRYLPIANISRIMKKSLPANAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMSTLGFDKYVEPLKHYLVKYRESVKGAEKADG-GKKGKSEGTQVTGSSAAGP 141
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 239.2 |
| Seed ortholog evalue | 1.2e-60 |
| Seed eggNOG ortholog | 2880.D8LI33 |
| Preferred name | NFYB |
| KEGG rclass | RC00010,RC01783,RC03043 |
| KEGG ko | ko:K08065,ko:K08681,ko:K14799 |
| KEGG Reaction | R07456 |
| KEGG Pathway | ko00750,ko04612,ko05152,ko05166,map00750,map04612,map05152,map05166 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000976,GO:0000981,GO:0001067,GO:0001558,GO:0001654,GO:0001932,GO:0001934,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003712,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005737,GO:0006082,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006790,GO:0006807,GO:0007275,GO:0007399,GO:0007423,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009416,GO:0009628,GO:0009648,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010228,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010720,GO:0010941,GO:0016070,GO:0016143,GO:0016602,GO:0018130,GO:0019216,GO:0019218,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019748,GO:0019757,GO:0019760,GO:0022008,GO:0022414,GO:0022603,GO:0022604,GO:0023051,GO:0023056,GO:0030154,GO:0030307,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0032993,GO:0034097,GO:0034641,GO:0034645,GO:0034654,GO:0040008,GO:0042221,GO:0042325,GO:0042327,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043408,GO:0043410,GO:0043436,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044798,GO:0044877,GO:0045540,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045676,GO:0045678,GO:0045893,GO:0045927,GO:0045935,GO:0045937,GO:0046483,GO:0046532,GO:0046534,GO:0046890,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048571,GO:0048573,GO:0048574,GO:0048579,GO:0048580,GO:0048581,GO:0048583,GO:0048584,GO:0048585,GO:0048586,GO:0048608,GO:0048638,GO:0048639,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0050896,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051510,GO:0051512,GO:0051716,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060548,GO:0061458,GO:0062012,GO:0065007,GO:0070013,GO:0070491,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0080090,GO:0090181,GO:0090304,GO:0090575,GO:0097159,GO:0097659,GO:0106118,GO:0140110,GO:1901135,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901657,GO:1902531,GO:1902533,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:1990823,GO:1990830,GO:1990837,GO:2000026,GO:2000027,GO:2000028,GO:2000112,GO:2000241,GO:2000242,GO:2001141 |
| EggNOG free text desc. | protein heterodimerization activity |
| EggNOG OGs | COG2036@1,KOG0869@2759 |
| Ec32 ortholog description | Histone-like transcription factor, NF-YB subunit |
| Ec32 ortholog | Ec-04_003050.1 |
| EC | 4.3.3.6 |
| COG Functional cat. | B |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03000,ko03009 |
| Exons | 2 |
| Model size | 441 |
| Cds size | 441 |
| Stop | 1 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622931977.2745755-CDS-F-serratus_M_contig64:356526..356829 | 1622931977.2745755-CDS-F-serratus_M_contig64:356526..356829 | Fucus serratus male | CDS | F-serratus_M_contig64 356527..356829 - |
| 1690964085.5067737-CDS-F-serratus_M_contig64:356526..356829 | 1690964085.5067737-CDS-F-serratus_M_contig64:356526..356829 | Fucus serratus male | CDS | F-serratus_M_contig64 356527..356829 - |
| 1622931977.2923384-CDS-F-serratus_M_contig64:368350..368488 | 1622931977.2923384-CDS-F-serratus_M_contig64:368350..368488 | Fucus serratus male | CDS | F-serratus_M_contig64 368351..368488 - |
| 1690964085.523006-CDS-F-serratus_M_contig64:368350..368488 | 1690964085.523006-CDS-F-serratus_M_contig64:368350..368488 | Fucus serratus male | CDS | F-serratus_M_contig64 368351..368488 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig64.17314.1 >prot_F-serratus_M_contig64.17314.1 ID=prot_F-serratus_M_contig64.17314.1|Name=mRNA_F-serratus_M_contig64.17314.1|organism=Fucus serratus male|type=polypeptide|length=147bp
MAEDAGDTEELREQDRFLPIANISRIMKKSLPENAKIAKDAKETVQECVS EFICFITSEASDKCKQEKRKTINGEDLLWAMSTLGFDKYVEPLKVYLAKY RESVKLEKPDRKGKRDDGSEAMATGGYYGAPGGAGGGGAGGMPSGF* back to topmRNA from alignment at F-serratus_M_contig64:356527..368488- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig64.17314.1 ID=mRNA_F-serratus_M_contig64.17314.1|Name=mRNA_F-serratus_M_contig64.17314.1|organism=Fucus serratus male|type=mRNA|length=11962bp|location=Sequence derived from alignment at F-serratus_M_contig64:356527..368488- (Fucus serratus male) ATGGCGGAGGACGCGGGAGACACAGAAGAGCTGCGGGAGCAGGACCGCTT
TCTGCCAATCGCCAACATCTCCCGCATCATGAAGAAGTCTCTGCCGGAGA
ATGCCAAGATTGCCAAGGATGCTAAGGAGACCGTACAGGTAATCCTCTTG
TCCTTCTCTGATGATGATGGTCTAACGGTGTAGCCTTCATTTGGTGTGCG
GGTCCCTCTCCAAATTACAAAAAAGCTAAACCACTTTTTTTTCTCTCTAA
CAATGAGACTCTTGGTACTGTATGGTCATCACCGCTACCTCTATACCCGT
GGTACAAAAGCAAGAGAAGGATCAACCGGCTAAGGTTGCCAATCGTGCTC
GAGGTCAGCCGAACAGGGAAAATAAATATTTCACTGTCCCCGTTCGCGCC
TGAGAATTTGGTCTCGCGAGACGCGTTCGGCAGTCCCGTCCGGCGTCAGC
TTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTCC
TCTCGAGTTCCGCGGCGGTGTCCATTTATTTATAACTGCCATACGCCATC
GGGTCAATCCCGAGTTTTTCGGGTCACGCAATTGCGTACCGATGGCATTC
ACTGCCGAGAGTCCGCCGGCACTGGGCCAGTAGTCCTCAAGGTAGTTCCA
GTAACGGTTGCTAGATACACACCCACGTATAAAGTGGGCATGTTGAAACT
GCGGGCGGGTGCCAGGTACTGACCCACCAGGTTGTTGCTACAGGTCCTCC
TACCCTAAGAGGTACCTGGTACGTATCATCAACCGACGACATTTGTTCGC
TCGGCTTCGGGTTGAATTGCCCCGACTCATACAAGTTTCGGTATCGTCGC
GCCCAGTAGCTCGACTTGTAACCTGCCCGGACATTTGGGCAGTATAATAG
TAAACCTGAGTTCAAATCCACTTGTTTTGTACGTAACATAGAGCGCGAGA
ACGAGTTTTCAAGCATTGGTATCAAGCGCAGTAAACGAGGTTTACGGGTA
CGGACTACCGAAGCATCCCGAAGCCCTACCTGTTGGTCTTTACGGACAAC
AGCCGGGATTGGCAACATTGTCGTCGGTAGGGCTGGCGACCTAGGACGTC
AGATCGGTCCCGTCGTTACATCGGCAGAACGAAGGGACAAAAAAGTGTTT
TCAAAGCTGTCCGTAGAGCTGATAGGTCCATTTTTATTATTATTGTTTAA
TTTGTTGATTCCCACATTCAGCCGTTTGTCCTTGCAACTGGAGGAAACTA
CGACGACACAACAAGTCAACCTATGACACCTATCAAATGCCAATCCCGCT
CGTAGTCGCAAAGAGGTACCAAGGTCAACGAGTCACACGGTACTTTCAAC
ATGCCCACTTCATGCCAATAGTGGGTGTGGGAAAGAGAGGCGCATATTAA
TTGGTCCTTCTGGTGTGCTGTCCATCTACCAAAAGTCATCAAAAGTGGTA
CCAAAATATTTTATCTTACTGCACTCTATACTTGTGGCCAGCTACTGTAT
CGGAGAACTACACGAGAAACAAGTTTTGTGGCACTTAAAAAAGGGTGGTA
TATTTGACAAAAGACGCTGTTGTTCGTACCCCAAGTATCACCACCACCAT
GACGTGATGCGGATACGTATTATGATGGTTCCGTTATTTTCCGGTGGGTC
ATGCCTTAACGAGGATTTTGTCGCGATTTTCGAATCGTTTTTGGTTTGAG
TAGCCAGACCAGGCGCCACCATGACGTGAACAGCCGCAGTACTATTAATA
GGACAATACGCTGAGAGTGCGAATCAAGCAATCAATCGAACCAAACTAAT
CGAACCAATATTATTTGAACCAATCAATCAATCAGTCAAATCAGTAGGGT
TGCGCACCGATACTATATATATCGGGAAGTTGGCGCAGCCGATATGCCGA
TATATCGGGGAAATATCGGCAGCCGGGCGAAGCGAGGCGGCGGAGCCGCG
TTTTTTGCGATAGCAAAAAACGTGGCGGAGCCACGAACGGCCCCCCGGCT
GGTGAGGGGTCCCGCTGAAGGCGAAAAAAAAGACGCCATTTGGCTTCATT
TCCTTTCAAAATCGGGCAAGAATATTGACTACCGAATAGTAGAATAGGGG
TTCCATCGACAGCAACACCGGTATTAATTACTTGTTTGATTAGTTAATTA
GTATTGATCCAAAAATATTAGTTACTTTAGACGATGCCAACAGACGATGA
AATGCTGCCGCGTCTTTCCGTTGACGAAATCACCAACAGGACAGAAGTAG
CAATTAGCAACATACGTGGGCCTCTTCATTAGATTAAATGTACTCTAACG
TTCACATACGGTCCTGCACTTTCAGCAACACCAGCCCCTCGCAGTAGATG
CCAACAGGCAGAAAGAGCAACACACACGGCAACAAATGAAGCTAACGCAA
CAAACAAACTCTCCCTCTAGTTTGCAGCAATCAATTACGCATCACACAGG
GGTCGCCTTCGACTGCTGCCATTCCTCCACCACACTCCAGATGTTCTTCA
ACGCCACCAGAAGCTCGACGTTTTCTGATGACAGGCGGTTGAGTGTCTCG
GTGACAATCTGCCCAGCGCTCGAGAACACGCGCTCCGACTGCGCGATGCC
GGGATGGCCAAAAGGCGCCGCGCAAGCGCCGCCAGCAGCAGGAATTCGAC
GGCGTTTATCCGCCAGCAATCCAGCGGGTCGGGGTAGAGGATCTTGCCGC
TCTCCTGTGCCTCTTCCATCGCCAACCCCCTAGTTGCCCAATACCTTGTG
ACCTCCCTCTCTGCTTCCTTCAGAAAGTGCTCAGTCGGCAGCGACGGCGC
GGCGGTGACCGTGGAAGCCGATGCTGCCTGCGCCTGGGAAGCCGCCATGA
AGCCGCCGCAAAATCGTTTGCTAGCGGGACGGGCAGATGCCCCAGGCCCA
GGTCCGCCTGGCATTGATCCAGCCGCTGGCGTTGATCCAGCCGCTGACAA
TGCCGTTGCCCCGACGGATGCCTGTGTGCTCTTGATGATGTCCGCGGCCG
CCATGGCCACAGCCTGCCACACCGCCTCGTGCTTTCTGGGTAGAACGCCG
TACAGCATCTTGCACCGCGGGTCGAGGGCGTTACAGCTAATCACGTCGAC
GGAACCAGTTGAAGGAACGGTCGTGAGGATTGTGTCAAATTCTCAGAGCC
CCAAAAAATCTTAAATCGCCTAATCCAGCTCAAGGTCTTTGCTGGGTCAT
TTGGCATTTTGGGGGGAGAACGAGTGCTGTAGTAGTGGACTCGTATCAAA
GAATCACTAACACTCGTGCTTACCCCTTGTCCGCCAGGTCCTTGTCTTGC
AGCTGCTGCACTAGTCCCCATTGTGGTTTCCCTTTTCGCCGCCTCCTCCC
TTTCCTGCTGCTTTTTTGCCGCCTCCTCCCTTTCCTCCCTCATTGTTTGG
TTGGATGCTTCTTGAACTCGCAGCCTTGAAGTTGAACGTTCACGCAGCTT
TGCAATCGTCTCCTCAAACTGCGCTTGCATCGCTGCCATTTGGGAATTCC
CATACTCCGTATCTAAAACTCCTTTTACACACACATTCGGGGTTTATGCC
ACCCGCGCCGCAGGACTTAAACACACCTACACGACGGGGTTTATGCCACC
CGTGTTTACCATAGTGACCTCACACAGCAAAGGCACGCCGAAGAGTAGTC
ACATATACAGAACTAAAAGTTCCAGGATTTATCACACCTGCGCTGTGCCT
TACCCACGGCACCTGTTTGCTATACCAACGGCTCGCGAGCCCACACGATA
TCGTGTCTGGATGTTGGGGCGTGCCTTAAAGTTAACACGCGAGCACTTGG
CCGTGGCTTCTTGCACAAGAAGATTGACTCAATTCCTTTACTATTAACGA
GTGAGGAGGTAAGGCTCTGTGGTAGCCTACAGAGCTCTTTTCCCCAGTTC
CCTTCATATCACATCATCGAGCATGCCTCCTGCACACCTTACAAATCCCC
AACTCCTGTGAAACATTATATCTACCGAATATCCCAAACACAGCACTGCG
TAGATTGCCACGGAAAACTAGCGGTAACGAGAAGGGGTCTTGTTCGTGGC
CCGCTGCAGCGTTTTTTTTTTATGTTCCAGGGTGGGGTGATTTTTAGCTT
GTAATTTTGTGATTTTATATCACAAAATCATTTCACGTAGCTGCGCCCAA
CATGCTTACGACGAACTAATGCAGTAGTACTACTACTGTCCAACACAACA
AATAAATGAGGCTCCAAACACGCACAAACAAAATGCCACACGTAGACCAT
CCCGTGAGAGCGTGAGAGCCCTTGCAACAACTGCTGCATCGCCGCATGTG
TCTTGTGTGTCGTTTTGTATGTGTGTGTGCTGTGTTGTGTTGGTCTCTCC
TCTGTGGATGCTGCCCCGTTTTTGGTGCGGGGGGTTCCGTGCAAGTAAAT
ACACGGAGGTACCCCTGTCGGTTTACGGGTACCCGGCTAACCTATTCTAC
CAAAAACCCGACCAATACCCGCGGCTTTTGGAGTCATGCCCGAATCCTGC
CGGGATTGGACTGGTTTTCTGGTTTTCGATTGACGGGTCCCAACCCTACA
GCACACAACATACACACTCAACACAGCACCACCACCACCAACAGGGCATC
GCACATCACACATCACACACAGCACACCCGAATGGGTATGTGTTTTACGT
CCTCCTCGGCGTCTGGGGGGAGCTGGAAACAACGCCGCTAGCAATGGGGA
AACACTCCGATATATCGCATATATCGCCTTCGATATATATCGAGGTATCG
GCAAAACCCCTCAGCCGATAGATAGATAATATCGTATCGATCGATGTATC
GGCGGATATCGGTATCGATACACAACCCTACAAATCAGTCATTGTATTAT
TTCAAAGAATTCGCTTCGCCGCTAATCTCCAGTTACTCACAAGCGTGAGA
AAGTGCGTAAATAATATTCAACTATCATATTCAACTATTAATATGAATAT
AATTGATCGATCGGTTGACGAGGTGTAAAGATTGCTGAACTTACATCGCG
ATAAAAATTCGTAGGCGAGATCCGGGGAGACATGGAAAGGTCCTTAGTGA
CCACCACACAGGCAGGAGGAGATGGCAACGTTGCAGTGCGTGGGATTGGT
AACCTATTAATAGCACGTTGGTTCTTTATTTGCTTCCTCTTTGGTCGCCC
CACAGACTACTTACTGCCTGTGCAGTGGTGCAGGTGCAACCCACACAGCT
CCTACTGTACTGCAGACACCCAGTTATCTTTCTTTCCCTTGAGAGACAAC
AGTTGACTTTGCAGCCTAAGGTCCCACCTAAACGTTTTGACATTTTCCCC
CCTGACTGAGGGATGCTCAGAAGGTCCAAATGCGTTCAGATTAATAAACC
TTATAAGCCATCTTGTATCTTGTATAGGCTGAGAAATGAGAAGTCGAGGT
GAGGCCTATTGTTTTGCTTGTTGTTTGTTGTCATCCCAAATAGGTCTGAA
ATCGACCATTTTTTAACGAGCCCACCGTAAAAGAGAGCCCCCCCCCCCCC
CCCCCATTTCCCAGCGATTCCCCACCTGGAATCGGGCGCTCAAATATGAA
CCTTGTGGAGCTGGTGAAGTGAAGCCTTTACAGAGATAGGCATGTAAAGG
TTTCAAAGCCCTCGGACCCAGGGTCGCATGCAATACTGGGGCATGTAGGC
AAGAAGCAATGCTTCAGCAGAGTAGAGAGTGCTACAGTGTTACCCTGCCA
TGGCTGGCGATTATATCATAGCATGTTGAATAGGAGTACGGGGTTGTTGT
TGTTGTTGTTATTCATGGCATTTAAACGGGTTAGGTTCCCCAATGGTGGC
AACATTGGGTCAACAGTATAATGTCGGGGAGAAACCCCCCGTTATACTGT
ATACTTAGATGAATCGCCATTCAGGGTCACCAGCAAAGCATAGACAAAAG
ACACGATGGGCCTAGATTACACCTCTGTTTGTTACATCTTGTTTCTCAGA
TTCTTCGGCGTATTGGTTGCCAAATCCGAAAAAAACTACTACATACTTTA
CACGGTGGCCAATCTTGCTCGTGGTCTGCTGAACAGGGGAAAATATACTT
GAAATAATATTAAGACTGGCAGCGCCTCCCCCACTCCCCCCCCCGCCCAC
GCTGCTCGTTCGGAGGAAATAAAATAAAAATTACGTAGGACTGCTTGCTT
TTCCTTGTTTTGAAAGGTAATAAAGGTTTTAGTCCAGCAGCAAAGCAACG
CCCGCGCGAGGAACATGATTTTAGCCGATGGGCCTCATTCCATCCTGCCT
GTGGTCACTGAGGATCTCACGTTCTCACGCTTTCCGCTACGGAAGCAAGA
ATTAAAAAATCCTGATTTAGCCAAGAATCGAACTCACGACCTCCGCACTA
TAAATAGCAGGTGTGCAGGCTACCTGCTAGACCACTCAGGCGACGAGGGT
TGCGTGCACTGTAATAGTGTATTGATAGTGTTGTTGGTATTACTATAATA
GTGATGGAGAATACATGAGCCACCTCGCTTTTCGTGTATCGGCTATTATT
AGCATGCTATAGCCACTTCATACCAATAGTGGGTGTGGGAGAAGAGAGGC
GCACATTAATTGGTCCATGGTGACCTGCAAAATGGCAGCACCCGTTACTG
GAACTACTGTACCTTGAGAGCTACTCGCCCTGTGCCGGCGGACTCTCGGC
AGTGAACGCCATTGGTACGCAATTGCGTGACCCGATAAACTCGGTACTGA
CCCGATGGCGCATGGTGGTTTAAATAAATAAATGGACCCCGCCGCGGAAC
TCGGGACAAATCCCGTGAGTAAGCACCAGATTCAGCCTGAGTATGGAGAT
GAGAAGGCTGACCCGGGACGGGACGGCTGAACCCGTATCGCGAGACCAAT
GTCTCAGGCACGTACGGGGATAGGGAATATACTCATTTTCCCCGTTCAGC
TGACCACTATTAGACTAGAGCAGGATTGACATTCTTACCAGGTTGATCCA
TACTCTGCTATATGCGATGGCCGTACATACAGTACAAGTAACTCTACTGA
CTTGTAGGGTTCGCGTCGAAGGGCGGGGTTGGATAGCCTCCCATACAGTA
CTCTCTCTGTATGTATCGCGCATGTAGACTATTAATAACTGTAGTACCAA
TAGTGGTTTGATGCCCAATCAGCTATGAGTGATGACCATACACACACATA
CCAGGTACATCCTTGTGCACGAGGAAGATGTTGTCAATATTCTCCGAAAA
AACGCTGCGTAGTTTTACAAATATTTGGTACAGTATTTGCGAGAAGGGAA
AACCGTTACCCGCCATGAAAACGGAACGGGACAGGATTTTATATTTCTAA
TTTTAGAGCGGGACGCGATTCCCGTTTCGTTCTCTCTTTCTTACGGGGAG
GGTCAAGGGAAAATTCCCCGGGAAACGGAACAATTTCCTGCAAGATTTCC
TTTAAAAATAACGAAAAATGTCACGGAACTTTGGTTGTTGTGTTCTCTGC
TAGGTATTATGACGTACAGAGCAGTTGGAATAAGAATTTTTGCCTTTGAT
GCGGGAAACGGAACATTTTCCCGTCAGATTTTTCATAAAAATAATGAGAA
ATCTCACGGGACTTTTGTTTGTTGAGAGAAAAATCTAAACGCATCTAGAC
TATTCTATTATACTATACTATACCCCAGTCAGGGGGGGGGGAATGTCAAA
ACATTTAGGTGGGATCATAGGCTGCAAATACAAATCCTTTTCGTGGCATT
TAAACGGGTTAGGTTCCCCTATGGTATTAATTGTAACATTGAGTCAACAG
ATTAAGTCAAGGAGAAACCCACCGTTATGCTCTACACTTACATTAATCGC
TATGCAGGGACACCAGACAAATACAAAACAAAAACATTTTTAGTAAATAA
TGAACTATACAGCTGTAACAGTGTTATCGATCCTTAGGTACTTTCAACAT
GCCTACTTCATACCAATAGTGGGTGTGGGAAAGAGAGGCGAATATTAATT
GGTTCATGGTGACCTGCCAAGGCAGCACTCGTTCGGAAATACCTTGAGGC
TTACTGGCCCTGTGGCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGC
AATTGCGTGACCCGATAAACTCGGGACTGACCTATGGCGTATGTTGGTTT
CATAAATGGACGCCGCCGCGGAACTCGGGAGGAGTCCCGTAAGTAAGCAC
CAGATTTAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACCGGACGG
CCGAACCCGTCTCGCTTGACCAAATTCTCAGGCACGTATGGGGACAGGGG
AATATTCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTC
CCCGGTTGATCCATACTCTGCTACATATAATTATTGTGATGACGATATAT
ACAAGAAGCAATATTACATTATTGTAATTGGTAAAGAGAAAAATACATTT
ATTTACATTATACAACAAGTCCGCAGGGACATTCTACTACGTGTTGTGTA
TAAAATTATTTTTTCATAGGCTAAAAGTACAACCTCTTCATGGCATTACT
TTCCATTCAAATTAATCAATACATACATGGGTTTAAAGAAAAATCAGAAG
GCGTTGTTGTGTTCTCTCTCCTAAGTATCATAACGTACAGTAGTTATAAT
AGTAGACTGTTCTGCAGCGCACGTTGCAGCCTTTGCCCTTCTCGTCATCA
GAAGGCATTTCCTTCTATACGCTTGTTCATCCGAATAAGTATGTACAAGT
ATACTGTATGTAGTCATATGTAGTTATGTTATTGTTAGTATGAGTCATCA
CGTTCAGCAGAGCAGTGTATACATGAACCGGGTATGTTACTGTGGCCAGC
TGAACAGAACGAAATTATTTTTTCCCTGGCCCCGCACGCGCCTGGGAATT
TGCCCTCGCGAGACAGGTTCGGCCGTCCCGTCCCGCATCAGCCCGCCCAT
TGTCCACACCAAGGCTGAATCTGGTGCTTCTTTGCGGGGCTCCTCTCTTT
CCTCTTAATCCCACTTTTCGCGGCGACGGCGTCCCATCTATACCGTCGAC
CGCCATCGGGCGAGTCCCGAGGTTGTCGGTTAATATAACTGCTTAGCGAT
GGTGTTCGCCTCCCAGAGTCTGTCGACACAGGGCCAGCTTTCATCGAGGT
GTCTCGAGTAACAGGTGCTGCCAGTTTCAGGGGGGAAAAAAACATGGAAC
TAATTAACGTACGCCTCTCTTTCCCTGCAGCCGCTATAAATTACTTAGGC
CGGTACTTTCAACGTGCCCACTTCATACCAATAGTGGGTATGGGAAAGAG
AGGCGCATATTAATTAGTCCATGGTGACCTGCCAAGGCAGCACCCGTTCG
GAACTACCTTGAGGTTTACTGGCTCTGTGCCGGCGGACTCTCGGCAGTGA
ACGCCATCGGTATGCAATTGCGTGACCCGATAAACTCGGGACTGACCCTA
TGGCGTATGGTTGTTTCATAAATGGACGCCGCGGCGGAACTCGGGAGGGA
TCCCGTAAGTAAGCATCAGTGTCGGCCTGAATATAGAGATGAGTAGACTG
GCGCGGGACCGGACTACTGAACCCGTCTAACGAGACCAAACTCTTCGGCA
CGCACGGGGACAGGGGAATATTCATTTTCCCTGTTCAGCTGACCACGAGC
AGGATTCGCAACCTTCCCCTGTTGATCCGTACGCTGCTATATGTGATGAC
CATACATACACATACATACTAATCGTACAGTGGACATGTGCAATGCAAAA
AGCATCGGAGGTATATACCATACTTGTAGTGTAGAATTACTACTGCTAAG
ATGAACATCTCAGCATTTTCCCATCCTACCTTCAAGATATGTTGCTCTTT
GAGAGTTATTTTATTTTCGTGTTCGCCGTCGATACTCTACTGTACTGTAC
TGTACTGTACTGTACTGTACTGTACTGTGCCCCTCTTGGAAACGGCTCAA
TGTGACGAGTGTAGGGCGCGTCGGCTCGGTGTCTCGACCCCATCCGGTTT
CACGTGGTCATGCCTCGTACCCGAATCGTACGCGCGCGCTCGTGCCGCTA
TTAAAACACAACACGCGGTCGCAGCTTGTTACGTACAGTTTTCGTTTTTG
TTTGGAATCTCGCTTTTCTTCCTATAGCACCTTTGCCTGTACCAGTATCA
ACTTTTACAAGTCTTAGCCATCTCACCCCGCTGCTGAAGTCAAGTCATTC
ATAGTTGCCTACATTCCGCATGTGATGTCCTTGTGTTAAGGGATATCTAT
CCGACAGCCTGTCTTTGGTGTTGCGGGACATGATGATTGTACATTCGGCG
TTAACAAGTTACCTCTCAACTCTCGTGTACGACTCAAGTCGTACCTTCGA
GAACCTTTGTCATAATAACGTATTTTTACCGGTCTCATCCGTTGGCGCGT
CGCTGTGTTCGGTAGAGCTACTTGTCTACTCTCCATGCCGTTTCTATCCT
GTCTTCCAAAATTCGTCCCTCGTTGGGAGCTTTCTGCTCACAACTTGTTG
GCAATGCTCAGAACCTTCGCCATATGCTGAGGCCCGAGCTCTCCTTGTTC
TTGATTAATACAGAAGCAGTCGTTAGCAACCCCAGTGCACGCTTGCATGC
CGCTTGCAGCGCGGAAGCTCTTGTTTTTATTTTTTTCTGCTTCTTGGACG
AGACGGTGTCGCCTTTCCAGCTGCGGTTTTCTATTTTGACGGGGGTTTTT
TACCGAGGAACAACTCTCGTGAAAAGAAAAACGCGCGGTACGTGTCAAGA
AGTTTCTATGTTTTGAGGGCAAAAACCAATCAGTTGTGTACCCGGACATT
GCGGCCCATAGTAAATTAAGTATCCCGTGATGTCGTGCCGTGAAAAGTCG
TTCTGTCCTGGCAGTCCATCCTGTCCTCGATCACCGCGAGGCGTGCGCAC
GCGGATGCAGATTGGGGTCAGCCTGCCCGCCGAGTCATCTGTTCATGCCC
TTCCCCTGATCGAATCTTAGCGCGTGTCTCTTCCACCACGGTACCATGTT
ATGTTAACCCCCAACGTCCACGAATTCGAGGTAAGCAGACCATATTTCCA
GAATTCAAGCCGCAGTTATCCTACCATATTTCCATTATATTTTTTTTCCA
TATCGATCCAGCAAGGATCTACAGTTTTCCATTCTGTTCTATTTGATAGC
GATTGTTATCACAGAACTTGCAGGGCATCTTGGACCTTCTATTGCCTTCG
ACCTTCTATTGCCGAGTAGTACCGGTACCCGGTGCAGTTCACGGTTCAAT
CGGTCGATGTTCAAAAGCACAGCCGCGGATATGTTATATTTTGTCGTCTG
TCCTGCGACCTGTAACCCTAAAGTACTGTCAATATGATGTTATATTATTC
TATATTATATTGATAACTATTTGTTTCCGAGTGTTAGAAAAACACCGCGT
CCTCTTGTACTCGCCGTGTCACCGGAGCGGTGATTCATCTACTTATTCAT
ATACATGGTAATTCATTTGTTAGGATTGTGTTTTTTTTTACGGGGATTGG
ATCTGTTTTGGTCGTTGGACATTTTTGGGAGTGCATATTCTGTAAGCTCT
CGTTAGAATCCGTACAGCCGACAAAACTAAAGCCCGTCGAGACCTCATTG
TCGACACATAGAAGACCGGTATCATACCTCGGCGTGATCACGCTCGCGCC
CCTTGTCGCGACAAATTACATCATAAACTTAAAATCGCACGGTCCGCTGC
ACCGGTCAGGAGTGCGTGTCCGAATTCATCTGCTTCATCACCTCCGAGGC
GAGCGACAAGTGCAAGCAGGAGAAGCGGAAGACCATCAACGGCGAGGATC
TGCTGTGGGCCATGAGCACGCTCGGCTTCGACAAGTACGTGGAGCCGCTC
AAGGTATACCTCGCCAAGTACCGCGAGTCCGTCAAGCTCGAGAAGCCCGA
CAGAAAGGGCAAGCGGGACGATGGGAGCGAAGCTATGGCTACCGGCGGGT
ACTACGGGGCGCCAGGCGGGGCGGGGGGCGGGGGCGCGGGCGGCATGCCC
TCGGGTTTCTGA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig64:356527..368488- >mRNA_F-serratus_M_contig64.17314.1 ID=mRNA_F-serratus_M_contig64.17314.1|Name=mRNA_F-serratus_M_contig64.17314.1|organism=Fucus serratus male|type=CDS|length=882bp|location=Sequence derived from alignment at F-serratus_M_contig64:356527..368488- (Fucus serratus male) ATGGCGGAGGACGCGGGAGACACAGAAGAGCTGCGGGAGCAGGACCGCTT TCTGCCAATCGCCAACATCTCCCGCATCATGAAGAAGTCTCTGCCGGAGA ATGCCAAGATTGCCAAGGATGCTAAGGAGACCGTACAGATGGCGGAGGAC GCGGGAGACACAGAAGAGCTGCGGGAGCAGGACCGCTTTCTGCCAATCGC CAACATCTCCCGCATCATGAAGAAGTCTCTGCCGGAGAATGCCAAGATTG CCAAGGATGCTAAGGAGACCGTACAGGAGTGCGTGTCCGAATTCATCTGC TTCATCACCTCCGAGGCGAGCGACAAGTGCAAGCAGGAGAAGCGGAAGAC CATCAACGGCGAGGATCTGCTGTGGGCCATGAGCACGCTCGGCTTCGACA AGTACGTGGAGCCGCTCAAGGTATACCTCGCCAAGTACCGCGAGTCCGTC AAGCTCGAGAAGCCCGACAGAAAGGGCAAGCGGGACGATGGGAGCGAAGC TATGGCTACCGGCGGGTACTACGGGGCGCCAGGCGGGGCGGGGGGCGGGG GCGCGGGCGGCATGCCCTCGGGTTTCTGAGAGTGCGTGTCCGAATTCATC TGCTTCATCACCTCCGAGGCGAGCGACAAGTGCAAGCAGGAGAAGCGGAA GACCATCAACGGCGAGGATCTGCTGTGGGCCATGAGCACGCTCGGCTTCG ACAAGTACGTGGAGCCGCTCAAGGTATACCTCGCCAAGTACCGCGAGTCC GTCAAGCTCGAGAAGCCCGACAGAAAGGGCAAGCGGGACGATGGGAGCGA AGCTATGGCTACCGGCGGGTACTACGGGGCGCCAGGCGGGGCGGGGGGCG GGGGCGCGGGCGGCATGCCCTCGGGTTTCTGA back to top
|