mRNA_F-serratus_M_contig639.17288.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig639.17288.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 189 bits (479), Expect = 5.430e-51 Identity = 91/175 (52.00%), Postives = 123/175 (70.29%), Query Frame = 1
Query: 79 DVMGATVNQSMVVTFFHCSAGSFWNLTTSSDGNAASCV-FCIDILDSDLEGLDCSEPGASTRTLPIESGYWRASLNFTIVRECFNEDACVGGGAVQSVEDYCDDGYEGPYCAVCSAGYGRGSSNSCHECTPEFKGGMYFISVVAVLISTVVFIMLVIYLVGGSVALSQTVFSIME 600
D G T S V+F HC +G++WN + +G++ SC C D+ D D +G++C E GA+TRTLPI+SGYWRASL+ +R+CFNEDAC GG V S ++YC+ GYEGP CAVC++GYGRG +N+CH CT FKGGMYF+ VA L++ V +L +YLVGG A+S T+ + E
Sbjct: 918 DGEGETAAASFDVSFVHCESGTYWNNSCDPEGDSVSCCELCTDV-DGDEDGVNCDENGATTRTLPIQSGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRE 1091
BLAST of mRNA_F-serratus_M_contig639.17288.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI) HSP 1 Score: 187 bits (474), Expect = 2.440e-50 Identity = 88/169 (52.07%), Postives = 118/169 (69.82%), Query Frame = 1
Query: 94 TVNQSMVVTFFHCSAGSFWNLTTSSDGNAASCVFCIDILDSDLEGLDCSEPGASTRTLPIESGYWRASLNFTIVRECFNEDACVGGGAVQSVEDYCDDGYEGPYCAVCSAGYGRGSSNSCHECTPEFKGGMYFISVVAVLISTVVFIMLVIYLVGGSVALSQTVFSIME 600
T S V+FFHC G++WN + G++ SC LD D +G+DC + GA+TRTLP++SGYWRASL+ +R+CFNEDAC GG V S ++YC+ GYEGP CAVC++GYGRG +N+CH CT FKGGMYF+ VA L++ V +L +YLVGG A+S T+ + E
Sbjct: 573 TAAASFDVSFFHCLEGTYWNNECDTGGDSDSCCELCTDLDGDEDGVDCEDMGATTRTLPVQSGYWRASLDSVYIRQCFNEDACRGGSIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLAVASLLTLFVVALLAVYLVGGRGAVSNTMTNTRE 741
BLAST of mRNA_F-serratus_M_contig639.17288.1 vs. uniprot
Match: D7G5M2_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5M2_ECTSI) HSP 1 Score: 177 bits (449), Expect = 3.400e-47 Identity = 86/178 (48.31%), Postives = 121/178 (67.98%), Query Frame = 1
Query: 79 DVMGATVNQSMVVTFFHCSAGSFWNLTTSSDGNAASCV-FCIDILDSDLEGLDCSEPGASTRTLPIESGYWRASLNFTIVRECFNEDACVGGGAVQSVEDYCDDGYEGPYCAVCSAGYGRGSSNSCHECTPEFKGGMYFISVVAVLISTVVFIMLVIYLVGGSVALSQTVFSIMEFSR 609
D G S V+F HC +G++WN + +G++ SC C D+ D +G++C GA+TRTLP++ GYWRASL+ +R+CFNEDAC GG V S ++YC+ GYEGP CAVC++GYGRG +N+CH CT FKGGMYF+ V L++ V +L +YLVGG A+S T+ + E++R
Sbjct: 302 DGEGEIAAASFDVSFVHCESGTYWNNSCDPEGDSVSCCELCTDV-GGDEDGVNCEIDGATTRTLPVQPGYWRASLDSDYIRQCFNEDACQGGRIVASEQEYCNAGYEGPQCAVCASGYGRGVANACHLCTASFKGGMYFVLGVTALLTFFVAALLAVYLVGGRGAVSNTLTNTREWAR 478
BLAST of mRNA_F-serratus_M_contig639.17288.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE) HSP 1 Score: 175 bits (443), Expect = 3.630e-46 Identity = 84/169 (49.70%), Postives = 115/169 (68.05%), Query Frame = 1
Query: 94 TVNQSMVVTFFHCSAGSFWNLTTSSDGNAASCVFCIDILDSDLEGLDCSEPGASTRTLPIESGYWRASLNFTIVRECFNEDACVGGGAVQSVEDYCDDGYEGPYCAVCSAGYGRGSSNSCHECTPEFKGGMYFISVVAVLISTVVFIMLVIYLVGGSVALSQTVFSIME 600
T S V+F C +G++WN + + +A C C D+ D +G++C E GA+TRTLP++ GYWRASL+ +R+CFNEDAC GG V S ++YC+ GYEGP CAVC+ GYGRG +N+CH CT FKGGMYF+ VA L++ V +L +YLVGG A+S T+ + E
Sbjct: 1036 TATASFDVSFVRCESGTYWNNSCDAK-ESACCELCTDV-GGDEDGVNCDENGATTRTLPVQPGYWRASLDSVYIRQCFNEDACQGGSIVASEQEYCNAGYEGPQCAVCAPGYGRGVANACHLCTASFKGGMYFVLAVAALLTLFVAALLAVYLVGGRGAVSTTMTNTRE 1202
BLAST of mRNA_F-serratus_M_contig639.17288.1 vs. uniprot
Match: D7FXY9_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY9_ECTSI) HSP 1 Score: 158 bits (399), Expect = 2.690e-40 Identity = 75/164 (45.73%), Postives = 100/164 (60.98%), Query Frame = 1
Query: 115 VTFFHCSAGSFWNLTTSSDG--NAASCVFCIDILDSDLEGLDCSEPGASTRTLPIESGYWRASLNFTIVRECFNEDACVGGGAVQSVEDYCDDGYEGPYCAVCSAGYGRGSSNSCHECTPEFKGGMYFISVVAVLISTVVFIMLVIYLVGGSVALSQTVFSIME 600
V ++ C G+FWN + S +C C + +D +EG+DC+ GA+T LPI++GYWRA++ +RECFNE AC GG V V+DYC++GY GP CAVC G+G+G ++ CH CT FKGGMYF+ V IYLVGG A+S TV S E
Sbjct: 822 VEYYFCDEGNFWNSSVSGADLDPTVACTLCTESIDGAIEGVDCASAGATTTELPIKAGYWRANVTSLTIRECFNEGACKGGTTVAEVQDYCNEGYVGPQCAVCDTGFGKGVADECHSCTAGFKGGMYFLLAVXXXXXXXXXXXXXIYLVGGKRAVSSTVVSTKE 985
BLAST of mRNA_F-serratus_M_contig639.17288.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.260e-39 Identity = 73/164 (44.51%), Postives = 100/164 (60.98%), Query Frame = 1
Query: 115 VTFFHCSAGSFWNLTTSSDG--NAASCVFCIDILDSDLEGLDCSEPGASTRTLPIESGYWRASLNFTIVRECFNEDACVGGGAVQSVEDYCDDGYEGPYCAVCSAGYGRGSSNSCHECTPEFKGGMYFISVVAVLISTVVFIMLVIYLVGGSVALSQTVFSIME 600
V ++ C G+FWN + S +C C + +D +EG+DC+ GA+T LPI++GYWRA++ +RECFNE AC GG V V++YC++GY GP CAVC G+G+G ++ CH CT FKGGMYF+ V IYLVGG A+S TV + E
Sbjct: 786 VEYYFCDEGNFWNSSVSGADLDPTVACTLCTESIDGAIEGVDCASAGATTTELPIKAGYWRANVTSLTIRECFNEGACKGGTTVAEVQEYCNEGYVGPQCAVCETGFGKGMADECHSCTAGFKGGMYFLLAVXXXXXXXXXXXXXIYLVGGKSAVSSTVVNTKE 949
BLAST of mRNA_F-serratus_M_contig639.17288.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.510e-36 Identity = 71/164 (43.29%), Postives = 96/164 (58.54%), Query Frame = 1
Query: 115 VTFFHCSAGSFWNLTTSSDG--NAASCVFCIDILDSDLEGLDCSEPGASTRTLPIESGYWRASLNFTIVRECFNEDACVGGGAVQSVEDYCDDGYEGPYCAVCSAGYGRGSSNSCHECTPEFKGGMYFISVVAVLISTVVFIMLVIYLVGGSVALSQTVFSIME 600
V + C GSFWN + S +C C + +D +EG+DC+ GA+T+ LPI++GYWRA + +REC NE+AC GG V V++YC++GY GP CAVC G+G+G + CH CT F+GGMYF+ YLVGG A+S TV S E
Sbjct: 1006 VEHYLCDEGSFWNSSVSGADLDPTVACKLCTESIDGAVEGVDCTSAGATTKELPIKAGYWRAKVTSLTIRECLNEEACKGGTTVAEVQEYCNEGYVGPQCAVCGTGFGKGVAYECHPCTAGFQGGMYFLLAXXXXXXXXXXXXXXXYLVGGKSAVSSTVVSTKE 1169
BLAST of mRNA_F-serratus_M_contig639.17288.1 vs. uniprot
Match: D8LRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF7_ECTSI) HSP 1 Score: 121 bits (303), Expect = 1.280e-27 Identity = 68/180 (37.78%), Postives = 98/180 (54.44%), Query Frame = 1
Query: 73 ESDVMGATVNQSMVVTFFHCSAGSFWNLTTSSDGNAASCVFCIDILDSDLEGLDCSEPGASTRTLPIESGYWRASLNFTIVRECFNEDACVGGGAVQSVE---DYCDDGYEGPYCAVCSAGYGRGSSNSCHECTPEFKGGMYFISVVAVLISTVVFIMLVIYLVGGSVA--LSQTVFSIM 597
E D ++N S F +C+AG +W + +S C+ C D+ + EGL C G TLP+ GYWR++ T +RECFN+DAC+G Q + DYCD GY GPYCAVC GY G S++CH C + GM + + ++ V ++++ LVG LS+T FS+M
Sbjct: 407 EVDPFATSINAS----FVYCNAGQYWVASETS------CMMCADVA-LNPEGLSCDSEGTLLETLPLAEGYWRSTETSTNIRECFNDDACIGSEVSQRISSPNDYCDTGYMGPYCAVCMDGYTTGVSHTCHSCDGSYWAGMVVVMALTGVVLVVGVVIVLNDLVGNPALTDLSETHFSVM 575
BLAST of mRNA_F-serratus_M_contig639.17288.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI) HSP 1 Score: 117 bits (293), Expect = 3.650e-26 Identity = 64/153 (41.83%), Postives = 86/153 (56.21%), Query Frame = 1
Query: 121 FFHCSAGSFWNLTTSSDGNAA-SCVFCIDILDSDLEGLDCSEPGASTRTLPIESGYWRASLNFTIVRECFNEDACVGGGAVQSVEDYCDDGYEGPYCAVCSAGYGRGSSNSCHECTPE-----FKGGMYFISVVAVLISTVVFIMLVIYLVGG 561
F+ C A F D NAA SC C++I EGLDC PGA+ +LPI GYWR+S + +C + ACVG + S +DYC +GY+GPYC VC+ G+GRG+ N+CH C G F V+ +L+ I+ V+YLVGG
Sbjct: 851 FYLCQA--FEYAMPVDDENAAFSCEQCVNI--DGAEGLDCELPGATLASLPIREGYWRSSRESLSIHQCVHHTACVGATQISSAQDYCGEGYQGPYCTVCTEGFGRGAGNTCHSCEGTKSRLLIAAGSLFALVILLLV-----ILAVVYLVGG 994
BLAST of mRNA_F-serratus_M_contig639.17288.1 vs. uniprot
Match: D7FRH3_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH3_ECTSI) HSP 1 Score: 113 bits (282), Expect = 1.060e-24 Identity = 59/152 (38.82%), Postives = 81/152 (53.29%), Query Frame = 1
Query: 121 FFHCSAGSFWNLTTSSDGNAASCVFCIDILDSDLEGLDCSEPGASTRTLPIESGYWRASLNFTIVRECFNEDACVGGGAVQSVEDYCDDGYEGPYCAVCSAGYGRGSSNSCHECTPE-----FKGGMYFISVVAVLISTVVFIMLVIYLVGG 561
F+ C A + + + SC C + + EGLDC PGA+ +LP+ GYWR+ + +C ACVG + S +DYC +GY+GPYCAVC+ G+GRG+ NSCH C G F V+ +LI I+ V YLVGG
Sbjct: 844 FYLCQAFEY-AMPVDGEDTTFSCEQCASV--NGAEGLDCEIPGATLASLPVREGYWRSGGESLTIHQCSPSSACVGAAQISSAQDYCGEGYQGPYCAVCAEGFGRGAGNSCHSCEGTKSRLLIAAGSLFALVILLLI-----ILTVAYLVGG 987 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig639.17288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig639.17288.1 >prot_F-serratus_M_contig639.17288.1 ID=prot_F-serratus_M_contig639.17288.1|Name=mRNA_F-serratus_M_contig639.17288.1|organism=Fucus serratus male|type=polypeptide|length=256bp LNVSTSDSVQGQSEEGGGTSTAFAESDVMGATVNQSMVVTFFHCSAGSFWback to top mRNA from alignment at F-serratus_M_contig639:1324..3681- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig639.17288.1 ID=mRNA_F-serratus_M_contig639.17288.1|Name=mRNA_F-serratus_M_contig639.17288.1|organism=Fucus serratus male|type=mRNA|length=2358bp|location=Sequence derived from alignment at F-serratus_M_contig639:1324..3681- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig639:1324..3681- >mRNA_F-serratus_M_contig639.17288.1 ID=mRNA_F-serratus_M_contig639.17288.1|Name=mRNA_F-serratus_M_contig639.17288.1|organism=Fucus serratus male|type=CDS|length=1536bp|location=Sequence derived from alignment at F-serratus_M_contig639:1324..3681- (Fucus serratus male)back to top |