mRNA_F-serratus_M_contig632.17199.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig632.17199.1 vs. uniprot
Match: A0A6H5KPZ5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ5_9PHAE) HSP 1 Score: 311 bits (798), Expect = 3.300e-104 Identity = 138/233 (59.23%), Postives = 183/233 (78.54%), Query Frame = 1
Query: 1 TNALRVVAPSEGMTVVSSEPYTMQWTGASGDDLFEINLYYCGSYSFCFEQDDDCGSYIADLCGESGSDC-VQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFRCSEDFYLMSSADAALVGVAGGATMDVVMPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYISGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEV 696
T ALRV+ P+ +V S PY + W GA DD FE++L+YCGSYSFCF + +DCG +IA++C E+ C +Q+D +++V PEP+AG+S +GYRVRI+EVGTD FRCSEDFYL++SAD G GG TM+VV P ++++AVAGE YTVEFDYDNGFG+++GRF IDLY + G+GDCG+WVT++CDKP+ GC D++GDYDVVIPA + G Y IRVGLFG+D++Y CS FE+
Sbjct: 22 TEALRVLTPAVAESVASGRPYVVSWQGAQADDRFEVDLHYCGSYSFCFGEAEDCGFWIANVCNEADDACMIQDDQSSQVTFPEPVAGHSNNGYRVRISEVGTDNFRCSEDFYLVASADVLEFGEPGGPTMEVVAPEANALAVAGETYTVEFDYDNGFGEQLGRFKIDLYKAEGNGDCGSWVTSVCDKPDMGCRDSEGDYDVVIPADSEEGMYKIRVGLFGDDSIYACSPSFEI 254
BLAST of mRNA_F-serratus_M_contig632.17199.1 vs. uniprot
Match: D8LEQ9_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEQ9_ECTSI) HSP 1 Score: 303 bits (775), Expect = 1.540e-100 Identity = 143/238 (60.08%), Postives = 185/238 (77.73%), Query Frame = 1
Query: 1 TNALRVVAPSEGMTVVSSEPYTMQWTGASGDDLFEINLYYCGSYSFCFEQDDDCGSYIADLCGES-GSDCV-QEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFRCSEDFYLMSSADAALVGVAGGATMDVVMPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYISGGD---GDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVV 699
T AL+V+ P+ TVVS PY + W GAS DD FEI+L+YCGSYS+CFE+ + CG ++A++C E GS C+ Q D +++V PEP+ G S +GYR+RIAEVG+D +RCS+DFYLMSSADA VG GG T++VV PT+D++A+AGE YTVEFDYDNGFG+++GRF IDLY + G+ GDCGTWVT++CDKP+ GC D+QGDY+VVIP + G Y IRVGLFG+D +Y CS FEVV
Sbjct: 23 TEALQVLTPAVAETVVSGRPYIVSWNGASADDRFEIDLHYCGSYSYCFEEAE-CGFWLANVCAEGDGSGCMSQADQSSQVTFPEPLGGRSNEGYRIRIAEVGSDTYRCSDDFYLMSSADAPAVGEDGGPTIEVVAPTADALAIAGEIYTVEFDYDNGFGEQLGRFKIDLYKALGEDGAGDCGTWVTSVCDKPDVGCLDSQGDYNVVIPTDSEDGMYKIRVGLFGDDTIYACSPSFEVV 259
BLAST of mRNA_F-serratus_M_contig632.17199.1 vs. uniprot
Match: D7FN59_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN59_ECTSI) HSP 1 Score: 301 bits (772), Expect = 1.660e-100 Identity = 141/240 (58.75%), Postives = 181/240 (75.42%), Query Frame = 1
Query: 1 TNALRVVAPSEGMTVVSSEPYTMQWTGASGDDLFEINLYYCGSYSFCFEQDDDCGSYIADLCGESGSDCV-QEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFRCSEDFYLMSSADAALVGVAGGATMDVVMPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYISGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVVPQGEEL 717
T ALRV+ P+ TVVS PY + W GAS DD FEI+L+YCGSYSFCFE+ D+CG ++ +LC E C+ Q+D ++V +PEP+ G+S GYRVRI +VGT+ FRCS++FYLMSSADA+ G TM+VV P+S ++AVAG YTVEFDYDNGFG + GRF IDLY + G GDCG WV+++CDKP+ GCHDT+GDYD+VIP + G Y IRVGLFG+D+V+ CS FEVVP+ + L
Sbjct: 22 TEALRVLTPAVAETVVSDMPYIVSWKGASPDDRFEIDLHYCGSYSFCFEEADECGFWVTNLCAEGDDACMNQDDLMSQVTLPEPVDGHSNSGYRVRIGKVGTETFRCSDEFYLMSSADAS---DQDGPTMEVVAPSSGALAVAGAVYTVEFDYDNGFGAQQGRFKIDLYHAEGTGDCGDWVSSVCDKPDVGCHDTEGDYDIVIPRDSEGGMYKIRVGLFGDDSVFACSASFEVVPETQGL 258
BLAST of mRNA_F-serratus_M_contig632.17199.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI) HSP 1 Score: 251 bits (641), Expect = 2.200e-80 Identity = 122/233 (52.36%), Postives = 158/233 (67.81%), Query Frame = 1
Query: 4 NALRVVAPSEGMTVVSSEPYTMQWTGASGDDLFEINLYYCGSYSFCFEQDDDCGSYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFR-CSEDFYLMSSADAALVGVAGGATMDVVMPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYISGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVV 699
+AL VV P+EG VV+S YT++WTG ++ +EI+LYYCGS C E D+CG ++ LC C + ++VMPEP++G SG GY+VR+A+V D CS++FYLM+ A+A G AGG + V P+S A AGEEYTVEFDYDNG G VGRF+IDLY + G GDCGT++ T+CDKP GC D+ GDYDV IP AG Y IRVG F +D+VYGCS FE++
Sbjct: 6 SALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGS--MCME--DECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEIL 234
BLAST of mRNA_F-serratus_M_contig632.17199.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE) HSP 1 Score: 244 bits (622), Expect = 9.630e-78 Identity = 119/233 (51.07%), Postives = 154/233 (66.09%), Query Frame = 1
Query: 4 NALRVVAPSEGMTVVSSEPYTMQWTGASGDDLFEINLYYCGSYSFCFEQDDDCGSYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGT-DKFRCSEDFYLMSSADAALVGVAGGATMDVVMPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYISGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVV 699
+AL VV P+ G VVSS YT++W+G + FEI+LYYC S C E D+CG ++ LC C + ++VMPEP++G SG GY+VR+A+V D CS++FYLM+ ADA AGG + V P++ A AGEEYTVEFDYDNG G VGRF+IDLY + G GDCGT++ T+CDKP GC D+ GDYDV IP AG Y IRVG F +++VYGCS FE++
Sbjct: 19 SALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNS--MCME--DECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEIL 247
BLAST of mRNA_F-serratus_M_contig632.17199.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE) HSP 1 Score: 240 bits (613), Expect = 2.970e-76 Identity = 115/232 (49.57%), Postives = 155/232 (66.81%), Query Frame = 1
Query: 4 NALRVVAPSEGMTVVSSEPYTMQWTGASGDDLFEINLYYCGSYSFCFEQDDDCGSYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDKFR-CSEDFYLMSSADAALVGVAGGATMDVVMPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYISGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEV 696
NAL+V PS+G+TV++ YT++WTG S D+ FEI+LYYCGS C E DDCG ++ LC C + ++VMPEP+ G SG GY+VR+ ++ ++ CS++FYL++S++A VG G T++V P S +A EYTVEFDYDNG G V RF+IDLY + G+GDCGT+V +ICDKP GC D+ GDYDV IP T AG Y IRV F +D++Y CS F +
Sbjct: 18 NALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGS--MCME--DDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI 245
BLAST of mRNA_F-serratus_M_contig632.17199.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI) HSP 1 Score: 238 bits (608), Expect = 1.190e-75 Identity = 121/238 (50.84%), Postives = 153/238 (64.29%), Query Frame = 1
Query: 4 NALRVVAPSEGMTVVSSEPYTMQWTGASGDDLFEINLYYCGSYSFCFEQDDDCGSYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGT-DKFRCSEDFYLMSSADAALVGVAGGATMDVVMPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYISGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVVPQGEE 714
NAL VV PS + VV+ YT++WTGA FEI+LY+CGS C E D CG ++ LC C + ++VMPEP++G S GY+VR+ +V D CS+ FYLM+S DA G G + V P A AGEEYTVEFDYDNG G +V RFSIDLY++ GDGDCGT+VT+ICDKP+ GC D+ GDYDV IPA T AG Y IRVG F ++ +YGCS F ++ +E
Sbjct: 18 NALEVVTPSADLIVVADRTYTVEWTGADSG-RFEIDLYHCGS--MCME--DSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMGGDDE 250
BLAST of mRNA_F-serratus_M_contig632.17199.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI) HSP 1 Score: 228 bits (582), Expect = 9.090e-72 Identity = 119/233 (51.07%), Postives = 153/233 (65.67%), Query Frame = 1
Query: 4 NALRVVAPSEGMTVVSSEPYTMQWTGASGDDLFEINLYYCGSYSFCFEQDDDCGSYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDK-FRCSEDFYLMSSADAALVGVAGGATMDVVMPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYISGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVV 699
NAL VV+P+ G VV+ YT++WTGA+ ++I+LYYCGS C E D+CG ++ LC C +VVMPEP+ G S GY+V + + + + CS DF L++S +A GA + V P+ A+AG EYTVEFDYDNG G V RF+IDLY SGG GDCGT+VTTICDKP+ GC D+QGDYDVVIP+ T +G Y IRVG+F +D VYGCS FE+V
Sbjct: 18 NALEVVSPAAGDMVVADSAYTVEWTGATSG-RYDIDLYYCGSV--CME--DECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTSS-GYKVMVTDSSDESDYGCSGDFTLIASTEAP-DATDMGAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIV 243
BLAST of mRNA_F-serratus_M_contig632.17199.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI) HSP 1 Score: 219 bits (557), Expect = 5.870e-68 Identity = 112/234 (47.86%), Postives = 152/234 (64.96%), Query Frame = 1
Query: 4 NALRVVAPSEGMTVVSSEPYTMQWTGASGDDLFEINLYYCGSYSFCFEQDDDCGSYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRIAEVGTDK-FRCSEDFYLMSSADAALVGVAGGATMDVVMPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYISG-GDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEVV 699
NAL VV+P+ G++V++ YT++WTG S D FEI+LYYCGS FC E D+CG ++ LC C ++VMPEP+AG S GY+V + + + CS DF L++S DA G G ++ V P+ A+AG YTVE+DY+NG G RF+IDLY G G GDCGT+V T+CDKP+ GC D+QGDYDV IP+ T AG Y +RVG+F +D ++ CS+ FE+V
Sbjct: 18 NALEVVSPAAGISVIADRTYTVEWTGTS-DSRFEIDLYYCGS--FCME--DECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTSS-GYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGY-SLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIV 244
BLAST of mRNA_F-serratus_M_contig632.17199.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE) HSP 1 Score: 216 bits (549), Expect = 9.520e-67 Identity = 112/233 (48.07%), Postives = 153/233 (65.67%), Query Frame = 1
Query: 4 NALRVVAPSEGMTVVSSEPYTMQWTGASGDDLFEINLYYCGSYSFCFEQDDDCGSYIADLCGESGSDCVQEDSTAEVVMPEPIAGNSGDGYRVRI--AEVGTDKFRCSEDFYLMSSADAALVGVAGGATMDVVMPTSDSIAVAGEEYTVEFDYDNGFGDRVGRFSIDLYISGGDGDCGTWVTTICDKPNKGCHDTQGDYDVVIPASTTAGFYVIRVGLFGEDAVYGCSQPFEV 696
NAL VV+P G++V++ YT++WTG + FEI+LYYC S FC DD CG ++ LC C +++MPEP++G S GY+V + AE +D CS+DF L++S DA G G ++ V P+ A+AGE YTVE+DY+NGFG RF++DLY+ GG GDCGT+VTT+CD+P+ GC D+QGDYDV IP+ T AG Y IRVG+F ++ +Y CS FEV
Sbjct: 18 NALEVVSPDGGISVLADRAYTVEWTGTT-TGRFEIDLYYCNS--FCM--DDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTSS-GYKVMVKNAEDESD-MGCSDDFTLIASEDAPEAGEMGY-SLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEV 242 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig632.17199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig632.17199.1 >prot_F-serratus_M_contig632.17199.1 ID=prot_F-serratus_M_contig632.17199.1|Name=mRNA_F-serratus_M_contig632.17199.1|organism=Fucus serratus male|type=polypeptide|length=242bp TNALRVVAPSEGMTVVSSEPYTMQWTGASGDDLFEINLYYCGSYSFCFEQback to top mRNA from alignment at F-serratus_M_contig632:376682..380927- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig632.17199.1 ID=mRNA_F-serratus_M_contig632.17199.1|Name=mRNA_F-serratus_M_contig632.17199.1|organism=Fucus serratus male|type=mRNA|length=4246bp|location=Sequence derived from alignment at F-serratus_M_contig632:376682..380927- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig632:376682..380927- >mRNA_F-serratus_M_contig632.17199.1 ID=mRNA_F-serratus_M_contig632.17199.1|Name=mRNA_F-serratus_M_contig632.17199.1|organism=Fucus serratus male|type=CDS|length=1452bp|location=Sequence derived from alignment at F-serratus_M_contig632:376682..380927- (Fucus serratus male)back to top |