mRNA_F-serratus_M_contig6282.17130.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 282 bits (721), Expect = 2.530e-86 Identity = 164/341 (48.09%), Postives = 213/341 (62.46%), Query Frame = 1
Query: 1 EVSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKADKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSS---NALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQLQRVAVAGGSGSGRARDDSVSDE--------NVKTPTKSAGTEKDHAISAKFARIGLFTKV-DTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELSGKE 987
E+ E+YSL+KPV +LI Q T VPTGQAA+LGLA LKL+T N D LD++TP R + E G E + TS PR H LT+ G+ RE + A+ R++D+ Y S +D VFDMQM LHPTTA+L YVD+L + AA +K+ IT +++A AV+L + +G +D+SV+ +++T A +KD A +AKFA +GLF K + QP+ AEL+ L+ V AGTLT LSC +L+WWK+WGR +PLLAR ARVVF PASAAVLERDF+DA M SS D YVEMVLFLHGN DLIP IPEL ++
Sbjct: 288 EIDELYSLIKPVAELIVTCQQTHVPTGQAAVLGLATLKLSTFNVDARLDVLTPVRA--QGWPEGTGGGERKATSVPRLHNHLTQVGRDAREHLASALDRRYFDRCYKSADSEKTTDFVFDMQMGLHPTTADLQYVDKLTSTEVHAAFVKKSITDKIIALAVELAEKEMERKQ-AGPEQDESVAKRARPAAAPGSLQTAVAKARNKKDDAATAKFASLGLFKKRRGGGEASQQPTFEPMARAELETLRGVEAGTLTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDED 625
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 244 bits (624), Expect = 2.650e-71 Identity = 150/335 (44.78%), Postives = 198/335 (59.10%), Query Frame = 1
Query: 1 EVSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKADKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSSNALSDH--VFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQL-----QRVAVAGGSGSGRAR--DDSVSDENVKTPTKSAGTEKDHAISAKFARIGLF-TKVDTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPEL 975
E+ E+YSL++PV ++I Q T PTGQAA+LGLAALKL+TLNAD PLDI+TP K + TE G E+ R T+ R H++LT G+ RE + A+ WR +DKRY S VFDMQM LHP TA+L YV RLA + AA +K+ IT +++A A +L +R + G A+ + + N SA K+ +A A +GL T+ + +S +P + AEL+ L++ + L SC +L WWK+ +PLLAR+ARVVFA PAS V ERD AGRM SS D YVEMVLFLHGN DL+P IPEL
Sbjct: 396 EIDELYSLIQPVAEVIATCQQTHFPTGQAAVLGLAALKLSTLNADAPLDILTPASKPTQGATEGAGGEQ-RTTA--RAHKDLTRVGREAREHLASALHWRDFDKRYKSTVAKSTGLVFDMQMGLHPCTADLQYVSRLAPTEGHAAVVKKNITDKIIALAAKLADKKAERKGIEAEQGEPAAKRAPQASAPGNTYPMFASARYHKEATTTAIMAGLGLIATRDEGTSASP----IERARAELETLRSASDDALFGDTSCEGVLNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPEL 723
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 219 bits (559), Expect = 3.150e-62 Identity = 132/326 (40.49%), Postives = 173/326 (53.07%), Query Frame = 1
Query: 1 EVSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKADKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSSNALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQLQRVAVAGGSGSGRARDDSVSDENVKTPTKSAGTEKDHAISAKFARIGLFTKVDTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELS 978
E+ E+YS++KP +I + Q T+VPTGQ A+L LAALKL TLN D PL+I+TP RK + T IG E TS PR+H T K R+ + ++ W W+DKRY S D + + P T RL ++ A +R A GS V K+ +++ A + +A +GLF PS AEL L+AV G+L LSC +LKWWK W +PLLAR+ARVVF PASAAVLERDFS+AGRM SS D+ YVEM++FLHGN DLIP +I +L+
Sbjct: 375 EIDELYSIIKPAAQVIVKCQQTSVPTGQVAVLALAALKLITLNVDSPLEILTPARKLAQAETSGIGGGERPATSTPREHSLSTGVAKGTRQHICESVDWWWFDKRYKSAESQDTDY-VSTCRWPCTR-----PRLTCAALHTGDVSTTPAGSAAADEPAAKRARQAAAPGS------------VHPLFKAPVNKREEATTNMYASLGLFGPGGDEQNEEPPSFEQTARAELTNLRAVQGGSLAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLT 682
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 205 bits (521), Expect = 1.660e-58 Identity = 120/257 (46.69%), Postives = 151/257 (58.75%), Query Frame = 1
Query: 217 TSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSS--NALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQL-QRVAVAGGSGSGRARDDSVSDENVKTPTKSAGTEKDHAISAKFARIGLFTKVDTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELS 978
TS PR+H LT + R+ M ++ WRW+DKRY S + +D+VFDMQMALHPTTA+L YVD+LA A +K IT +V++ AV+L + A+ G GS TP SA +K A A+ A S PS AEL KL+AV G+L A L C +LKWWK W +PLLAR+ARVV ASAAVLE DFS+AGRM SS D+ YVEM+LFLHGN DLIP +I +L+
Sbjct: 219 TSTPREHSLLTGVARGTRQHMCESVDWRWFDKRYKSAKSQDTDYVFDMQMALHPTTADLRYVDKLASTSAFAGAVKSTITDKVISLAVKLAEAAALHTGDGS-------------TTPAWSAAADKPAAKRARQAAA-------PGSKEEPPSFEQTARAELTKLRAVQGGSLAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLT 455
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.940e-53 Identity = 111/238 (46.64%), Postives = 141/238 (59.24%), Query Frame = 1
Query: 277 MVGAIKWRWYDKRYSS--NALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQL-QRVAVAGGSGSGRARDDSVSDENVKTPTKSAGTEKDHAISAKFARIGLFTK-VDTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELS 978
M ++ WR +DKRY S + +D+VFDMQMALHPTTA L YV++LA A +K IT +V+ V+L + A+ G GS T AG E A + A +GLF VD + PQ S AEL KL+AV G L A L C +LKWWK W +PLLAR+ARVVF PASAAVLE FS+AGRM+ SS D+ YVEM++FLHGN +LIP +I +L+
Sbjct: 1 MCESVDWRRFDKRYKSAESQDTDYVFDMQMALHPTTAGLRYVEKLASTSAFAGAVKSTITDKVIFLTVRLAEAAALHTGDGS----------------TTPAGEE---ATTNMHASLGLFGPGVDGQNEEPQ-SFKQTARAELTKLRAVQGGRLAARLRCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLT 218
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE) HSP 1 Score: 189 bits (481), Expect = 4.720e-53 Identity = 127/338 (37.57%), Postives = 175/338 (51.78%), Query Frame = 1
Query: 1 EVSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKADKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSSNALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQLQRVAVAGGSGSGRARDDSVSDEN--VKTPTKS------AGTEKDHAISAKFARIGLFTKVDT-SSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELSGKE 987
++ E+YS++KPV +LI +Q T VPTGQAA LGLAALKL+T N D LD++TP R + E G E + TS PR + K S +D VFDMQM LHPTTA+L YVD+LA + AA + ++IT +++ AV+L + +G + +SV+ + P S A + + A +AKF + LF K ++ + QP+ AE + L+ V AG+LT L C +LKWW++W +PLLAR ARV F PA+ D YVEMVLFLHG DL P IPEL ++
Sbjct: 114 DIDELYSVIKPVAELIVTYQQTHVPTGQAAALGLAALKLSTFNVDARLDVLTPARAQGR--PEGAGGVEPKATSVPRCY------------------------KPADSAKTTDFVFDMQMGLHPTTADLQYVDKLASSKVHAAFVTKRITDKIITLAVELATKEMERKQ-AGPEQHESVAKQARPAAAPKSSHPAVARARNKNEDAATAKFTSLRLFKKRRVGANASQQPTFEPMACAEFETLRGVEAGSLTDDLGCEGVLKWWEKWEGSYPLLARAARVDFGAPAAG---------------------DAKYVEMVLFLHGKLDLFPEQIPELRDED 403
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE) HSP 1 Score: 138 bits (348), Expect = 1.140e-32 Identity = 107/339 (31.56%), Postives = 168/339 (49.56%), Query Frame = 1
Query: 4 VSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKADKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSSNAL----SDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQLQRVAVAGGSGSGRARDDSVSDENVKTPT---KSAG--TEKDHAISAKFARIGLF--TKVDTSSPT-PQPSVASQV-HAELDKLKAVNAGTLTACLSCSAILKWWKQWGRD-FPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELS 978
+ E+YSL+KP+ ++ E Q +PTG + L L+ TL+ +PL++ P RK R L T+ R + L + R + A+ R++ KRY +N + SD+VF+M + P L ++ + +D A + + I +VV V+L A G+ G+A + S + P +S G T + + + G+F +K TS P +V E D+ A A T + +L++W G+ +P +AR ARV+ +VPAS+AVLERDFS AGR+ + AYVEMVLFL+GN + IP +P+LS
Sbjct: 458 IEELYSLMKPISVIMKESQEKGLPTGLSTFAALVMLRADTLDVTKPLEVTVP-RKVTTTDWART----LATTTIERPADSLQDVTTTTRTMLAAALDKRFFSKRYDANVVAVPPSDYVFEMAACMSPALHTLPWLTSMCSSDEEAGRVHKLIKGKVVDLMVKL---AEGAGAYPGKATEGDTSGASASAPPPFKRSRGPLTVGTSERTKRLLKSGVFGGSKSSTSRDDGPSELTMKEVCQQEFDRFMARFADTTISDYPIEVLLEFWAGEGQALYPNMARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLS 788
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE) HSP 1 Score: 112 bits (280), Expect = 5.100e-27 Identity = 52/78 (66.67%), Postives = 59/78 (75.64%), Query Frame = 1
Query: 736 LSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIP 969
LSC ++LKWWK+W +PLLAR ARVVF PASAAVLE DF DAGR+ SS D YVEM+LFLHGN DLIP +IP
Sbjct: 32 LSCDSVLKWWKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIP 109
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A2V3IDA5_9FLOR (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDA5_9FLOR) HSP 1 Score: 112 bits (281), Expect = 7.430e-25 Identity = 94/328 (28.66%), Postives = 167/328 (50.91%), Query Frame = 1
Query: 10 EIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIITPERKA-DKNGTERIGREELRITSQPRKHEELTEAGKLLREKMVGAIKWRWYDKRYSSNALSDHVFDMQMALHPTTANLAYVDRLALNDTLAAEIKEKITSQVVAFAVQLQRVAVAGGSGSGRARDDSVSDENVKTPTKSAGTEKDHAISAKFARIGLF-TKVDTSSPTPQPSVASQVHAELDKLKAVNAGTLTACLSCSAILKWWKQWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNNDTAYVEMVLFLHGNSDLIPSNIPELSGKE 987
E++SL+ PV +++ + Q TT P L L L LN++EPL+I P R+ + + + R+ L + + LT+ ++L + A++ R+Y K Y+ S + +MQ+ +H L + + L A + + +I ++V ++ ++ A GG G R D+++ ++ K+ F T V+ S T + SV +++++ LD +A+ G +T+ +L WW+ G +P L+ +AR V P S+A ++RDF AG S +D+A+V+M+LFLH N DLIPS++PE+S E
Sbjct: 15 ELFSLMLPVSEIMKQAQLTTFPARIDGFLALCRLNRHLLNSEEPLEIYDPSREDYEAPNRQPMTRDPLHLCN-------LTKHTRVL---LSNALQKRFY-KSYNGTPRSS-MLEMQVFMHLVHRKLNCLGYI-LEPFDAEKHRNRIMDEIVDLCIKCEQ-AQNGGVEEGE-RQSIHGDKSIVLESQGVDKTKNFNNLWDFEEFACDDTPVEESLSTAEESVRAEINSYLDHERAL-PGDVTS----RNLLNWWRTKGSKYPSLSVVARAVLGHPVSSARIDRDFGTAGSFLSSRRTRHDSAFVDMLLFLHCNLDLIPSDVPEMSNPE 322
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 2.150e-20 Identity = 48/71 (67.61%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 769 QWGRDFPLLARIARVVFAVPASAAVLERDFSDAGRMSMSSERNND-TAYVEMVLFLHGNSDLIPSNIPELS 978
W +PLLAR+ARVVF PASAAVLERDFS+AGRM SS R D T YVEM+LFLHGN DLIP +I +L+
Sbjct: 1 MWAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLT 71 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6282.17130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6282.17130.1 >prot_F-serratus_M_contig6282.17130.1 ID=prot_F-serratus_M_contig6282.17130.1|Name=mRNA_F-serratus_M_contig6282.17130.1|organism=Fucus serratus male|type=polypeptide|length=329bp EVSEIYSLVKPVGDLITEFQNTTVPTGQAALLGLAALKLTTLNADEPLDIback to top mRNA from alignment at F-serratus_M_contig6282:21694..22716+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6282.17130.1 ID=mRNA_F-serratus_M_contig6282.17130.1|Name=mRNA_F-serratus_M_contig6282.17130.1|organism=Fucus serratus male|type=mRNA|length=1023bp|location=Sequence derived from alignment at F-serratus_M_contig6282:21694..22716+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6282:21694..22716+ >mRNA_F-serratus_M_contig6282.17130.1 ID=mRNA_F-serratus_M_contig6282.17130.1|Name=mRNA_F-serratus_M_contig6282.17130.1|organism=Fucus serratus male|type=CDS|length=1974bp|location=Sequence derived from alignment at F-serratus_M_contig6282:21694..22716+ (Fucus serratus male)back to top |