mRNA_F-serratus_M_contig622.17058.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig622.17058.1
Unique NamemRNA_F-serratus_M_contig622.17058.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig622.17058.1 vs. uniprot
Match: D7G0L7_ECTSI (DUF155 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0L7_ECTSI)

HSP 1 Score: 426 bits (1094), Expect = 1.510e-138
Identity = 223/289 (77.16%), Postives = 238/289 (82.35%), Query Frame = 3
Query:   27 RRPFASPPY-FTMEGQEGQEYQPRPWEMWEPAGGPNAEKPARIV-----NGRM--KDAGNSYVVMFKYGSVVFLHFNQSQQEEHLRRQRDFLYKEDKIMPADVKTETHGVALWSTLPEPARLEPDCTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMAKFSAINSGVEKTGMFSGSQKTELFQLVARNNTVRTDVISKLGILERSEAAWKHQDYNYVWEGLREEFEMDSRLKTLESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLIGAEIVVGVCDLLNFKPF 869
            RRPF  PP  F M+G     YQ R W+MWEP GG         V      GR   K+AGNSYVV+F YGSVVF+HF + QQE HL RQR+FLY+E KI P DVKT++HGV LWSTLPEPARLEPD TTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMM+KF AINSGVEKTG F+ +QK ELFQLVARNNTVRTDVISKLGILER EAAWK  DYNYVWEGLREEFEMDSRL+ +ESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLI AEIVVGVCDLLN KPF
Sbjct:  268 RRPFVPPPRPFAMDGPA---YQARAWDMWEPGGGEGGTGAGLRVLGVGMGGRRVGKEAGNSYVVLFDYGSVVFIHFTKEQQEAHLSRQREFLYEESKIPPGDVKTDSHGVVLWSTLPEPARLEPDRTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMSKFVAINSGVEKTGKFTAAQKKELFQLVARNNTVRTDVISKLGILERQEAAWKDPDYNYVWEGLREEFEMDSRLRKIESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLIAAEIVVGVCDLLNVKPF 553          
BLAST of mRNA_F-serratus_M_contig622.17058.1 vs. uniprot
Match: A0A7S2G731_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G731_9STRA)

HSP 1 Score: 217 bits (553), Expect = 7.320e-61
Identity = 118/240 (49.17%), Postives = 161/240 (67.08%), Query Frame = 3
Query:  147 RIVNGRMKDAGNSYVVMFKYGSVVFLHFNQSQQEEHLRRQRDFLYKEDKIMPADVKTETHGVALWSTLPEPARLEPDCTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMAKFSAINSGVEKTGMFSGSQKTELFQLVARNNTVRTDVISKLGILERSEAAWKHQDYNYVWEGLREEFEMDSRLKTLESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLIGAEIVVGVCDLLNFKP 866
            R V+ +M + GN ++V+F YGSVVF +F+  + ++ L+  R F    + I      TE + +     L E   L+ D T L+ELD +  T+I TV+ QTVALDHY  LVD M+  F+  N  VE+TG F+  +K +LF++VA+NN V  DVISKL +LERS+ AWK   Y +VWEGLREEFE+D R + L+ KL+++Q NT FF+E++HNQKS MLEW IIVLI AEIV+   DL +FKP
Sbjct:  120 RNVHPQM-EFGNRHMVVFDYGSVVFFNFDDLELQQRLKELRRFCV--EPIAQEVQMTEDYTLIERPHLRESCVLQNDLTILKELDFHSATVISTVMAQTVALDHYSALVDQMLEIFTEFNHTVERTGQFTAIEKNDLFKMVAQNNAVLIDVISKLSLLERSDTAWKMPQYVHVWEGLREEFEVDQRFENLKFKLNLIQDNTKFFLEIMHNQKSNMLEWVIIVLISAEIVLCSMDLCDFKP 356          
BLAST of mRNA_F-serratus_M_contig622.17058.1 vs. uniprot
Match: A0A7S3Y0X5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0X5_HETAK)

HSP 1 Score: 204 bits (520), Expect = 2.230e-55
Identity = 107/233 (45.92%), Postives = 161/233 (69.10%), Query Frame = 3
Query:  183 SYVVMFKYGSVVFLHFNQSQQEEHLRRQRDFLYKEDKIMPADVKT-----ETHGVALWSTLPEPARLEPDCTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMAKFSAINSGVEKTGMFSGSQKTELFQLVARNNTVRTDVISKLGILERSEAAWKHQDYNYVWEGLREEFEMDSRLKTLESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLIGAEIVVGVCDLLNFKP 866
            S+  +FKYGSVVF  FN S  +E +R+Q   L   +K     + T     + H + +  +L +  + + + + +RE++  ++ +IG VLGQTVAL+HY  +VD M+  F+ +NS VE+TG F+  +  +LF+LVARNN++  DVISK+G+LERSE AWKH +++ ++EGLREEF++++R   LE KL ++Q NT FF+E+LHN KST LEW II+LI AEI+V +CD+  +KP
Sbjct:  173 SHTAIFKYGSVVF--FNCS--DEQIRKQ---LKDIEKFCSGSIPTSFQHKDDHTIIIEPSLTKACQSQRNHSIVREINYKNLAVIGRVLGQTVALNHYEAMVDHMLEDFNRLNSVVEQTGKFTAMETQKLFKLVARNNSIFVDVISKVGLLERSETAWKHSEFDELFEGLREEFDLETRFANLEVKLGLIQNNTKFFLEILHNAKSTSLEWIIIILILAEIIVALCDMFGYKP 398          
BLAST of mRNA_F-serratus_M_contig622.17058.1 vs. uniprot
Match: A0A7S3NK34_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK34_9STRA)

HSP 1 Score: 196 bits (498), Expect = 9.610e-52
Identity = 95/165 (57.58%), Postives = 125/165 (75.76%), Query Frame = 3
Query:  375 DCTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMAKFSAINSGVEKTGMFSGSQKTELFQLVARNNTVRTDVISKLGILERSEAAWKHQDYNYVWEGLREEFEMDSRLKTLESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLIGAEIVVGVCDLLNFKPF 869
            D   L  LDV++I++I TV+ QTVALDHY   VD+M+A FS +NS VEKTG+F   +K  LF+LVA NNT+ TDVI+K+G+LERSE AW++ +Y  +WEGLR+EFE++ R + +E KL+++Q NT FF+E+L NQKS  LEW IIVLI  EIVVG CDL   +PF
Sbjct:  310 DAVVLPRLDVHNISVIATVMAQTVALDHYSVKVDAMLATFSRLNSNVEKTGIFDSLEKNNLFKLVALNNTLFTDVIAKIGLLERSETAWRNLEYTQIWEGLRDEFEVEDRFEKIEFKLNLVQLNTKFFLEILANQKSNTLEWIIIVLISLEIVVGTCDLCGIQPF 474          
BLAST of mRNA_F-serratus_M_contig622.17058.1 vs. uniprot
Match: A0A2R6WTI2_MARPO (DUF155 domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WTI2_MARPO)

HSP 1 Score: 191 bits (484), Expect = 3.020e-49
Identity = 104/242 (42.98%), Postives = 159/242 (65.70%), Query Frame = 3
Query:  132 AEKPARIVNGRMKDAGNSYVVMFKYGSVVFLHFNQSQQEEHLRRQRDFLYKEDKIMPADVKTETHGVALWSTLPEPARLEPDCTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMAKFSAINSGVEKTGMFSGSQKTELFQLVARNNTVRTDVISKLGILERSEAAWKHQDYNYVWEGLREEFEMDSRLKTLESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLIGAEIVVGVCDLLN 857
            A+ P     G +K+    Y+V F+YGSVVF +F   ++ E L   R +   E +    + + + +GV +  TLPE +    D   LR+LD+++I +I ++LGQ++ALDHY   VD M+  FS +N G+E+TG F+ ++K+ LFQLVA  NT   DVI +LG+LERS+AAWK  +Y  +WE +R++FE+D R ++L+ KL+++Q N  FF+E+L N+KS  LEW II+LI  EI V + D+L+
Sbjct:  319 ADNPEMACLGFLKER---YMVAFQYGSVVFFNFGDHEEVESLDIVRKYCSDEFR----ETRKDDYGVLVRPTLPEWSEGGHDRVMLRKLDIDNIRVISSILGQSIALDHYAKKVDEMVTTFSELNRGMEQTGTFTMTRKS-LFQLVAAANTTLADVILRLGLLERSDAAWKDANYAQIWEYMRDDFELDERFESLDFKLNIIQHNVRFFLEILQNRKSDTLEWIIILLITGEICVSLYDILH 552          
BLAST of mRNA_F-serratus_M_contig622.17058.1 vs. uniprot
Match: A0A2K1J4Y1_PHYPA (DUF155 domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J4Y1_PHYPA)

HSP 1 Score: 189 bits (479), Expect = 6.990e-49
Identity = 102/223 (45.74%), Postives = 149/223 (66.82%), Query Frame = 3
Query:  186 YVVMFKYGSVVFLHFNQSQQEEHLRRQRDFLYKEDKIMPADVKTETHGVALWSTLPEPARLEPDCTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMAKFSAINSGVEKTGMFSGSQKTELFQLVARNNTVRTDVISKLGILERSEAAWKHQDYNYVWEGLREEFEMDSRLKTLESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLIGAEIVVGVCDLL 854
            Y+V F+YGS+VF +F   ++EE L   R F   E +    + + + +GV +  TL + +    D   LR LD ++I +I ++LGQ++ALDHY   VD M+  FS +N G+EKTG F+ ++K+ LFQLVA  NT   DVI +LG+LERS+AAWK  +Y  +WE LR++FE+D R ++L+ KL+++Q N  FF+E+L N+KS  LEW II+LI  EI VGV  +L
Sbjct:  293 YMVAFQYGSIVFFNFGDDEEEEALAAVRKFCTDEFR----ETRKDDYGVLVRPTLRQWSEGGQDRIMLRMLDTDNIRVISSILGQSIALDHYAKKVDEMVNTFSELNRGMEKTGTFTMTRKS-LFQLVAAANTTLADVILRLGLLERSDAAWKDANYAQIWEYLRDDFELDERFESLDFKLNIIQHNVRFFLEILQNRKSDTLEWIIILLITGEICVGVYQIL 510          
BLAST of mRNA_F-serratus_M_contig622.17058.1 vs. uniprot
Match: A4RYT8_OSTLU (DUF155 domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RYT8_OSTLU)

HSP 1 Score: 181 bits (459), Expect = 2.010e-48
Identity = 99/227 (43.61%), Postives = 145/227 (63.88%), Query Frame = 3
Query:  186 YVVMFKYGSVVFLHFNQSQQEEHLRRQRDFLYKEDKIMPADVKTETHGVALWSTLPEPARLEPDCTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMAKFSAINSGVEKTGMFSGSQKTELFQLVARNNTVRTDVISKLGILERSEAAWKHQDYNYVWEGLREEFEMDSRLKTLESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLIGAEIVVGVCDLLNFKP 866
            Y+V+FK+GSVVF +    ++EE L+  R F         A   T+ + V +  TL + A LE D   L+ +D+N+I++I +VL QTVAL+HY   VD M+  FS +N   E TG  + S+K  LF LVA NN   T++I+KLG+L RS+ AW++  YN VWEGLR++FE++ R + L+ KL+++Q    F++E+L N+KS  LEW IIVLI  EI V + D+ +  P
Sbjct:   63 YLVVFKFGSVVFYNMGHKEREECLKLARSFT----STPLAVPMTDDYRVVVRPTLTDWASLESDHIVLKRMDINNISVISSVLAQTVALEHYEQKVDGMVEIFSKLNKSTELTGDLNISKK-RLFSLVAENNNTLTELITKLGLLGRSDTAWQYAQYNIVWEGLRQDFELEDRFQDLDYKLNLIQTQVKFYLEILQNRKSDALEWIIIVLISLEICVSLYDMADKIP 284          
BLAST of mRNA_F-serratus_M_contig622.17058.1 vs. uniprot
Match: D8SFQ0_SELML (DUF155 domain-containing protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SFQ0_SELML)

HSP 1 Score: 177 bits (450), Expect = 5.540e-48
Identity = 100/224 (44.64%), Postives = 151/224 (67.41%), Query Frame = 3
Query:  186 YVVMFKYGSVVFLHFNQSQQEEHLRRQRDFLYKEDKIMPADVKTETHGVALWSTLPEPARLEPDCTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMAKFSAINSGVEKTGMFSGSQKTELFQLVARNNTVRTDVISKLGILERSEAAWKHQDYNYVWEGLREEFEMDSRLKTLESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLIGAEIVVGVCDLLN 857
            Y+V+++YGSVV  +F   ++ E L   R +  KE+   P   K E +GV +  TL E +    D   LR+ D+++I II +VL Q++ALD++  LVD M+  FS +N G+E+TG F+ ++K +LFQLVA  N    DVI ++G+LERS+AAWK+ +Y  V+E +REEFE++ R K+L  KL+++Q N   F+E+L N+KS +LEW II+L+  EI VGV D+L+
Sbjct:    2 YMVVYQYGSVVLFNFGDEEETEFLNVVRKYC-KEEFGKP---KKEDYGVLIRPTLSEWSHGSHDIIMLRKFDIDNIRIIASVLAQSIALDYFAKLVDEMINVFSELNRGMERTGTFTMTRK-KLFQLVASANFTLADVIVRMGLLERSDAAWKNINYARVFEFMREEFELNERFKSLHFKLNIIQHNVRLFLEVLQNRKSDILEWIIILLLAGEIGVGVYDILH 220          
BLAST of mRNA_F-serratus_M_contig622.17058.1 vs. uniprot
Match: D8T9E4_SELML (DUF155 domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T9E4_SELML)

HSP 1 Score: 177 bits (450), Expect = 5.540e-48
Identity = 100/224 (44.64%), Postives = 151/224 (67.41%), Query Frame = 3
Query:  186 YVVMFKYGSVVFLHFNQSQQEEHLRRQRDFLYKEDKIMPADVKTETHGVALWSTLPEPARLEPDCTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMAKFSAINSGVEKTGMFSGSQKTELFQLVARNNTVRTDVISKLGILERSEAAWKHQDYNYVWEGLREEFEMDSRLKTLESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLIGAEIVVGVCDLLN 857
            Y+V+++YGSVV  +F   ++ E L   R +  KE+   P   K E +GV +  TL E +    D   LR+ D+++I II +VL Q++ALD++  LVD M+  FS +N G+E+TG F+ ++K +LFQLVA  N    DVI ++G+LERS+AAWK+ +Y  V+E +REEFE++ R K+L  KL+++Q N   F+E+L N+KS +LEW II+L+  EI VGV D+L+
Sbjct:    2 YMVVYQYGSVVLFNFGDEEETEFLNVVRKYC-KEEFGKP---KKEDYGVLIRPTLSEWSHGSHDIIMLRKFDIDNIRIIASVLAQSIALDYFAKLVDEMINVFSELNRGMERTGTFTMTRK-KLFQLVASANFTLADVIVRMGLLERSDAAWKNINYARVFEFMREEFELNERFKSLHFKLNIIQHNVRLFLEVLQNRKSDILEWIIILLLAGEIGVGVYDILH 220          
BLAST of mRNA_F-serratus_M_contig622.17058.1 vs. uniprot
Match: A0A7R9XR44_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9XR44_9CHLO)

HSP 1 Score: 181 bits (458), Expect = 9.790e-47
Identity = 99/227 (43.61%), Postives = 145/227 (63.88%), Query Frame = 3
Query:  186 YVVMFKYGSVVFLHFNQSQQEEHLRRQRDFLYKEDKIMPADVKTETHGVALWSTLPEPARLEPDCTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMAKFSAINSGVEKTGMFSGSQKTELFQLVARNNTVRTDVISKLGILERSEAAWKHQDYNYVWEGLREEFEMDSRLKTLESKLSMLQQNTNFFIEMLHNQKSTMLEWTIIVLIGAEIVVGVCDLLNFKP 866
            Y+V+FK+GSVVF +    ++EE L+  R F         A   T+ + V +  TL + A LE D   L+ +D+N+I++I +VL QTVAL+HY   VD M+  FS +N   E TG  + S+K  LF LVA NN   T++I+KLG+L RS+ AW++  YN VWEGLR++FE++ R + L+ KL+++Q    F++E+L N+KS  LEW IIVLI  EI V + D+ +  P
Sbjct:  204 YLVVFKFGSVVFYNMGHKEREECLKLARSFT----STPLAVPMTDDYRVVVRPTLTDWASLESDHIVLKRMDINNISVISSVLAQTVALEHYEQKVDGMVEIFSKLNKSTELTGDLNISKK-RLFSLVAENNNTLTELITKLGLLGRSDTAWQYAQYNIVWEGLRQDFELEDRFQDLDYKLNLIQTQVKFYLEILQNRKSDALEWIIIVLISLEICVSLYDMSDKIP 425          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig622.17058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0L7_ECTSI1.510e-13877.16DUF155 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2G731_9STRA7.320e-6149.17Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3Y0X5_HETAK2.230e-5545.92Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3NK34_9STRA9.610e-5257.58Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A2R6WTI2_MARPO3.020e-4942.98DUF155 domain-containing protein n=3 Tax=Marchanti... [more]
A0A2K1J4Y1_PHYPA6.990e-4945.74DUF155 domain-containing protein n=2 Tax=Physcomit... [more]
A4RYT8_OSTLU2.010e-4843.61DUF155 domain-containing protein n=1 Tax=Ostreococ... [more]
D8SFQ0_SELML5.540e-4844.64DUF155 domain-containing protein (Fragment) n=2 Ta... [more]
D8T9E4_SELML5.540e-4844.64DUF155 domain-containing protein (Fragment) n=1 Ta... [more]
A0A7R9XR44_9CHLO9.790e-4743.61Hypothetical protein n=1 Tax=Ostreococcus sp. 'luc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig622contigF-serratus_M_contig622:195711..200065 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score419.5
Seed ortholog evalue1.2e-114
Seed eggNOG ortholog2880.D7G0L7
Preferred nameRMD1
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005783,GO:0008150,GO:0008152,GO:0010467,GO:0012505,GO:0016020,GO:0031090,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0098588,GO:0098805,GO:0098852,GO:0140053
EggNOG free text desc.PFAM Uncharacterised ACR, YagE family COG1723
EggNOG OGsCOG1723@1,KOG2861@2759
Ec32 ortholog descriptionProtein of unknown function DUF155
Ec32 orthologEc-06_007250.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size2009
Cds size819
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931927.7282271-UTR-F-serratus_M_contig622:195710..1957691622931927.7282271-UTR-F-serratus_M_contig622:195710..195769Fucus serratus maleUTRF-serratus_M_contig622 195711..195769 +
1690964061.3594127-UTR-F-serratus_M_contig622:195710..1957691690964061.3594127-UTR-F-serratus_M_contig622:195710..195769Fucus serratus maleUTRF-serratus_M_contig622 195711..195769 +
1622931927.9487298-UTR-F-serratus_M_contig622:198934..2000651622931927.9487298-UTR-F-serratus_M_contig622:198934..200065Fucus serratus maleUTRF-serratus_M_contig622 198935..200065 +
1690964061.4593883-UTR-F-serratus_M_contig622:198934..2000651690964061.4593883-UTR-F-serratus_M_contig622:198934..200065Fucus serratus maleUTRF-serratus_M_contig622 198935..200065 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931927.7607393-CDS-F-serratus_M_contig622:195769..1959581622931927.7607393-CDS-F-serratus_M_contig622:195769..195958Fucus serratus maleCDSF-serratus_M_contig622 195770..195958 +
1690964061.3739667-CDS-F-serratus_M_contig622:195769..1959581690964061.3739667-CDS-F-serratus_M_contig622:195769..195958Fucus serratus maleCDSF-serratus_M_contig622 195770..195958 +
1622931927.7932363-CDS-F-serratus_M_contig622:196921..1970371622931927.7932363-CDS-F-serratus_M_contig622:196921..197037Fucus serratus maleCDSF-serratus_M_contig622 196922..197037 +
1690964061.3935087-CDS-F-serratus_M_contig622:196921..1970371690964061.3935087-CDS-F-serratus_M_contig622:196921..197037Fucus serratus maleCDSF-serratus_M_contig622 196922..197037 +
1622931927.8277552-CDS-F-serratus_M_contig622:197221..1972971622931927.8277552-CDS-F-serratus_M_contig622:197221..197297Fucus serratus maleCDSF-serratus_M_contig622 197222..197297 +
1690964061.4061525-CDS-F-serratus_M_contig622:197221..1972971690964061.4061525-CDS-F-serratus_M_contig622:197221..197297Fucus serratus maleCDSF-serratus_M_contig622 197222..197297 +
1622931927.8488953-CDS-F-serratus_M_contig622:197565..1976491622931927.8488953-CDS-F-serratus_M_contig622:197565..197649Fucus serratus maleCDSF-serratus_M_contig622 197566..197649 +
1690964061.4165044-CDS-F-serratus_M_contig622:197565..1976491690964061.4165044-CDS-F-serratus_M_contig622:197565..197649Fucus serratus maleCDSF-serratus_M_contig622 197566..197649 +
1622931927.875743-CDS-F-serratus_M_contig622:197897..1980451622931927.875743-CDS-F-serratus_M_contig622:197897..198045Fucus serratus maleCDSF-serratus_M_contig622 197898..198045 +
1690964061.4270833-CDS-F-serratus_M_contig622:197897..1980451690964061.4270833-CDS-F-serratus_M_contig622:197897..198045Fucus serratus maleCDSF-serratus_M_contig622 197898..198045 +
1622931927.903693-CDS-F-serratus_M_contig622:198427..1985391622931927.903693-CDS-F-serratus_M_contig622:198427..198539Fucus serratus maleCDSF-serratus_M_contig622 198428..198539 +
1690964061.4381583-CDS-F-serratus_M_contig622:198427..1985391690964061.4381583-CDS-F-serratus_M_contig622:198427..198539Fucus serratus maleCDSF-serratus_M_contig622 198428..198539 +
1622931927.9267662-CDS-F-serratus_M_contig622:198840..1989341622931927.9267662-CDS-F-serratus_M_contig622:198840..198934Fucus serratus maleCDSF-serratus_M_contig622 198841..198934 +
1690964061.4492064-CDS-F-serratus_M_contig622:198840..1989341690964061.4492064-CDS-F-serratus_M_contig622:198840..198934Fucus serratus maleCDSF-serratus_M_contig622 198841..198934 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig622.17058.1prot_F-serratus_M_contig622.17058.1Fucus serratus malepolypeptideF-serratus_M_contig622 195770..198934 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig622.17058.1

>prot_F-serratus_M_contig622.17058.1 ID=prot_F-serratus_M_contig622.17058.1|Name=mRNA_F-serratus_M_contig622.17058.1|organism=Fucus serratus male|type=polypeptide|length=273bp
MEGQEGQEYQPRPWEMWEPAGGPNAEKPARIVNGRMKDAGNSYVVMFKYG
SVVFLHFNQSQQEEHLRRQRDFLYKEDKIMPADVKTETHGVALWSTLPEP
ARLEPDCTTLRELDVNHITIIGTVLGQTVALDHYGDLVDSMMAKFSAINS
GVEKTGMFSGSQKTELFQLVARNNTVRTDVISKLGILERSEAAWKHQDYN
YVWEGLREEFEMDSRLKTLESKLSMLQQNTNFFIEMLHNQKSTMLEWTII
VLIGAEIVVGVCDLLNFKPFAK*
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mRNA from alignment at F-serratus_M_contig622:195711..200065+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig622.17058.1 ID=mRNA_F-serratus_M_contig622.17058.1|Name=mRNA_F-serratus_M_contig622.17058.1|organism=Fucus serratus male|type=mRNA|length=4355bp|location=Sequence derived from alignment at F-serratus_M_contig622:195711..200065+ (Fucus serratus male)
GAACGGGAAAGCTCACGGGCCCCCAACGTCGACCCTTCGCGAGCCCGCCA TATTTTACGATGGAAGGTCAGGAAGGTCAGGAGTACCAACCTCGACCGTG GGAAATGTGGGAGCCAGCGGGTGGCCCGAATGCTGAGAAGCCGGCGCGTA TTGTCAATGGAAGGATGAAGGACGCCGGCAACAGCTACGTCGTGATGTTC AAATACGGTAGTGTGGTGTTCCTGCACTTCAATCAGTCGCAGCAGGAGGT AGGTGAGGGGAGATTTTGTATTTTTGAGAGAGGTGGGAGCTCGAATGCGT GGGGGGAAGGTGTTGAGTGGGCATCTGCTGGGTGTGCTGCTCGCGCCGAC TCTCGTGGGGTTCTTGTGTCACAATTTCGTCGTCCTAGTTGTCATGCAAT GACCAATGCCGCTTGCGGTCTGCTGAATAGGCGGGATACTGTAATGCAGT AAGCCATAGTAGACGTGACTCGCACAATGGGTTTTCATTGTGATCCTCCT TTCCTTGGCCCCGTTTTAAGCCGTAGTATAAGTCTCGCATCATCGTCTCT CTGCTTATCTACGCGAAAGGGATACCTGTTGCGATTCACAGCGGGCTCCT TGTCATCCTCCTTTTTTCCGCGGTCGCGCCTCAAGCGTTACAAAAAACAC GTAGGCGTGTTACAAGTGGACCCGCCAGTAGTTAGAATACTTTCTCGCGT TTGTTTTTCCGGGTTGGCCACGGCGGAGTAGAAAGAAGGCAACAAATATG CAGGCGCGCGACATGCCGAATCGGAGGCATATGACGAGTACGACTAAGGG TTCAAAGGTTAAAGTCGGTGAGATTTTCAAGGGTCGTTAAAGTCGCACGA GCGCGGGGCGCGAACGTTGTCTCTTTCAGCAGCTGAGGTATGGAGCATTT TCTTGTGTTCTCTCTTGTACGGGACCAAGACCAGCCCTACCTGCCGCGTC GGGAAGAACGTGGCCTGCCAGAAAGGCCGCAATCAGAAAGCCGCAGCTTT CCAGCTCAAGCAGCACCTCGTTTACATATTCCTTTGTTGGGTGTTTTTCT CTTAGGTATTTGAGCTTGATTTTGCTCGGGTGGAAATGAGATGACCCTCC GCGCTGAGCACGGCCATAAAGACAGAACATTATGCCCTCCTTTCGACCTA GGATCCCAGTTGACTTTGCTCGCCCTCCCGCCCGCTCCAATCGCTGCCTA AACAATGCTAGGAGCACCTGCGGCGACAGCGAGATTTTTTGTACAAGGAA GACAAAATCATGCCAGCTGATGTCAAGACCGAGACGCATGGCGTGGCGTT GTGGTCAACTTTGCCCGAGCCGGCAAGGTGTGATGTGGTGCGCGACCACG GGACAACCCCACTGTAGAATGCCGGTAAAGGAAGGCGGACACCTTCGATC TGGAAACTACCGAACCTTTTGTTATGACGTGAAACTCCAAAATCTCCACC ACTCGACCCCTGCGTTGTGCCCCAGCCTAACGTATCGTTTCCGTGGACCT ACCGATACCAGGCTAGAACCGGATTGCACGACGTTGAGAGAGCTGGACGT CAACCACATAACCATAATCGGGACTGTGCTTGGCCAGGTGCGTGCGCACG ACACAGCTCGTTCCCGCGCCCGCAAGGGGTTGGACTCTAGACGTTGGCGT TTTTTTTTTTATCTCGCCAAAATATTGCTCTTTTCACGCTCTTTTCCGAG CGTGATCTGTCTCTCTACCCAGCAGCTCAAATACTGGTGGTTCTTGGGGG GGGGGGGTTCTCTCGATGTGCGAGCCACCGTGACGAAAACGCACGCCATG CTTGTAGAAACCTTTCCCTGCTCATATCCTGACGCCGCCTCGTAACCACT CACAGACGGTGGCACTCGATCACTACGGCGATCTAGTCGATTCGATGATG GCCAAGTTCTCCGCCATCAACAGTGGCGTGGAGAAAACGGTGAGGAGAAG CTCGCCCGCGCCTATAGCCGTCGCCCACGTCTCTTGCAGTCATGTTTGCT ATTATAACTACTTACCGCAAATGGCATGCGGTTTTTTATGTACACCATGT GAAGATTTTCTCCAACAACGGTAGACCTGACAGCATTTCTTTTTCAAGCA AGAGACGAGTTTTGTCGGCTGTGAAACTGTTTGATTGCTGTGTCGATTGC AAAAGTTTCGTGCCCGATAATGCCGTGTGTACGTCAGGGAATGTTTTCCG GGTCGCAAAAGACGGAGCTGTTTCAGTTGGTGGCTAGAAATAACACCGTG CGGACAGACGTTATCTCCAAGCTTGGTATCCTGGAACGGTCGGAGGCGGC TTGGAAGCACCAGGATTATAACTACGTATGGGAGGGTGAGAACCATCGCG GAGCGAAGGTGCACGCCGGTGGAGGAGCCCTTTCGTTGTTTCCAATGACA TTATACTGATTCTTTTCTCGAGCAAGCTTTTCGCGTCATTTTGTTTTTTG TTTTTTGGTCGAAGCCATGTGGAACCGCTTTTGCGCGGATGTTCTCTGGC GTTGGAGTAAGAATCAATCCTCGAAAGGCATTTGAAGAGTATATTTCTAT CCGGGAACTCAAAACGAATCCGAGAACGAGCATGGCTCGCCTATCTGTCC CAACCTGTTGGTGTTCCATTAATACATCCACAAGAAGGCCGAGACAAGGT AGATATTAATATTATAGGTTTGTTGACTCCGCTTGCACCTTCGCGTCTAC CGCATGGGCGTCAACAGGACTCAGGGAAGAGTTCGAGATGGACAGTCGCC TCAAGACGCTAGAGTCGAAGCTCAGTATGTTGCAGCAGAACACCAACTTC TTCATCGAGATGTTGCACAACCAGAAGAGGCGAGTTCAGATTTTGACGTT ATTTTTAGACGGGGGTGATTTTCTGAATCCCGTGTGGTCGTCTCGAAAGG GGGTAGGTAGAGCGCTCTCCACTGAGGGTGGCGCACTAAACTTTTTTCTT GTTCGTTGTATACCTTTTATCTCAAGGCAATAAGGCTCCTCAGCCCTAGG CTATTACATTACTCCAATCATTTTCGGACGCCCTTAACCCTTTTCTCAAT CATGCGGTCTACTCTTTTTTGCCTCGTCCGTCCGCCATTGGCCTTTGGTT GCTTCTGTTTTTCGGCCGGACTACACGCAGTACCATGCTGGAGTGGACCA TCATCGTCCTGATTGGCGCGGAGATCGTTGTCGGCGTGTGTGACCTTTTG AATTTTAAACCCTTCGCGAAATGAAAAAGGGGGAGGATTTAGTTCCGCGG AGGACTTGCCTTCCGTGGCGTGTGGTGCGGCAATAAAGGAAGGCAGGAGC AGGAGCAATTGTGAATAGCCCAGGTTGAAGCGTGGAGCCCGCTATCTCCT TGTGATACTTCGAAGAAATATCGTCTCTTGTGGCGTACGATAGGTACTAT CCTAGGACTGTAGTATTGCTAGGTGTCTCTAAATGAGCCTGTTCGACAAA CTAATTCTCTCGTTTCATCTATCTATTGGTGCGATGTATGTAGCGTACCA GTACCTACCTTAACTCTACTGACGGCCCTTCGTTTATGAAGGGATTTGTT AGTGTAAGTCTAGCTCCACCCATGCGAGGGATGTGGCGTAAGTGTTCATC CACGGCGGCCTTTCTCAGCGACTTCAGATGTTGCTGATCTAGGACTTATC AAGTGGGCCGCCGTATGACACTTTTTTCAAGAAATGGCTGAATTTGGTCA CCCCGCACGAGTGGCGGTTACGATTTTCGGAGAAAACGTGATACGAACGA ATGGATGGAGCCGAGTGTTACTGATCGTGCGAAAGGATCTTTAGGGGGTT CGGGGGTGGGGATTCTGGTTTTGTCCAGGTCGCTAAACCAGATCCCCTAC CCCAGCTGACCGCGTGGTCCCAATTCATGGCTGGCGCTTGGTCATAGTAC CCTTTTGGCTGGTTTCGTGTACGTCTCTACCCAATCTGAGAAGTGAATAT CCTTTGACAGTGTGCTCGTTTTGTGTGCGTTTCTTTACCCAATCAGGAGT CAAAGATCCTTTCGCACGGATGGTAGTATGTACTGAATGGATGGGAGTGA GAATTCTTGCACGACTAGCAAAAAGGACGGGGGAGAATGAAAATAGACCC TTCATCGCTTTAGAGCTTCCCCAGATTGCGATGTTGCATCCCAGGAGACT GATTTCGGAAAGTTCCTCAGACGACTTAGCACAGGACAAGACAGGACAGC ATTATATTCGAACCGCTGTAGGCTCTCAGTTCGAACGATGTCTTGGGCCT TACCCAGACCAAATGTAGGAGTTTTGTATTTTTATGGAATGCTCACTTAA CAGGTACATGTGGTGTTACTCGTCTTTTTGAGTTATAACGTATTTTGCGG AGGGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig622:195711..200065+

>mRNA_F-serratus_M_contig622.17058.1 ID=mRNA_F-serratus_M_contig622.17058.1|Name=mRNA_F-serratus_M_contig622.17058.1|organism=Fucus serratus male|type=CDS|length=1638bp|location=Sequence derived from alignment at F-serratus_M_contig622:195711..200065+ (Fucus serratus male)
ATGGAAGGTCAGGAAGGTCAGGAGTACCAACCTCGACCGTGGGAAATGTG
GGAGCCAGCGGGTGGCCCGAATGCTGAGAAGCCGGCGCGTATTGTCAATG
GAAGGATGAAGGACGCCGGCAACAGCTACGTCGTGATGTTCAAATACGGT
AGTGTGGTGTTCCTGCACTTCAATCAGTCGCAGCAGGAGATGGAAGGTCA
GGAAGGTCAGGAGTACCAACCTCGACCGTGGGAAATGTGGGAGCCAGCGG
GTGGCCCGAATGCTGAGAAGCCGGCGCGTATTGTCAATGGAAGGATGAAG
GACGCCGGCAACAGCTACGTCGTGATGTTCAAATACGGTAGTGTGGTGTT
CCTGCACTTCAATCAGTCGCAGCAGGAGGAGCACCTGCGGCGACAGCGAG
ATTTTTTGTACAAGGAAGACAAAATCATGCCAGCTGATGTCAAGACCGAG
ACGCATGGCGTGGCGTTGTGGTCAACTTTGCCCGAGCCGGCAAGGAGCAC
CTGCGGCGACAGCGAGATTTTTTGTACAAGGAAGACAAAATCATGCCAGC
TGATGTCAAGACCGAGACGCATGGCGTGGCGTTGTGGTCAACTTTGCCCG
AGCCGGCAAGGCTAGAACCGGATTGCACGACGTTGAGAGAGCTGGACGTC
AACCACATAACCATAATCGGGACTGTGCTTGGCCAGGCTAGAACCGGATT
GCACGACGTTGAGAGAGCTGGACGTCAACCACATAACCATAATCGGGACT
GTGCTTGGCCAGACGGTGGCACTCGATCACTACGGCGATCTAGTCGATTC
GATGATGGCCAAGTTCTCCGCCATCAACAGTGGCGTGGAGAAAACGACGG
TGGCACTCGATCACTACGGCGATCTAGTCGATTCGATGATGGCCAAGTTC
TCCGCCATCAACAGTGGCGTGGAGAAAACGGGAATGTTTTCCGGGTCGCA
AAAGACGGAGCTGTTTCAGTTGGTGGCTAGAAATAACACCGTGCGGACAG
ACGTTATCTCCAAGCTTGGTATCCTGGAACGGTCGGAGGCGGCTTGGAAG
CACCAGGATTATAACTACGTATGGGAGGGGAATGTTTTCCGGGTCGCAAA
AGACGGAGCTGTTTCAGTTGGTGGCTAGAAATAACACCGTGCGGACAGAC
GTTATCTCCAAGCTTGGTATCCTGGAACGGTCGGAGGCGGCTTGGAAGCA
CCAGGATTATAACTACGTATGGGAGGGACTCAGGGAAGAGTTCGAGATGG
ACAGTCGCCTCAAGACGCTAGAGTCGAAGCTCAGTATGTTGCAGCAGAAC
ACCAACTTCTTCATCGAGATGTTGCACAACCAGAAGAGGACTCAGGGAAG
AGTTCGAGATGGACAGTCGCCTCAAGACGCTAGAGTCGAAGCTCAGTATG
TTGCAGCAGAACACCAACTTCTTCATCGAGATGTTGCACAACCAGAAGAG
TACCATGCTGGAGTGGACCATCATCGTCCTGATTGGCGCGGAGATCGTTG
TCGGCGTGTGTGACCTTTTGAATTTTAAACCCTTCGCGAAATGATACCAT
GCTGGAGTGGACCATCATCGTCCTGATTGGCGCGGAGATCGTTGTCGGCG
TGTGTGACCTTTTGAATTTTAAACCCTTCGCGAAATGA
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