mRNA_F-serratus_M_contig6214.17048.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6214.17048.1 vs. uniprot
Match: A0A6H5L9I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9I0_9PHAE) HSP 1 Score: 192 bits (487), Expect = 6.380e-60 Identity = 98/133 (73.68%), Postives = 111/133 (83.46%), Query Frame = 1
Query: 1 MSAAGSASRVAERKNLNDFEKAEVIRHLLAGSKDGVLKRGAYKATAEEFGCEWQSIERLWRKYDEQHQAGVAHPQLANGREGKSGRKGIPIEELRARLRDIPLNDRTTQRSLATALGITQATLHNNLKALGLR 399
MSAAGSAS+VA+RKN N+ EK EVIRHLL GSK+GVL GA+KA AE+FGC W++ +RLWR+YD QH+AGV+ PQLAN R G SGRKG+PIEELR RLRDIPLNDRTTQR LA AL I TLH NLKALGLR
Sbjct: 1 MSAAGSASQVAKRKNFNNSEKEEVIRHLLTGSKNGVLPYGAFKAAAEKFGCHWETNKRLWRRYDTQHKAGVSSPQLANRRNGNSGRKGVPIEELRERLRDIPLNDRTTQRRLAAALEIPLTTLHKNLKALGLR 133
BLAST of mRNA_F-serratus_M_contig6214.17048.1 vs. uniprot
Match: A0A6H5KHK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK2_9PHAE) HSP 1 Score: 170 bits (431), Expect = 5.180e-52 Identity = 87/133 (65.41%), Postives = 108/133 (81.20%), Query Frame = 1
Query: 1 MSAAGSASRVAERKNLNDFEKAEVIRHLLAGSKDGVLKRGAYKATAEEFGCEWQSIERLWRKYDEQHQAGVAHPQLANGREGKSGRKGIPIEELRARLRDIPLNDRTTQRSLATALGITQATLHNNLKALGLR 399
M AAGSAS+VA+RKN N+ E EVIR+LL GSK+GVL+ GA+K E+FG W++I+RLW +YD QH+AGVA PQ+ N R+G SGR+GIP+EEL+ R RDIPLN+RTTQR LA AL I ++TLH NLKALGLR
Sbjct: 1 MPAAGSASQVAKRKNFNEEETEEVIRYLLPGSKNGVLRYGAFKEAGEKFGWYWETIKRLWMRYDTQHKAGVASPQIDNRRKGNSGRQGIPLEELKERPRDIPLNERTTQRRLAAALVIPKSTLHRNLKALGLR 133
BLAST of mRNA_F-serratus_M_contig6214.17048.1 vs. uniprot
Match: A0A6H5K5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M0_9PHAE) HSP 1 Score: 155 bits (393), Expect = 3.970e-46 Identity = 78/133 (58.65%), Postives = 101/133 (75.94%), Query Frame = 1
Query: 1 MSAAGSASRVAERKNLNDFEKAEVIRHLLAGSKDGVLKRGAYKATAEEFGCEWQSIERLWRKYDEQHQAGVAHPQLANGREGKSGRKGIPIEELRARLRDIPLNDRTTQRSLATALGITQATLHNNLKALGLR 399
MSAAGSAS+ +RKN N E+ EVIRHLLA S+DGVL+ GAY+ AE++GC W++I+ +W K++++ AG + N R+G SGRKGI +E+LR RLRDIPLN+RTTQR LA ALGI Q TL NL+ LGL+
Sbjct: 1 MSAAGSASQGTKRKNFNALEREEVIRHLLANSEDGVLRHGAYQEAAEKYGCSWKTIKGVWAKHEQREAAGDPSAYIGNNRKGNSGRKGIDLEDLRTRLRDIPLNERTTQRRLAAALGIPQPTLFRNLEKLGLK 133
BLAST of mRNA_F-serratus_M_contig6214.17048.1 vs. uniprot
Match: A0A6H5KRW0_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW0_9PHAE) HSP 1 Score: 152 bits (385), Expect = 3.680e-44 Identity = 77/133 (57.89%), Postives = 104/133 (78.20%), Query Frame = 1
Query: 1 MSAAGSASRVAERKNLNDFEKAEVIRHLLAGSKDGVLKRGAYKATAEEFGCEWQSIERLWRKYDEQHQAGVAHPQLANGREGKSGRKGIPIEELRARLRDIPLNDRTTQRSLATALGITQATLHNNLKALGLR 399
MSAAGSAS+ +RKN N E+ EV+R+LLA S+DGV + G+Y AE++GC W++I+R+W+K++++ ++G + N R+G SG KGI IE LRARL +IPLN+RTTQR LA ALGI ++TLHNNLKALGLR
Sbjct: 1 MSAAGSASQGLKRKNFNVSEREEVVRYLLADSEDGVRQHGSYHRAAEKYGCHWETIKRIWQKHEKREESGDPSLYIGNDRKGHSGCKGIDIENLRARLLEIPLNERTTQRRLAAALGIPKSTLHNNLKALGLR 133
BLAST of mRNA_F-serratus_M_contig6214.17048.1 vs. uniprot
Match: A0A6H5KLV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV4_9PHAE) HSP 1 Score: 152 bits (385), Expect = 9.660e-43 Identity = 77/133 (57.89%), Postives = 104/133 (78.20%), Query Frame = 1
Query: 1 MSAAGSASRVAERKNLNDFEKAEVIRHLLAGSKDGVLKRGAYKATAEEFGCEWQSIERLWRKYDEQHQAGVAHPQLANGREGKSGRKGIPIEELRARLRDIPLNDRTTQRSLATALGITQATLHNNLKALGLR 399
MSAAGSAS+ +RKN N E+ EV+R+LLA S+DGV + G+Y AE++GC W++I+R+W+K++++ ++G + N R+G SG KGI IE LRARL +IPLN+RTTQR LA ALGI ++TLHNNLKALGLR
Sbjct: 1 MSAAGSASQGLKRKNFNVSEREEVVRYLLADSEDGVRQHGSYHRAAEKYGCHWETIKRIWQKHEKREESGDPSLYIGNDRKGHSGCKGIDIENLRARLLEIPLNERTTQRRLAAALGIPKSTLHNNLKALGLR 133
BLAST of mRNA_F-serratus_M_contig6214.17048.1 vs. uniprot
Match: A0A6H5KBK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBK8_9PHAE) HSP 1 Score: 105 bits (263), Expect = 1.850e-26 Identity = 54/78 (69.23%), Postives = 63/78 (80.77%), Query Frame = 1
Query: 166 IERLWRKYDEQHQAGVAHPQLANGREGKSGRKGIPIEELRARLRDIPLNDRTTQRSLATALGITQATLHNNLKALGLR 399
+RLW +Y+ Q +AGVA P++ N R+G SGRKGIPI+ELR RLRDIPLNDRTTQR LA ALGI TL +NLKALGLR
Sbjct: 17 FKRLWVRYEAQRKAGVARPKIGNLRKGNSGRKGIPIQELRERLRDIPLNDRTTQRRLAAALGIATTTLFDNLKALGLR 94
BLAST of mRNA_F-serratus_M_contig6214.17048.1 vs. uniprot
Match: A0A6H5JEL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL2_9PHAE) HSP 1 Score: 106 bits (264), Expect = 5.380e-26 Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 184 KYDEQHQAGVAHPQLANGREGKSGRKGIPIEELRARLRDIPLNDRTTQRSLATALGITQATLHNNLKALGLR 399
+YD QH+AGVA PQ+ N R+G SGRKGIP+EEL+ RLRDIPLNDRTTQR LA ALGI ++TLH NLK LGLR
Sbjct: 2 RYDTQHKAGVASPQIENRRKGNSGRKGIPLEELKERLRDIPLNDRTTQRRLAAALGIPKSTLHRNLKVLGLR 73
BLAST of mRNA_F-serratus_M_contig6214.17048.1 vs. uniprot
Match: A0A6H5JAZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ0_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 2.730e-22 Identity = 51/72 (70.83%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 184 KYDEQHQAGVAHPQLANGREGKSGRKGIPIEELRARLRDIPLNDRTTQRSLATALGITQATLHNNLKALGLR 399
+Y QH+AGVA P++ N R G SGRKGIP+EELR RLRDIPLN RTTQR LA ALGI ++TLH N KALGLR
Sbjct: 2 RYYTQHKAGVASPKIENRRMGNSGRKGIPLEELRERLRDIPLN-RTTQRRLAAALGIPKSTLHRNPKALGLR 72
BLAST of mRNA_F-serratus_M_contig6214.17048.1 vs. uniprot
Match: A0A225WYZ1_9STRA (Mariner Transposase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYZ1_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.520e-12 Identity = 36/113 (31.86%), Postives = 63/113 (55.75%), Query Frame = 1
Query: 37 RKNLNDFEKAEVIRHLLAGSKDGVLKRGAYKATAEEFGCEWQSIERLWRKYDEQHQAGVAHPQLANGREGKSGRKGIPIEELRARLRDIPLNDRTTQRSLATALGITQATLHN 375
+ +L+D + ++ HLL S G L RGA + A +F +++R+W +Y++ AG +++ +G SGRKG EL A++R +P+ RT R A +LG++ + N
Sbjct: 3 KSSLDDSTRRAILLHLLIASTGGELPRGAKTSAATKFNVHRHTVDRIWSRYNDSVAAGDLSGDVSSRYKGNSGRKGYDRVELAAKIRSVPVEQRTNYRQTAKSLGLSVGLIFN 115
BLAST of mRNA_F-serratus_M_contig6214.17048.1 vs. uniprot
Match: A0A6H5J767_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J767_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 6.200e-12 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 1
Query: 1 MSAAGSASRVAERKNLNDFEKAEVIRHLLAGSKDGVLKRGAYKATAEEFGCEWQSIERL 177
MSAAGSAS+V +R N E EVIR+LLAGSK+ VL+ GA+K E FGC W++I+RL
Sbjct: 1 MSAAGSASQVEKR---NKEESEEVIRYLLAGSKNRVLRYGAFKEAGETFGCHWETIKRL 56 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6214.17048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6214.17048.1 >prot_F-serratus_M_contig6214.17048.1 ID=prot_F-serratus_M_contig6214.17048.1|Name=mRNA_F-serratus_M_contig6214.17048.1|organism=Fucus serratus male|type=polypeptide|length=134bp MSAAGSASRVAERKNLNDFEKAEVIRHLLAGSKDGVLKRGAYKATAEEFGback to top mRNA from alignment at F-serratus_M_contig6214:28338..28739+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6214.17048.1 ID=mRNA_F-serratus_M_contig6214.17048.1|Name=mRNA_F-serratus_M_contig6214.17048.1|organism=Fucus serratus male|type=mRNA|length=402bp|location=Sequence derived from alignment at F-serratus_M_contig6214:28338..28739+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6214:28338..28739+ >mRNA_F-serratus_M_contig6214.17048.1 ID=mRNA_F-serratus_M_contig6214.17048.1|Name=mRNA_F-serratus_M_contig6214.17048.1|organism=Fucus serratus male|type=CDS|length=804bp|location=Sequence derived from alignment at F-serratus_M_contig6214:28338..28739+ (Fucus serratus male)back to top |