mRNA_F-serratus_M_contig619.16991.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig619.16991.1 vs. uniprot
Match: D7FQ13_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ13_ECTSI) HSP 1 Score: 266 bits (680), Expect = 4.740e-89 Identity = 126/159 (79.25%), Postives = 146/159 (91.82%), Query Frame = 1
Query: 4 VFVLKVKCELENVESMKANDNNKWIMTVQSPDESDRREHVEVTRARIEELDGTRGTANFVVKWKGSKKQATANIVDIKKVTTKGEIKGEQSGEFVPILALDCRGLEPVEWHPSTDFAATSGGGTVFECDAVDLSEGDWSEYCEKSSMPLSIMEIEHRFE 480
VFVLKVKCEL+NV SM+A++NNKWI+T+QSPD +RREHVEVT+AR EELDG+RGTANFVVKW+G+KKQATANIV+IKKVTT+G IKG+QSGEFVPI ALDCRGLEP+EWHPSTDFA TS GGTV+ D VDLSE DWS+YCEKS+ P+SIMEIEH+FE
Sbjct: 3 VFVLKVKCELDNVASMQADENNKWILTMQSPDAGERREHVEVTKARNEELDGSRGTANFVVKWQGAKKQATANIVEIKKVTTQGLIKGDQSGEFVPIFALDCRGLEPIEWHPSTDFAVTSEGGTVYASDGVDLSEEDWSDYCEKSAAPISIMEIEHKFE 161
BLAST of mRNA_F-serratus_M_contig619.16991.1 vs. uniprot
Match: A0A7S3HIK3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIK3_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.230e-38 Identity = 68/158 (43.04%), Postives = 104/158 (65.82%), Query Frame = 1
Query: 7 FVLKVKCELENVESMKANDNNKWIMTVQSPDESDRREHVEVTRARIEELDGTRGTANFVVKWKGSKKQATANIVDIKKVTTKGEIKGEQSGEFVPILALDCRGLEPVEWHPSTDFAATSGGGTVFECDAVDLSEGDWSEYCEKSSMPLSIMEIEHRFE 480
+VLK+K +LEN++ + +N W +T+QS D D +E V +++ + EL+G+RG ANF++KW G+K+QA IVDIK VT G +Q+G++V +L L+CRG+ P W DF A S GG FE VDL++GDW+EY E++ +S+ +E + E
Sbjct: 33 YVLKIKADLENIKQLIPLPDNHWELTIQSADGCDTKEGVTISKGDVMELEGSRGDANFIMKWPGNKQQAYIKIVDIKGVT--GNYTEDQAGKWVTVLGLECRGIVPTAWKVGRDFIAESSGGPFFE--DVDLADGDWAEYDEENDASVSVTNVESKVE 186
BLAST of mRNA_F-serratus_M_contig619.16991.1 vs. uniprot
Match: A0A2D4BGF5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGF5_PYTIN) HSP 1 Score: 133 bits (334), Expect = 1.090e-36 Identity = 67/160 (41.88%), Postives = 108/160 (67.50%), Query Frame = 1
Query: 4 VFVLKVKCELENVESMKANDNNKWIMTVQSPDESDRREHVEVTRARIEELDGTRGTANFVVKWKGSKKQATANIV-DIKKVTTKGEIKGEQSGEFVPILALDCRGLEPVEWHPSTDFAATSGGGT-VFECDAVDLSEGDWSEYCEKSSMPLSIMEIEHRF 477
+FVL VK +LENVE+++A +++W + V+ + + RE V V+ + ++DG+RG +FV+KW G+KKQ+ +V D+KK+T ++GE SGEFVP + +CRGLEP+ WHP + + TS GG+ VFE VDL++ DW++Y + + + +EH+F
Sbjct: 3 LFVLYVKADLENVETLEAPQHHRWCIDVKESNGDEVREAVVVSDEELIDVDGSRGEVHFVLKWPGAKKQSQLTVVRDVKKLTR--AVRGEDSGEFVPFVGFECRGLEPIAWHPGSGYTVTSAGGSAVFE--DVDLAD-DWADYDGEGEQSVGVYSVEHKF 157
BLAST of mRNA_F-serratus_M_contig619.16991.1 vs. uniprot
Match: A0A7S2Y364_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y364_9STRA) HSP 1 Score: 131 bits (329), Expect = 6.230e-36 Identity = 63/156 (40.38%), Postives = 104/156 (66.67%), Query Frame = 1
Query: 4 VFVLKVKCELENVESMKANDNNKWIMTVQSPDESDRREHVEVTRARIEELDGTRGTANFVVKWKGSKKQATANIVDIKKVTTKGEIKGEQSGEFVPILALDCRGLEPVEWHPSTDFAATSGGGTVFECDAVDLSEGDWSEYCEKSSMPLSIMEIEH 471
VF+L+VK LENV M + +W + +++P +D RE+V ++ L G+RGTA+F V+W G++ A A+++++K V + + + S ++VP+ AL+CRGLEP++W P+ +F+ S GG F VDLSEGDW+++ +++ +SIMEIEH
Sbjct: 3 VFILRVKASLENVGQMSVVEGTQWCLKIKNPTGTDIRENVFISDTESYNLPGSRGTAHFTVRWDGARAPAHASLIEVKNVL-RPCLTADDSDQWVPVAALECRGLEPIDWSPTENFSVESTGGNNFG--VVDLSEGDWADFDDEAGESVSIMEIEH 155
BLAST of mRNA_F-serratus_M_contig619.16991.1 vs. uniprot
Match: D8U951_VOLCA (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=D8U951_VOLCA) HSP 1 Score: 130 bits (327), Expect = 1.330e-35 Identity = 68/160 (42.50%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 4 VFVLKVKCELENVESMKANDNNKWIMTVQSPDESDRREHVEVTRARIEELDGTRGTANFVVKW-KGSKKQATANIVDIKKVTTKGEIKGEQSGEFVPILALDCRGLEPVEWHPSTDFAATSGGGTVFECDAVDLSEGDWSEYCEKSSMPLSIMEIEHRFE 480
VF+L ++ ELENVES+ ++ + + V+ S+ ++ V VT EL G++GTAN V+K+ KGSKK+A+ N+ +IK VT + G+FVPI+A +CRGL+P+ +HP D+ S GGT + D VDL E +WS+YCEK++ + I E +FE
Sbjct: 3 VFLLSIRAELENVESLSIPSSSHFCLDVKESAGSEEKKGVYVTSTEQHELSGSKGTANLVMKFAKGSKKEASINVQEIKGVTR--PYTADDDGKFVPIIAFECRGLDPIAFHPEGDWRVVSAGGTKY--DNVDLKEAEWSDYCEKAAASVGIYNFESKFE 158
BLAST of mRNA_F-serratus_M_contig619.16991.1 vs. uniprot
Match: A0A1D2AE71_AUXPR (Uncharacterized protein (Fragment) n=4 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AE71_AUXPR) HSP 1 Score: 129 bits (325), Expect = 3.760e-35 Identity = 67/161 (41.61%), Postives = 105/161 (65.22%), Query Frame = 1
Query: 4 VFVLKVKCELENVESMKANDNNKWIMTVQSPDESDRREHVEVTRARIEELDGTRGTANFVVKW-KGSKKQATANIVDIKKVTTKGEIKGEQSGEFVPILALDCRGLEPVEWHPSTDFAATSGGGTVFECDAVDLSEGDWSEYCEKSSMPLSIMEIEHRFET 483
VF L +K +LEN+ES+ +++ + +TV+ D+RE V V+R +EL G+RGTA+F +KW + ++ +A+ ++ IK VT + +G+FVPI+A +CRGL+P+ W P F + G V+E VDLS G+W+EY EKS +S+ME+E RF+T
Sbjct: 14 VFTLSIKADLENIESISLPEDSSYTLTVKDSAGDDQREGVVVSRLEEQELSGSRGTAHFALKWSRDARHEASLSLQHIKGVTR--ALTAADAGKFVPIVAFECRGLDPIAWQPQDGFVIRAPSGMVWE--DVDLSSGEWAEYDEKSGEAVSVMELEWRFDT 170
BLAST of mRNA_F-serratus_M_contig619.16991.1 vs. uniprot
Match: A0A2K3DD74_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DD74_CHLRE) HSP 1 Score: 128 bits (322), Expect = 7.330e-35 Identity = 65/159 (40.88%), Postives = 102/159 (64.15%), Query Frame = 1
Query: 7 FVLKVKCELENVESMKANDNNKWIMTVQSPDESDRREHVEVTRARIEELDGTRGTANFVVKW-KGSKKQATANIVDIKKVTTKGEIKGEQSGEFVPILALDCRGLEPVEWHPSTDFAATSGGGTVFECDAVDLSEGDWSEYCEKSSMPLSIMEIEHRFE 480
F+L ++ EL+NV+++ W + V+ S+ ++ V VT EL+G++GTAN V+K+ KGSKK+++ N+++IK VT + G+FVPI+A +CRGLEP+ +HP D+ S GGT + D VDL E +WS+YCEK++ + I E +FE
Sbjct: 4 FLLCIRAELDNVDTISIPSTTHWCLDVKESAGSEEKKGVYVTSTEEHELNGSKGTANLVMKFAKGSKKESSVNVLEIKGVTR--PYTADDDGKFVPIIAFECRGLEPIAFHPEGDWHVVSSGGTKY--DNVDLKENEWSDYCEKAAASVGIYSFESKFE 158
BLAST of mRNA_F-serratus_M_contig619.16991.1 vs. uniprot
Match: A0A6G0WCE5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCE5_9STRA) HSP 1 Score: 128 bits (322), Expect = 7.770e-35 Identity = 69/160 (43.12%), Postives = 102/160 (63.75%), Query Frame = 1
Query: 4 VFVLKVKCELENVESMKANDNNKWIMTVQSPDESDRREHVEVTRARIEELDGTRGTANFVVKWKGSKKQATANIV-DIKKVTTKGEIKGEQSGEFVPILALDCRGLEPVEWHPSTDFAATSGGGTVFECDAVDLSEGDWSEYCEKSSMPLSIMEIEHRFE 480
+ VL VK +L+NV+ + +++W + ++ P ++RE V V EE+ G+RGTA+F++KW G+KK++ +V D+KK+T I GE SGE+VP++ DCRGLEPV W P + TS GGT D V+L+E DWS+Y E + I IEH+FE
Sbjct: 3 LHVLYVKADLDNVDLWEFPPHHRWCLDIKEPTSDEKREGVWVCDDEEEEVSGSRGTAHFLMKWPGAKKESQLTVVRDVKKLTR--PITGEDSGEWVPVVGFDCRGLEPVAWSPEGGYKITSAGGTAVFQD-VNLAE-DWSDYDEDGGQAVGIYAIEHKFE 158
BLAST of mRNA_F-serratus_M_contig619.16991.1 vs. uniprot
Match: A0A0F7UH75_NEOCL (C1orf123, related n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=A0A0F7UH75_NEOCL) HSP 1 Score: 127 bits (320), Expect = 1.350e-34 Identity = 64/159 (40.25%), Postives = 103/159 (64.78%), Query Frame = 1
Query: 4 VFVLKVKCELENVESMKANDNNKWIMTVQSPDESDRREHVEVTRARIEELDGTRGTANFVVKWKGSKKQATANIVDIKKVTTKGEIKGEQSGEFVPILALDCRGLEPVEWHPSTDFAATSGGGTVFECDAVDLSEGDWSEYCEKSSMPLSIMEIEHRFE 480
V VL++K ELENVES++ + W++ V+ P D RE V V+ + +E+ +RGTANF+V+W GSK+ +T N+ D+K VT + E SG+FVP++A +CRG+EPV+W+P+ + S T + V+LSE DW +Y + +++ + I +E F+
Sbjct: 3 VIVLRMKAELENVESVEIPAGHTWVLDVKQPAGEDVRERVTVSESETQEIPNSRGTANFLVRWDGSKQTSTLNVQDVKNVTRR-TYTAEDSGKFVPVVAFECRGVEPVKWYPADGYVVKSKKATFRD---VELSE-DWVDYDQDANLSVGIYNVEWEFQ 156
BLAST of mRNA_F-serratus_M_contig619.16991.1 vs. uniprot
Match: A0A2A9M4L8_9APIC (DUF866 domain-containing protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M4L8_9APIC) HSP 1 Score: 127 bits (319), Expect = 1.910e-34 Identity = 64/161 (39.75%), Postives = 102/161 (63.35%), Query Frame = 1
Query: 4 VFVLKVKCELENVESMKANDNNKWIMTVQSPDESDRREHVEVTRARIEELDGTRGTANFVVKWKGSKKQATANIVDIKKVTTKGEIKGEQSGEFVPILALDCRGLEPVEWHPSTDFAATSGGGTVFECDAVDLSEGDWSEYCEKSSMPLSIMEIEHRFETA 486
+ VL++K ELENVES++ ++ W++ V+ D RE V ++ A E+ +RGTANF+V+W GSK +T NI D+K VT + E SG+FVP++A +CRG EP++WHP+ + S T + VDLSE DW +Y + +++ + I +E+ F+ +
Sbjct: 3 IIVLRMKAELENVESIEIPADHTWVLDVKQATGEDVRERVTLSAAETLEIPNSRGTANFLVRWNGSKSVSTINIQDVKNVTRR-TYTAEDSGKFVPVVAFECRGAEPIKWHPADGYTVRSKKATFKD---VDLSE-DWVDYDQDANLSVGIYNVEYEFQVS 158 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig619.16991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig619.16991.1 >prot_F-serratus_M_contig619.16991.1 ID=prot_F-serratus_M_contig619.16991.1|Name=mRNA_F-serratus_M_contig619.16991.1|organism=Fucus serratus male|type=polypeptide|length=163bp KVFVLKVKCELENVESMKANDNNKWIMTVQSPDESDRREHVEVTRARIEEback to top mRNA from alignment at F-serratus_M_contig619:208424..211779+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig619.16991.1 ID=mRNA_F-serratus_M_contig619.16991.1|Name=mRNA_F-serratus_M_contig619.16991.1|organism=Fucus serratus male|type=mRNA|length=3356bp|location=Sequence derived from alignment at F-serratus_M_contig619:208424..211779+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig619:208424..211779+ >mRNA_F-serratus_M_contig619.16991.1 ID=mRNA_F-serratus_M_contig619.16991.1|Name=mRNA_F-serratus_M_contig619.16991.1|organism=Fucus serratus male|type=CDS|length=978bp|location=Sequence derived from alignment at F-serratus_M_contig619:208424..211779+ (Fucus serratus male)back to top |