|
|
Homology
BLAST of mRNA_F-serratus_M_contig619.16989.1 vs. uniprot
Match: A0A6H5KD26_9PHAE (Nuclear transcription factor Y subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD26_9PHAE) HSP 1 Score: 174 bits (440), Expect = 6.350e-45 Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 2
Query: 767 YPMYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELLAYRKQLEALDPEGATAP 1057
YP++SR+ALPTDQVTEDPPTYVNAKQYRRI+KRREARAKLEARRKVAPQRK+FLHKSRHDHA RRVRGPGGRFLTKAEL YRKQLEA DPEGATAP
Sbjct: 70 YPLFSRVALPTDQVTEDPPTYVNAKQYRRIMKRREARAKLEARRKVAPQRKTFLHKSRHDHAMRRVRGPGGRFLTKAELEQYRKQLEAQDPEGATAP 166
BLAST of mRNA_F-serratus_M_contig619.16989.1 vs. uniprot
Match: D7FQ09_ECTSI (Nuclear transcription factor Y subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ09_ECTSI) HSP 1 Score: 158 bits (400), Expect = 4.580e-40 Identity = 83/93 (89.25%), Postives = 85/93 (91.40%), Query Frame = 2
Query: 803 QVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELLAYRKQLEALDPEGATAPAEVAGPGK 1081
QVTEDPPTYVNAKQYRRI+KRREARAKLEARRKVAPQRK+FLHKSRHDHA RRVRGPGGRFLTKAEL YRKQLEA DPEGATAPA G GK
Sbjct: 34 QVTEDPPTYVNAKQYRRIMKRREARAKLEARRKVAPQRKTFLHKSRHDHAMRRVRGPGGRFLTKAELDQYRKQLEAQDPEGATAPAPQPGSGK 126
BLAST of mRNA_F-serratus_M_contig619.16989.1 vs. uniprot
Match: A0A7R9U4I3_9STRA (Nuclear transcription factor Y subunit n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4I3_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.730e-21 Identity = 55/84 (65.48%), Postives = 70/84 (83.33%), Query Frame = 2
Query: 767 YPMYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELLAYRK 1018
YP+ S++ L +++++ PTYVNAKQYRRI+KRR+ARAKLE++ K AP RK++LHKSRH+HACRR RGP GRFLTKAEL RK
Sbjct: 140 YPVASKVPL-NQEMSDEQPTYVNAKQYRRILKRRQARAKLESKWK-APSRKTYLHKSRHEHACRRPRGPSGRFLTKAELEELRK 221
BLAST of mRNA_F-serratus_M_contig619.16989.1 vs. uniprot
Match: A0A835ZFN6_9STRA (Nuclear transcription factor Y subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFN6_9STRA) HSP 1 Score: 107 bits (266), Expect = 6.520e-21 Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 2
Query: 812 EDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELLA 1009
E+ PTYVNAKQY+RI+KRREARAKLE RR++ RKSFLHKSRHDHACRR RGPGGRFLTKAEL A
Sbjct: 89 EENPTYVNAKQYKRILKRREARAKLEERRRIPAARKSFLHKSRHDHACRRKRGPGGRFLTKAELAA 154
BLAST of mRNA_F-serratus_M_contig619.16989.1 vs. uniprot
Match: A0A075AQC5_ROZAC (Transcriptional activator HAP2 n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AQC5_ROZAC) HSP 1 Score: 94.7 bits (234), Expect = 2.740e-19 Identity = 53/100 (53.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query: 773 MYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELLAYRKQLEALDPEGATAPAEVAG 1072
M R+ALP V E+ P YVNAKQY+RI+KRR ARAK EA RK + ++K +LH+SRH HA RR+RGPGGRFLT AE+ +K+ + G E G
Sbjct: 12 MMQRVALPAT-VVEEEPMYVNAKQYQRILKRRIARAKYEAARKKSMEKKPYLHESRHKHAMRRLRGPGGRFLTAAEIAEMKKKEKEQSEAGGNQNREAQG 110
BLAST of mRNA_F-serratus_M_contig619.16989.1 vs. uniprot
Match: A0A433P8N8_9FUNG (Transcriptional activator HAP2 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433P8N8_9FUNG) HSP 1 Score: 95.9 bits (237), Expect = 6.950e-19 Identity = 56/101 (55.45%), Postives = 70/101 (69.31%), Query Frame = 2
Query: 770 PMYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTK-----AELLAYRKQLEALDPEGATAP 1057
PMY R+ +P++ VTED P YVNAKQY RI+KRR ARA+LE KVA RK +LH+SRH HA RR RGPGGRFL++ AEL + + E D G+ +P
Sbjct: 60 PMY-RVPIPSEVVTEDEPLYVNAKQYHRILKRRAARARLEELNKVAKTRKPYLHESRHKHAMRRPRGPGGRFLSESATEIAELDKHVGKQEGGDENGSVSP 159
BLAST of mRNA_F-serratus_M_contig619.16989.1 vs. uniprot
Match: A0A433Q1P5_9FUNG (Transcriptional activator HAP2 n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q1P5_9FUNG) HSP 1 Score: 99.0 bits (245), Expect = 7.390e-19 Identity = 58/100 (58.00%), Postives = 69/100 (69.00%), Query Frame = 2
Query: 770 PMYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELLAYRKQ--LEALDPE--GATAP 1057
P R+ L + VTED P YVNAKQY RI+KRR ARA+LE + KVA RK +LH+SRH HA RR RGPGGRFLT AE+ KQ LE D + G+T+P
Sbjct: 169 PALYRVPLSNEVVTEDEPLYVNAKQYHRILKRRAARARLEEQNKVAKTRKPYLHESRHKHAMRRPRGPGGRFLTAAEIAELDKQAKLEGKDGDENGSTSP 268
BLAST of mRNA_F-serratus_M_contig619.16989.1 vs. uniprot
Match: A0A1Y1YW95_9FUNG (Transcriptional activator HAP2 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YW95_9FUNG) HSP 1 Score: 91.7 bits (226), Expect = 1.420e-18 Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 2
Query: 782 RMALPTDQVT--EDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELLAYRKQLE 1027
R+ LP + VT ED P YVNAKQY RI+KRR ARAKLE + ++ RK +LH+SRH HA RR RGPGGRFLT AE+ K+ E
Sbjct: 3 RVPLPNEVVTAGEDDPLYVNAKQYHRILKRRAARAKLEEKHRIQKSRKPYLHESRHRHAMRRPRGPGGRFLTAAEIAELDKKKE 86
BLAST of mRNA_F-serratus_M_contig619.16989.1 vs. uniprot
Match: A0A485KL93_9STRA (Nuclear transcription factor Y subunit n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KL93_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.420e-18 Identity = 58/101 (57.43%), Postives = 67/101 (66.34%), Query Frame = 2
Query: 773 MYSRMALPTD-QVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELLAYRKQLEALDPEGATAPAEVAG 1072
M+SRM LP ++ E+ P YVNAKQY RI+ RR+ RAKLEA+ A QRK+FLH SRH HA RR RGPGGRFLTK E+ ALD E A A A G
Sbjct: 69 MFSRMPLPGGGEMVEEEPVYVNAKQYHRIMVRRQQRAKLEAKLGNARQRKAFLHASRHKHAMRRPRGPGGRFLTKEEIA-------ALDREEAAAAAAAQG 162
BLAST of mRNA_F-serratus_M_contig619.16989.1 vs. uniprot
Match: A0A6G0WAQ9_9STRA (Nuclear transcription factor Y subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAQ9_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.220e-18 Identity = 57/101 (56.44%), Postives = 66/101 (65.35%), Query Frame = 2
Query: 773 MYSRMALPTD-QVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELLAYRKQLEALDPEGATAPAEVAG 1072
M+SRM LP ++ E+ P YVNAKQY RI+ RR+ RAKLEA+ QRK+FLH SRH HA RR RGPGGRFLTK E+ ALD E A A A G
Sbjct: 31 MFSRMPLPGGGEMVEEEPVYVNAKQYHRIMVRRQQRAKLEAKLGNTRQRKAFLHASRHKHAMRRPRGPGGRFLTKEEIA-------ALDREEAEASAAAQG 124
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 161.4 |
| Seed ortholog evalue | 8.8e-37 |
| Seed eggNOG ortholog | 2880.D7FQ09 |
| Preferred name | HAP2 |
| KEGG ko | ko:K08064 |
| KEGG Pathway | ko04612,ko05152,map04612,map05152 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000429,GO:0000436,GO:0000976,GO:0000977,GO:0000978,GO:0000979,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001077,GO:0001228,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0006109,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007154,GO:0007584,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009991,GO:0010106,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0016602,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019725,GO:0030003,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0032774,GO:0032991,GO:0033217,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042592,GO:0042594,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043457,GO:0043467,GO:0043565,GO:0043618,GO:0043620,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044798,GO:0045893,GO:0045935,GO:0045944,GO:0045990,GO:0045991,GO:0046483,GO:0046916,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0060255,GO:0065007,GO:0065008,GO:0070887,GO:0071496,GO:0071704,GO:0080090,GO:0090304,GO:0090575,GO:0097159,GO:0097659,GO:0098771,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 |
| EggNOG free text desc. | DNA-binding transcription factor activity |
| EggNOG OGs | COG5224@1,KOG1561@2759 |
| Ec32 ortholog description | Histone-like transcription factor, NF-YA subunit |
| Ec32 ortholog | Ec-01_007920.1 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03000 |
| Exons | 6 |
| Model size | 2828 |
| Cds size | 1191 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622931915.377782-UTR-F-serratus_M_contig619:166321..167756 | 1622931915.377782-UTR-F-serratus_M_contig619:166321..167756 | Fucus serratus male | UTR | F-serratus_M_contig619 166322..167756 - |
| 1690964055.9089823-UTR-F-serratus_M_contig619:166321..167756 | 1690964055.9089823-UTR-F-serratus_M_contig619:166321..167756 | Fucus serratus male | UTR | F-serratus_M_contig619 166322..167756 - |
| 1622931915.6111715-UTR-F-serratus_M_contig619:171007..171040 | 1622931915.6111715-UTR-F-serratus_M_contig619:171007..171040 | Fucus serratus male | UTR | F-serratus_M_contig619 171008..171040 - |
| 1690964055.9777536-UTR-F-serratus_M_contig619:171007..171040 | 1690964055.9777536-UTR-F-serratus_M_contig619:171007..171040 | Fucus serratus male | UTR | F-serratus_M_contig619 171008..171040 - |
| 1622931915.6664124-UTR-F-serratus_M_contig619:171528..171697 | 1622931915.6664124-UTR-F-serratus_M_contig619:171528..171697 | Fucus serratus male | UTR | F-serratus_M_contig619 171529..171697 - |
| 1690964055.9887311-UTR-F-serratus_M_contig619:171528..171697 | 1690964055.9887311-UTR-F-serratus_M_contig619:171528..171697 | Fucus serratus male | UTR | F-serratus_M_contig619 171529..171697 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622931915.3921695-CDS-F-serratus_M_contig619:167756..168056 | 1622931915.3921695-CDS-F-serratus_M_contig619:167756..168056 | Fucus serratus male | CDS | F-serratus_M_contig619 167757..168056 - |
| 1690964055.9245-CDS-F-serratus_M_contig619:167756..168056 | 1690964055.9245-CDS-F-serratus_M_contig619:167756..168056 | Fucus serratus male | CDS | F-serratus_M_contig619 167757..168056 - |
| 1622931915.4116938-CDS-F-serratus_M_contig619:168480..168654 | 1622931915.4116938-CDS-F-serratus_M_contig619:168480..168654 | Fucus serratus male | CDS | F-serratus_M_contig619 168481..168654 - |
| 1690964055.934362-CDS-F-serratus_M_contig619:168480..168654 | 1690964055.934362-CDS-F-serratus_M_contig619:168480..168654 | Fucus serratus male | CDS | F-serratus_M_contig619 168481..168654 - |
| 1622931915.4294255-CDS-F-serratus_M_contig619:168855..168972 | 1622931915.4294255-CDS-F-serratus_M_contig619:168855..168972 | Fucus serratus male | CDS | F-serratus_M_contig619 168856..168972 - |
| 1690964055.9432876-CDS-F-serratus_M_contig619:168855..168972 | 1690964055.9432876-CDS-F-serratus_M_contig619:168855..168972 | Fucus serratus male | CDS | F-serratus_M_contig619 168856..168972 - |
| 1622931915.4503665-CDS-F-serratus_M_contig619:169518..169620 | 1622931915.4503665-CDS-F-serratus_M_contig619:169518..169620 | Fucus serratus male | CDS | F-serratus_M_contig619 169519..169620 - |
| 1690964055.9522817-CDS-F-serratus_M_contig619:169518..169620 | 1690964055.9522817-CDS-F-serratus_M_contig619:169518..169620 | Fucus serratus male | CDS | F-serratus_M_contig619 169519..169620 - |
| 1622931915.536456-CDS-F-serratus_M_contig619:170509..171007 | 1622931915.536456-CDS-F-serratus_M_contig619:170509..171007 | Fucus serratus male | CDS | F-serratus_M_contig619 170510..171007 - |
| 1690964055.961494-CDS-F-serratus_M_contig619:170509..171007 | 1690964055.961494-CDS-F-serratus_M_contig619:170509..171007 | Fucus serratus male | CDS | F-serratus_M_contig619 170510..171007 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig619.16989.1 >prot_F-serratus_M_contig619.16989.1 ID=prot_F-serratus_M_contig619.16989.1|Name=mRNA_F-serratus_M_contig619.16989.1|organism=Fucus serratus male|type=polypeptide|length=397bp
MDVTTTQQDQRPPQPQPQLALQLPTPPPPAHEHNSRAMTSSLTPLGDQQS SLAALPNPPPHVEVGLTDTNQQKQQQQQQQQQQPGLQIEVSQHGVPPGQT LFHQHQQQQGAAALRHLGQQAGGVGAIGDGGAGGATAGGVGAVVDGQQQQ NLLAQAMSPQHQQQLMNMYMAAMAQSPAAMMLMPYMAQYPMYSRMALPTD QVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHA CRRVRGPGGRFLTKAELLAYRKQLEALDPEGATAPAEVAGPGKSKTQPPP PAPRILGGGSTVAAPVASKTASNSSAAAAPLNLGKEPAVAGAVTTAATTG ASFGSFPIVIPSPVDGESSAGDAAVGHIVSAQHQQSSLPKRAATSE* back to topmRNA from alignment at F-serratus_M_contig619:166322..171697- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig619.16989.1 ID=mRNA_F-serratus_M_contig619.16989.1|Name=mRNA_F-serratus_M_contig619.16989.1|organism=Fucus serratus male|type=mRNA|length=5376bp|location=Sequence derived from alignment at F-serratus_M_contig619:166322..171697- (Fucus serratus male) GTCGTCGCCGCGTTACCCACCCAATCCGAGCGCCTCGGAAATAACAATCA
TCGCACGAAGGACGTTGGCAGATATTTCCGCCGCCGCTGAATATACTCAT
CACACGACAGGCAGGCTGCTGATTGATTCTCAGAGGGCGTTTTCCGCCCG
AGCGTCTTGAACCGGAAGGGTGAGAATTTGCTCGGAGAACTGAACTGATC
CTCCCCTGATCTCTTGGTTCTTAATCTTGTCGACATGAGAAGCGAGCCTG
TCCGAGTCGGGGCAGCAGCTGGCAGGGAGGACTGGGTGTGCCGCAGCTTC
TGGACGAAATATCTTAATGAAGTTTCTCCGCGATTGAGCTTTGAGCCACT
TAGGAGCGCAAGAAAGCACGCAGTTCGTATTTGGTGTGGGGAGTGAGTGA
CCTATCGAGCTCGCTAGTGCTGGTTTTTCGGGGTAACGACGAAATTTCCG
ACCTTGAAACAAGACTTGGGTGGGATGCGCCCTACGTTCTGCGCCTCAAT
GACCACATCGGACCACATCACCCGATCGGAGTAGGTTTCTCGCACTCGTA
CATGACAAATATTGTGGCACCAGCTGACTGGACTGTACCTCTCCCGACTG
CACTCTCTTTGCACGCTGCTTGTCCTTTCGCCCCCCTCATCTACGCCTTT
TCCTTAGTGGGCGGGACGAAAAACTGCCTAGGCATCGGCCATGGACGTCA
CCACCACTCAGCAGGATCAGAGGCCCCCTCAGCCTCAGCCTCAGCTGGCG
CTGCAGCTTCCAACCCCTCCTCCACCCGCCCACGAGCACAACTCGAGGGC
AATGACGTCCTCTCTGACCCCCCTCGGTGATCAGCAGTCATCATTAGCTG
CGCTTCCCAATCCTCCGCCCCACGTAGAGGTCGGCCTCACCGACACTAAC
CAGCAGAAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCCAGGTTTGCA
AATTGAAGTCTCGCAGCATGGAGTCCCTCCGGGCCAGACGCTTTTTCACC
AACACCAACAGCAGCAGGGGGCTGCGGCGCTGCGCCACCTAGGGCAGCAA
GCCGGAGGAGTAGGAGCGATAGGAGATGGAGGGGCCGGAGGTGCCACGGC
CGGGGGAGTTGGCGCTGTGGTCGATGGGCAGCAGCAGCAGAACCTGTTAG
CACAGGCTATGTCCCCACAGCACCAGCAGCAGCTTATGGTGAGATCTCTC
TTCCGAATAAAATAGTTTAGGTATTAGAGCTACGGTAGTAGCAGCACGTC
TACGAACTACTGTACTACGGTATTAATACTACCATTGCTTTCCAACCGGT
AAGACATGGTCGTGGTACCGTACACCAGGAAGACCGACCCCTTCAACGTA
CTACCTGGTATTATATTACTAATATTTATAGCATACTGTACTAACGAAAC
CGCAGCATCGCCCGTATGAGGTAGCACGTAGATGGAATATTTCAAATTAT
CCCAGTAGTGTAGGTGGGCATTGCCCGCTCTGTAAAAGGGAGATTTGAGA
TTTGTGGTCAAAGGTATGTGTACCACTCGAGCTGTTTATAGAGGGTGTTG
CAGGATAACGCGTGGATTGCTGTCGCCCATCTGGCCACAGCATCGCACCC
CTTCCTATTACCCTGTACATTCAATTCAAGACATTAGTAGTAAGACAGTA
GTGCTCGTACTTGCGGTACGTACCTGGTACTATTTGCAGTGTAATAGTTT
GAACTGTTTCTGCCCTCTCATCGAGTACTACTCGCTGTGCTGTAATTATG
GAAGGGTGCTCACGATCTATTCGTTAAGAATTACACACAAACCTCCGGAC
GCAGCAGGTGTCGAGCCTACAGCAGCATAGGCAGCGATCAGCAAAAGTGA
CCCCTTTGCGAACAAACGTCGCCAGAATCTAGATGCATACATGTAGAAGC
CTTTTAATTTGCATGGCGAACACGCGTAGGCTCTTCAAGCGCTATCAGCA
TTTTTTAACCCCCGAATAACCACTTGAGCTATCCCTTTAAAGTACCATAT
ATTATAATGTTCCCCCTCGTGACCCATAACCGTTATCTACCCCTCCCCCC
CACACTACCCCACGACTTCCCCAGCAGAACATGTACATGGCGGCCATGGC
GCAAAGCCCTGCGGCGATGATGTTAATGCCCTACATGGCACAGTATCCCA
TGTACAGCCGCATGGCCCTGCCAACGGACGTGAGTGGTATATACTAAAAT
AGCTCCTACACTTGTAAGCTGCATGCATTGTGATGGATTTTAAGAATAAC
GCTCGATGAAGGACTCACAAGTTTCGCTGTCACTTTTGGAGGAAGCGCGG
GCGGGGTGTTGACAAGACTAAGACCCTCCTCACCGCACACGCGTGGCGAC
GATCATCTTGATTAACCCAAGCCCTCATTTTACTTCGCTCACGCGGATAG
GGAGAGCTTTTTTAAGAAGTCATGGTACCTGATTTGCCTCTCTGAACATC
ATGGACGATCTCTAAGGGCTTCAGTGAGGACGCGCGCCACGCCTCGTGCC
GTCAGCCGTGCGAATCAGCTATGCCCTTTCTTACCAAGGGTACGGTTTTG
GCCACTAAGCCCATCTCTAGAATTGCGTGGGTTTAGAAACCTTTCCATGG
CCGCCAGGGTATTGCCGCGTGTCACCAGCGACCTACCAATACTCTCAGTT
GTAGCCAGGCTCCACCGCTTGGCGCGTAGAACGTAAACGGTTTCCCATTT
CTGTTTGATTTCTCTCGTCAAGCAGCAGGTCACTGAGGACCCACCGACGT
ATGTTAACGCGAAGCAGTACCGGCGTATCATCAAGCGGCGAGAGGCGAGG
GCGAAGCTCGAGGCACGGCGCAAGGTTGCTCCGCAGCGAAAGGTTTGGAG
CAATTATCTTCTGTCGAACTCACGGCGACGAGAATGCAGGCAGCGTTCTA
CGCGTTGCCGTAATACGAGCCGAAGTATGCCTCTGGTACATATCGAGGGG
TGACTCGGTAACCCCCCTCCCCTCCGCTCCAACCCCATGATGTTACCCCA
TTTTTTCCGTTGACGTCTGCTTACTCGCTCCTGTTTATTACAGTCTTTCC
TTCACAAGTCTCGACACGACCACGCTTGCCGCCGAGTGCGCGGGCCGGGG
GGGCGCTTCCTCACGAAGGCTGAGCTCCTCGCGTATCGCAAACAGCTCGA
GGCTCTAGACCCGGAAGGTGCTACCGCGCCGGCGGAGGTTGCGGGCCCCG
GGAAATCAAAAACCCAGGTGGGATGAGACTTTGTCCAGCACCACCTTATG
TCGTCTTTTGAGAGACGGACTTGTGTCGGTCTCCGCCTTTCCGCCTCCAT
GCGACAGGCTGTGTTTGGTACCTAAAGGTCGACAGAGGACCCAAACGATC
GCTTTGGGTCCTGCTTGTGAGAGTGTCTCGTCGTGCACAACACACGAGAA
GCGTCAACAAGAACTTGTGGTGGTTTCTCTCTTCGTCGACGGTCGTTTTC
TTGGATTAAGATTGTGCTAAGTCTTTCCCAGCTTGTCCCTGCTAGATCTC
CGTGACACATCCTAAACCTGCTTGCCGTCGAGAAAAGCGGGTACGTTAGC
GCGGGGTTTCTCTTTTCCCGATGCCCCGATCATATACTTATCTTACACCA
CCTGCCTAATACTGCTGCTACTCTTACGAACCGAAACCCAGCCCCCGCCT
CCGGCACCGCGAATCCTGGGAGGAGGTTCAACCGTCGCCGCTCCGGTCGC
ATCGAAGACCGCATCAAATTCGTCGGCCGCGGCGGCCCCGTTGAATTTGG
GGAAAGAACCGGCCGTGGCGGGGGCGGTGACCACAGCGGCTACGACCGGG
GCGAGCTTCGGTAGTTTTCCCATCGTGATACCATCGCCGGTGGACGGCGA
GAGTTCTGCGGGCGATGCCGCCGTCGGTCACATTGTCTCTGCGCAACACC
AGCAATCCTCTCTGCCAAAACGAGCGGCAACTAGCGAGTGAAGTAAATAA
TCTCAAAACCTTCCCTTTTTTTTTCGGATGTGTTCCTAGAAGGGTTGGTG
TCTAGTTTTAGCGTACCTTCAGTTTTGTCGTTGTATGCCAACCCCGCCTC
TTCGGGGATTCGTGAAGGAGGAAATACTTGAAGCGCTTGATGGTAGGGAC
CCCCCCCTCCCCAAACACGATTGCGATCGATATGGAGCAATGCCACGATT
TGAATCTTCGGAAGGACGCTGGGATTGATCCTCAAAACATTTTACGGCAG
ATGCTGGACAACCGTCACTTGCAGGGAATCAATTTTTTATTGCCGCGCGT
GCATCGTGACTGCGCATAAAGCTGTTGCGGCTCGCGAGGCGCTCCAGGAC
TGGTCACGCTTAGGCTTGATGTAGATAGTCGTGGGGGGTGGAAAATTCCA
ACGGTTCACGCCTGTGCCGAGAGTTTCGCTGGCCCCTCTGTGCGTCGTGT
GCTCAACGTAGAATAGTAGCGGCTGGACACTGAGTGCAAATGTCTTCGTC
GAGCGCAGTAGCATGCTTTTCTCCCCCCTCGGCGGAGCGGATCTTTCCTG
ATTGAAGTAGGGCATAGGACAGGCTGGCGGGTTGGGGGCGAGAATTTAGC
GTCGCGGCGCACATGCTGCCGCCCGACCCGATCCGACCCTGGTTTTCGCC
ATGAAAACGTGGCGCTTGCTTGCCTGCAGAGCAGGCTGTTTGATGGATAC
ACCAAGCCACCTCGGTGCAGTGTAGGTGTTGTTGTCTCTCTGCATAGCTT
GGATGCATGGAAGTTTCTCTTGGGCAAAGCAAGGAAAAGGGAGTTCGTCA
CAGGGGAGGCGTAGGGCGGAAGGCGGGCGGGAGAAGCGTAGGGGCAAAGG
GCAATCGAGACGTGCTGTACACGTGGCGTGTTTTCCTCGACGGATTCTCG
GTTTCACGTAAGATTCGATGTTTTGTTTTTATTTTTAGAAAATGTTTTCC
TGTAGTGTACAGTACTGGATTGTTTCGTCGTTCGATGATTAAGGCATTGC
GAACGATCGGTAAGGAAAAATGCGAGCTGGCGGGCATGAAGGGTCAAGCT
CACGTATATGCATACACCATTCGTGTTTACTGTAGCTAAGAGTATGTTTC
CGCGCTTTTCCGCGGCCTTCTTCCACAGTGGCTACAGCGCTTCCTTAGAG
CTCAGGGCAGTGTTTGTGTATGGTCATCACCTTGAGCAGATTGGAGCATG
AACCGTGTGCCAATCCTTTTTGCAGCCCGCTGAAAGGAGAAGTCGACACC
TGTACCAGGTGTATGTATTTTCACGTGTCTCCGTTCGCGCCTGAGAAATT
GGTCTCCCGAGGCAACCGAGTACGTACTATAGGGCCAATAACATAATTGG
CATATGATGGGGCACTTTCTGCTAAGTTCACGTGGGTGAGGTGATTGATT
TTATGTGCCGTGGCCGACGTATTCGA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig619:166322..171697- >mRNA_F-serratus_M_contig619.16989.1 ID=mRNA_F-serratus_M_contig619.16989.1|Name=mRNA_F-serratus_M_contig619.16989.1|organism=Fucus serratus male|type=CDS|length=2382bp|location=Sequence derived from alignment at F-serratus_M_contig619:166322..171697- (Fucus serratus male) ATGGACGTCACCACCACTCAGCAGGATCAGAGGCCCCCTCAGCCTCAGCC TCAGCTGGCGCTGCAGCTTCCAACCCCTCCTCCACCCGCCCACGAGCACA ACTCGAGGGCAATGACGTCCTCTCTGACCCCCCTCGGTGATCAGCAGTCA TCATTAGCTGCGCTTCCCAATCCTCCGCCCCACGTAGAGGTCGGCCTCAC CGACACTAACCAGCAGAAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGC CAGGTTTGCAAATTGAAGTCTCGCAGCATGGAGTCCCTCCGGGCCAGACG CTTTTTCACCAACACCAACAGCAGCAGGGGGCTGCGGCGCTGCGCCACCT AGGGCAGCAAGCCGGAGGAGTAGGAGCGATAGGAGATGGAGGGGCCGGAG GTGCCACGGCCGGGGGAGTTGGCGCTGTGGTCGATGGGCAGCAGCAGCAG AACCTGTTAGCACAGGCTATGTCCCCACAGCACCAGCAGCAGCTTATGAT GGACGTCACCACCACTCAGCAGGATCAGAGGCCCCCTCAGCCTCAGCCTC AGCTGGCGCTGCAGCTTCCAACCCCTCCTCCACCCGCCCACGAGCACAAC TCGAGGGCAATGACGTCCTCTCTGACCCCCCTCGGTGATCAGCAGTCATC ATTAGCTGCGCTTCCCAATCCTCCGCCCCACGTAGAGGTCGGCCTCACCG ACACTAACCAGCAGAAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCCA GGTTTGCAAATTGAAGTCTCGCAGCATGGAGTCCCTCCGGGCCAGACGCT TTTTCACCAACACCAACAGCAGCAGGGGGCTGCGGCGCTGCGCCACCTAG GGCAGCAAGCCGGAGGAGTAGGAGCGATAGGAGATGGAGGGGCCGGAGGT GCCACGGCCGGGGGAGTTGGCGCTGTGGTCGATGGGCAGCAGCAGCAGAA CCTGTTAGCACAGGCTATGTCCCCACAGCACCAGCAGCAGCTTATGAACA TGTACATGGCGGCCATGGCGCAAAGCCCTGCGGCGATGATGTTAATGCCC TACATGGCACAGTATCCCATGTACAGCCGCATGGCCCTGCCAACGGACAA CATGTACATGGCGGCCATGGCGCAAAGCCCTGCGGCGATGATGTTAATGC CCTACATGGCACAGTATCCCATGTACAGCCGCATGGCCCTGCCAACGGAC CAGGTCACTGAGGACCCACCGACGTATGTTAACGCGAAGCAGTACCGGCG TATCATCAAGCGGCGAGAGGCGAGGGCGAAGCTCGAGGCACGGCGCAAGG TTGCTCCGCAGCGAAAGCAGGTCACTGAGGACCCACCGACGTATGTTAAC GCGAAGCAGTACCGGCGTATCATCAAGCGGCGAGAGGCGAGGGCGAAGCT CGAGGCACGGCGCAAGGTTGCTCCGCAGCGAAAGTCTTTCCTTCACAAGT CTCGACACGACCACGCTTGCCGCCGAGTGCGCGGGCCGGGGGGGCGCTTC CTCACGAAGGCTGAGCTCCTCGCGTATCGCAAACAGCTCGAGGCTCTAGA CCCGGAAGGTGCTACCGCGCCGGCGGAGGTTGCGGGCCCCGGGAAATCAA AAACCCAGTCTTTCCTTCACAAGTCTCGACACGACCACGCTTGCCGCCGA GTGCGCGGGCCGGGGGGGCGCTTCCTCACGAAGGCTGAGCTCCTCGCGTA TCGCAAACAGCTCGAGGCTCTAGACCCGGAAGGTGCTACCGCGCCGGCGG AGGTTGCGGGCCCCGGGAAATCAAAAACCCAGCCCCCGCCTCCGGCACCG CGAATCCTGGGAGGAGGTTCAACCGTCGCCGCTCCGGTCGCATCGAAGAC CGCATCAAATTCGTCGGCCGCGGCGGCCCCGTTGAATTTGGGGAAAGAAC CGGCCGTGGCGGGGGCGGTGACCACAGCGGCTACGACCGGGGCGAGCTTC GGTAGTTTTCCCATCGTGATACCATCGCCGGTGGACGGCGAGAGTTCTGC GGGCGATGCCGCCGTCGGTCACATTGTCTCTGCGCAACACCAGCAATCCT CTCTGCCAAAACGAGCGGCAACTAGCGAGTGACCCCCGCCTCCGGCACCG CGAATCCTGGGAGGAGGTTCAACCGTCGCCGCTCCGGTCGCATCGAAGAC CGCATCAAATTCGTCGGCCGCGGCGGCCCCGTTGAATTTGGGGAAAGAAC CGGCCGTGGCGGGGGCGGTGACCACAGCGGCTACGACCGGGGCGAGCTTC GGTAGTTTTCCCATCGTGATACCATCGCCGGTGGACGGCGAGAGTTCTGC GGGCGATGCCGCCGTCGGTCACATTGTCTCTGCGCAACACCAGCAATCCT CTCTGCCAAAACGAGCGGCAACTAGCGAGTGA back to top
|