mRNA_F-serratus_M_contig6186.16982.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6186.16982.1 vs. uniprot
Match: D7FUS9_ECTSI (DNA repair protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS9_ECTSI) HSP 1 Score: 234 bits (598), Expect = 1.530e-71 Identity = 110/135 (81.48%), Postives = 120/135 (88.89%), Query Frame = 1
Query: 4 MTYVWEIAKTSRAMCRRCDDKISKGALKIGVVTEGSWGPSTQWHHLQCTIFRVKKVEEIEGFNDLDDALLPILEEQVKKSQGEVDDMYEPITPDDLVRKEWSEKAQCPRDVMATLLPYQQEGLAWMLNQEKLDYK 408
M YV EIAKTSRAMCRRCD+KI KGALKIGVVTEGSWGPSTQWHHL CT+F+V EE+EG+ DLDDA +LE++V KSQGEVDDMYEPITPDDLVRKEW+EKA CP D+MATLLPYQ EGLAWMLNQEKLDYK
Sbjct: 1 MRYVCEIAKTSRAMCRRCDEKIMKGALKIGVVTEGSWGPSTQWHHLMCTVFKVTTPEEVEGYGDLDDAAQTLLEQKVVKSQGEVDDMYEPITPDDLVRKEWTEKANCPDDIMATLLPYQAEGLAWMLNQEKLDYK 135
BLAST of mRNA_F-serratus_M_contig6186.16982.1 vs. uniprot
Match: A0A6H5JN56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN56_9PHAE) HSP 1 Score: 237 bits (605), Expect = 6.490e-70 Identity = 110/136 (80.88%), Postives = 123/136 (90.44%), Query Frame = 1
Query: 1 PMTYVWEIAKTSRAMCRRCDDKISKGALKIGVVTEGSWGPSTQWHHLQCTIFRVKKVEEIEGFNDLDDALLPILEEQVKKSQGEVDDMYEPITPDDLVRKEWSEKAQCPRDVMATLLPYQQEGLAWMLNQEKLDYK 408
PM YV EIAKTSRAMCRRCD+KI+KGALKIGVVTEGSWGPSTQWHHL CT+F+V EE+EG+ DLDDA +LE++V KSQGEVDDMYEPITPDDLVRKEW++KA+CP D+MATLLPYQ EGLAWMLNQEKLDYK
Sbjct: 214 PMRYVCEIAKTSRAMCRRCDEKITKGALKIGVVTEGSWGPSTQWHHLMCTVFKVTTPEEVEGYGDLDDAAQTLLEQKVVKSQGEVDDMYEPITPDDLVRKEWTDKAKCPDDIMATLLPYQAEGLAWMLNQEKLDYK 349
BLAST of mRNA_F-serratus_M_contig6186.16982.1 vs. uniprot
Match: A0A7S3MHT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHT9_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.110e-33 Identity = 60/134 (44.78%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 7 TYVWEIAKTSRAMCRRCDDKISKGALKIGVVTEGSWGPSTQWHHLQCTIFR--VKKVEEIEGFNDLDDALLPILEEQVKKSQGEVDDMYEPITPDDLVRKEWSEKAQCPRDVMATLLPYQQEGLAWMLNQEKLD 402
TY+ E+AK+ RA C++CD KI ++IGV+ +G WG T+W HL CT+F + VEE++GF+DL+ +++E+ S E+D+ EPI PD+LVRK W + + +++ LLPYQ+EGL WM+NQE+ D
Sbjct: 34 TYIVEVAKSGRAECKKCDCKIENKCIRIGVIVDGEWGLFTRWQHLDCTVFHKGINSVEELDGFSDLNTQQKDLVKERFALSANEIDEDMEPIDPDELVRKAWEKPVEPSPNLLMPLLPYQKEGLGWMVNQEQND 167
BLAST of mRNA_F-serratus_M_contig6186.16982.1 vs. uniprot
Match: A0A7R9U350_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U350_9STRA) HSP 1 Score: 120 bits (300), Expect = 4.470e-29 Identity = 57/134 (42.54%), Postives = 87/134 (64.93%), Query Frame = 1
Query: 10 YVWEIAKTSRAMCRRCDDKISKGALKIGVVTEGSWGPSTQWHHLQCTIFR-VKKVEEIEGFNDLDDALLPILEEQVKKSQGEVDDMYEPITPDDLVRKEWSEKAQCPRDVMATLLPYQQEGLAWMLNQEKLDYK 408
+ EI+K+ RA CRRC+ I KG L++G + EG +G T+W HL C F ++K E+++GF LD+ L +++++Q +V + PD VRK W+EK P+D+ LLPYQQEGLAWM++QE+ D++
Sbjct: 197 FCTEISKSGRAECRRCNQMIPKGVLRVGEILEGDFGLYTRWLHLSCAYFTGIRKPEDVKGFTALDEEQRAQLTARLEETQDKVPADMRAVEPDACVRKAWTEKRATPKDIKLPLLPYQQEGLAWMIHQEESDHR 330
BLAST of mRNA_F-serratus_M_contig6186.16982.1 vs. uniprot
Match: A0A7S1XLE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLE0_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.190e-27 Identity = 57/135 (42.22%), Postives = 87/135 (64.44%), Query Frame = 1
Query: 7 TYVWEIAKTSRAMCRRCDDKISKGALKIGVVTEGSWGPSTQWHHLQCTIFR-VKKVEEIEGFNDLDDALLPILEEQVKKSQGEVDDMYEPITPDDLVRKEWSEKAQCPRDVMATLLPYQQEGLAWMLNQEKLDYK 408
T+ E+AK+ R+ CRRC+ I+K L++G EG +G T+W HL+C F ++ E++ G+ LD+ + +++ K+Q EV P+ P++ VR W+EKA P D+ LLPYQQEGLAWML+QEK D++
Sbjct: 170 TFCVEMAKSGRSECRRCNTLIAKAELRVGEQLEGEFGLYTRWLHLKCAWFTGIQSPEDVAGWAALDEESQDAIADRLDKTQSEVAVDMRPVDPNECVRAAWTEKAATPVDIRLPLLPYQQEGLAWMLHQEKSDHR 304
BLAST of mRNA_F-serratus_M_contig6186.16982.1 vs. uniprot
Match: A0A836CRA2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA2_9STRA) HSP 1 Score: 100 bits (250), Expect = 4.160e-22 Identity = 43/90 (47.78%), Postives = 65/90 (72.22%), Query Frame = 1
Query: 124 TQWHHLQCTIFRVKKVEEIEGFNDLDDALLPILEEQVKKSQGEVDDMYEPITPDDLVRKEWSEKAQCPRDVMATLLPYQQEGLAWMLNQE 393
T WHHL C + +IEG++DL + +L+E+V +S+G+VD++Y+PI PDDL+RK W +KA P ++++ LLPYQ EGL W+L+QE
Sbjct: 2 TAWHHLACVVPHCNTAADIEGYDDLPEEQQQVLQERVDESRGQVDELYQPINPDDLIRKAWDKKAPQPPELLSPLLPYQLEGLGWLLHQE 91
BLAST of mRNA_F-serratus_M_contig6186.16982.1 vs. uniprot
Match: W6KR75_9TRYP (Uncharacterized protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KR75_9TRYP) HSP 1 Score: 85.5 bits (210), Expect = 1.010e-16 Identity = 50/141 (35.46%), Postives = 76/141 (53.90%), Query Frame = 1
Query: 10 YVWEIAKTSRAMCRRCDDKISKGALKIGV---VTEGSWGPSTQWHHLQCTIFRVKKVEEIEGFNDLDDALLPILEEQVKKSQGEVDDMYEP-----ITPDDLVRKEWSEKAQCPRDVMATLLPYQQEGLAWMLNQEKLDYK 408
Y+ + + ++RA CR+C I+KG + G+ G +G + W HL CT ++EE E + + E Q K+ EV P + PDDL+++ E+A+ P++V+ TLLPYQ+EGL WML QE D K
Sbjct: 30 YIIQQSPSARARCRKCSQYINKGEFRCGIPVRFASGEYGWISAWQHLGCT-----RIEESEDLTKVMHGFAQLEEMQRKEIISEVTSSETPEHLRTLDPDDLIKRRKLEEAETPKEVLRTLLPYQREGLNWMLAQECSDAK 165
BLAST of mRNA_F-serratus_M_contig6186.16982.1 vs. uniprot
Match: W6LGR0_9TRYP (Uncharacterized protein n=1 Tax=Phytomonas sp. isolate Hart1 TaxID=134013 RepID=W6LGR0_9TRYP) HSP 1 Score: 78.6 bits (192), Expect = 2.690e-14 Identity = 45/141 (31.91%), Postives = 75/141 (53.19%), Query Frame = 1
Query: 10 YVWEIAKTSRAMCRRCDDKISKGALKIGVVTEGSWGPS---TQWHHLQCTIFRVKKVEEIEGFNDLDDALLPILEEQVKK-----SQGEVDDMYEPITPDDLVRKEWSEKAQCPRDVMATLLPYQQEGLAWMLNQEKLDYK 408
Y+ + + +SRA CR+C I KG + G+ + G + + W HL CT ++EE E + + E +K + E+ + + + +DL+++ E+A+ P++V+ TLLPYQ+EGL WML QE D K
Sbjct: 30 YILQKSPSSRARCRKCSQCIDKGEFRCGIPVRFAGGENGWISAWQHLGCT-----RLEESENLTKVMHGFAQLKESDKEKVILEVTSSEIPEHLKSLDTEDLIKRMRLEEAETPKEVLRTLLPYQKEGLNWMLAQEHSDTK 165
BLAST of mRNA_F-serratus_M_contig6186.16982.1 vs. uniprot
Match: A0A836IQE8_9TRYP (Uncharacterized protein n=4 Tax=Mundinia TaxID=2249475 RepID=A0A836IQE8_9TRYP) HSP 1 Score: 78.2 bits (191), Expect = 3.680e-14 Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = 1
Query: 10 YVWEIAKTSRAMCRRCDDKISKGALKIGVVTEGSWGPS---TQWHHLQCTIFRVKKVEEIEGFNDLDDALLPILEEQV--KKSQGEVDDMYEPITPDDLVRKEWSEKAQCPRDVMATLLPYQQEGLAWMLNQE 393
Y+ + + T+RA CR+C I KG +++GV + G + + W HL CT ++E E +L P +E V + + EV + +P+ PDDLV + E+ P ++ LLPYQ+EGL WM+ QE
Sbjct: 30 YIVQKSPTARARCRKCSQLIPKGDMRVGVPIRHNAGDNGWISAWQHLGCTRMEKSELEHYESTMHGFASLKPEEQEHVVNEVNSTEVPEHLKPLDPDDLVHRGKMEQMAPPSTLLRHLLPYQKEGLGWMVRQE 162
BLAST of mRNA_F-serratus_M_contig6186.16982.1 vs. uniprot
Match: A0A0S4IWJ2_BODSA (DNA repair protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IWJ2_BODSA) HSP 1 Score: 77.0 bits (188), Expect = 9.260e-14 Identity = 44/134 (32.84%), Postives = 73/134 (54.48%), Query Frame = 1
Query: 10 YVWEIAKTSRAMCRRCDDKISKGALKIGVVTE---GSWGPSTQWHHLQCTIFRVKKV--EEIEGFNDLDDALLPILEEQVKKSQGEVDDMYEPITPDDLVRKEWSEKAQCPRDVMATLLPYQQEGLAWMLNQEK 396
YV E+A++ RA CR+C D I K +++ GV G +G + W HL+C+ K + ++ GF+ L + E+V + +E + PDDLV++ A+ P + LLP+Q+EG+ WM+ QE+
Sbjct: 56 YVVEVARSGRARCRKCSDMILKDSIRFGVPIRDPRGEYGYISAWQHLKCSRVEDKSLIPNQLFGFDALSKVEQDSVVEEVTRDDAPAH--FEALNPDDLVKRGKLPHAELPPTLTQHLLPFQREGVWWMVQQEE 187 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6186.16982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6186.16982.1 >prot_F-serratus_M_contig6186.16982.1 ID=prot_F-serratus_M_contig6186.16982.1|Name=mRNA_F-serratus_M_contig6186.16982.1|organism=Fucus serratus male|type=polypeptide|length=135bp MTYVWEIAKTSRAMCRRCDDKISKGALKIGVVTEGSWGPSTQWHHLQCTIback to top mRNA from alignment at F-serratus_M_contig6186:24748..26740+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6186.16982.1 ID=mRNA_F-serratus_M_contig6186.16982.1|Name=mRNA_F-serratus_M_contig6186.16982.1|organism=Fucus serratus male|type=mRNA|length=1993bp|location=Sequence derived from alignment at F-serratus_M_contig6186:24748..26740+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6186:24748..26740+ >mRNA_F-serratus_M_contig6186.16982.1 ID=mRNA_F-serratus_M_contig6186.16982.1|Name=mRNA_F-serratus_M_contig6186.16982.1|organism=Fucus serratus male|type=CDS|length=810bp|location=Sequence derived from alignment at F-serratus_M_contig6186:24748..26740+ (Fucus serratus male)back to top |