mRNA_F-serratus_M_contig617.16965.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig617.16965.1 vs. uniprot
Match: D7FHF6_ECTSI (Ribosomal protein L37 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF6_ECTSI) HSP 1 Score: 153 bits (387), Expect = 6.510e-47 Identity = 74/87 (85.06%), Postives = 79/87 (90.80%), Query Frame = 1
Query: 4 TKGTASFGKRHTKTHTTCRRCGRTSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTEGTGRMRYMKSLPRRFKNGFREGSTAPKSG 264
TKGTASFGKRH KTHT CRRCGRTSFHKQKK C+SCGYP KMRRFNWSEKAKRRRT+GTGRMR MK+LPRRFKNGF EG +APK+G
Sbjct: 2 TKGTASFGKRHNKTHTACRRCGRTSFHKQKKVCSSCGYPGTKMRRFNWSEKAKRRRTQGTGRMRSMKTLPRRFKNGFHEGGSAPKNG 88
BLAST of mRNA_F-serratus_M_contig617.16965.1 vs. uniprot
Match: A0A835Z4E6_9STRA (Ribosomal protein L37 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4E6_9STRA) HSP 1 Score: 150 bits (380), Expect = 8.080e-46 Identity = 71/83 (85.54%), Postives = 80/83 (96.39%), Query Frame = 1
Query: 4 TKGTASFGKRHTKTHTTCRRCGRTSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTEGTGRMRYMKSLPRRFKNGFREGSTA 252
TKGT+SFGKRHTKTHT CRRCG+TSFHKQKKTC+SCGYPAAKMRRFNW+ KAKRRRTEGTGRMR++K++PRRFKNGFREG+ A
Sbjct: 2 TKGTSSFGKRHTKTHTACRRCGKTSFHKQKKTCSSCGYPAAKMRRFNWAAKAKRRRTEGTGRMRHLKTMPRRFKNGFREGTVA 84
BLAST of mRNA_F-serratus_M_contig617.16965.1 vs. uniprot
Match: F0YBC4_AURAN (Ribosomal protein L37 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBC4_AURAN) HSP 1 Score: 144 bits (363), Expect = 3.070e-43 Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 1
Query: 7 KGTASFGKRHTKTHTTCRRCGRTSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTEGTGRMRYMKSLPRRFKNGFREGS-TAPKS 261
KGT+SFGKRH+KTHTTCRRCG+ SFH QKK C+SCGYP AKMRRFNWSEK RRRT+GTGRMRYMKSLPRRFKNGFREG+ APK+
Sbjct: 1 KGTSSFGKRHSKTHTTCRRCGKVSFHIQKKVCSSCGYPGAKMRRFNWSEKGLRRRTQGTGRMRYMKSLPRRFKNGFREGTQAAPKA 86
BLAST of mRNA_F-serratus_M_contig617.16965.1 vs. uniprot
Match: A0A7S4A793_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A793_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.160e-41 Identity = 69/84 (82.14%), Postives = 76/84 (90.48%), Query Frame = 1
Query: 1 QTKGTASFGKRHTKTHTTCRRCGRTSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTEGTGRMRYMKSLPRRFKNGFREGSTA 252
QTKGT+SFGKRH+KTHTTCRRCG+ SFH QKK CASCGYP AKMRRFNWSEKA RRRT GTGRMR+M+ +PRRFKNGFREG+ A
Sbjct: 109 QTKGTSSFGKRHSKTHTTCRRCGKVSFHLQKKVCASCGYPGAKMRRFNWSEKALRRRTNGTGRMRHMRHMPRRFKNGFREGTQA 192
BLAST of mRNA_F-serratus_M_contig617.16965.1 vs. uniprot
Match: K8YX48_NANGC (Ribosomal protein L37 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YX48_NANGC) HSP 1 Score: 139 bits (351), Expect = 2.200e-41 Identity = 66/84 (78.57%), Postives = 76/84 (90.48%), Query Frame = 1
Query: 4 TKGTASFGKRHTKTHTTCRRCGRTSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTEGTGRMRYMKSLPRRFKNGFREGSTAP 255
TKGT+SFGKRHTKTHT CRRCGR +FHKQKK C SCG+P AK+R+FNWSEKAKRR+T GTGR ++KSLPRRFKNGFREG++AP
Sbjct: 2 TKGTSSFGKRHTKTHTGCRRCGRITFHKQKKACGSCGFPEAKIRKFNWSEKAKRRKTTGTGRTAHLKSLPRRFKNGFREGTSAP 85
BLAST of mRNA_F-serratus_M_contig617.16965.1 vs. uniprot
Match: A0A372QVR8_9GLOM (Ribosomal protein L37 n=7 Tax=Glomeromycetes TaxID=214506 RepID=A0A372QVR8_9GLOM) HSP 1 Score: 139 bits (351), Expect = 2.340e-41 Identity = 67/85 (78.82%), Postives = 74/85 (87.06%), Query Frame = 1
Query: 4 TKGTASFGKRHTKTHTTCRRCGRTSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTEGTGRMRYMKSLPRRFKNGFREGSTAPK 258
TKGT+SFGKRHTKTHT CRRCGR +FH QKKTCA CGYP+AK R +NWSEK KRR+T GTGRMRY+K LPRRFKNGFREG+ A K
Sbjct: 2 TKGTSSFGKRHTKTHTLCRRCGRRAFHNQKKTCAQCGYPSAKTRSYNWSEKGKRRKTTGTGRMRYLKHLPRRFKNGFREGTQAVK 86
BLAST of mRNA_F-serratus_M_contig617.16965.1 vs. uniprot
Match: A0A1Y1Y1Y3_9FUNG (Ribosomal protein L37 n=3 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y1Y3_9FUNG) HSP 1 Score: 137 bits (345), Expect = 1.760e-40 Identity = 66/85 (77.65%), Postives = 74/85 (87.06%), Query Frame = 1
Query: 4 TKGTASFGKRHTKTHTTCRRCGRTSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTEGTGRMRYMKSLPRRFKNGFREGSTAPK 258
TKGT SFGKRHTK+HT CRRCG+ SFH QKKTCASCGYPAAK+R FNW +KAKRR+T GTGRMRY+K + RRFKNGFREG+ A K
Sbjct: 2 TKGTQSFGKRHTKSHTLCRRCGKRSFHNQKKTCASCGYPAAKIRSFNWGQKAKRRKTTGTGRMRYLKDVSRRFKNGFREGTQAQK 86
BLAST of mRNA_F-serratus_M_contig617.16965.1 vs. uniprot
Match: A0A1Y1XS31_9FUNG (Ribosomal protein L37 n=4 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XS31_9FUNG) HSP 1 Score: 137 bits (345), Expect = 1.760e-40 Identity = 66/85 (77.65%), Postives = 74/85 (87.06%), Query Frame = 1
Query: 4 TKGTASFGKRHTKTHTTCRRCGRTSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTEGTGRMRYMKSLPRRFKNGFREGSTAPK 258
TKGT SFGKRHTK+HT CRRCG+ SFH QKKTCASCGYPAAK+R FNW +KAKRR+T GTGRMRY+K + RRFKNGFREG+ A K
Sbjct: 2 TKGTQSFGKRHTKSHTLCRRCGKRSFHNQKKTCASCGYPAAKIRSFNWGQKAKRRKTTGTGRMRYLKEVSRRFKNGFREGTQAQK 86
BLAST of mRNA_F-serratus_M_contig617.16965.1 vs. uniprot
Match: A0A077WXY2_9FUNG (Ribosomal protein L37 n=6 Tax=Lichtheimia TaxID=688353 RepID=A0A077WXY2_9FUNG) HSP 1 Score: 137 bits (345), Expect = 2.110e-40 Identity = 68/85 (80.00%), Postives = 74/85 (87.06%), Query Frame = 1
Query: 4 TKGTASFGKRHTKTHTTCRRCGRTSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTEGTGRMRYMKSLPRRFKNGFREGSTAPK 258
TKGT SFGKR TK+HT CRRCG+ SFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRT GTGRM ++K + RRF NGFREG+ A K
Sbjct: 10 TKGTTSFGKRQTKSHTLCRRCGKRSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTTGTGRMSHLKKVHRRFTNGFREGTQAKK 94
BLAST of mRNA_F-serratus_M_contig617.16965.1 vs. uniprot
Match: A0A0F7SK53_PHARH (Ribosomal protein L37 n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SK53_PHARH) HSP 1 Score: 137 bits (344), Expect = 2.280e-40 Identity = 65/85 (76.47%), Postives = 75/85 (88.24%), Query Frame = 1
Query: 4 TKGTASFGKRHTKTHTTCRRCGRTSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTEGTGRMRYMKSLPRRFKNGFREGSTAPK 258
TKGT+SFGKRHTKTHT CRRCG +FH+QKKTCA CGYPAAKMR FNW EKAKRR+T GTGRM+++K + RRFKNGFREG++A K
Sbjct: 2 TKGTSSFGKRHTKTHTICRRCGNRAFHRQKKTCAQCGYPAAKMRSFNWGEKAKRRKTTGTGRMQHLKDVSRRFKNGFREGTSATK 86 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig617.16965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig617.16965.1 >prot_F-serratus_M_contig617.16965.1 ID=prot_F-serratus_M_contig617.16965.1|Name=mRNA_F-serratus_M_contig617.16965.1|organism=Fucus serratus male|type=polypeptide|length=88bp QTKGTASFGKRHTKTHTTCRRCGRTSFHKQKKTCASCGYPAAKMRRFNWSback to top mRNA from alignment at F-serratus_M_contig617:233347..234381+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig617.16965.1 ID=mRNA_F-serratus_M_contig617.16965.1|Name=mRNA_F-serratus_M_contig617.16965.1|organism=Fucus serratus male|type=mRNA|length=1035bp|location=Sequence derived from alignment at F-serratus_M_contig617:233347..234381+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig617:233347..234381+ >mRNA_F-serratus_M_contig617.16965.1 ID=mRNA_F-serratus_M_contig617.16965.1|Name=mRNA_F-serratus_M_contig617.16965.1|organism=Fucus serratus male|type=CDS|length=528bp|location=Sequence derived from alignment at F-serratus_M_contig617:233347..234381+ (Fucus serratus male)back to top |