mRNA_F-serratus_M_contig6.16625.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6.16625.1 vs. uniprot
Match: A0A7S2G4U7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G4U7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.360e-16 Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 3
Query: 1260 YAERWFKFSAEPPESIRHGDIPWLPRLSPLSGGGYLGRSRMDSWSQRDDGQKEKFETLGVNEGDSIDVKKAALRAASLRWHPDKFMSKYGPKIAVEDRGKIANDVQATMQRITELKERL 1616
YA RW +F SI + DIPW+P L+ G DDG EKF+ LG+++ + + KK A+RAASLRWHPDKF +G ++ +DRG++ V+ QRI +LK+RL
Sbjct: 8 YALRWTEFLRPSDASISYDDIPWIPVLAETRLG-------------MDDGV-EKFDILGISDHATHEEKKQAVRAASLRWHPDKFTQAFGRRLLEKDRGRVMESVKLMSQRINQLKDRL 112
BLAST of mRNA_F-serratus_M_contig6.16625.1 vs. uniprot
Match: D8LIB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB6_ECTSI) HSP 1 Score: 57.4 bits (137), Expect = 4.310e-7 Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 3
Query: 1515 MSKYGPKIAVEDRGKIANDVQATMQRITELKERLLHEQAD 1634
MSKY P+IA EDR I DVQATMQRIT+L+ERL H+Q D
Sbjct: 1 MSKYAPRIAAEDRASIEKDVQATMQRITKLRERLHHQQGD 40 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6.16625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6.16625.1 >prot_F-serratus_M_contig6.16625.1 ID=prot_F-serratus_M_contig6.16625.1|Name=mRNA_F-serratus_M_contig6.16625.1|organism=Fucus serratus male|type=polypeptide|length=555bp MADVLAREAEEKACSREAIAALRRRAMKSKPVKAPGTIKPSAIRDPPRATback to top mRNA from alignment at F-serratus_M_contig6:1244766..1251555- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6.16625.1 ID=mRNA_F-serratus_M_contig6.16625.1|Name=mRNA_F-serratus_M_contig6.16625.1|organism=Fucus serratus male|type=mRNA|length=6790bp|location=Sequence derived from alignment at F-serratus_M_contig6:1244766..1251555- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6:1244766..1251555- >mRNA_F-serratus_M_contig6.16625.1 ID=mRNA_F-serratus_M_contig6.16625.1|Name=mRNA_F-serratus_M_contig6.16625.1|organism=Fucus serratus male|type=CDS|length=3330bp|location=Sequence derived from alignment at F-serratus_M_contig6:1244766..1251555- (Fucus serratus male)back to top |