mRNA_F-serratus_M_contig6.16625.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6.16625.1
Unique NamemRNA_F-serratus_M_contig6.16625.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig6.16625.1 vs. uniprot
Match: A0A7S2G4U7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G4U7_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.360e-16
Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 3
Query: 1260 YAERWFKFSAEPPESIRHGDIPWLPRLSPLSGGGYLGRSRMDSWSQRDDGQKEKFETLGVNEGDSIDVKKAALRAASLRWHPDKFMSKYGPKIAVEDRGKIANDVQATMQRITELKERL 1616
            YA RW +F      SI + DIPW+P L+    G              DDG  EKF+ LG+++  + + KK A+RAASLRWHPDKF   +G ++  +DRG++   V+   QRI +LK+RL
Sbjct:    8 YALRWTEFLRPSDASISYDDIPWIPVLAETRLG-------------MDDGV-EKFDILGISDHATHEEKKQAVRAASLRWHPDKFTQAFGRRLLEKDRGRVMESVKLMSQRINQLKDRL 112          
BLAST of mRNA_F-serratus_M_contig6.16625.1 vs. uniprot
Match: D8LIB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB6_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 4.310e-7
Identity = 28/40 (70.00%), Postives = 32/40 (80.00%), Query Frame = 3
Query: 1515 MSKYGPKIAVEDRGKIANDVQATMQRITELKERLLHEQAD 1634
            MSKY P+IA EDR  I  DVQATMQRIT+L+ERL H+Q D
Sbjct:    1 MSKYAPRIAAEDRASIEKDVQATMQRITKLRERLHHQQGD 40          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6.16625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2G4U7_9STRA1.360e-1641.18Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D8LIB6_ECTSI4.310e-770.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6contigF-serratus_M_contig6:1244766..1251555 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDnaJ domain
Ec32 orthologEc-24_001530.1
Exons12
Model size2546
Cds size1665
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6.16625.1prot_F-serratus_M_contig6.16625.1Fucus serratus malepolypeptideF-serratus_M_contig6 1245591..1251499 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931843.9835448-UTR-F-serratus_M_contig6:1244765..12455901622931843.9835448-UTR-F-serratus_M_contig6:1244765..1245590Fucus serratus maleUTRF-serratus_M_contig6 1244766..1245590 -
1690964022.3458688-UTR-F-serratus_M_contig6:1244765..12455901690964022.3458688-UTR-F-serratus_M_contig6:1244765..1245590Fucus serratus maleUTRF-serratus_M_contig6 1244766..1245590 -
1622931844.2978096-UTR-F-serratus_M_contig6:1251499..12515551622931844.2978096-UTR-F-serratus_M_contig6:1251499..1251555Fucus serratus maleUTRF-serratus_M_contig6 1251500..1251555 -
1690964022.5055683-UTR-F-serratus_M_contig6:1251499..12515551690964022.5055683-UTR-F-serratus_M_contig6:1251499..1251555Fucus serratus maleUTRF-serratus_M_contig6 1251500..1251555 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931844.0602028-CDS-F-serratus_M_contig6:1245590..12457431622931844.0602028-CDS-F-serratus_M_contig6:1245590..1245743Fucus serratus maleCDSF-serratus_M_contig6 1245591..1245743 -
1690964022.35935-CDS-F-serratus_M_contig6:1245590..12457431690964022.35935-CDS-F-serratus_M_contig6:1245590..1245743Fucus serratus maleCDSF-serratus_M_contig6 1245591..1245743 -
1622931844.0808215-CDS-F-serratus_M_contig6:1246288..12463871622931844.0808215-CDS-F-serratus_M_contig6:1246288..1246387Fucus serratus maleCDSF-serratus_M_contig6 1246289..1246387 -
1690964022.3730547-CDS-F-serratus_M_contig6:1246288..12463871690964022.3730547-CDS-F-serratus_M_contig6:1246288..1246387Fucus serratus maleCDSF-serratus_M_contig6 1246289..1246387 -
1622931844.0951233-CDS-F-serratus_M_contig6:1246805..12469651622931844.0951233-CDS-F-serratus_M_contig6:1246805..1246965Fucus serratus maleCDSF-serratus_M_contig6 1246806..1246965 -
1690964022.3841412-CDS-F-serratus_M_contig6:1246805..12469651690964022.3841412-CDS-F-serratus_M_contig6:1246805..1246965Fucus serratus maleCDSF-serratus_M_contig6 1246806..1246965 -
1622931844.1074083-CDS-F-serratus_M_contig6:1247179..12473041622931844.1074083-CDS-F-serratus_M_contig6:1247179..1247304Fucus serratus maleCDSF-serratus_M_contig6 1247180..1247304 -
1690964022.3952584-CDS-F-serratus_M_contig6:1247179..12473041690964022.3952584-CDS-F-serratus_M_contig6:1247179..1247304Fucus serratus maleCDSF-serratus_M_contig6 1247180..1247304 -
1622931844.1478539-CDS-F-serratus_M_contig6:1247692..12478521622931844.1478539-CDS-F-serratus_M_contig6:1247692..1247852Fucus serratus maleCDSF-serratus_M_contig6 1247693..1247852 -
1690964022.4065032-CDS-F-serratus_M_contig6:1247692..12478521690964022.4065032-CDS-F-serratus_M_contig6:1247692..1247852Fucus serratus maleCDSF-serratus_M_contig6 1247693..1247852 -
1622931844.1664624-CDS-F-serratus_M_contig6:1248068..12482261622931844.1664624-CDS-F-serratus_M_contig6:1248068..1248226Fucus serratus maleCDSF-serratus_M_contig6 1248069..1248226 -
1690964022.418674-CDS-F-serratus_M_contig6:1248068..12482261690964022.418674-CDS-F-serratus_M_contig6:1248068..1248226Fucus serratus maleCDSF-serratus_M_contig6 1248069..1248226 -
1622931844.1882505-CDS-F-serratus_M_contig6:1248607..12487281622931844.1882505-CDS-F-serratus_M_contig6:1248607..1248728Fucus serratus maleCDSF-serratus_M_contig6 1248608..1248728 -
1690964022.4436245-CDS-F-serratus_M_contig6:1248607..12487281690964022.4436245-CDS-F-serratus_M_contig6:1248607..1248728Fucus serratus maleCDSF-serratus_M_contig6 1248608..1248728 -
1622931844.2040944-CDS-F-serratus_M_contig6:1248918..12490291622931844.2040944-CDS-F-serratus_M_contig6:1248918..1249029Fucus serratus maleCDSF-serratus_M_contig6 1248919..1249029 -
1690964022.4552915-CDS-F-serratus_M_contig6:1248918..12490291690964022.4552915-CDS-F-serratus_M_contig6:1248918..1249029Fucus serratus maleCDSF-serratus_M_contig6 1248919..1249029 -
1622931844.2211893-CDS-F-serratus_M_contig6:1249325..12493821622931844.2211893-CDS-F-serratus_M_contig6:1249325..1249382Fucus serratus maleCDSF-serratus_M_contig6 1249326..1249382 -
1690964022.4665165-CDS-F-serratus_M_contig6:1249325..12493821690964022.4665165-CDS-F-serratus_M_contig6:1249325..1249382Fucus serratus maleCDSF-serratus_M_contig6 1249326..1249382 -
1622931844.2346802-CDS-F-serratus_M_contig6:1249655..12499251622931844.2346802-CDS-F-serratus_M_contig6:1249655..1249925Fucus serratus maleCDSF-serratus_M_contig6 1249656..1249925 -
1690964022.4766998-CDS-F-serratus_M_contig6:1249655..12499251690964022.4766998-CDS-F-serratus_M_contig6:1249655..1249925Fucus serratus maleCDSF-serratus_M_contig6 1249656..1249925 -
1622931844.2667198-CDS-F-serratus_M_contig6:1250714..12508941622931844.2667198-CDS-F-serratus_M_contig6:1250714..1250894Fucus serratus maleCDSF-serratus_M_contig6 1250715..1250894 -
1690964022.4879918-CDS-F-serratus_M_contig6:1250714..12508941690964022.4879918-CDS-F-serratus_M_contig6:1250714..1250894Fucus serratus maleCDSF-serratus_M_contig6 1250715..1250894 -
1622931844.2852592-CDS-F-serratus_M_contig6:1251428..12514991622931844.2852592-CDS-F-serratus_M_contig6:1251428..1251499Fucus serratus maleCDSF-serratus_M_contig6 1251429..1251499 -
1690964022.497144-CDS-F-serratus_M_contig6:1251428..12514991690964022.497144-CDS-F-serratus_M_contig6:1251428..1251499Fucus serratus maleCDSF-serratus_M_contig6 1251429..1251499 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6.16625.1

>prot_F-serratus_M_contig6.16625.1 ID=prot_F-serratus_M_contig6.16625.1|Name=mRNA_F-serratus_M_contig6.16625.1|organism=Fucus serratus male|type=polypeptide|length=555bp
MADVLAREAEEKACSREAIAALRRRAMKSKPVKAPGTIKPSAIRDPPRAT
TVVAAKLAMAASHNPKCPERRVRNLHPLPDGLHSSCPRMRKEEVQRRGSS
CPSTESTAPANVETVDRSSTDACPPSSACDADGDSVEEAVGWTSFTGRRQ
RGRGRGGSILQRVKATGVFPNRLSCGYCRKVFRVEILNRHEERCPSRNLE
LFATPCVACGFQGPRCACWALRNGLLKVIRPSLQKPLFNLFKDSTRLSKD
NAAATNGDYVTKSPAAGTGKAILGLRGGWAAGGGLRRPVPLVDVRGDSND
GQAHRETAEERWKRERDEWLFGSVTRDPSASKEPRGDQPSTPSKPRAPSY
DPSDGDGGREVHDLNQSDAAREKDDKAFLMRERVQMNSYFDRIRDAARVR
QYAERWFKFSAEPPESIRHGDIPWLPRLSPLSGGGYLGRSRMDSWSQRDD
GQKEKFETLGVNEGDSIDVKKAALRAASLRWHPDKFMSKYGPKIAVEDRG
KIANDVQATMQRITELKERLLHEQADAARTKAHLFPPGIVHMSPGSAMAA
TPRS*
back to top

mRNA from alignment at F-serratus_M_contig6:1244766..1251555-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6.16625.1 ID=mRNA_F-serratus_M_contig6.16625.1|Name=mRNA_F-serratus_M_contig6.16625.1|organism=Fucus serratus male|type=mRNA|length=6790bp|location=Sequence derived from alignment at F-serratus_M_contig6:1244766..1251555- (Fucus serratus male)
GTAACGGTCATGTGGGTTTCTCGTTTTTTGACACCGTTGGAGCTGTCGGT GGGAAAATGGCGGACGTTCTTGCGCGAGAAGCAGAAGAGAAAGCCTGTAG CCGTGAAGCAATCGCTGCTCTAAGGAGGTGAAATGTCCTTATCGTCGTCT CATGAAGAGCCCGCCGTTGTTTTGCGATCTCGCGCTGGTTTTCCTGAGGT TACAGCTCCATAACGCAGGATATAAAAGTTGCACTGAAAGATTCGATCGA TATCATAGGCAGTACGGTTGCCCACAACATGATTATTTCTCGTGGGATCC GAACGGAAAATAGACGCATACTACGCAAGCAAGGTGATACAACGGAGATA TTTGGATAGGCGAAGTACAGACGCAAAACGATGTGTCTCCAATTTGGAGC GAAATATTAACAGCTCAGACAACAACTTTCCCCCCTGCTTATGGGGGATG CTTTAAAAGGTCCAGATGCGTTCAGATTTTTCTTCAAACATAATATCGTT GGCGTTTGAGGCAACGACAGACTACACCGAAACCACCATATACAACCGCT TATTCCTATACATGAACACGTGCTGCAGAATCCGAGCATTGTCTTACGCC GGTTGCCCGTCACACCCCAAAATAAGTTTTTTGGCGATGCTCTGCGTTGT TGCGGTGGCAGGCGTGCGATGAAAAGTAAACCAGTAAAAGCACCGGGGAC CATCAAACCATCGGCTATACGCGACCCACCGCGCGCGACAACAGTAGTGG CCGCCAAGTTGGCGATGGCGGCGTCTCACAACCCGAAGTGTCCCGAGCGT CGCGTCAGGAATCTCCACCCATTACCGGACGGTCTGCACAGGTGCTCACT AGCTGGTGTTCCCCGCGTGCGAAACGCTTTTTAATACTACTAAAATATCA TATTTCAGCCTTTGCCCTGTTGTCTGACGGTGTCGTATCCGTGGCGTCGA ATTGGACTCGATTCAATTTCTCTATATTTTGTTACGAAATAGTACATTCC CCCCCGCCTTATTCCTTCGAGGAATATATGTTGGACGTGTCGGCCGTAAT TAATTAACAAATGTGATGCCTCCCGAAATACAAAGCCACTCTAGCTGCTT TGACTTGATGCCCTCATAAGATAAGCCTTCGATCGCATCTGACTGCCCGC TTATGATAGTCACGGGATATGCAAAGTTTTGGGGGTGGAGAGCATTACAT ACCAGGGTCGTCTACCGGGTATCCTCGTAGCGCACCATACCTTAACTCTT CATTTTTTTTCAAAGCGCTTGCGCAAGTTATGTCAACATTTTTTCCGCAG AAAATTTTGAGGAAAGGTTCCGGAAGGCGCGTGCCTACCGTACGTTTCCC TACCCGTGCAAGTAGTAAGAAGTTCAAGGCGACGGTACCGTCTCTTCAAC TTCGGCTGAACCGATTTTTCCAATCTCGCTCGCGCATGATATGGCGATGC GTTTGCGTCAGTCATAACGGAGACCCGTGGTTGAACAACGGTGTGTTTTC CGTTGTTGAACAACGATATGTTTTTCGCGACCCTCACAGCCACTAGCAAT GGAAAACACCCTGCCCAGTCGGCCCGCTCTCTAGCTTGACGTGTCACGAT TCCGACAACCCGAACTCGCCACGCATCCAGCTCGTGCCCCCGGATGAGAA AGGAGGAAGTTCAGCGACGGGGAAGTAGTTGCCCTTCGACTGAATCGACC GCTCCGGCTAATGTAGAGACCGTGGATCGCAGCTCTACCGATGCATGTCC GCCATCGTCTGCTTGTGACGCGGACGGTGATTCGGTGGAGGAAGCAGTCG GGTGGACGTCATTTACGGGGAGGAGACAACGTGGGCGAGGAAGGGGAGGC AGTATTCTTCAACGGGTAAAAGCAACGGGTGTCTTTCCGAACAGGCTCAG GTGCGCCATGCCTTCCCATTCCTCCTCGTCCTCAATGGGTGCCCACGAAG GGATAGATTCGAACAACCGCTGTGGCAAACCCGGGCGGTTCATTCGAATT TGATGCGCCAACTTCATATGTTGAGAGAACACGGTTAACACCTCCTTTAT TTCCGCCGAGGTTTCATCAGGCCGGAAACGCTCAGCCTGAACATATTGTC GATCTGCGAGTGTGTCTTTTTTCTCTCTAACTTGTACCACACCACCTCTA CGGTACCTCCTCTTCCACTGCAGCTGTGGCTACTGCCGAAAGGTCTTTCG CGTTGAGATTCTCAATAGGCACGAGGAAAGGTGAAAGATACGCCCGGCTC GTCTTGATTCTCAAGTCTCTCGGTGCGTAGATGGGTTGGTCTTGGCGAGA TAAGAGTACGAAGTGACTTAGGGCAAAAACAAAGTGGCAAAAAAGGATGG GCGGCCGGTGAGAGAGCGCTGCCGACGTAGTCAAGTTCTTTGATTAGATC CGCGGTTCAACCTTCTCGCGCAAGCGCTTGCGTTTTCAGAACTCACCTTG CCCTTTTACTGTACCCTACGTGAGGATCACGCCGTGGGACGACAGCCCGG TACCAACTGCTCCGTTCCTTGCGCAGATGTCCATCTAGAAATCTGGAACT GTTCGCCACACCATGCGTGGCATGCGGCTTTCAAGGGCCGCGATGTGCTT GCTGGGCACTGCGCAACGGGTTGCTCAAGGTAATCAGGCGAGTCCTCTAA AAAAATATGAGAAGATCTAGCACCTCGTAGATCCAGTCGGAGGTAAAGCG TTAATTACGCAAAGCAATCACCCGGTATCAAACATGCGCCACTAAGACAA CCAAATCGAGAACAAGCGACACCGAGACCCAACCATGTTTTTTTTCTGCT CGCGATGTCTGCACCTCGTTTGTTCAGACCGAGCCTTCAAAAGCCACTGT TCAACCTCTTCAAGGACAGCACTAGACTGAGCAAGGACAACGCAGCTGCC ACAAACGGAGACTACGTCACCAAGAGTCCCGCGGCTGGGACGGGAAAGGT GGCGCGGTTACTCCCGCACTCTCTCTCTTTACTATACCTTCGCCTCGTTC ATACCCACGCATCTTTCGTCTATCAAAGCTATTTACTCCGTGTGACATCT TGAGTTCTCCCCGGAGAGTAGTGTGAGAGAGACGTGTAGAATGACAAGGC GGGGGAGAGAGGAAGGAGAGAAACATGTAGCTTTAGAGTGCAAGCCGAAT TTGAAGCAGGAATGGAATCTAAAGCCTGAGAACACGCGACGGTGCATTTT CGCCGTTGGTTTTAGTGGTTGTGATATCTTACAATACATTCCCACAAAGA CGGTGTAAAACAATACCTTTAGCCTCTCCTCCTCACCACAGCGGCTTTCT TGGCCTCTCTCGCGTCTCTTTATCCTCAGGCAATATTGGGGTTACGAGGA GGCTGGGCGGCGGGCGGCGGGCTCAGACGGCCAGTGCCGTTAGTAGACGT CAGAGGTGATTCGAACGACGGGCAGGCCCATAGAGAAACCGCCGAGGAGC GATGGAAGAGGGAAAGGGACGAATGGCTCTTCGGCAGGTGAATTCGCCCG TCCAGCCATTTCGGGGTTGGCGCGTTCAAGATGACCGCAAAGCTCCCCAA GATCGTATTGCACTTTAAGAGTAACCCTGGTTGCCCTTTCGAGTTGAGTA CTGGAGTCCCCACTGCCGCAGGTATCTATTCGGTCGTTGTCCAGATGGAC CGCAGGATCGCAGACCACGTGCGTGCTCCATGGAATTGATCGTCACAACA CAGCGTGACGAGAGATCCTTCGGCTTCAAAGGAACCTCGAGGGGATCAGC CCTCGACCCCATCAAAACCTCGCGCGCCTAGTTATGACCCCTCGGATGGC GACGGAGGTCGGGAAGTGCATGACCTAAACCAGTCAGATGCCGCTCGGGA AAAGGACGATAAGGTGAAAAAACATTGGGGGGGCTGTGCATGCGACTCAA ACGTTACTTTTCAAAAGCTGATCGACCTCGAGATTACCCCGACTGTTTCT TCGGCGCTTACATATGCTTACTCGTAATCAGAAGAGCTCAACCGAATCGT TTCGACGACTCAGCGACTCAGCTCCAAGTGGATCGCGACAATTCTATCAC AGTACTTCGTTCCGGAGTGTGTATTTATTGTAGTTATGCGATATACTGTA GTACTTTATACTATAGTACGATTTTTAAAATATATTTGCAGCACGAAGCA TCTGAAGCCGTAGGCAAACAGAGAGTATAAGAAAGAACACATTGTACGTA TGTACAACACCTGCCTTGCTAACTACCCGTCAACGAACACTACGTGGATA GGCGTTTCTCATGCGGGAGCGTGTGCAGATGAATAGCTACTTTGACAGGA TTCGTGACGCCGCGCGCGTTCGTCAGTACGCCGAGCGGTGGTTTAAGTTC TCCGCTGAACCTCCGGAAAGCATCAGGTAGCTAGCTCAATATCAGGGCCA TCATAGCTAGAAGGAAAGGGGAATATCTTGGTCCAAACGTTTGCAATCAT CGAAGCACCTACCACACACTACCCGAGCGGATTAACCTTACACCACACGC CACTTCATCCTGGCCATTCTTCGTGGCCGAATGCACATTCTTCTGCTCCC CCACGTGCCCGGATCTACGATGGAGAGGGGGGCAATTCAGGCATGGTGAT ATTCCTTGGCTGCCCCGACTTTCACCGCTCTCTGGGGGAGGCTATCTCGG CCGTAGTCGAATGGATTCTTGGTCACAGCGAGACGACGGGCAGAAGGAGA AATTCGAGACTCTAGGTGTTAACGAGGGCGATTCCATCGACGTGAAGAAG GTGTCAGGGGAGAGCTTTGCCAAACGCAGAATGTAACCTCTCGCTGCAAG TCTTGTGGGCCTTACTCCTACTTTGATAGAACAAAACGTTTTACTGGCCA ACGTGAGACGTGGATCTTCCTTTCCAACACCCACGGCTTTTTTACACTGT TCTACTTCAAGGGTTATAACACAGTTCAGTTTTAGGATCGACTTGTTCTT GGGATAAGAAGAACGGTGCGGCATATTGAGAGAAGCGGATGATGCGCGTG CTACCCATACCATCGTAGCCTCTGGGAAGCCTGAGTTGCCAAAGGGTTGT CCTTGGAAGGAAAAACAGATATCGTTATCTACGTTTGATGCATCATGCAT ATGCAACGTCGAGGATTGAACGTCCTCCCTTTCTCTACCCGACCCGCGTT CCCCGTTTGATTTGCCAGGCAGCGCTGAGAGCAGCGAGCCTCAGATGGCA TCCGGACAAATTCATGAGCAAGTACGGCCCGAAGATCGCCGTGGAGGATC GTGGAAAAATTGCAAACGTGAGAAAACTCCTTGTGTGGTGCAAGTGCCTT AACGACCCTGCTGTCGCTTTCGCGCACCGCCCCTTTATGTTGCCCCCGGA TAAGGCGGGGTTGTGACGGACACAGGGAAAGCATTCATTTGACGACGCGG GTCTGGAGACTCTCGCTGTCCATCTTCCCACAAAATTAATACATTCCTAA AACTCTATTCTAGCTACTGTGCTTCAAGGGAGGGGAGAGTATAAACCGTG GCTTCGTTTCGCACAAGAGCTTACTCGACTTATTCGAAGTTGTCTTAGTA CGTACATCCGAAGATTTTAAGGACGGCAAATAAACGCCTCATAAGATGCT CAACGCGACGTCGCCCAGAGGCGCCATTTCGCGCGTCGCGTAGTGAGCAC AGTATCCGTTAGTACTCTCCTTGAGACAGAAATCGGAAACGTTCCATCAT ACACAGTACATCCCCTTCAACCATCCGTCGGCTTCCCGTCCACCAACAGG ACAGTTTGGGTCAGGTACTGAAATTGTTTCCGACTATCATCGACTGACAC GCATCGTACCAGGATGTTCAAGCAACCATGCAGCGCATCACGGAGCTTAA GGAGAGGCTTCTACACGAACAGGCTGACGCGGCCCGTACCAAGGCACATC TCTTTCCGCCTGGGATAGTCCATATGTCCCCGGGATCTGCGATGGCAGCA ACCCCCAGGAGTTGACGGGAAAGGCGCGCACGGGTACACATTTTATTCGT GTATTCTTCTGGGAACCACTCGAAGAGCGCGCGTTGGGAACAGTCTCTCT TTTCGTTCTGTCATTGAAAATTCGTGCCCGCACAGGGCGCGTAAGGTAAC GAGACAGGCTGACTTTGCGGAGTTGTTTCTTGGCCTCGCTGTGGCTTGTG GGCACGCCAAGTATTTCGCGGGTGCGCATTCTCCTGGGAACCACTCGAAG AGCGCGCGTTGGGAAGAGTTCCTCTTTTCGTTCTGCCATTGAAAATTCGC GTCCGCACGGGGCATGTAAGGTAACGAGATAGGTTAACTTCGCAGAGTCG TTTTTCGGCTTCGCACTGGCTTGTGGGCATGCCAAGTATTTGCGGGCGCG TATTCTTCTGGGAACCACTCGAAGAGCGCGCGTTGGGAAGAGTCTCTCTT TTCGTTCTGCCATTGAAAATTCGCGTCCGCACGGGACGTGTAACAAAATA AGATAGGTTAACTTCGCAAAGTATTTCGTCGGCCCCGCTCTGGCTTGTGG GTATGCCAAGTGTTCTGCGGCGCGAGCCTCTCGATTTTTGTCACTCGGGT ACAGTGTTTGATTTTATAGTGCATTCTGCGGTGGAAAATCGAATGGGACT AAAATAATATATGAAAGAGGGCAAAGGGTTCTCTAAACCCCCCTAAAACA CGCCAACTGCTTAATTATTGATTTCCTCCTGACCGCGCTCTGCGGTGGAA ATCGAATAGGATTAAAGTAGCATGTGAAAGAGGTCAAGGGCTTATCTTAA CCACCCTCAAACACGCTGATTGCATAACTATTGATTTCCT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig6:1244766..1251555-

>mRNA_F-serratus_M_contig6.16625.1 ID=mRNA_F-serratus_M_contig6.16625.1|Name=mRNA_F-serratus_M_contig6.16625.1|organism=Fucus serratus male|type=CDS|length=3330bp|location=Sequence derived from alignment at F-serratus_M_contig6:1244766..1251555- (Fucus serratus male)
ATGGCGGACGTTCTTGCGCGAGAAGCAGAAGAGAAAGCCTGTAGCCGTGA
AGCAATCGCTGCTCTAAGGAGATGGCGGACGTTCTTGCGCGAGAAGCAGA
AGAGAAAGCCTGTAGCCGTGAAGCAATCGCTGCTCTAAGGAGGCGTGCGA
TGAAAAGTAAACCAGTAAAAGCACCGGGGACCATCAAACCATCGGCTATA
CGCGACCCACCGCGCGCGACAACAGTAGTGGCCGCCAAGTTGGCGATGGC
GGCGTCTCACAACCCGAAGTGTCCCGAGCGTCGCGTCAGGAATCTCCACC
CATTACCGGACGGTCTGCACAGGCGTGCGATGAAAAGTAAACCAGTAAAA
GCACCGGGGACCATCAAACCATCGGCTATACGCGACCCACCGCGCGCGAC
AACAGTAGTGGCCGCCAAGTTGGCGATGGCGGCGTCTCACAACCCGAAGT
GTCCCGAGCGTCGCGTCAGGAATCTCCACCCATTACCGGACGGTCTGCAC
AGCTCGTGCCCCCGGATGAGAAAGGAGGAAGTTCAGCGACGGGGAAGTAG
TTGCCCTTCGACTGAATCGACCGCTCCGGCTAATGTAGAGACCGTGGATC
GCAGCTCTACCGATGCATGTCCGCCATCGTCTGCTTGTGACGCGGACGGT
GATTCGGTGGAGGAAGCAGTCGGGTGGACGTCATTTACGGGGAGGAGACA
ACGTGGGCGAGGAAGGGGAGGCAGTATTCTTCAACGGGTAAAAGCAACGG
GTGTCTTTCCGAACAGGCTCAGCTCGTGCCCCCGGATGAGAAAGGAGGAA
GTTCAGCGACGGGGAAGTAGTTGCCCTTCGACTGAATCGACCGCTCCGGC
TAATGTAGAGACCGTGGATCGCAGCTCTACCGATGCATGTCCGCCATCGT
CTGCTTGTGACGCGGACGGTGATTCGGTGGAGGAAGCAGTCGGGTGGACG
TCATTTACGGGGAGGAGACAACGTGGGCGAGGAAGGGGAGGCAGTATTCT
TCAACGGGTAAAAGCAACGGGTGTCTTTCCGAACAGGCTCAGCTGTGGCT
ACTGCCGAAAGGTCTTTCGCGTTGAGATTCTCAATAGGCACGAGGAAAGC
TGTGGCTACTGCCGAAAGGTCTTTCGCGTTGAGATTCTCAATAGGCACGA
GGAAAGATGTCCATCTAGAAATCTGGAACTGTTCGCCACACCATGCGTGG
CATGCGGCTTTCAAGGGCCGCGATGTGCTTGCTGGGCACTGCGCAACGGG
TTGCTCAAGGTAATCAGATGTCCATCTAGAAATCTGGAACTGTTCGCCAC
ACCATGCGTGGCATGCGGCTTTCAAGGGCCGCGATGTGCTTGCTGGGCAC
TGCGCAACGGGTTGCTCAAGGTAATCAGACCGAGCCTTCAAAAGCCACTG
TTCAACCTCTTCAAGGACAGCACTAGACTGAGCAAGGACAACGCAGCTGC
CACAAACGGAGACTACGTCACCAAGAGTCCCGCGGCTGGGACGGGAAAGA
CCGAGCCTTCAAAAGCCACTGTTCAACCTCTTCAAGGACAGCACTAGACT
GAGCAAGGACAACGCAGCTGCCACAAACGGAGACTACGTCACCAAGAGTC
CCGCGGCTGGGACGGGAAAGGCAATATTGGGGTTACGAGGAGGCTGGGCG
GCGGGCGGCGGGCTCAGACGGCCAGTGCCGTTAGTAGACGTCAGAGGTGA
TTCGAACGACGGGCAGGCCCATAGAGAAACCGCCGAGGAGCGATGGAAGA
GGGAAAGGGACGAATGGCTCTTCGGCAGGCAATATTGGGGTTACGAGGAG
GCTGGGCGGCGGGCGGCGGGCTCAGACGGCCAGTGCCGTTAGTAGACGTC
AGAGGTGATTCGAACGACGGGCAGGCCCATAGAGAAACCGCCGAGGAGCG
ATGGAAGAGGGAAAGGGACGAATGGCTCTTCGGCAGCGTGACGAGAGATC
CTTCGGCTTCAAAGGAACCTCGAGGGGATCAGCCCTCGACCCCATCAAAA
CCTCGCGCGCCTAGTTATGACCCCTCGGATGGCGACGGAGGTCGGGAAGT
GCATGACCTAAACCAGTCAGATGCCGCTCGGGAAAAGGACGATAAGCGTG
ACGAGAGATCCTTCGGCTTCAAAGGAACCTCGAGGGGATCAGCCCTCGAC
CCCATCAAAACCTCGCGCGCCTAGTTATGACCCCTCGGATGGCGACGGAG
GTCGGGAAGTGCATGACCTAAACCAGTCAGATGCCGCTCGGGAAAAGGAC
GATAAGGCGTTTCTCATGCGGGAGCGTGTGCAGATGAATAGCTACTTTGA
CAGGATTCGTGACGCCGCGCGCGTTCGTCAGTACGCCGAGCGGTGGTTTA
AGTTCTCCGCTGAACCTCCGGAAAGCATCAGGCGTTTCTCATGCGGGAGC
GTGTGCAGATGAATAGCTACTTTGACAGGATTCGTGACGCCGCGCGCGTT
CGTCAGTACGCCGAGCGGTGGTTTAAGTTCTCCGCTGAACCTCCGGAAAG
CATCAGGCATGGTGATATTCCTTGGCTGCCCCGACTTTCACCGCTCTCTG
GGGGAGGCTATCTCGGCCGTAGTCGAATGGATTCTTGGTCACAGCGAGAC
GACGGGCAGAAGGAGAAATTCGAGACTCTAGGTGTTAACGAGGGCGATTC
CATCGACGTGAAGAAGGCATGGTGATATTCCTTGGCTGCCCCGACTTTCA
CCGCTCTCTGGGGGAGGCTATCTCGGCCGTAGTCGAATGGATTCTTGGTC
ACAGCGAGACGACGGGCAGAAGGAGAAATTCGAGACTCTAGGTGTTAACG
AGGGCGATTCCATCGACGTGAAGAAGGCAGCGCTGAGAGCAGCGAGCCTC
AGATGGCATCCGGACAAATTCATGAGCAAGTACGGCCCGAAGATCGCCGT
GGAGGATCGTGGAAAAATTGCAAACGCAGCGCTGAGAGCAGCGAGCCTCA
GATGGCATCCGGACAAATTCATGAGCAAGTACGGCCCGAAGATCGCCGTG
GAGGATCGTGGAAAAATTGCAAACGATGTTCAAGCAACCATGCAGCGCAT
CACGGAGCTTAAGGAGAGGCTTCTACACGAACAGGCTGACGCGGCCCGTA
CCAAGGCACATCTCTTTCCGCCTGGGATAGTCCATATGTCCCCGGGATCT
GCGATGGCAGCAACCCCCAGGAGTTGAGATGTTCAAGCAACCATGCAGCG
CATCACGGAGCTTAAGGAGAGGCTTCTACACGAACAGGCTGACGCGGCCC
GTACCAAGGCACATCTCTTTCCGCCTGGGATAGTCCATATGTCCCCGGGA
TCTGCGATGGCAGCAACCCCCAGGAGTTGA
back to top