mRNA_F-serratus_M_contig6.16614.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6.16614.1 vs. uniprot
Match: A0A6H5KL28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL28_9PHAE) HSP 1 Score: 400 bits (1027), Expect = 1.150e-129 Identity = 224/400 (56.00%), Postives = 268/400 (67.00%), Query Frame = 1
Query: 79 DGMEARLRDARASNDRLSEALLHSNPQDFGFSEDRITLDKLKITVPRGCCAGCGSKFQAEDEKLPGYLQADKLEAFLSRAGASG-----EDL-----ITPEDVDMDPETWVALQTDFGSD-PETVTVTDVKAGDRAHHPLQPRKPPGAVDGTEIS--SGGSNLGRAARDSAALKAVARAPRVEAETVEFEEASLER---------------EDQGMEEKEEHAGDXXXXXXXXDKLVVCQRCHRLRYYGSLEESLRPGFSDSDLLTPQRFVELLGTLKKQRCLIVYLVDLFDFHGTFLYNLPRITGNNPVLVAGNKVDLLPKDLKKERVTKWVRDKCRESGLPAMEMRDVHLISSKLGVGIAPLMRKAREQALRDKRDIYVLGAANVGKSTFINYIIQDR 1194
D M+AR+RDA AS RLS ++ S+ +DFGF D L+KL ITVP GCC GCGSKFQ++D PG+LQ DKL+ L G + ED + ++ DMDPE W+ Q+D +D + D D P VD + S GG LGRA+RD+A L R P A E S + +++G EE+E KL+VCQRC+RLR YGS+E++LRPGFS+SDLLTPQRF+ELLG+++KQRCLI+YLVDLFDFHGTFLYNLP+ITGNNPV+VAGNKVDLLPKDLK++RVTKWVRDKCRESGLP MEMRDVHL+S K GVGI PLMRKAREQALR KRDIYVLGAANVGKSTFINYII+DR
Sbjct: 387 DDMDARIRDAEASRFRLSPEMMASSAEDFGFGRDAADLEKLTITVPTGCCPGCGSKFQSDDPASPGFLQLDKLDDLLGNEGVAATVTTAEDTREAAAVATDEADMDPEAWLEAQSDINTDLXXXXXLADEDXEDDGGDPRGE-----LVDRSYGSPAGGGGGLGRASRDTAVL--AGRTPSTAAAAAGATELSSKEAVAGWGLPGTGMATLDEEGEEEQE--------------KLLVCQRCYRLRNYGSMEDTLRPGFSESDLLTPQRFLELLGSIRKQRCLIIYLVDLFDFHGTFLYNLPKITGNNPVIVAGNKVDLLPKDLKRQRVTKWVRDKCRESGLPDMEMRDVHLVSCKHGVGIPPLMRKAREQALRGKRDIYVLGAANVGKSTFINYIIEDR 765
BLAST of mRNA_F-serratus_M_contig6.16614.1 vs. uniprot
Match: D8LQR2_ECTSI (Lrc5, mitochondrial YqeH-related GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR2_ECTSI) HSP 1 Score: 345 bits (886), Expect = 4.840e-109 Identity = 202/374 (54.01%), Postives = 245/374 (65.51%), Query Frame = 1
Query: 79 DGMEARLRDARASNDRLSEALLHSNPQDFGFSEDRITLDKLKITVPRGCCAGCGSKFQAEDEKLPGYLQADKLEAFL-SRAGAS----GEDL-----ITPEDVDMDPETWVALQTDFGSDPETVTVTDVKAGDRAHHPLQPRKPPGAVDGTEIS------SGGSNLGRAARDSAALKAVARAPR---------VEAETVEFEEA----------SLEREDQGMEEKEEHAGDXXXXXXXXDKLVVCQRCHRLRYYGSLEESLRPGFSDSDLLTPQRFVELLGTLKKQRCLIVYLVDLFDFHGTFLYNLPRITGNNPVLVAGNKVDLLPKDLKKERVTKWVRDKCRESGLPAMEMRDVHLISSKLGVGIAPLMRK 1095
D M+AR+RDA AS RLS ++ S+ +DFGF D L+KL ITVP GCC GCGSKFQ+ED PG+LQ DKL+ L + GA+ ED +T ++ DMDPE W+ Q+D +D + D+ GD PR V+G+ S GG LGRA+RD+A L R P V A + +EA E++G EE+E KL+VCQRC+RLR YGS+E++LRPGFSDSDLLTPQRF+ELLG+++KQRCLI+YLVDLFDFHGTFLYNLP+ITGNNPVLVAGNKVDLLPKDLK++RVTKWVRDKCRESGLP MEMRDVHL+S K GVGI PLMRK
Sbjct: 155 DDMDARIRDAEASRFRLSPEMIASSAEDFGFGRDAADLEKLTITVPTGCCPGCGSKFQSEDPASPGFLQLDKLDGLLGNEVGAATVMTAEDTREAAAVTTDEADMDPEAWLEAQSDINTDLDF----DLDVGDEDDDGGDPRGE--WVEGSYASPAGVPTGGGGGLGRASRDTAVL--AGRTPTXXXXXXXXXVGATELSSKEAVAGWGLPGTGMAALEEEGEEEQE--------------KLLVCQRCYRLRNYGSVEDTLRPGFSDSDLLTPQRFLELLGSIRKQRCLIIYLVDLFDFHGTFLYNLPKITGNNPVLVAGNKVDLLPKDLKRQRVTKWVRDKCRESGLPDMEMRDVHLVSCKHGVGIPPLMRK 506
BLAST of mRNA_F-serratus_M_contig6.16614.1 vs. uniprot
Match: A0A835YJZ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJZ8_9STRA) HSP 1 Score: 227 bits (579), Expect = 8.620e-66 Identity = 104/166 (62.65%), Postives = 134/166 (80.72%), Query Frame = 1
Query: 697 KLVVCQRCHRLRYYGSLEESLRPGFSDSDLLTPQRFVELLGTLKKQRCLIVYLVDLFDFHGTFLYNLPRITGNNPVLVAGNKVDLLPKDLKKERVTKWVRDKCRESGLPAMEMRDVHLISSKLGVGIAPLMRKAREQALRDKRDIYVLGAANVGKSTFINYIIQDR 1194
K VCQRCH+LRY+G ++++LRPG S +LLTP RF ELL L+ CL+VYLVDLFDFHG+FLYNLP I G+NPV++A NKVDLLPKD+ ++RV WV+D+CR GL +EM+DVHLIS K G G+ LM+KARE+A+ D+YV+GAANVGKS+FIN+++QDR
Sbjct: 132 KQTVCQRCHKLRYFGQVDDALRPGVSTHELLTPARFQELLSVLRTTPCLVVYLVDLFDFHGSFLYNLPNIVGDNPVIIAANKVDLLPKDMARDRVRGWVKDECRLRGLRELEMKDVHLISCKTGSGVPSLMKKARERAMELGVDMYVVGAANVGKSSFINHLLQDR 297
BLAST of mRNA_F-serratus_M_contig6.16614.1 vs. uniprot
Match: A0A4D9D9J5_9STRA (G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9J5_9STRA) HSP 1 Score: 202 bits (513), Expect = 3.950e-54 Identity = 89/164 (54.27%), Postives = 128/164 (78.05%), Query Frame = 1
Query: 697 KLVVCQRCHRLRYYGSLEESLRPGFSDSDLLTPQRFVELLGTLKKQRCLIVYLVDLFDFHGTFLYNLPRITGNNPVLVAGNKVDLLPKDLKKERVTKWVRDKCRESGLPAMEMRDVHLISSKLGVGIAPLMRKAREQALRDKRDIYVLGAANVGKSTFINYIIQ 1188
+ V+CQRCH+L++YG +E++LRPG+S ++LLTP+RF EL+ ++++RC +V LVD+FDFHG+ LYNLPRI G+NPVLVA NK DLLP D ++RV WV+ + + G+ + RD+HLIS K G + PL+R ++ A + +RD+YV+GAANVGKSTFIN +I+
Sbjct: 461 RAVICQRCHKLKHYGDVEDALRPGWSANELLTPERFRELVSVVRRKRCAVVCLVDIFDFHGSLLYNLPRIVGSNPVLVAVNKADLLPADFSQDRVRIWVKQELEKVGMTDVSTRDIHLISCKTGNNVRPLLRSMKQMARQRRRDLYVIGAANVGKSTFINRLIE 624
BLAST of mRNA_F-serratus_M_contig6.16614.1 vs. uniprot
Match: A0A7S3YAI7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAI7_HETAK) HSP 1 Score: 175 bits (444), Expect = 4.570e-50 Identity = 82/163 (50.31%), Postives = 119/163 (73.01%), Query Frame = 1
Query: 703 VVCQRCHRLRYYGSLEESLRPGFSDSDLLTPQRFVELLGTLKKQRCLIVYLVDLFDFHGTFLYNLPRITGNNPVLVAGNKVDLLPKDLKKERVTKWVRDKCRESGLPAMEMRDVHLISSKLGVGIAPLMRKAREQAL-RDKRDIYVLGAANVGKSTFINYIIQ 1188
V+CQRC++L +YG ++ LRPG+SD+ LTP+RF +LL ++ +RC++VYL DLFDF G+ L+NL RI G+NPV++A NKVDLLPKDL ++RV W+ ++ + G + + + L+S K G G+ ++R R A R DIYV+G+ANVGKSTFINY++Q
Sbjct: 1 VICQRCYKLMHYGQVDNELRPGWSDNAFLTPKRFQDLLSPIRTERCVVVYLTDLFDFSGSLLWNLNRIVGDNPVMLAVNKVDLLPKDLSRDRVITWIHNETKRLGF-GIPRKHISLVSCKTGAGVDRVVRDMRYFARERGNADIYVIGSANVGKSTFINYLLQ 162
BLAST of mRNA_F-serratus_M_contig6.16614.1 vs. uniprot
Match: A0A7S2HU96_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HU96_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.030e-44 Identity = 84/159 (52.83%), Postives = 111/159 (69.81%), Query Frame = 1
Query: 703 VVCQRCHRLRYYGSLEESLRPGFSDSDLLTPQRFVELLGTLKKQRCLIVYLVDLFDFHGTFLYNLPRITGNNPVLVAGNKVDLLPKDLKKERVTKWVRDKCRE-SGLPAMEMRDVHLISSKLGVGIAPLMRKAREQALRDKRDIYVLGAANVGKSTFIN 1176
V+CQRCHRLR YG++ + LRPG+S S+ L P F EL+G LK +RC++V ++D+FDFHG+ L L + G NP+ VA NKVDLLP D RV WV ++CR + L + +VHL+S+K G GI LM R+ A R K DIYV+GAANVGKS+F+N
Sbjct: 135 VICQRCHRLRNYGNVADDLRPGWSKSEALMPSHFEELIGALKGKRCVLVTMIDVFDFHGSVLPRLASLAGKNPLFVAVNKVDLLPSDYSPTRVRDWVVEECRYWASLEQIRPNNVHLVSAKTGSGIGKLMDAVRDLAKRRKCDIYVVGAANVGKSSFVN 293
BLAST of mRNA_F-serratus_M_contig6.16614.1 vs. uniprot
Match: A0A7S1XVB5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVB5_9STRA) HSP 1 Score: 167 bits (423), Expect = 3.940e-44 Identity = 78/164 (47.56%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 697 KLVVCQRCHRLRYYGSLEESLRPGFSDSDLLTPQRFVELLGTLKKQRCLIVYLVDLFDFHGTFLYNLPRITGNNPVLVAGNKVDLLPKDLKKERVTKWVRDKCRESGLPAMEMRDVHLISSKLGVGIAPLMRKAREQALRDKRDIYVLGAANVGKSTFINYIIQ 1188
K VC RCH+LR+YG ++ LR G+S + LTP+ F + + L+ C+++YL D+FDFHG+ L N+ R+ G+N VLVA NK DLLP+D+ +RV +W+ + R GL + +VHLIS G G++ L++ RE A + K D+YV+GAANVGKSTFIN +I+
Sbjct: 222 KETVCARCHKLRHYGQVDSELRAGWSSLETLTPKAFEDTIKVLRDVDCIVLYLTDIFDFHGSVLTNIRRLVGSNEVLVAANKADLLPRDVHTDRVRQWITREMRALGLGDVRNSNVHLISCFSGYGVSSLLKSVRELAAQRKCDVYVVGAANVGKSTFINRLIE 385
BLAST of mRNA_F-serratus_M_contig6.16614.1 vs. uniprot
Match: A0A7R9U5B0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5B0_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.860e-43 Identity = 80/164 (48.78%), Postives = 112/164 (68.29%), Query Frame = 1
Query: 697 KLVVCQRCHRLRYYGSLEESLRPGFSDSDLLTPQRFVELLGTLKKQRCLIVYLVDLFDFHGTFLYNLPRITGNNPVLVAGNKVDLLPKDLKKERVTKWVRDKCRESGLPAMEMRDVHLISSKLGVGIAPLMRKAREQALRDKRDIYVLGAANVGKSTFINYIIQ 1188
K VVC RC++LRYYG ++ LR G+S + LTP+ F + + L+ CL+VY+ D+FDFHG+ L N+ R+ G N V+VA NK DLLPKD+K +RV +W+ + R GL + +VHLIS G G+ L+R RE+A + D+YV+GAANVGKSTFIN ++
Sbjct: 211 KEVVCARCYKLRYYGKVDSELRAGWSTVETLTPKAFEDTISVLRDVDCLVVYVTDIFDFHGSVLTNIRRLVGANEVIVAANKADLLPKDMKPDRVRQWITKEMRALGLGDVRNSNVHLISCFTGYGVKSLLRAVRERAAVKQCDVYVVGAANVGKSTFINKLVD 374
BLAST of mRNA_F-serratus_M_contig6.16614.1 vs. uniprot
Match: A0A7S2E702_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E702_TRICV) HSP 1 Score: 154 bits (390), Expect = 2.220e-39 Identity = 78/169 (46.15%), Postives = 110/169 (65.09%), Query Frame = 1
Query: 694 DKLVVCQRCHRLRYYGSLEESLRPGFSDSDLLTPQRFVELLGTLKKQRCLIVYLVDLFDFHGTFLYNLPRITGNNPVLVAGNKVDLLPKDLKKERVTKWVRDKCRESGLPAMEMRD--VHLISSKLGVGIAPLMRKAREQALRDKRDIYVLGAANVGKSTFINYIIQDR 1194
DK V+CQRCH+L+ YG +EE LRPG+++ L + F LL ++++ C++V LVDLFDF G+ L L I G+NPV++A NK DLLP + +ER WVR + G+ ++ R V L+S K G G+A L+ KAR A + D+YV+GAAN GKST IN+I+
Sbjct: 14 DKTVICQRCHKLQNYGEVEERLRPGWTEEPQLAQETFRNLLRPIREKTCVVVALVDLFDFSGSVLPELDAIAGDNPVILAANKADLLPSKMGQERAKGWVRRELEYLGVRSINNRGGAVKLVSCKTGYGLAGLLGKARTLAEERECDVYVVGAANAGKSTLINHILDKN 182
BLAST of mRNA_F-serratus_M_contig6.16614.1 vs. uniprot
Match: A0A0G4IE41_9ALVE (G domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IE41_9ALVE) HSP 1 Score: 160 bits (404), Expect = 3.960e-39 Identity = 80/163 (49.08%), Postives = 111/163 (68.10%), Query Frame = 1
Query: 703 VVCQRCHRLRYYGSLEESLRPGFSDSDLLTPQRFVELLGTLKKQRCLIVYLVDLFDFHGTFLYNLPRITGNNPVLVAGNKVDLLPKDLKKERVTKWVRDKC-RESGLPAMEMRDVHLISSKLGVGIAPLMRKAREQALRDKRDIYVLGAANVGKSTFINYIIQ 1188
++C RCH + G +EE LRPG+SDSDLL+P RFV+LL L+ +RCL+V + DL DF + NL + G NPVLVA NK DLLP D+ K+RV +WV D+ R+SGL + RD+ L+S+K G IA L+ E+A RD+Y++G AN GKS+ +NY++
Sbjct: 2960 LICARCHSVTTSGQVEEILRPGWSDSDLLSPGRFVQLLSGLRNKRCLVVLVTDLADFDA--IPNLSDVVGKNPVLVAANKADLLPSDVSKKRVMQWVHDRLKRDSGLAQLRPRDIFLVSAKTGHNIALLLSVIGEEARLRGRDVYLVGTANAGKSSVLNYLLS 3120 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6.16614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6.16614.1 >prot_F-serratus_M_contig6.16614.1 ID=prot_F-serratus_M_contig6.16614.1|Name=mRNA_F-serratus_M_contig6.16614.1|organism=Fucus serratus male|type=polypeptide|length=399bp LRIGDGDGDALEEEEEGLDADEVGDEDGMEARLRDARASNDRLSEALLHSback to top mRNA from alignment at F-serratus_M_contig6:901334..911301+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6.16614.1 ID=mRNA_F-serratus_M_contig6.16614.1|Name=mRNA_F-serratus_M_contig6.16614.1|organism=Fucus serratus male|type=mRNA|length=9968bp|location=Sequence derived from alignment at F-serratus_M_contig6:901334..911301+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6:901334..911301+ >mRNA_F-serratus_M_contig6.16614.1 ID=mRNA_F-serratus_M_contig6.16614.1|Name=mRNA_F-serratus_M_contig6.16614.1|organism=Fucus serratus male|type=CDS|length=2394bp|location=Sequence derived from alignment at F-serratus_M_contig6:901334..911301+ (Fucus serratus male)back to top |