mRNA_F-serratus_M_contig1531.3666.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1531.3666.1 vs. uniprot
Match: D7FP69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP69_ECTSI) HSP 1 Score: 917 bits (2371), Expect = 0.000e+0 Identity = 593/983 (60.33%), Postives = 679/983 (69.07%), Query Frame = 2
Query: 56 PSAILNSLSHEEKRSLSGIFAVALPADDLVNGVWSVTLLEDILTFLDLGEELAEGLYPITERARLDLSPPADPRADWEERVEPFRSCLPPQGETRCIVLRDLMVLVALRCGYDARTRVTFRRVCEAMRVPWHPRVSEVESTLARKVYEQVTRERERELRKDRWRNMKIGAAMLGGGALLAVTXXXXXXXXXXXXXXXXXXXXXXXXXXLSGFATTTWMATVFGATGAGLVGYKMDLRTQGVKEFEFESETSVGEEMSVTICVPGVLRGKADLQRAWGVEPRGKDVTARERLRRFYFVYNRDKVGDVEDILKAYDGRESKLCKTLVERYGTDPRDPLTREALARSEGRSLEGVDHEDVKRDAEAIGHLMEEVLKQEKLEKEKIKI---------KKKPVVNF---FSGTNPSPHVGDNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDETGPL-------------------------------------APPVATL----------LEESRPENEALLRDWDRDSEGQIGNASQGVGSRGARAQGAGGTTRGADVGQGAARGAKALADDVDAIKDMNSAAAAREGGGVDGVEGV---EGEDVTKDGDDLGKHRVWFWQDKLPHNDQYLLRWESEWLLKLGKSVENMMKSIRSSAIQETLKYTTLAAIMTSIAWPLTLISLADMIDGDWTIGKERADIAGKILADALLNREQGCRPVTLIGTSLGARLIFSCLEEIARRHELWEEQMLELVGDD--------------SAGRGLPN----RVKNAVKKSERGRS--GTRRSRLSAGIERCSRSFSRSRSGARKIGEAKCAAGVIENVCLLGAPVGASPARWERVSRLVHGRVINGYSKSDLILGLVFRAKSLSLSVAGIQKVPAQGVENLDLSSVIGSNHFNYNRKMPEILSLMALDDCSKYVPTGNGSGSIALPAVAVASSAKAGDVDTDQIVYGSTIVP 2758
PS +L LS EK+SL+G+ AV+LPADDL +G+WS+TLLEDIL L L ++LAEG YPITER+R L PAD +A WEERVEPFR CLPP GE R VLRDLMV+VALRCGYDARTRVTFRRVC+AM+V WHPRVSEVESTLARKVYE+V R+RERELR DRWR KIGAAM+GGG LLAVT XXXXXXXXXXXXXXXXXXXXXX SGFATT WMAT+FGA GAGLVGYKMD RT+GVKEFEFESETSVGEEM V+ICVPGVL+ KADLQR WGVEPRG DV+A+ERLRRFY+V+NR KVGDVEDIL AYDG+ESKLCK L +RYG DPRDP TREALAR+EGR +EGV ED+ RDA AI LME VL +EK E EK K K++P N S TNP GDN XXXXXXXXXXXXXXXXXXXXXX GP PP T L+ + LLRDWDR +GQ+ GVGS + A+VG AA +K + ++ D I+ A GG +G + D K+ DL KHRVWFWQDKLPH DQY+LRWES+WL+ LGKSVE ++KS+ SA+QETLKYTTLAAIMTS+AWPL LISL+ MID DWTIG+ERAD+AGKILADALLNREQGCRPVTL+GTSLGARLIF+CLEEIARRHELWEEQM+E +AGRG P R++NAV RG+S G +SAG K EA+CAAGVIENVCLLGAPVGA+ ARWERV+R+ HGRVINGYSKSD+I+GLVFRAKSLSLSV+GIQKV A GVEN+DLSSV+GSNHFNYNRKMPEIL L+ LD+ S Y+ G+ I+ PAVA + +V +VYG+T+VP
Sbjct: 6 PSELLKGLSLSEKKSLAGLVAVSLPADDLADGLWSLTLLEDILQLLGLDKDLAEGFYPITERSRRGLPRPADSKAAWEERVEPFRVCLPPLGEPRSAVLRDLMVIVALRCGYDARTRVTFRRVCDAMQVRWHPRVSEVESTLARKVYERVARDRERELRTDRWRGFKIGAAMIGGGTLLAVTGGLAXXXXXXXXXXXXXXXXXXXXXXXSGFATTAWMATLFGAGGAGLVGYKMDRRTKGVKEFEFESETSVGEEMCVSICVPGVLKDKADLQRGWGVEPRGSDVSAKERLRRFYYVHNRAKVGDVEDILVAYDGKESKLCKALHDRYGADPRDPPTREALARAEGRRVEGVSQEDLARDAAAIEQLMEAVLTKEKQETEKAKARAVEEAKLAKEEPARNAGTTLSSTNP----GDNRRPSPTARNASGRKPAXXXXXXXXXXXXXXXXXXXXXXSSTPAGRGPSPEVPSPSDGNPFTVPGAAGTVXXXXXXXXXXXXXXAGVPPHPTAEPRDSGGNSGLDTGSGGGDGLLRDWDRGPDGQVEALRGGVGSM----------SLAAEVGA-AAAASKEVEEESDEIQIFVEADGI--GGAAEGAXXXXXXDKGDPEKEDKDLLKHRVWFWQDKLPHTDQYVLRWESDWLVTLGKSVETIIKSLSQSAMQETLKYTTLAAIMTSLAWPLALISLSSMIDADWTIGRERADVAGKILADALLNREQGCRPVTLVGTSLGARLIFACLEEIARRHELWEEQMMEXXXXXQDHWGCAAAGSSATTAGRGPPRSKMTRLRNAVTPDNRGKSKAGLNGVGVSAGSSXXXXXXXXXXXXXXK-NEARCAAGVIENVCLLGAPVGATAARWERVARMAHGRVINGYSKSDVIIGLVFRAKSLSLSVSGIQKVSAVGVENVDLSSVVGSNHFNYNRKMPEILELLDLDNTSTYIGRGDSPEEIS-PAVAAGQRYGSDNV----VVYGTTVVP 965
BLAST of mRNA_F-serratus_M_contig1531.3666.1 vs. uniprot
Match: A0A835Z4D9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D9_9STRA) HSP 1 Score: 251 bits (642), Expect = 2.230e-71 Identity = 141/297 (47.47%), Postives = 188/297 (63.30%), Query Frame = 2
Query: 1769 LPHNDQYLLRWESEWLLKLGKSVENMMKSIRSSAIQETLKYTTLAAIMTSIAWPLTLISLADMIDGDWTIGKERADIAGKILADALLNREQGCRPVTLIGTSLGARLIFSCLEEIARRHELWEEQMLELVGDDSAGRGLPNRVKNAVKKSERGRSGTRRSRLSAGIERCSRSFSRSRSGARKIGEAKCAAGVIENVCLLGAPVGASPARWERVSRLVHGRVINGYSKSDLILGLVFRAKSLSLSVAGIQKVPAQGVENLDLSSVIGSNHFNYNRKMPEILSLMALDDCSKYVPTGNG 2659
+PH++Q+LL WES+ L++LG SV ++ +A+Q+ L++T L + +++ P+TL++LAD ID DW IG ERAD AGK+LA LL+REQG RPVTLIGTS+GARL+FSCLEE+ RRHELWE + R P R RGR G +G AAG+IEN LLGAPVG SP RWERV+R+VHGR+INGY K D ILGL++R + LS+SVAG+Q + ++ VEN DLS + S H Y ++PEI++L+ LDDC +Y G
Sbjct: 1 MPHSEQHLLVWESKLLVELGDSVVKALQDAGLTALQQGLQFTALGVLAAAVSLPITLVALADYIDSDWAIGCERADKAGKVLAGILLSREQGTRPVTLIGTSIGARLMFSCLEEMVRRHELWEASGKQ--------RASPPR---------RGRKGG------------------------GMGGPCNAAGIIENAVLLGAPVGVSPKRWERVARVVHGRLINGYFKKDGILGLIYRIRRLSVSVAGLQPIASRAVENADLSPAL-SQHMQYCSRVPEIMALLQLDDCRRYARGARG 255
BLAST of mRNA_F-serratus_M_contig1531.3666.1 vs. uniprot
Match: W7TZH7_9STRA (Uncharacterized protein n=5 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZH7_9STRA) HSP 1 Score: 246 bits (628), Expect = 2.320e-64 Identity = 254/929 (27.34%), Postives = 402/929 (43.27%), Query Frame = 2
Query: 68 LNSLSHEEKRSLSGIFAVALPADDLVNGVWSVTLLEDILTFLDLGEELAEGLYPI----------------------------------------------TERARLDLSPPADPRADWEERVEPFRSCLPPQGETRCIVLRDLMVLVALRCGYDARTR-VTFRRVCEAMRVPWHPRVSEVESTLARKVYEQVTRERERELRKDRWRNMKIGAAMLGGGALLAVTXXXXXXXXXXXXXXXXXXXXXXXXXXLSGFATTTWMATVFGATGAGLVGYKMDLRTQGVKEFEF--------ESETSVGEEMSVTICVPG-VLRGKADLQRAWGVEPRGKDVTARERLRRFYFVYNRDKVGDVEDILKAYDGRESKLCKTLVERYGTDPRDPLTREALARSEGRSLEGVDHEDVKRDAEAIGHLMEEVLKQEKLEKEKIKIKKKPVVNFFSGTNPSPHVGDNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDETGPLAPPVATLLEESRPENEALLRDWD--RDSEGQIGNASQGVG---------------SRGARAQGAGGTTRGADVGQGAARGAKALADDVDAIKDMNSAAAAREGGGVDGVEGVEGEDVTKDGD--DLGKHRVWFWQDKLPHNDQYLLRWESEWLLKLGKSVENMMKSIRSSAIQETLKYTTLAAIMTSIAWPLTLISLADMIDGDWTIGKERADIAGKILADALLNREQGCRPVTLIGTSLGARLIFSCLEEIARRHELWEEQMLELVGDDSAGRGLPNRVKNAVKKSERGRSGTRRSRLSAGIERCSRSFSRSRSGARKIGEAKCAAGVIENVCLLGAPVGASPARWERVSRLVHGRVINGYSKSDLILGLVFRAKSLSLSVAGIQKVPAQGVENLDLSSVIGSNHFNYNRKMPEILSLMALDD 2629
L LS EE+ L G+ A+++P+ D G +++ LL + L L E LYP+ TE L PPAD +A S + + R ++LRDLM+ +A R YDARTR + R +A + W ++ VE+ A +YE +E+E R KI AA +GGGALLA+T ++G +T +AT+FGA+GAGLVGYKM RT + +FEF + E+ +G M++ IC+ G ++ +++ +GVEPR DV AR RL FY +N + + + GRES+L + +Y P D ++ S+ +L + + + EK E ++ I + +GT+ H D+ G ++ +S ENE L + + R Q + S+G+ SR R R +++ +R + V+ KD ++ + G + D D + DL + +W D P+ + + L WES+ L K+G SV +++ S A E L +T A++++++AWP+TL+ ADMID WTI E+AD AG++LA L+ +E+G RP+ LIG S+GARLI +CL E+AR H WE+ G + G+ ++K + + LS SR K +G+I+ V L+GAPV S + W + ++V GR++N YSK D +L L++R L + AGI V G+EN+D+S ++ H +Y K+ +IL L+ L+D
Sbjct: 3 LAMLSTEERVCLLGLLALSMPSQDQAFGRYNLRLLRTVSNMLGLQENHCSALYPLLHSEGNDVKIRHTQLLAFLKPFEGAESLAFDEKVQFAQASCKNHTYTEELGLKQEPPAD-QAYHISGKRFSGSAVYHERRRRYLILRDLMISLACRSLYDARTRRIMMRLASDAFEISWR-NIACVEAFTASYLYEIWEARQEKEKINKGLRYAKITAAAVGGGALLALTGGLAAPAIGIGLSAMSATGAV-----VAGLTSTASVATLFGASGAGLVGYKMRRRTAALDQFEFRHVEPSGDKKESDLGR-MAICICISGWLVEDESEYDTPFGVEPRNSDVAARLRL--FYSRHNPQNIKYATLLADEFQGRESELEHECLRKYNASPFDDRNKKKRGNSKSPRK----------------YLYDSLPEAEKEEIFQL-IASYDEPSVHAGTDEHTHESVRISRRARLSRGDSASCKSSSKCRSDDSSYSKSTTTLINMMHECDDNGD----EVSVESQSNTENEDYLLNAEIHRIVGLQYSSTSEGLSPSKSIDRAEIDPMMLSRIDR------EPRCSNLPFCLSRSRQ-----VENRKDQGEKCEVQDESEL----GAKVFDALLDSECRDLSQDFSPWWLDMFPYLETFTLHWESKALSKMGSSVMDIVASFGQQAALEVLTFTAAASLVSALAWPITLLQAADMIDNSWTIACEKADRAGQLLAQILVRKERGHRPIVLIGFSMGARLIMACLSELARIHNSWED------GQNDKGQKPEVQIKASTSAVQ----------LSPTASTPSR---------EKTETGSPVSGLIDTVVLMGAPVSCSESSWVKARKVVAGRLVNCYSKKDWVLSLMYRYHKLVTNAAGIAPVHVCGIENVDVSELV-PGHQHYATKIKDILLLVGLED 859
BLAST of mRNA_F-serratus_M_contig1531.3666.1 vs. uniprot
Match: A0A7S2RYC4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYC4_9STRA) HSP 1 Score: 181 bits (459), Expect = 3.170e-45 Identity = 118/323 (36.53%), Postives = 170/323 (52.63%), Query Frame = 2
Query: 1745 RVWFWQDKLPHNDQYLLRWESEWLLKLGKSVENMMKSIRSSAIQETLKYTTLAAIMTSIAWPLTLISLADMIDGDWTIGKERADIAGKILADALLNREQGCRPVTLIGTSLGARLIFSCLEEIARRHELWEEQMLE---LVGDDSAGRGLPNRVKNAVKKSERGRSGTRRSRLSAGIERCSRSFSRSRSGARKIGEAKCAAGVIENVCLLGAPVGASPARWERVSRLVHGRVINGYSKSDLILGLVFRAKSLSLSVAGIQKV--------PAQGV-----------------ENLDLSSVIGSNHFNYNRKMPEILSLMALDD 2629
+VWFW + +QY LRWES L LG SV +++S ++A +E YT AA++ ++AWP +I D ID WT+ ERAD+AG++LA+ LL R G RPVTLIG S+GARLIFSCL + ++HE W ++ E + + RG R S F S AG++E+V L+G PV ++W V+++V GR++N YS +D LG+++R + S +VAGI+ V QGV E+LD+SSVI H +Y +K+P+IL L+ALDD
Sbjct: 185 QVWFWSQRFHGTEQYYLRWESATLTTLGSSVMELIQSASTAAAREVATYTVFAAVVAAVAWPYYIIKAFDSIDPIWTLACERADLAGQLLAETLLERAHGSRPVTLIGYSMGARLIFSCLRTLRQKHETWLAEVQEETAALEPHGSNRGADER---------------------------SAMFKNSP-----------VAGLVEDVVLMGTPVPCG-SQWTEVAKIVGGRLVNCYSATDWTLGILYRYQRWSTTVAGIRPVNPNAVDAEKLQGVDVDVDLTVNDEGAYWNLEDLDVSSVI-KYHSDYPKKIPQILDLVALDD 467
BLAST of mRNA_F-serratus_M_contig1531.3666.1 vs. uniprot
Match: D0NN16_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NN16_PHYIT) HSP 1 Score: 177 bits (448), Expect = 1.320e-43 Identity = 105/295 (35.59%), Postives = 150/295 (50.85%), Query Frame = 2
Query: 1745 RVWFWQDKLPHNDQYLLRWESEWLLKLGKSVENMM-KSIRSSAIQETLKYTTLAAIMTSIAWPLTLISLADMIDGDWTIGKERADIAGKILADALLNREQGCRPVTLIGTSLGARLIFSCLEEIARRHELWEEQMLELVGDDSAGRGLPNRVKNAVKKSERGRSGTRRSRLSAGIERCSRSFSRSRSGARKIGEAKCAAGVIENVCLLGAPVGASPARWERVSRLVHGRVINGYSKSDLILGLVFRAKSLSLSVAGIQKVPAQGVENLDLSSVIGSNHFNYNRKMPEILSLMALD 2626
R W W+D+ P DQY L WE L + GKS+ + + + A E +KYT LAA+ ++A P ++ LAD+ID WT+ AD +GK+LADAL REQG RPVTL+G +GARLIFSCL+E+A+ + D+S G ++EN LLG+PV + W R+V GR+INGYS+ D +LG+++R + +L+ AGI + GVEN+DLS +IG H Y K+ I+ L+ L+
Sbjct: 270 RAWRWKDRFPQGDQYCLIWEEAGLRRFGKSMRTFAAEQVSNYATTEIVKYTALAALFAAVAIPRVILRLADIIDNAWTVTMNAADTSGKLLADALRKREQGLRPVTLVGYGMGARLIFSCLKELAKSETI----------DESCG-------------------------------------------------------IVENAVLLGSPVPMARDDWANARRVVSGRLINGYSEKDWMLGVMYRYQGWALNSAGIAPIDIAGVENVDLSEIIGG-HLEYKSKIGAIVDLLQLE 498
BLAST of mRNA_F-serratus_M_contig1531.3666.1 vs. uniprot
Match: A0A3R7IQF8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IQF8_9STRA) HSP 1 Score: 175 bits (444), Expect = 9.600e-43 Identity = 107/295 (36.27%), Postives = 150/295 (50.85%), Query Frame = 2
Query: 1745 RVWFWQDKLPHNDQYLLRWESEWLLKLGKSVENMM-KSIRSSAIQETLKYTTLAAIMTSIAWPLTLISLADMIDGDWTIGKERADIAGKILADALLNREQGCRPVTLIGTSLGARLIFSCLEEIARRHELWEEQMLELVGDDSAGRGLPNRVKNAVKKSERGRSGTRRSRLSAGIERCSRSFSRSRSGARKIGEAKCAAGVIENVCLLGAPVGASPARWERVSRLVHGRVINGYSKSDLILGLVFRAKSLSLSVAGIQKVPAQGVENLDLSSVIGSNHFNYNRKMPEILSLMALD 2626
R W W+D+ P DQY L WE L + GKS+ + + + + A E +KYT LAA+ ++A P ++ L D+ID WTI AD +GK+LA AL REQG RPVTL+G +GARLIFSCL+E+A E Q D+S G ++EN LLG+PV + A W R+V GR+INGYS+ D +LG+++R + +L+ AGI + GVEN+DLS +IG H Y K+ I+ L+ L+
Sbjct: 313 RAWRWKDRFPQGDQYCLMWEEATLRRFGKSMRSFAAEQVSNYATTELVKYTALAALFAAVAIPRVILRLTDIIDNAWTITMNNADTSGKLLAGALRQREQGLRPVTLVGYGMGARLIFSCLKELANS----ESQ------DESCG-------------------------------------------------------IVENAVLLGSPVPMARADWINARRMVSGRLINGYSEKDWMLGVMYRYQGWALNSAGIAPIDIAGVENVDLSEIIGG-HLEYKSKIGAIMDLLQLE 541
BLAST of mRNA_F-serratus_M_contig1531.3666.1 vs. uniprot
Match: A0A3R8CUC3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R8CUC3_9STRA) HSP 1 Score: 177 bits (450), Expect = 9.940e-43 Identity = 108/295 (36.61%), Postives = 152/295 (51.53%), Query Frame = 2
Query: 1745 RVWFWQDKLPHNDQYLLRWESEWLLKLGKSVENMM-KSIRSSAIQETLKYTTLAAIMTSIAWPLTLISLADMIDGDWTIGKERADIAGKILADALLNREQGCRPVTLIGTSLGARLIFSCLEEIARRHELWEEQMLELVGDDSAGRGLPNRVKNAVKKSERGRSGTRRSRLSAGIERCSRSFSRSRSGARKIGEAKCAAGVIENVCLLGAPVGASPARWERVSRLVHGRVINGYSKSDLILGLVFRAKSLSLSVAGIQKVPAQGVENLDLSSVIGSNHFNYNRKMPEILSLMALD 2626
R W W+D+ P DQY L WE L + GKS+ + + S A E +KYT LAA+ +IA P T++ LAD+ID WT+ ADI+GK+LADAL REQG RPVTL+G +GARLIFSCL+E+++ +L+ E C G++EN LLG+PV W R+V GR+INGYS++D +LG+++R +L+ AG+ + GVEN++LS +IG H Y K+ I+ L+ LD
Sbjct: 434 RAWRWKDRFPQGDQYCLIWEEAGLRRFGKSMRTFAAEQVSSYATTEIVKYTALAALFAAIAIPRTILRLADIIDNAWTVTMNAADISGKLLADALRKREQGLRPVTLVGYGMGARLIFSCLKELSKS---------DLIN-----------------------------------ESC---------------------GIVENAVLLGSPVPMERDDWTNARRVVSGRLINGYSENDWMLGVMYRYHGWTLNSAGVAPLDIVGVENVNLSEIIGG-HLEYKSKIGAIMDLLQLD 662
BLAST of mRNA_F-serratus_M_contig1531.3666.1 vs. uniprot
Match: A0A7S2WFL1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFL1_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.100e-42 Identity = 118/323 (36.53%), Postives = 170/323 (52.63%), Query Frame = 2
Query: 1745 RVWFWQDKLPHNDQYLLRWESEWLLKLGKSVENMMKSIRSSAIQETLKYTTLAAIMTSIAWPLTLISLADMIDGDWTIGKERADIAGKILADALLNREQGCRPVTLIGTSLGARLIFSCLEEIARRHELWEEQMLE---LVGDDSAGRGLPNRVKNAVKKSERGRSGTRRSRLSAGIERCSRSFSRSRSGARKIGEAKCAAGVIENVCLLGAPVGASPARWERVSRLVHGRVINGYSKSDLILGLVFRAKSLSLSVAGIQKV--------PAQGV-----------------ENLDLSSVIGSNHFNYNRKMPEILSLMALDD 2629
+VWFW + +QY LRWES L LG SV +++S ++A +E YT AA++ ++AWP +I D ID WT+ ERAD+AG++LA+ LL R G RPVTLIG S+GARLIFSCL + ++HE W ++ E + + RG R S F S AG++E+V L+G PV ++W V+++V GR++N YS +D LG+++R + S +VAGI+ V QGV E+LD+SSVI H +Y +K+P+IL L+ALDD
Sbjct: 758 QVWFWSQRFHGTEQYYLRWESATLTTLGSSVMELIQSASTAAAREVATYTVFAAVVAAVAWPYYIIKAFDSIDPIWTLACERADLAGQLLAETLLERAHGSRPVTLIGYSMGARLIFSCLRTLRQKHETWLAEVQEETAALEPHGSNRGADER---------------------------SAMFKNSP-----------VAGLVEDVVLMGTPVPCG-SQWTEVAKIVGGRLVNCYSATDWTLGILYRYQRWSTTVAGIRPVNPNAVDAEKLQGVDVDVDLTVNDEGAYWNLEDLDVSSVI-KYHSDYPKKIPQILDLVALDD 1040
BLAST of mRNA_F-serratus_M_contig1531.3666.1 vs. uniprot
Match: A0A484DXA9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXA9_BRELC) HSP 1 Score: 177 bits (449), Expect = 1.600e-42 Identity = 107/295 (36.27%), Postives = 151/295 (51.19%), Query Frame = 2
Query: 1745 RVWFWQDKLPHNDQYLLRWESEWLLKLGKSVENMM-KSIRSSAIQETLKYTTLAAIMTSIAWPLTLISLADMIDGDWTIGKERADIAGKILADALLNREQGCRPVTLIGTSLGARLIFSCLEEIARRHELWEEQMLELVGDDSAGRGLPNRVKNAVKKSERGRSGTRRSRLSAGIERCSRSFSRSRSGARKIGEAKCAAGVIENVCLLGAPVGASPARWERVSRLVHGRVINGYSKSDLILGLVFRAKSLSLSVAGIQKVPAQGVENLDLSSVIGSNHFNYNRKMPEILSLMALD 2626
R W W+D+ P DQY L WE L + GKS+ + + S A E ++YT LAA+ T++A P ++ LAD+ID WTI AD +G++LADAL REQG RPVTL+G +GARLIFSCL+E+A+ EL+ + C G++EN LLG+PV + W R+V GR+INGYS+ D +LG+++R + L AGI + GVEN+DLS++IG H Y K+ I+ L+ L+
Sbjct: 449 RAWRWKDRFPQGDQYCLVWEEAGLRRFGKSMRTFAAEQVSSYATTEFVRYTALAALFTAVAIPRVILRLADIIDNVWTITMNAADTSGRMLADALRKREQGLRPVTLVGYGMGARLIFSCLKELAKS---------ELI------------------------------------------------------DVSC--GIVENAILLGSPVSMAREDWANARRVVSGRLINGYSEKDWMLGIMYRYQGWELHSAGIAPIDIAGVENVDLSAIIGG-HLEYKSKIGAIMDLLQLE 677
BLAST of mRNA_F-serratus_M_contig1531.3666.1 vs. uniprot
Match: A0A6A3L8H1_9STRA (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L8H1_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.160e-42 Identity = 108/295 (36.61%), Postives = 147/295 (49.83%), Query Frame = 2
Query: 1745 RVWFWQDKLPHNDQYLLRWESEWLLKLGKSVENMM-KSIRSSAIQETLKYTTLAAIMTSIAWPLTLISLADMIDGDWTIGKERADIAGKILADALLNREQGCRPVTLIGTSLGARLIFSCLEEIARRHELWEEQMLELVGDDSAGRGLPNRVKNAVKKSERGRSGTRRSRLSAGIERCSRSFSRSRSGARKIGEAKCAAGVIENVCLLGAPVGASPARWERVSRLVHGRVINGYSKSDLILGLVFRAKSLSLSVAGIQKVPAQGVENLDLSSVIGSNHFNYNRKMPEILSLMALD 2626
R W W+D+ P DQY L WE L + GKS+ + + + A E +KYT LAA+ +IA P + LAD+ID WT+ AD +GK+LADAL REQG RPVTLIG +GARLIFSCL+E+A+ L E A G++EN LLG+PV + W R+V GR+INGYS D +LG+++R + +L+ AGI + GVEN+DLS VIG H Y K+ I+ ++ L+
Sbjct: 475 RAWRWKDRFPQGDQYCLVWEEAGLRRFGKSMRTFAAEQVSTYATAELVKYTALAALFAAIAIPRVIFRLADIIDNAWTVTMNAADASGKLLADALRQREQGLRPVTLIGYGMGARLIFSCLKELAKSDSLDE-----------------------------------------------------------------ACGIVENAVLLGSPVPLARDDWTNARRVVSGRLINGYSDKDWMLGIMYRYQGWALNSAGIAPIDIAGVENVDLSEVIGG-HLEYKSKIGVIMDMLQLE 703 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1531.3666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1531.3666.1 >prot_F-serratus_M_contig1531.3666.1 ID=prot_F-serratus_M_contig1531.3666.1|Name=mRNA_F-serratus_M_contig1531.3666.1|organism=Fucus serratus male|type=polypeptide|length=910bp MPSPSAILNSLSHEEKRSLSGIFAVALPADDLVNGVWSVTLLEDILTFLDback to top mRNA from alignment at F-serratus_M_contig1531:74671..106248+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1531.3666.1 ID=mRNA_F-serratus_M_contig1531.3666.1|Name=mRNA_F-serratus_M_contig1531.3666.1|organism=Fucus serratus male|type=mRNA|length=31578bp|location=Sequence derived from alignment at F-serratus_M_contig1531:74671..106248+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1531:74671..106248+ >mRNA_F-serratus_M_contig1531.3666.1 ID=mRNA_F-serratus_M_contig1531.3666.1|Name=mRNA_F-serratus_M_contig1531.3666.1|organism=Fucus serratus male|type=CDS|length=5460bp|location=Sequence derived from alignment at F-serratus_M_contig1531:74671..106248+ (Fucus serratus male)back to top |