mRNA_F-serratus_M_contig1531.3665.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1531.3665.1 vs. uniprot
Match: D7FP71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP71_ECTSI) HSP 1 Score: 485 bits (1249), Expect = 3.550e-161 Identity = 254/379 (67.02%), Postives = 288/379 (75.99%), Query Frame = 3
Query: 624 IFP-CSSQPLPAEVLQRLMLWLRASDITALSVXXXXXXXXXXXXXXXXAVASFVKNRYGRANPALREDDTAWKRDLETLRHAELTHLSALVVNSKPRHGKGYFLSKAWAGNLRRYVEAQARRRRSPLSSSPNSAG----------KEKRRRGRERAESNLMPPWPDANADITCHHGGLAHSPQGTRCKRQVVDKRVWKELVAFFPGAKAFRVENPECLECLGKSLGKSTSEREAEEAVRREREREISLPVLKALYGRKTGVPSASLVTPPSANGNAANSP----PKCPLLPGIYHLLPRYWLNSWRAYVRDPRAPSPRTLDTALLLCEGHGLLITPPHVEEFLAGSRRYLLGGLDPDRSGCVCEVLTPEEWDALTLLHP 1715
IFP +PLPA VLQ L WL ++D++AL VAS VK+RYGRANP LRE+DT W+RDLETLRHAEL+H+++LV + R GKGY+LSK+WAGNLRRYVEAQARRRRSP +S ++AG KEKR RGRERAESNLMPPW D NADI C H GLA S QG R KRQVVDKRVW+ELV FFP A FR E+ EC EC G +ER+AEEAV+R+RE+EI+LPVL+ALYGRKTGVPSA+L TP G++A P P CPLLPGIYHLLPRYWLN+WRAYVRDPRAPSPRTLDTALLLCEGHGLL+ PPHVEEFL+G RR LLGGLDPDRSGCVCEV+TPEEWDALTL P
Sbjct: 64 IFPRAGPRPLPAVVLQSLFGWLLSTDLSALRASSVAASSPETAAVLETTVASLVKHRYGRANPTLREEDTGWRRDLETLRHAELSHVASLVRGPQ-RPGKGYYLSKSWAGNLRRYVEAQARRRRSPSFASNSAAGSGATVGGSGGKEKRSRGRERAESNLMPPWQDVNADIMCQHRGLARSSQGNRAKRQVVDKRVWRELVLFFPAAVPFRAESVECSECRGLCA----NERKAEEAVKRQREQEIALPVLRALYGRKTGVPSAALSTPRGTPGSSAGPPSAARPACPLLPGIYHLLPRYWLNAWRAYVRDPRAPSPRTLDTALLLCEGHGLLLAPPHVEEFLSGERRALLGGLDPDRSGCVCEVVTPEEWDALTLCWP 437
BLAST of mRNA_F-serratus_M_contig1531.3665.1 vs. uniprot
Match: A0A835YTC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTC4_9STRA) HSP 1 Score: 290 bits (741), Expect = 3.900e-86 Identity = 167/409 (40.83%), Postives = 232/409 (56.72%), Query Frame = 3
Query: 648 LPAEVLQRLMLWLRASDITALSVXXXXXXXXXXXXXXXXAVASFVKNRYGRANPALREDDTAWKRDLETLRHAELTHLSALVVNSKPRHGKGYFLSKAWAGNLRRYVEAQARRRRSPLSSSPNSAGKEKRRRGRERAESNLMPPWPDANADITCHHGGLAHSPQG-TRCKRQVVDKRVWKELVAFFPGAKAFRVENPECLECLGKSLGKSTSEREAEEAVRREREREIS-LPVLKALYGRKTGVPSASLVTPPSANG-----NAANSPPKCPLLPGIYHLLPRYWLNSWRAYVRDPRAPSPRTLDTALLLCEGHGLLITPPHVEEFLAGSRRYLLGGLDPDRSGCVCEVLTPEEWDALTLLH-PCDFGVRFCIDPDNGTAHFNTKSCKSCDPCYIGDLYMRSSTRKISF 1850
LPAEV++R + + + D+ AL+ V +K+ Y + A + A D ++LR AEL H++ L+ + G+GY++SK WA N RR+VE+QAR R++ +S+GK+ RR R++S MPP PD NAD+TC HG L SP G TR +R+ +D R W+ + F+P A+ RV + EC C + + + R +++ +P L L R+ GVP++ LV N PP PL PG+YHL+PR WL+SWR YVRDP AP PR LD +LLLC+ HGLL+ PPH E++L G R LLG LD +RSG VCEV+T +EWDAL+ + PCDF VRF I PD ++ C CDPCY+ Y RK+SF
Sbjct: 23 LPAEVIRRSLTYALSYDLRALTCTCKAVADTLVSESSA-VVTHLLKHAYSVKDAAASSGNGA---DFDSLRFAELKHVATLLAAPEAAPGRGYYVSKQWANNFRRFVESQARLRKASTGGG-SSSGKQLRRL---RSDSGTMPPCPDVNADLTCSHGAL--SPAGATRGRRRTLDGRSWRAIKVFYPAARDLRVRDGECARCGAERAAAAXXXXXXXXQEKERRSGDLAAVPALSQLCCRRGGVPTSHLVCGDMRLAIRLAHNLDALPP--PLAPGLYHLVPRCWLSSWRTYVRDPGAPQPRPLDASLLLCDAHGLLLVPPHAEQWLRGDREKLLGALDTERSGYVCEVVTVDEWDALSERYGPCDFSVRFSIAPDGDAVAWSLPRCSRCDPCYVAQTYTTRVPRKLSF 419
BLAST of mRNA_F-serratus_M_contig1531.3665.1 vs. uniprot
Match: A0A4D9CUZ8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUZ8_9STRA) HSP 1 Score: 249 bits (635), Expect = 1.670e-69 Identity = 154/381 (40.42%), Postives = 210/381 (55.12%), Query Frame = 3
Query: 846 LETLRHAELTHLSALVVNSKPRHGKGYFLSKAWAGNLRRYVEAQARRRRSPLSSSPNSAGKE------------------KRRRGRERAESNLMPPWPDANADITCHHGGL------------------AHSP---QGTRC---KRQVVDKRVWKELVAFFPGAKAFRVE-NPECLECLGKSLGKSTSEREAEEAVRREREREISL-PVLKALYGRKTGVPSASLVTPPSANGNAANSPPKCPLLPGIYHLLPRYWLNSWRAYVRDPRAPSPRTLDTALLLCEGHGLLITPPHVEEFLAGSRRYLLGGLDPDRSGCVCEVLTPEEWDALTLLHPCDFGVRFCIDPDNGTAHFNTKSCKSCDPCYIGDLYM--RSSTRKISF 1850
LE LR E+ HL L+ +P G GYF+SKAW N RR+ EA + RR++ L + G+E +RR RER ES + PW + NADITC HGGL A SP G+ KR++++KR WK L ++ KAF+V ECL+C + E+E E RR R+ E+S P L ALY R+TG P +S PPS + +A PP L PG+YHLLPR WL WR Y+RDPRAP PR D +LLLCE HGL + PPH+ FL G ++ +L L RSG VCE+++ EEWD L +P D+ ++F +DP++ + ++T C C+P + D+ + R+ RK SF
Sbjct: 167 LEALRFQEVQHLHRLLSLPEPLSG-GYFVSKAWLSNHRRFAEALSARRKAALVQQQHQGGREXXXXXXXXXXDRERSSSGRRRNSRERRESEVSVPWGEVNADITCAHGGLMPALRPSPGSPPSVPSSPASSPLPLAGSGLVMGKRKIIEKRAWKALRRYYTEGKAFKVSATEECLQCSQRER----EEKERLEEERRNRDLELSASPALTALYARRTGCPPSSFALPPSPSSSALFLPP---LDPGLYHLLPRCWLTVWRNYLRDPRAPRPRPPDLSLLLCEAHGLPLVPPHISSFLDGEKKGVLSSLS-GRSGVVCEIVSVEEWDELMKHYPTDYCLKFSVDPEDLSIAWSTSPCARCEPG-VDDMSVTYRNRQRKWSF 537
BLAST of mRNA_F-serratus_M_contig1531.3665.1 vs. uniprot
Match: A0A482SYA4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYA4_9ARCH) HSP 1 Score: 166 bits (419), Expect = 6.600e-42 Identity = 101/269 (37.55%), Postives = 136/269 (50.56%), Query Frame = 3
Query: 999 LSSSPNSAGKEKRRRGRERAESNLMPPWPDANADITCHHGGLAHSPQGTRCKRQVVDKRVWKELVAFFPGAKAFRVENPECLECLGKSLGKSTSEREAEEAVRREREREISLPVLKALYGRKTGVPSASLVTPPSANGNAANSPPKCPLLPGIYHLLPRYWLNSWRAYVRDPRAPSPRTLDTALLLCEGHGLLITPPHVEEFLAGSRRYLLGGLDPDRSGCVCEVLTPEEWDALTLLHP--CDFGVRFCIDPDNGTAHFNTKSCKSCDP 1799
+S+S K+K + R+R S +PPWP NAD+ C H L + +R+ +D R W + ++ FR EC CL S E +EA +R E+ P L AL RK GVP + + P L G+Y+L+PR WL WR Y RD APS LD L+C HGLL+ PPH+EE++ G RR LLGGL G V E++ EEWD L ++ DFGVRFC+ +G+ +N C CDP
Sbjct: 28 VSTSKKGMPKKKATKMRQRRGSEALPPWPVVNADLICPHSQLTIG-KAPNARRKAIDSRAWLAIRRYYGLGPEFRCSAIECPSCLSDQHQSLQSVAEKKEAELEQRRLELVPPTLLALLERKQGVPEHCV-----HREHIDEEEPMYTLREGLYNLVPRDWLRQWRRYTRDLTAPSLTVLDCTRLICYSHGLLVLPPHLEEYILGVRRSLLGGLGT-YEGEVVELVCAEEWDELLRVNKGMTDFGVRFCLH--DGSLSWNVGVCHVCDP 287
BLAST of mRNA_F-serratus_M_contig1531.3665.1 vs. uniprot
Match: A0A7S3JS94_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JS94_9STRA) HSP 1 Score: 158 bits (399), Expect = 5.200e-38 Identity = 131/425 (30.82%), Postives = 196/425 (46.12%), Query Frame = 3
Query: 648 LPAEVLQRLMLWLRASDITALSVXXXXXXXXXXXXXXXXAVASFVKNRYGRANPALR-EDDTAWKRDLETLRHAELTHLSALVVNSKPRHGKGYFLSKAWAGNLRRYVEAQARRRRSPLSSSPNSAGKEKRRRGRERAESN-LMPPWPDANADITCHHGGLAHSPQGTRCKRQVVDKRVWKELVAFFPGAKAFRVENP-ECLECLGKSLGKSTSEREAEEAVRREREREISLP----------------VLKALYGR---KTGVPSASLVTPPSANGNAANSPPKCPLLPGIYHLLPRYWLNSWRAYVRDPRAPSPRTLDTALLLCEGHGLLITPPHVEEFLAGSRRYLLGGLDPDRSGCVCEVLTPEEWDALTLLHPCDFGVRFCI---DPDNGTAHFNTKSCKSCDPCYIGD---LYMRSSTR 1838
+P + + + + +L ASDI+A+ + F + P + +++ A R L+TLR AEL + + +++ +GY++SK+WA RRY EAQ R S+SPN+ +R RGR R+ S+ +PPWPDANA++ C HG L G R KR +VD+ W+ + FP + +V + EC CL + + R+ EE R + E++ L VL+ L + K G+P L + A PLL G YHL+PR WL WR+ +R R P +T LLC H + P + +L G L P+ S CEVL +EW AL L+P DF V F + P + T+ C CD D L+ RS ++
Sbjct: 6 IPNDAILQALSYLGASDISAIYITGRVAVEDIPGLCASVGGEVFQNLLKKQTTPKKKNKNELAAGRALQTLRVAELVKILNGLNDAQESGTRGYWVSKSWAQQFRRYTEAQ-RLLLGTESASPNNG---QRSRGRSRSSSSESLPPWPDANAELLCEHGSLGPR-NGPRAKRLIVDRSTWRTIAYRFPLSTKLKVSSAAECRFCL--QIKEERQIRQQEERSRLDHEKQKRLSELETQEEATHTKSTSSVLRRLASKERAKRGIPQHCLSADAAQERQALGLCGTPPLLVGRYHLVPRGWLQLWRSSLRSARHRRPGPPNTGDLLCMAHCKPLVPHELVTYLHGHAHRLTFPNPPNSS--TCEVLDAQEWTALNNLYPVDFAVAFDVTWSSPHTLHITWATEPCTLCDAAGRADDLDLHFRSRSK 421
BLAST of mRNA_F-serratus_M_contig1531.3665.1 vs. uniprot
Match: W7TU35_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TU35_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 7.760e-17 Identity = 95/292 (32.53%), Postives = 127/292 (43.49%), Query Frame = 3
Query: 846 LETLRHAELTHLSALVVNSKPRHGKGYFLSKAWAGNLRRYVEAQARRRRSPLSSSPNSAGKE------------------KRRRGRERAESNLMPPWPDANADITCHHGGLAH-------SPQGTRC-----------------KRQVVDKRVWKELVAFFPGAKAFRVE-NPECLECLGKSLGKSTSEREAEEAVRREREREISL-PVLKALYGRKT-GVPSASLVTPPSANGNAANSPPKCP--LLPGIYHLLPRYWLNSW---RAYVRDPRAPSPRTLDTALLLCEGHG 1571
LE LR E+ HL L+ +P G GY++SKAW N RR+ EA + RR++ L G+E +RR RER ES + PW + NADITC HGGL SP KR++++KR WK L ++ KAF+V ECL+C + E+E E RR R+ E+S P L AL PS L+ P + + P P L+ G+ L PR S R R P P + +A LL G G
Sbjct: 227 LEALRFQEVQHLHRLLSLPEPFSG-GYYVSKAWLSNHRRFAEALSARRKAALLQQQQQGGREXXXXXXXXXXDRERSSSGRRRNSRERRESEVSVPWGEVNADITCAHGGLMPVQRPSPGSPSSVPXXXXXXXXXLAGSGLVMGKRKIIEKRAWKALRRYYTEGKAFKVSATEECLQCSQRER----EEKERLEEERRNRDLELSASPALTALLPPLLLRPPSFLLLLRPLPSPARPRALPPSPSLLVDGLAQLPPRSPGASSSPPRPLPPSLRGPRPPSRPSAHLLLLGRG 513
BLAST of mRNA_F-serratus_M_contig1531.3665.1 vs. uniprot
Match: A0A7S0KC72_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KC72_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 7.380e-9 Identity = 44/108 (40.74%), Postives = 58/108 (53.70%), Query Frame = 3
Query: 1323 EISLPVL-KALYGRKTGVPSASLVTPPSANGNAANSPPKCPLLPGIYHLLPRYWLNSWRAYVRD----PRAPSPRTLDTALLLCEGHGLLITPPHVEEFLAGSRRYLL 1631
E+ +P KA+ VP SL TPP A G A CPL+PG+YH+LPR W WR Y+++ P AP + LLC+ H L + PPH++ FL G LL
Sbjct: 29 EVKMPSSGKAMLDGSVKVPH-SLYTPPEA-GIA------CPLVPGVYHVLPRSWCARWRRYIKNGGERPTAP-----EATELLCDAHKLPLIPPHLKSFLYGKADGLL 123
BLAST of mRNA_F-serratus_M_contig1531.3665.1 vs. uniprot
Match: A0A5N5L3P9_PANHP (Ubiquitinyl hydrolase 1 n=11 Tax=Siluroidei TaxID=1489793 RepID=A0A5N5L3P9_PANHP) HSP 1 Score: 68.6 bits (166), Expect = 4.820e-8 Identity = 59/246 (23.98%), Postives = 102/246 (41.46%), Query Frame = 3
Query: 1092 NADITCHHGGLAHSPQGTRCKRQVVDKRVWKELVAFFPGAKAFRVENPECLECLGKSLGKSTSEREAEEAVRREREREISLPVLKALYGRKTGVPSASLVTPPSANGNAANSPPKCPLLPGIYHLLPRYWLNSWRAYVRDPRAPSP-RTLDTALLLCEGHGLLITPPHVEEFLAGSRRYLLGGLDPDRSGCVCEVLTPEEWDALTLLHPCDFGVRFCI--DP--DNGTAHFNTKS--CKSCDPCYI 1808
N DI C HGGL+ +R++V VW +L +FP A F + C +C+ + E + EA+ R E +L + + PS K P I +++P ++++ WR ++R P +P ++ ++LLC G + T + L G +++ +L P EW+ + L D + C DP DNG ++T+ C+ C +I
Sbjct: 649 NEDILCSHGGLSIQES----ERRLVTGEVWSKLKVYFPKAPEFTQQQEPCQQCM-----RLEREGKENEALNRMMANEQKSSLLNLFHEKNR----------PSLQ--------KWPQDTDILYIVPLFFVDEWRKFIRKPAKSNPVSSIGNSILLCPHGGFMFT---YDSLLQGDAQHVA-------------LLWPAEWEVICRLFLVDQPISICRIHDPVQDNGNVQYHTQPELCRECREGFI 851
BLAST of mRNA_F-serratus_M_contig1531.3665.1 vs. uniprot
Match: A0A8C1R4L2_CYPCA (Ubiquitinyl hydrolase 1 n=8 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1R4L2_CYPCA) HSP 1 Score: 67.8 bits (164), Expect = 8.360e-8 Identity = 61/248 (24.60%), Postives = 98/248 (39.52%), Query Frame = 3
Query: 1092 NADITCHHGGLAHSPQGTRCKRQVVDKRVWKELVAFFPGAKAFRVENPECLECLGKSLGKSTSEREAEEAVRREREREISLPVLKALYGRKTGVPSASLVTPPSANGNAANSPP--KCPLLPGIYHLLPRYWLNSWRAYVRDPRAPSP-RTLDTALLLCEGHGLLITPPHVEEFLAGSRRYLLGGLDPDRSGCVCEVLTPEEWDALTLLHPCDFGVRFCI----DPDNGTAHFNTKS--CKSCDPCYI 1808
N DI C+HGGL R+VV VW +L +FP A F N C +C+ + E + EA+ R E +L L+ K N P K P + +++P Y+++ WR ++R P +P + +LLLC G + T + L G +++ +L P EW+ ++ + D + C DNG + T C+ C +I
Sbjct: 673 NEDILCYHGGLNILEND----RRVVSAEVWNKLRMYFPRAPEFTQNNEACQQCM-----RLEREGKENEALNRMMANEQKSSLLN-LFQEK-------------------NRPTLQKWPQETDVLYIVPHYFVDEWRKFIRRPAKSNPVSNVGNSLLLCPHGGFMFT---YDSMLQGDAQHIA-------------LLWPAEWEVISKMFLVDQAISICQIRDKTQDNGIVQYQTHPDLCRECREGFI 875
BLAST of mRNA_F-serratus_M_contig1531.3665.1 vs. uniprot
Match: A0A556V9D8_BAGYA (Ubiquitinyl hydrolase 1 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556V9D8_BAGYA) HSP 1 Score: 67.0 bits (162), Expect = 1.510e-7 Identity = 57/246 (23.17%), Postives = 97/246 (39.43%), Query Frame = 3
Query: 1092 NADITCHHGGLAHSPQGTRCKRQVVDKRVWKELVAFFPGAKAFRVENPECLECLGKSLGKSTSEREAEEAVRREREREISLPVLKALYGRKTGVPSASLVTPPSANGNAANSPPKCPLLPGIYHLLPRYWLNSWRAYVRDPRAPSP-RTLDTALLLCEGHGLLITPPHVEEFLAGSRRYLLGGLDPDRSGCVCEVLTPEEWDALTLLHPCDFGVRFCI------DPDNGTAHFNTKSCKSCDPCYI 1808
N DI C HGGL+ +R++V VW +L +FP A F + C +C+ + E + EA+ R E +L + + PS K P I +++P ++++ WR ++R P +P ++ ++LLC G + T E L G +++ +L P EWD + + D + C D N H + C+ C +I
Sbjct: 644 NEDILCSHGGLSIQES----ERRLVTCEVWSKLKVYFPRAPEFTQQQESCQQCM-----RLEKEGKENEALNRMMANEQKSSLLNLFHDKNR----------PSLQ--------KWPQDTDILYIVPLFFVDEWRKFIRKPAKSNPVSSIGNSILLCPHGGFMFT---YESLLQGDAQHVA-------------LLWPAEWDVICRMFLVDQPISICRIHDKVQDNTNVQYHTQPELCRECREGFI 846 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1531.3665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1531.3665.1 >prot_F-serratus_M_contig1531.3665.1 ID=prot_F-serratus_M_contig1531.3665.1|Name=mRNA_F-serratus_M_contig1531.3665.1|organism=Fucus serratus male|type=polypeptide|length=488bp MSSTSTLCSDVKKKHSSTSTRRDCLRGDGPAPCLHSAKPESTGTESSDDEback to top mRNA from alignment at F-serratus_M_contig1531:39894..49113+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1531.3665.1 ID=mRNA_F-serratus_M_contig1531.3665.1|Name=mRNA_F-serratus_M_contig1531.3665.1|organism=Fucus serratus male|type=mRNA|length=9220bp|location=Sequence derived from alignment at F-serratus_M_contig1531:39894..49113+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1531:39894..49113+ >mRNA_F-serratus_M_contig1531.3665.1 ID=mRNA_F-serratus_M_contig1531.3665.1|Name=mRNA_F-serratus_M_contig1531.3665.1|organism=Fucus serratus male|type=CDS|length=2928bp|location=Sequence derived from alignment at F-serratus_M_contig1531:39894..49113+ (Fucus serratus male)back to top |