mRNA_F-serratus_M_contig153.3646.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig153.3646.1 vs. uniprot
Match: A0A6H5L0E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0E2_9PHAE) HSP 1 Score: 164 bits (415), Expect = 3.640e-37 Identity = 309/796 (38.82%), Postives = 357/796 (44.85%), Query Frame = 3
Query: 1185 RSTELQTEQQRLRQAIADRRTASILLGMSG-TDDSHAGVQASNTSR----------VLGQSFGGMGARKPRQGMLLA-LECDDVGEGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSDGALGGEDATGVKRVGEADGQPKVGNPGDTERLLELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEGMIARLEEENQKLLE----SLEAIGTCDAVGGGTNTGPRYPVAAAVST----------GPAVASGTRASSVSPEAGVAGFEHPPCRAPPLVTPQ--------------------HAAAQ-----AHQVHSPPHPPSHQFANHA-FLHHGAHMQTQFRRHG-MYP--QHHVPAGPHLLQPVGAQHMGYYTQGSAGFSGGAVGSVGADV--NGARMVKPDSCTYDMSGGRMVPVSFVSHSGAHYP----QQHSVVQLSDSNSPFSPAQGKPP-----------VLSSPPQT--HLAYPLPEPSEGYQGVDG----QGQGA-GPPSYVSWVSASSAAKGIGVASKERLTSKNEITALPASSSVAETDRGDGATAAASEK---SWGDSKTA---SSINGTSSGQSXXXXXXXXXXXXXXXXXVRKSRKXXXXXXXXXXXXXGPAR---------HLARARADQARAVEKARQEEESQKKLDRDLSRGCQEAWKKMRRERNAKRKRGSTGKGGCDDYDGGSGDKESSSDHNRSTSPSIGESPDSGSDRGEGSCSSSTSSA----------SWMVGSEASSLLPGSSASSNMGRR 3260
RS ELQ EQ+RLRQAI DRRTASILL MSG T+DS L S G G+ +PR GML +E DD G+G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P+VGNPGD ERLLELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATE MIARLE EN+KL + S+ G GG + + + G AS T ++SP P P ++ Q H+A H H PPH QFANHA FLH A HG +YP QH V G H Q VG G+ G G GA + GAD NG +VK + ++ H G P HS Q S + PA PP +L+ PP AYP+PEP G QG+G G +V W SAS L+S + P G T+ S SKTA SS N XXXXXXXXXXXXXXXXX XX P+R E+Q +LDRDLSRGC EAW+K+RRER+AKRKR S G CD GG +H RS + +G CS S SWM SE+SS++PGS+ S + RR
Sbjct: 382 RSAELQAEQKRLRQAITDRRTASILLDMSGGTEDSQXXXXXXXXXXXXXXXXXXXXALAASVSG-GSSRPRAGMLRGNVESDDAGDGSESTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXPRVGNPGDAERLLELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEEMIARLERENRKLRDIMKTSVSGGGGGSXRXGGISRXXXXXXXXGLKSDGSDRKGFDGGADAASSTAKMNLSPT--------PMGHMPNFLSQQQQSTPXXXXXXXXXXXXXXXHSAGSPHFGAGHHAHPPPHLMQ-QFANHAAFLHPAAAAHLPPHLHGHVYPSPQHFVHPG-HSQQQVGYYPQGFDCVGGPGACAGAGSAAGADGAGNGNSVVKQEGQN-----------PYLQHQGVSAPPGGMMPHSNPQYLISYQGWPPATYGPPPAGALAGKLTPMLALPPHDPHQHAYPVPEPGAAALGYASWHASQGRGGPGTTPFVPWASAS-------------LSSPEDSLRQPQPRQXXXXXXRPGLTSPPSSDLPAKEAPSKTAPVSSSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESATTENSLSSSPSRTGRHXXXXXXXXXXXXXXXXXXXXXXATSENQNRLDRDLSRGCHEAWQKVRRERSAKRKRSS---GSCDGSSGGG-------EHRRSRGADL-----------DGGCSGSXXXXXXXXXXXXXXSWMESSESSSVMPGSTTSGDTARR 1112
BLAST of mRNA_F-serratus_M_contig153.3646.1 vs. uniprot
Match: D7FM31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM31_ECTSI) HSP 1 Score: 143 bits (361), Expect = 7.820e-31 Identity = 148/231 (64.07%), Postives = 159/231 (68.83%), Query Frame = 3
Query: 1185 RSTELQTEQQRLRQAIADRRTASILLGMSG-TDD---------------SHAGVQASNTSRV-LGQSFGGMGARKPRQGMLLA-LECDDVGEGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSDGALGGEDATGVKRVGEADGQPKVGNPGDTERLLELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEGMIARLEEENQKLLESLE 1823
RS ELQ EQ+RLRQAI DRRTASILL MSG T+D +AG +AS V L S G GA +PR GML +E DD G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P+VGNPGD ERLLELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATE MIARLE EN+KL +S++
Sbjct: 329 RSAELQAEQKRLRQAITDRRTASILLDMSGGTEDLQSGXXXXXXXXXXXRNAGSKASRDHHVALAASVSG-GASRPRAGMLRGNVESDDAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXPRVGNPGDAERLLELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEEMIARLERENRKLRDSMK 550
BLAST of mRNA_F-serratus_M_contig153.3646.1 vs. uniprot
Match: A0A7S2RAP5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAP5_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.260e-9 Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 3
Query: 1641 LELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEGMIARLEEENQKLLESLEAIGTCDA 1844
LEL +K RS+CTPEELEQIRRERNRMHAKRTR RKK LE + IA LE++NQ+L+ + I + A
Sbjct: 445 LELMKKDRSQCTPEELEQIRRERNRMHAKRTRVRKKAQLEDIQETIASLEKQNQELMRRVSRINSQSA 512
BLAST of mRNA_F-serratus_M_contig153.3646.1 vs. uniprot
Match: A0A6U2ACZ3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2ACZ3_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.320e-9 Identity = 69/220 (31.36%), Postives = 95/220 (43.18%), Query Frame = 3
Query: 1185 RSTELQTEQQRLRQAIADRRTASILLGMSGTDDSHAGVQASNTSRVLGQSFGGMGARKPRQGMLLALECDDVGEGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSDGALGGEDATGVKRVGEADGQPKVGNPG-----DTERLLELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEGMIARLEEENQKLLESLEAI 1829
R+ EL+ EQ RL+QAI ++ TASILLGM D +G A + + P+ LL +++ + N + + A G +G P++G D EL K RS+CTP EL++IRRERNRMHAKRTRDRK++ +E E MI +LE EN L LE +
Sbjct: 56 RADELKNEQLRLKQAINEKNTASILLGMFSRDGPASGGSAKDVN--------------PKVEELLRRSAEEIPDASK----------------------IPELPALILPGQHNSKKNKAAAQMQPPAAAAPLDGGGLEGSPEMGPQHGGLMPDDGIDYELLSKDRSKCTPAELDRIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLESENGLLQGHLEGL 239
BLAST of mRNA_F-serratus_M_contig153.3646.1 vs. uniprot
Match: A0A7S4VPU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VPU5_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.640e-9 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 3
Query: 1605 PKVGNPGDTERLLELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEGMIARLEEENQKLLESLEAI 1829
P GNP D EL K RS+CTP EL++IRRERNRMHAKRTRDRK++ +E E MI +LE ENQ L L ++
Sbjct: 134 PVAGNPNDGIDY-ELLGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGENQVLQSHLNSL 207
BLAST of mRNA_F-serratus_M_contig153.3646.1 vs. uniprot
Match: A0A7S2L7Q6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L7Q6_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.980e-9 Identity = 67/218 (30.73%), Postives = 100/218 (45.87%), Query Frame = 3
Query: 1185 RSTELQTEQQRLRQAIADRRTASILLGMSGTDDSHAGVQASNTSRVLGQSFGGMGARKPRQGMLLALECDDVGEGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSDGALGGEDATGVKRVGEA-DGQPKVGNPGDTERLLE--LSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEGMIARLEEENQKLLESLEAI 1829
R+ EL+ EQ RL+Q I ++ TA+IL+G+ T + A S+ + + P+ +LL +++ + +S+DGA ED T A DG+ G+ E ++ L K R CTP EL+QIRRERNRMHAKRTRDRK++ +E E MI +LE+EN L ++ +
Sbjct: 42 RADELKLEQIRLKQCINEKNTANILVGLFQTGEDSAAADGSDDTETAV-------SMDPQVEVLLKRPTEEIPDASK--------------------IPELPALILPGQHTKRKSSSSNDGAS--EDNTPTAAAAPAADGEGVTIPEGEQEDGIDYVLLGKDRGSCTPAELDQIRRERNRMHAKRTRDRKRIFMEEMETMIKQLEDENALLQGHMDKL 230
BLAST of mRNA_F-serratus_M_contig153.3646.1 vs. uniprot
Match: A0A7S4W4V3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W4V3_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.220e-9 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 3
Query: 1605 PKVGNPGDTERLLELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEGMIARLEEENQKLLESLEAI 1829
P GNP D EL K RS+CTP EL++IRRERNRMHAKRTRDRK++ +E E MI +LE ENQ L L ++
Sbjct: 134 PVAGNPNDGIDY-ELLGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGENQVLQSHLNSL 207
BLAST of mRNA_F-serratus_M_contig153.3646.1 vs. uniprot
Match: A0A7S4RSS5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RSS5_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 6.270e-9 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 3
Query: 1605 PKVGNPGDTERLLELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEGMIARLEEENQKLLESLEAI 1829
P GNP D EL K RS+CTP EL++IRRERNRMHAKRTRDRK++ +E E MI +LE ENQ L L ++
Sbjct: 306 PVAGNPNDGIDY-ELLGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGENQVLQSHLNSL 379
BLAST of mRNA_F-serratus_M_contig153.3646.1 vs. uniprot
Match: A0A7S0GDP0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GDP0_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.280e-7 Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 3
Query: 1656 KTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEGMIARLEEENQKL 1808
K RS CT EEL++IRRERNRMHAKRTRDRK++++E EG+I RL+EEN L
Sbjct: 126 KDRSTCTSEELDKIRRERNRMHAKRTRDRKRVYMEEMEGLIDRLQEENDIL 176
BLAST of mRNA_F-serratus_M_contig153.3646.1 vs. uniprot
Match: A0A1Z5JIQ7_FISSO (BZIP domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIQ7_FISSO) HSP 1 Score: 65.9 bits (159), Expect = 1.450e-7 Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 3
Query: 1644 ELSQKTRSECTPEELEQIRRERNRMHAKRTRDRKKLHLEATEGMIARLEEENQKLLESLEAI 1829
EL K RS+C+PEEL++IRRERNRMHAKRTRDRK+L E + +LE+EN LL+ L I
Sbjct: 103 ELLGKDRSQCSPEELDRIRRERNRMHAKRTRDRKRLFTEQMSEICRQLEDENDALLDYLTKI 164 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig153.3646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig153.3646.1 >prot_F-serratus_M_contig153.3646.1 ID=prot_F-serratus_M_contig153.3646.1|Name=mRNA_F-serratus_M_contig153.3646.1|organism=Fucus serratus male|type=polypeptide|length=1091bp MTDSYQRQQSGLGPHEPKMRPPTFTSPQQGLPRQTNLNVSPISRPAVNMGback to top mRNA from alignment at F-serratus_M_contig153:353317..358165- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig153.3646.1 ID=mRNA_F-serratus_M_contig153.3646.1|Name=mRNA_F-serratus_M_contig153.3646.1|organism=Fucus serratus male|type=mRNA|length=4849bp|location=Sequence derived from alignment at F-serratus_M_contig153:353317..358165- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig153:353317..358165- >mRNA_F-serratus_M_contig153.3646.1 ID=mRNA_F-serratus_M_contig153.3646.1|Name=mRNA_F-serratus_M_contig153.3646.1|organism=Fucus serratus male|type=CDS|length=6546bp|location=Sequence derived from alignment at F-serratus_M_contig153:353317..358165- (Fucus serratus male)back to top |