mRNA_F-serratus_M_contig153.3640.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig153.3640.1 vs. uniprot
Match: A0A6H5L173_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L173_9PHAE) HSP 1 Score: 447 bits (1151), Expect = 1.130e-149 Identity = 278/461 (60.30%), Postives = 310/461 (67.25%), Query Frame = 1
Query: 472 MAGAVAVQVAREDVFESC-------------HLRNDSTTLSQDPTSSQHPSNLESMV--EVRSPSADE------AGTGLNTAGNGNDDRPVAVEAPV--GDDSQAFGDGEGPSGITVARHSRLAPYKPGKMTVVLDMDECLLHSKFHGPGAASEAYRQLEQRPDAVTEVNSFWVALEDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQQVKGAFLKDLSVLGLETTDLTRTVLVDNNPLSFICQPTNGVLVASFYDDPNDTALASVMQLIRHLDHAGDVRPILKDMFRLDTLLAEYRNALFDEDGDADDEAVAVVDVANGT----EG--ETEEVDSLDEENIQASDVDDDASRHPTEEREPCEKEAEVATENAFVFDDGVRNVECAPAAPKDDDDDESVETEPCSEESGECSLGEESLVSGEEMELDLEF 1767
MAGAV VQVARE+VFE H R P ++ ++ + V RS + + AGTG G + P + EA G S G GP I VARH+RLAPYKPGKMTVVLDMDECLLHSKFHGPGAASEAYRQLE+RP+AV EVNSFWVAL+DGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQ VKGAFLKDLSVLG+E+TD++RTVLVDNNPLSFICQPTNG+LVASFYDDPNDTALASVMQLIRHLD AGDVRPILKDMFRLDTLL EYR ALFD++ DAD + ++D EG E + + + +VEC KDDDDDESV+TE CSE SG+ SLG+ESL S EEMEL+LEF
Sbjct: 1 MAGAVDVQVAREEVFEGFGKHGAAAGAPAQQHQRCGHAGAPPLPAAAAAVADQSAPVVANARSDAVPQGEAHVAAGTG--EPGTSSSLEPSSTEAAAVGGMASDQQGKQVGP--IVVARHTRLAPYKPGKMTVVLDMDECLLHSKFHGPGAASEAYRQLEERPNAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQ-VKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRAALFDDEDDADVDVDCILDXXXXXXXLLEGCLEAGQQERTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELQGEDVECL----KDDDDDESVKTEACSEGSGDSSLGDESLTSREEMELELEF 452
BLAST of mRNA_F-serratus_M_contig153.3640.1 vs. uniprot
Match: D7FM26_ECTSI (Putative nuclear LIM interactor-interacting protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM26_ECTSI) HSP 1 Score: 413 bits (1062), Expect = 3.700e-138 Identity = 230/329 (69.91%), Postives = 247/329 (75.08%), Query Frame = 1
Query: 793 MTVVLDMDECLLHSKFHGPGAASEAYRQLEQRPDAVTEVNSFWVALEDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQQVKGAFLKDLSVLGLETTDLTRTVLVDNNPLSFICQPTNGVLVASFYDDPNDTALASVMQLIRHLDHAGDVRPILKDMFRLDTLLAEYRNALFDEDGDADDEAVAVVDVANGTEGETEEVDSLDEENIQASDVDDDASRHPTEEREPCEKEAEVATENAFVFDDGVR----NVECAPAAPKDDDDDESVETEPCSEESGECSLGEESLVSGEEMELDLEF 1767
MTVVLDMDECLLHSKFHGPGAASEAYRQLE+RPDAV EVNSFWVAL+DGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQ VKGAFLKDLSVLG+E+TD++RTVLVDNNPLSFICQPTNG+LVASFYDDPNDTALASVMQLIRHLD AGDVRPILKDMFRLDTLL EYR ALFD+D DAD + + + D + +VEC KDDDDDESV+TE CSE SG+ SLG+ESL S EEMEL+LEF
Sbjct: 1 MTVVLDMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQ-VKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTALFDDDDDADVDCILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSANGDGQQQLQGEDVECL----KDDDDDESVKTEACSEGSGDSSLGDESLTSREEMELELEF 324
BLAST of mRNA_F-serratus_M_contig153.3640.1 vs. uniprot
Match: A0A836C7A9_9STRA (NLI interacting factor-like phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7A9_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.090e-81 Identity = 138/207 (66.67%), Postives = 165/207 (79.71%), Query Frame = 1
Query: 790 KMTVVLDMDECLLHSKFHGPGAASEAYRQLEQRPDAVTEVNSFWVALEDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQQVKGAFLKDLSVLG-LETTDLTRTVLVDNNPLSFICQPTNGVLVASFYDDPNDTALASVMQLIRHLDHAGDVRPILKDMFRLDTLLAEYRNALFDED 1407
++TV+LDMDECLLHSKFHG G+ YRQ E+RP+ + EVNSF + L+DG AQVN RPGL FLE LA+ + +VFTAAMPDYAGPVLD +DP G L +RLYRSSCRQ V+GAFLKDLSVLG + R VL+DNNP SF+CQPTNG+LV SFYDD DTALASV+QL++HL+HA DVRPIL+DMFRL++LL EYR LF E+
Sbjct: 28 RLTVILDMDECLLHSKFHGLGSID--YRQQEERPEDIGEVNSFCIPLDDG-VAQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQ-VRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAMLFPEE 230
BLAST of mRNA_F-serratus_M_contig153.3640.1 vs. uniprot
Match: A0A835Z333_9STRA (NLI interacting factor (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z333_9STRA) HSP 1 Score: 263 bits (671), Expect = 2.290e-81 Identity = 137/197 (69.54%), Postives = 154/197 (78.17%), Query Frame = 1
Query: 793 MTVVLDMDECLLHSKFHGPGAASEAYRQLEQRPDAVTEVNSFWVALEDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQQVKGAFLKDLSVLGLE-TTDLTRTVLVDNNPLSFICQPTNGVLVASFYDDPNDTALASVMQLIRHLDHAGDVRPILKDMFRLDTLLAE 1380
+TVVLDMDECLLHSKFHG GA S YRQ E RP+ V EVNSFW+AL+DG AQVN RPGL FLE LA+ + +VFTAAMPDYAGPVLD IDP G L RRLYR+SCRQ V+G FLKDLS LG T+ R VL+DNNP SF+CQPTNG+LV SFYDD DTALA VMQL+R L+ DVRPIL+DMFRL+ LL E
Sbjct: 1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDG-VAQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQ-VRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 195
BLAST of mRNA_F-serratus_M_contig153.3640.1 vs. uniprot
Match: A0A836CB86_9STRA (Putative CTD small phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB86_9STRA) HSP 1 Score: 206 bits (524), Expect = 2.950e-59 Identity = 109/199 (54.77%), Postives = 138/199 (69.35%), Query Frame = 1
Query: 790 KMTVVLDMDECLLHSKFHGPGAASEAYRQLEQRPDAVTEVNSFWVALEDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQQVKGAFLKDLSVLGLETTDLTRTVLVDNNPLSFICQPTNGVLVASFYDDPNDTALASVMQLIRHLDHAGDVRPILKDMFRLDTLLAEYR 1386
K+TVVLD+DECL+HS F + YRQ E RP+ + V+S + L + VN+RPGL FLE L+ DY+ +VFTA +YA VLD IDP+GT FH RLYR SCRQ +LKDL E L RTVLVDN+PLSFICQP+NG+LV+S+YDDP+D AL+SV++LIRHLD DVRP L +F L+ +L EY+
Sbjct: 17 KLTVVLDLDECLVHSVFPN----GDKYRQSEARPENINLVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEA--LERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQ 209
BLAST of mRNA_F-serratus_M_contig153.3640.1 vs. uniprot
Match: A0A662Y5D0_9STRA (FCP1 homology domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662Y5D0_9STRA) HSP 1 Score: 196 bits (499), Expect = 2.250e-55 Identity = 105/213 (49.30%), Postives = 141/213 (66.20%), Query Frame = 1
Query: 760 HSRLAPYKPGKMTVVLDMDECLLHSKFHGPGAASEAYRQLEQRPDAVTEV-NSFWVALEDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQQVKGAFLKDLSVLGLETTDLTRTVLVDNNPLSFICQPTNGVLVASFYDDPNDTALASVMQLIRHLDHAGDVRPILKDMFRLDTLLAEYRNAL 1395
H R A ++ +VLDMDECL+HSKF YRQ E RP+ + +SF + ++DG+ A VNKRPGLD FLE A+ ++ VFTA + Y P+LD +DPKG LF R +R+SC+Q+ KG FLKDLSV+ TDL+R +LVDNNP+SF+ QP+NG+ V SFYDD ND L S+ +++ L DVRP L +FRL LLAE++ +
Sbjct: 32 HVRAAGAGQERLALVLDMDECLVHSKFQN----EVEYRQSEYRPEELEAYGDSFEIVMDDGERAVVNKRPGLDRFLEEAAKHFDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRASCQQR-KGMFLKDLSVV---RTDLSRVILVDNNPVSFLLQPSNGIPVPSFYDDVNDRTLDSLTKVLASLQEVDDVRPRLHQLFRLADLLAEHQRVI 236
BLAST of mRNA_F-serratus_M_contig153.3640.1 vs. uniprot
Match: A0A7S2PH30_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PH30_9STRA) HSP 1 Score: 196 bits (497), Expect = 4.410e-55 Identity = 106/221 (47.96%), Postives = 143/221 (64.71%), Query Frame = 1
Query: 739 SGITVARHSRLAPY--KPGKMTVVLDMDECLLHSKFHGPGAASEAYRQLEQRPDAVTE--VNSFWVALEDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQQVK-GAFLKDLSVLGLETTDLTRTVLVDNNPLSFICQPTNGVLVASFYDDPNDTALASVMQLIRHLDHAGDVRPILKDMFRLDTLLAEYR 1386
+G ++ RHSR + + +VLDMDECL+HS+F ++ YRQ E RP A++ V SF + L DGD QVNKRPGLD FL+ + + T +FTAAM YA PVLD +DP+ T+ +R YR SC + G ++KDLS + L+ D R VLVDNNPLSF+ QP+NG+LV++FYD P+D L +V+ L+ L+ DVRP L DMF L LAE +
Sbjct: 17 NGGSLIRHSRFVGSCRRKSDLVLVLDMDECLIHSQF----LSNTEYRQDEYRPSAISSKSVESFRIELPDGDLVQVNKRPGLDEFLQTVTSKFETHIFTAAMEVYASPVLDSLDPENTMLGKRFYRESCSLNSELGVYVKDLSKI-LQDVDHKRVVLVDNNPLSFLAQPSNGILVSNFYDSPDDITLKAVVDLLERLETKNDVRPTLDDMFGLSAALAELQ 232
BLAST of mRNA_F-serratus_M_contig153.3640.1 vs. uniprot
Match: A0A3M6VFT3_9STRA (FCP1 homology domain-containing protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VFT3_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.640e-54 Identity = 101/203 (49.75%), Postives = 136/203 (67.00%), Query Frame = 1
Query: 790 KMTVVLDMDECLLHSKFHGPGAASEAYRQLEQRPDAVTE-VNSFWVALEDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQQVKGAFLKDLSVLGLETTDLTRTVLVDNNPLSFICQPTNGVLVASFYDDPNDTALASVMQLIRHLDHAGDVRPILKDMFRLDTLLAEYRNAL 1395
++ +VLDMDECL+HSKF YRQ E RP+ + E ++SF + +EDG+ A VNKRPGLD FLE A+ Y+ VFTA + Y P+LD +DPKG LF +R SC+Q+ KG FLKDLSV+ DL+R +LVDNNP+SF+ QP+NG+ V SFYDD D L S+ +++ + DVRP L +FRL LLAE++ +
Sbjct: 40 RIALVLDMDECLVHSKFQN----EVEYRQNEYRPEQLEEYIDSFEIVMEDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDVLDPKGNLFAGHFFRESCKQR-KGMFLKDLSVI--RDGDLSRVILVDNNPVSFLMQPSNGIPVPSFYDDTKDRTLESLSKVLASMQEVEDVRPRLHQLFRLADLLAEHQRVI 235
BLAST of mRNA_F-serratus_M_contig153.3640.1 vs. uniprot
Match: H3GXJ8_PHYRM (FCP1 homology domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3GXJ8_PHYRM) HSP 1 Score: 194 bits (493), Expect = 1.640e-54 Identity = 102/203 (50.25%), Postives = 137/203 (67.49%), Query Frame = 1
Query: 790 KMTVVLDMDECLLHSKFHGPGAASEAYRQLEQRPDAVTE-VNSFWVALEDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQQVKGAFLKDLSVLGLETTDLTRTVLVDNNPLSFICQPTNGVLVASFYDDPNDTALASVMQLIRHLDHAGDVRPILKDMFRLDTLLAEYRNAL 1395
++ +VLDMDECL+HSKF YRQ E RP+ + + +SF + ++DG+ A VNKRPGLD FLE A+ Y+ VFTA + Y P+LD +DPKG LF R +R SC+Q+ KG FLKDLSV+ DL+R +LVDNNP+SF+ QP+NG+ V SFYDD ND L S+ +++ L DVRP L +FRL LLAE++ +
Sbjct: 40 RLALVLDMDECLVHSKFQN----EVEYRQSEFRPEQLEDFADSFEIVMDDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRESCQQR-KGMFLKDLSVV--RGGDLSRVILVDNNPVSFLMQPSNGIPVPSFYDDANDRTLESLSKVLASLQEVEDVRPRLHQLFRLADLLAEHQRVI 235
BLAST of mRNA_F-serratus_M_contig153.3640.1 vs. uniprot
Match: K3WRS1_GLOUD (FCP1 homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRS1_GLOUD) HSP 1 Score: 192 bits (489), Expect = 1.250e-53 Identity = 103/220 (46.82%), Postives = 144/220 (65.45%), Query Frame = 1
Query: 739 SGITVARHSRLAPYKPGKMTVVLDMDECLLHSKFHGPGAASEAYRQLEQRPDAVTEVN-SFWVALEDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQQVKGAFLKDLSVLGLETTDLTRTVLVDNNPLSFICQPTNGVLVASFYDDPNDTALASVMQLIRHLDHAGDVRPILKDMFRLDTLLAEYRNAL 1395
SG A +P + ++ +VLDMDECL+HSKF+ YRQ E RP A+ + + SF + ++DG+ A V+KRPGLD FLE ++ ++ VFTA + Y P+LD +DPKGTLF R +R SC+Q+ KG FLKDL V+ DL++ +LVDNNP+SF+ QP+NG+ V SFYDD ND L S+ +++ L DVRP L +FRL LLAE++ +
Sbjct: 47 SGCHAASSVPSSPVEEERIALVLDMDECLVHSKFYN----EVEYRQSEYRPTALAQYDDSFEIVMDDGERAIVHKRPGLDKFLEEASKHFDVYVFTAGLEAYGKPILDELDPKGTLFTGRFFRESCQQR-KGMFLKDLRVV---RKDLSKVILVDNNPVSFLMQPSNGIPVPSFYDDANDRTLESLTKVLTSLRELDDVRPRLHQLFRLADLLAEHQRMI 258 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig153.3640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig153.3640.1 >prot_F-serratus_M_contig153.3640.1 ID=prot_F-serratus_M_contig153.3640.1|Name=mRNA_F-serratus_M_contig153.3640.1|organism=Fucus serratus male|type=polypeptide|length=433bp MAGAVAVQVAREDVFESCHLRNDSTTLSQDPTSSQHPSNLESMVEVRSPSback to top mRNA from alignment at F-serratus_M_contig153:220350..227392+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig153.3640.1 ID=mRNA_F-serratus_M_contig153.3640.1|Name=mRNA_F-serratus_M_contig153.3640.1|organism=Fucus serratus male|type=mRNA|length=7043bp|location=Sequence derived from alignment at F-serratus_M_contig153:220350..227392+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig153:220350..227392+ >mRNA_F-serratus_M_contig153.3640.1 ID=mRNA_F-serratus_M_contig153.3640.1|Name=mRNA_F-serratus_M_contig153.3640.1|organism=Fucus serratus male|type=CDS|length=2598bp|location=Sequence derived from alignment at F-serratus_M_contig153:220350..227392+ (Fucus serratus male)back to top |