mRNA_F-serratus_M_contig1529.3634.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1529.3634.1 vs. uniprot
Match: A0A6H5JU60_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU60_9PHAE) HSP 1 Score: 429 bits (1103), Expect = 5.770e-146 Identity = 255/402 (63.43%), Postives = 308/402 (76.62%), Query Frame = 1
Query: 64 MIGSLKLGAAAWIFLAFWPIHGDGRHVLLDEVLSDNPPPGQSDASCAHLVRAGLDEGVGAKGRPLVEPEVHHMVNAMRKSWWQCASAVANALAKYGTEVENAFQMEQRSITKNLNEIKSALESGKPVQSISPAFEWAQSGEWVYINAKMSHKLDAPATLNVVSEGVEMSDRSLKFAASKDHKRFALDLALHADIDPDPSSISWGSVGRVTFTLKKATGGVVWPALLAEGHKKPVNMHVWWSKQEEYADEIDAIEDALS---EAAESKTSKSGGD--DAAGVQA---DADASEEGVGAAPAAGDGGKGERESKPMTAEERVKKAKKEASTAFSKEKXARFXXXXXXXXXXXXXXXXXATTKXXXXXXXLRAKKAVVDEQFEELVQKKHAEIEAAAEASDRTEL 1245
M+ S G +A LA P GRH+LLD+VLSD PPPGQSDASCAH VR GLDEGV A GRP+VEPEVHH+V+AM+K WWQCASAVANALAKYG EVE+AFQMEQR+ITK+LNEIKSALE GKP+QSISPAFEWAQSG+WVYINAKMSHKLDAPATLNV+SEGV+M +RSLKFAA++DHKRFALDL+LH I+P+PS+IS+GSVGRVTFTLKKA GGV WP LLA+G KKPVNMHVWW+KQEE++DE+D +E E AE + GG + V++ D +AS+EG A M+ + ++ KK+ +TAF+KEK ARF XXXXXXXXXXXXX XXXXXX L+ +KA ++E+F LV+K+HAE+EA +A+ R+EL
Sbjct: 1 MVRSRGFGVSALGMLALSPSCTLGRHLLLDKVLSDKPPPGQSDASCAHYVRVGLDEGVDANGRPIVEPEVHHLVSAMQKGWWQCASAVANALAKYGPEVEDAFQMEQRTITKHLNEIKSALEKGKPMQSISPAFEWAQSGDWVYINAKMSHKLDAPATLNVISEGVQMEERSLKFAAARDHKRFALDLSLHDAIEPEPSTISFGSVGRVTFTLKKAKGGVKWPKLLADGQKKPVNMHVWWTKQEEHSDELDDLEXXXXXXXERAEKMAKEEGGGLPEQGKVESGDGDGNASKEGAAAT------------EDTMSPQRQLASKKKKVATAFAKEKRARFEELEXXXXXXXXXXXXXXXXXXXXXXXALQTRKASINEEFGLLVKKRHAELEAEHKANQRSEL 390
BLAST of mRNA_F-serratus_M_contig1529.3634.1 vs. uniprot
Match: A0A7S2CUV6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CUV6_9STRA) HSP 1 Score: 176 bits (447), Expect = 3.150e-48 Identity = 106/261 (40.61%), Postives = 145/261 (55.56%), Query Frame = 1
Query: 52 QDSEMIGSLKLGAAAWIFLAFWPIHGDGRHV--LLDEVLSDNPPPGQSDASCAHLVRAGLDEGVGAKGRPLVEPEVHHMVNAMRKSWWQCASAVANALAKYGTE-VENAFQMEQRSITKNLNEIKSALESGKPV-QSISPAFEWAQSGEWVYINAKMSHKLDAPATLNVVSEGVEMSDRSLKFAASKDHKRFALDLALHADIDPDPSSISWGSVGRVTFTLKKATGGVVWPALLAEGHKKPVNMHVWWSKQEEYADEIDAI 822
+M+ L+LG WIF + + GD + V LLD D SCA + AG E V A H+++AMR+ WW CA + A A G + +EN E R+ T L+ ++S LES +P Q ISPAF+WAQSG+ +++N K SHK+DAPATLN V +++ SL A K+ K F L L I+PD SS + SVGR+ T++K WP LL++ KKP NMH WW K EE++DEID +
Sbjct: 2 DSRQMLQLLRLGLV-WIFSSAL-VRGDIQDVTDLLDTA--------SDDGSCATI--AGNGEIVVASS---------HVIDAMRRGWWGCAEILGKAAAASGVDGIENDILQESRTYTNKLSALRSLLESAQPPSQIISPAFQWAQSGDSIFMNVKFSHKIDAPATLNSQIRAVNLTNNSLHLYAIKERKAFELSLGFFGAINPDESSWNAASVGRIVLTIRKTDVPAAWPKLLSDASKKPHNMHFWWDKAEEFSDEIDDL 241
BLAST of mRNA_F-serratus_M_contig1529.3634.1 vs. uniprot
Match: A0A7S3XUB6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUB6_HETAK) HSP 1 Score: 177 bits (449), Expect = 1.140e-47 Identity = 93/236 (39.41%), Postives = 134/236 (56.78%), Query Frame = 1
Query: 142 VLLDEVLSDNPPPGQS-DASCAHLVRAGLDEGVGAKGRPLVEPEVHHMVNAMRKSWWQCASAVANALAKYGTEVENAFQMEQRSITKNLNEIKSALESGKPVQSISPAFEWAQSGEWVYINAKMSHKLDAPATLNVVSEGVEMSDRSLKFAASKDHKRFALDLALHADIDPDPSSISWGSVGRVTFTLKKATGGVVWPALL--AEGHKKPVNMHVWWSKQEEYADEIDAIEDALSE 840
+ LD VL +S + C + +E G +V P+ H+ AMR+ WW CA + LA+ EN F +E RS+ +LN++KS + S K Q ISPAF+WAQS + +Y+N K +HKLDAPAT+N + + ++D L F AS+DHK F LDL ++D + SS GS G + TL+K G WPALL +KP NMH+WWS QE + ++ +++ D E
Sbjct: 37 LTLDNVLEQTEAMQESMEGECLSFLNGFEEEKEIPSG--VVHPK--HLTQAMRRGWWSCAHRIVECLAELDLSFENDFNLESRSVNVHLNKLKSLVMSAKKTQDISPAFQWAQSPDEIYLNVKFAHKLDAPATINAQKDEITITDNRLVFRASQDHKHFKLDLTFWGEVDSERSSWKMGSAGTASLTLRKRAAGDKWPALLDPEATPEKPANMHIWWSMQENFDEKFESMWDEKDE 268
BLAST of mRNA_F-serratus_M_contig1529.3634.1 vs. uniprot
Match: A0A7S4D729_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D729_HETAK) HSP 1 Score: 177 bits (449), Expect = 1.280e-47 Identity = 93/236 (39.41%), Postives = 134/236 (56.78%), Query Frame = 1
Query: 142 VLLDEVLSDNPPPGQS-DASCAHLVRAGLDEGVGAKGRPLVEPEVHHMVNAMRKSWWQCASAVANALAKYGTEVENAFQMEQRSITKNLNEIKSALESGKPVQSISPAFEWAQSGEWVYINAKMSHKLDAPATLNVVSEGVEMSDRSLKFAASKDHKRFALDLALHADIDPDPSSISWGSVGRVTFTLKKATGGVVWPALL--AEGHKKPVNMHVWWSKQEEYADEIDAIEDALSE 840
+ LD VL +S + C + +E G +V P+ H+ AMR+ WW CA + LA+ EN F +E RS+ +LN++KS + S K Q ISPAF+WAQS + +Y+N K +HKLDAPAT+N + + ++D L F AS+DHK F LDL ++D + SS GS G + TL+K G WPALL +KP NMH+WWS QE + ++ +++ D E
Sbjct: 37 LTLDNVLEQTEAMQESMEGECLSFLNGFEEEKEIPSG--VVHPK--HLTQAMRRGWWSCAHRIVECLAELDLSFENDFNLESRSVNVHLNKLKSLVMSAKKTQDISPAFQWAQSPDEIYLNVKFAHKLDAPATINAQKDEITITDNRLVFRASQDHKHFKLDLTFWGEVDSERSSWKMGSAGTASLTLRKRAAGDKWPALLDPEATPEKPANMHIWWSMQENFDEKFESMWDEKDE 268
BLAST of mRNA_F-serratus_M_contig1529.3634.1 vs. uniprot
Match: A0A7S2CS17_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CS17_9STRA) HSP 1 Score: 176 bits (447), Expect = 5.050e-47 Identity = 106/261 (40.61%), Postives = 145/261 (55.56%), Query Frame = 1
Query: 52 QDSEMIGSLKLGAAAWIFLAFWPIHGDGRHV--LLDEVLSDNPPPGQSDASCAHLVRAGLDEGVGAKGRPLVEPEVHHMVNAMRKSWWQCASAVANALAKYGTE-VENAFQMEQRSITKNLNEIKSALESGKPV-QSISPAFEWAQSGEWVYINAKMSHKLDAPATLNVVSEGVEMSDRSLKFAASKDHKRFALDLALHADIDPDPSSISWGSVGRVTFTLKKATGGVVWPALLAEGHKKPVNMHVWWSKQEEYADEIDAI 822
+M+ L+LG WIF + + GD + V LLD D SCA + AG E V A H+++AMR+ WW CA + A A G + +EN E R+ T L+ ++S LES +P Q ISPAF+WAQSG+ +++N K SHK+DAPATLN V +++ SL A K+ K F L L I+PD SS + SVGR+ T++K WP LL++ KKP NMH WW K EE++DEID +
Sbjct: 2 DSRQMLQLLRLGLV-WIFSSAL-VRGDIQDVTDLLDTA--------SDDGSCATI--AGNGEIVVASS---------HVIDAMRRGWWGCAEILGKAAAASGVDGIENDILQESRTYTNKLSALRSLLESAQPPSQIISPAFQWAQSGDSIFMNVKFSHKIDAPATLNSQIRAVNLTNNSLHLYAIKERKAFELSLGFFGAINPDESSWNAASVGRIVLTIRKTDVPAAWPKLLSDASKKPHNMHFWWDKAEEFSDEIDDL 241
BLAST of mRNA_F-serratus_M_contig1529.3634.1 vs. uniprot
Match: A0A836CBM1_9STRA (CS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM1_9STRA) HSP 1 Score: 174 bits (440), Expect = 8.010e-47 Identity = 89/183 (48.63%), Postives = 122/183 (66.67%), Query Frame = 1
Query: 289 AMRKSWWQCASAVANALA-KYGTEVENAFQMEQRSITKNLNEIKSALESGKPVQSISPAFEWAQSGEWVYINAKMSHKLDAPATLNVVSEGVEM-SDRSLKFAASKDHKRFALDLALHADIDPDPSSISWGSVGRVTFTLKKATGGVV-WPALLAEGHKKPVNMHVWWSKQEEYADEIDAIED 828
A+++ WW C+ + LA ++++ FQMEQRSIT+ LN +KS LE+ KP+Q +SPAFEWAQSG V+I+ K +HK+DAPATL V + V+M DR A++ K+F LDL L DIDP+ S+ GSVGR T LKK WP+LL EG KKP NMH W+ K E Y++E++ +E+
Sbjct: 50 ALQRGWWACSEELIKRLAVTMDKDLDHIFQMEQRSITRQLNSLKSVLEASKPMQQLSPAFEWAQSGNEVFISVKFAHKVDAPATLGVAVDSVDMVGDRVTLKASTTGRKQFLLDLQLFGDIDPEASTWQLGSVGRCTLQLKKMQEKPSRWPSLLKEGFKKPPNMHFWYDKHESYSEELETLEE 232
BLAST of mRNA_F-serratus_M_contig1529.3634.1 vs. uniprot
Match: A0A7R9YCY0_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCY0_9STRA) HSP 1 Score: 148 bits (373), Expect = 8.120e-37 Identity = 84/227 (37.00%), Postives = 128/227 (56.39%), Query Frame = 1
Query: 151 DEVLSDNPPPGQSDASCAHLVRAGLDEGVGAKGRPLVEPEVHHMVNAMRKSWWQCASAVANALAKYGT-EVENAFQMEQRSITKNLNEIKSALESGKPVQSISPAFEWAQSGEWVYINAKMSHKLDAPATLNVVSEGVEMSDRSLKFAASKDHKRFALDLALHADIDPDPSSISWGSVGRVTFTLKKATGGVVWPALLAEGHKKPVNMHVWWSKQEEYADEIDAIED 828
D +L+ P + C LV+ KG+ H+ M++SWW C+ V G ++E + + R++ K L +K+A+E K Q ++PAFEWAQS V++N K +HKLDAPATL+V + V ++++ + A K+ K F LDL+L I P+ SS GSVGR +FTL K W LL+ K+P NMH+WW+ Q++Y DE++A+E+
Sbjct: 22 DALLTALSSPETDETQCKELVQ----NAPKLKGK--------HLRATMQRSWWDCSLTVVELGTAQGVHDLEAEYNLASRTLKKQLGSLKTAIEGAKTTQVVNPAFEWAQSPNEVFLNVKFAHKLDAPATLDVKVQNVTITEKGVYLYAEKNSKHFELDLSLLLPIVPESSSWQLGSVGRCSFTLVKKMRKK-WDRLLSSA-KRPQNMHLWWTMQDQYDDELEAMEE 234
BLAST of mRNA_F-serratus_M_contig1529.3634.1 vs. uniprot
Match: A0A1J4MPC3_9CRYT (CS domain-containing protein n=1 Tax=Cryptosporidium ubiquitum TaxID=857276 RepID=A0A1J4MPC3_9CRYT) HSP 1 Score: 112 bits (280), Expect = 9.750e-25 Identity = 57/179 (31.84%), Postives = 99/179 (55.31%), Query Frame = 1
Query: 280 MVNAMRKSWWQCASAVANALAKYGTEVENAFQMEQRSITKNLNEIKSAL-ESGKPVQSISPAFEWAQSGEWVYINAKMSHKLDAPATLNVVSEGVEMSDRSLKFAASKDH----KRFALDLALHADIDPDPSSISWGSVGRVTFTLKKATGGVVWPALLAEGHKKPVNMHVWWSKQEEY 801
+ ++ + WW + + + G ++ + + SI + LNE+ L + V ++SPAF+WAQS + VY+N K +++ +AP L + +E V + D F+A H K++ L+L L ++D D S S+GSVG+++ TL K +WP LL + K NMH+WW +E++
Sbjct: 60 LTTSISRGWWTLSKKLIIKTHEQGIDLSPVVRSAELSIRRELNELTRLLNKKHSEVATLSPAFQWAQSSDLVYLNIKFTYRWNAPGALKIDNEIVSIHDNVFFFSAMGSHSHEKKKYVLNLELFDEVDSDLSECSFGSVGKLSCTLFKKKSNAIWPRLLKDQKLKIPNMHIWWEMREKH 238
BLAST of mRNA_F-serratus_M_contig1529.3634.1 vs. uniprot
Match: A0A1J4MVE0_9CRYT (CS domain-containing protein n=2 Tax=Cryptosporidium TaxID=5806 RepID=A0A1J4MVE0_9CRYT) HSP 1 Score: 111 bits (278), Expect = 2.060e-24 Identity = 57/176 (32.39%), Postives = 101/176 (57.39%), Query Frame = 1
Query: 289 AMRKSWWQCASAVANALAKYGTEVENAFQMEQRSITKNLNEIKSALESGKP-VQSISPAFEWAQSGEWVYINAKMSHKLDAPATLNVVSEGVEMSDRSLKFAA----SKDHKRFALDLALHADIDPDPSSISWGSVGRVTFTLKKATGGVVWPALLAEGHKKPVNMHVWWSKQEEY 801
++ + WW A + + ++ + + I K+L+E+ L + +SPAF+WAQS +++++N K +++ +AP L V +E V +++ + F+A S++ KR+ L L L +ID D S S+GSVG++T TL K V WP LL + ++K NMH+WW +E++
Sbjct: 67 SISRGWWDLAKQLVRRTHEQDIDLSSTVRASTLIIRKHLDELVRLLNKRHAEIALLSPAFQWAQSRDFIFLNIKFTYRWNAPGALKVENEVVSITNNTFYFSALGSHSQEMKRYELKLKLFDEIDTDKSEWSFGSVGKLTCTLAKKESNVKWPRLLKDQNEKIPNMHIWWEMKEKF 242
BLAST of mRNA_F-serratus_M_contig1529.3634.1 vs. uniprot
Match: A0A0S4TGX9_CRYHO (CS domain-containing protein n=4 Tax=Cryptosporidium TaxID=5806 RepID=A0A0S4TGX9_CRYHO) HSP 1 Score: 108 bits (270), Expect = 2.260e-23 Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 1
Query: 289 AMRKSWWQCASAVANALAKYGTEVENAFQMEQRSITKNLNEIKSAL-ESGKPVQSISPAFEWAQSGEWVYINAKMSHKLDAPATLNVVSEGVEMSDRSLKFAASKDH----KRFALDLALHADIDPDPSSISWGSVGRVTFTLKKATGGVVWPALLAEGHKKPVNMHVWWSKQEEY 801
++ + WW + + + G ++ + + SI + LNE+ L + + ++SPAF+WAQS + VY+N K +++ +AP L + +E V + D F+A H K++ L L L +ID D S S+GSVG+++ TL K +WP LL + K NMHVWW +E++
Sbjct: 59 SISRGWWILSRKLIIKTHEQGIDLSPVVRSAELSIRRELNELTRLLNKKHSEIATLSPAFQWAQSSDQVYLNIKFTYRWNAPGALKIENETVSIRDNIFFFSAMGSHSHEKKKYVLKLELFDNIDSDLSEWSFGSVGKLSCTLVKKEPNNIWPRLLKDQKLKIPNMHVWWEMKEKH 234 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1529.3634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1529.3634.1 >prot_F-serratus_M_contig1529.3634.1 ID=prot_F-serratus_M_contig1529.3634.1|Name=mRNA_F-serratus_M_contig1529.3634.1|organism=Fucus serratus male|type=polypeptide|length=416bp FFRSLWCVGARGGHHFLQDSEMIGSLKLGAAAWIFLAFWPIHGDGRHVLLback to top mRNA from alignment at F-serratus_M_contig1529:174318..181998- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1529.3634.1 ID=mRNA_F-serratus_M_contig1529.3634.1|Name=mRNA_F-serratus_M_contig1529.3634.1|organism=Fucus serratus male|type=mRNA|length=7681bp|location=Sequence derived from alignment at F-serratus_M_contig1529:174318..181998- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1529:174318..181998- >mRNA_F-serratus_M_contig1529.3634.1 ID=mRNA_F-serratus_M_contig1529.3634.1|Name=mRNA_F-serratus_M_contig1529.3634.1|organism=Fucus serratus male|type=CDS|length=2496bp|location=Sequence derived from alignment at F-serratus_M_contig1529:174318..181998- (Fucus serratus male)back to top |