mRNA_F-serratus_M_contig1529.3633.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1529.3633.1 vs. uniprot
Match: A0A6H5JZ10_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ10_9PHAE) HSP 1 Score: 204 bits (518), Expect = 2.710e-60 Identity = 88/126 (69.84%), Postives = 107/126 (84.92%), Query Frame = 1
Query: 1 WSKIAHEFLKGSRTGTQCATHWRMVLKPSLLKGVWSPEEDAVIFDCIARGIGDWSEVASFLPKRKARHCRERWETHLDPALSSGI-WSPEEETQLLGAVEAHGTNWNMVARHLSGRTELMVQQQWN 375
W+KIAH FLKGSRTGTQCATHW+MV+KP+LLKGVWSPEEDAVIFDC+ARG+ DW+EVA+ LPKRK +HCRERW HLDP L G W+ EE +L+ AVEA+GTNW+++ARH GR+E ++QQ WN
Sbjct: 9 WNKIAHHFLKGSRTGTQCATHWKMVVKPALLKGVWSPEEDAVIFDCVARGVTDWAEVAAALPKRKPKHCRERWSNHLDPNLRKGPGWTAAEEVKLVSAVEANGTNWSLIARHFPGRSEAVIQQHWN 134
BLAST of mRNA_F-serratus_M_contig1529.3633.1 vs. uniprot
Match: D8LKA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA8_ECTSI) HSP 1 Score: 202 bits (513), Expect = 7.990e-59 Identity = 87/126 (69.05%), Postives = 107/126 (84.92%), Query Frame = 1
Query: 1 WSKIAHEFLKGSRTGTQCATHWRMVLKPSLLKGVWSPEEDAVIFDCIARGIGDWSEVASFLPKRKARHCRERWETHLDPALSSGI-WSPEEETQLLGAVEAHGTNWNMVARHLSGRTELMVQQQWN 375
W+KIAH FLKGSRTGTQCATHW+MV+KP+LLKGVWS EEDAVIFDC+ARG+ DW+EVA+ LPKRK +HCRERW HLDP+L G W+ EE +L+ AVEA+GTNW+++ARH GR+E ++QQ WN
Sbjct: 146 WNKIAHHFLKGSRTGTQCATHWKMVVKPALLKGVWSAEEDAVIFDCVARGVTDWTEVAAALPKRKPKHCRERWSNHLDPSLRKGPGWTAAEEVKLVSAVEANGTNWSLIARHFPGRSEAVIQQHWN 271
BLAST of mRNA_F-serratus_M_contig1529.3633.1 vs. uniprot
Match: A0A2R5GBT4_9STRA (Transcription factor MYB3R-2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBT4_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.130e-31 Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 1
Query: 1 WSKIAHEFLKGSRTGTQCATHWRMVLKPSLLKGVWSPEEDAVIFDCIARGIGDWSEVASFLPKRKARHCRERWETHLDPALSSGIWSPEEETQLLGAVEAHGTNWNMVARHLSGRTELMVQQQWNA 378
W +I+ EFL G R+ QC W+ VLKP L+KG W+ EED I + I G+ WSE+A+ +P R + CRERW HLDP++ G W+ EE+ L+ E G W +A+ L GR+E V+ +WN+
Sbjct: 14 WKRISQEFLNGKRSDVQCLHRWQKVLKPGLIKGPWTKEEDDTIMEAIESGVTKWSEIATLIPGRIGKQCRERWFNHLDPSIKKGGWTEEEDRILVEYQEKLGNRWCEIAKVLPGRSENAVKNRWNS 139
BLAST of mRNA_F-serratus_M_contig1529.3633.1 vs. uniprot
Match: A0A5A8DBZ9_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DBZ9_CAFRO) HSP 1 Score: 125 bits (313), Expect = 1.290e-31 Identity = 56/126 (44.44%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 1 WSKIAHEFLKGSRTGTQCATHWRMVLKPSLLKGVWSPEEDAVIFDCIARGIGDWSEVASFLPKRKARHCRERWETHLDPALSSGIWSPEEETQLLGAVEAHGTNWNMVARHLSGRTELMVQQQWNA 378
W +I+ E+L+G RT QC W+ VL+P L+KG W+ EED VI +CI GI WSE++ +P R + CRERW HLDP++ WS EE+ L A + G W +A+ L GR+E V+ +WN+
Sbjct: 31 WKRISEEYLQGRRTDVQCLHRWQKVLRPGLVKGPWTTEEDQVIVNCINAGITKWSEISERIPGRIGKQCRERWFNHLDPSIKKDPWSAEEDRILEEAQCSIGNKWCEIAKLLPGRSENSVKNRWNS 156
BLAST of mRNA_F-serratus_M_contig1529.3633.1 vs. uniprot
Match: A0A2R5G768_9STRA (Transcription factor MYB3R-4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G768_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.330e-30 Identity = 56/126 (44.44%), Postives = 75/126 (59.52%), Query Frame = 1
Query: 1 WSKIAHEFLKGSRTGTQCATHWRMVLKPSLLKGVWSPEEDAVIFDCIARGIGDWSEVASFLPKRKARHCRERWETHLDPALSSGIWSPEEETQLLGAVEAHGTNWNMVARHLSGRTELMVQQQWNA 378
W KI+ E+L G R+ QC W+ VL+P L+KG W+ EED +I CI R I WSE+A +P R + CRERW HLDP + W+ EEE L+ A G W +A+ L GR E V+ +WN+
Sbjct: 195 WKKISEEYLGGRRSDVQCLHRWQKVLRPGLVKGPWTEEEDNMIRACIERKITKWSEIAERIPGRIGKQCRERWFNHLDPTIDHSAWTEEEEKVLVTAQATFGNRWCEIAKLLPGRPENAVKNRWNS 320
BLAST of mRNA_F-serratus_M_contig1529.3633.1 vs. uniprot
Match: A0A2R5GS76_9STRA (Transcription factor MYB3R-2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GS76_9STRA) HSP 1 Score: 122 bits (307), Expect = 3.330e-30 Identity = 56/127 (44.09%), Postives = 77/127 (60.63%), Query Frame = 1
Query: 1 WSKIAHEFLKGSRTGTQCATHWRMVLKPSLLKGVWSPEEDAVIFDCIARGIGDWSEVASFLPKRKARHCRERWETHLDPALSSGIWSPEEETQLLGAVEAHGTNWNMVAR-HLSGRTELMVQQQWNA 378
W +IA E+L +RT QC W+ VL+P L+KG W PEED I CI GI WSE+A+ +P R + CRERW HLDP + + W+ EE+ L+ G W+ +A+ +L GR E V+ +WNA
Sbjct: 156 WKRIASEYLADTRTDVQCLHRWQKVLRPGLVKGPWQPEEDETIRACIRSGITRWSEIATRVPGRIGKQCRERWFNHLDPNIRTDEWTEEEDQLLIEGQSKLGNKWSQIAKIYLPGRPENAVKNRWNA 282
BLAST of mRNA_F-serratus_M_contig1529.3633.1 vs. uniprot
Match: A0A7S3LND3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LND3_9STRA) HSP 1 Score: 118 bits (296), Expect = 4.820e-30 Identity = 52/125 (41.60%), Postives = 75/125 (60.00%), Query Frame = 1
Query: 1 WSKIAHEFLKGSRTGTQCATHWRMVLKPSLLKGVWSPEEDAVIFDCIARGIGDWSEVASFLPKRKARHCRERWETHLDPALSSGIWSPEEETQLLGAVEAHGTNWNMVARHLSGRTELMVQQQWN 375
W +I+ + R+ QC W+ VL+P L+KG W+ EED + CI GI WSE+AS++P R + CRERW HLDP + G W+ EE+ +L A +G W+ +A + GRTE V+ +WN
Sbjct: 32 WKRIS--LVVPGRSDVQCLHRWQKVLRPGLVKGPWTKEEDDTVRRCIETGIKKWSEIASYVPGRIGKQCRERWFNHLDPTILKGSWTKEEDEKLFKAQAEYGNRWSFIATLIPGRTENAVKNRWN 154
BLAST of mRNA_F-serratus_M_contig1529.3633.1 vs. uniprot
Match: A0A7S1GEG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEG8_9STRA) HSP 1 Score: 113 bits (283), Expect = 4.900e-29 Identity = 59/129 (45.74%), Postives = 74/129 (57.36%), Query Frame = 1
Query: 1 WSKIAHEFLKGSRTGTQCATHWRMVLKPSLLKGVWSPEEDAVIFDCIAR-GIGD--WSEVASFLPKRKARHCRERWETHLDPALSSGIWSPEEETQLLGAVEAHGTNWNMVARHLSGRTELMVQQQWNA 378
W +IA E L RT QC W VLKP L+KG W EED V+ D + + G+G WS +AS LP R + CRERW HLDPA+ G W EE+ + A G W +AR L GRTE V+ +WN+
Sbjct: 34 WKRIA-ETLGHGRTDVQCLHRWNKVLKPGLVKGPWLKEEDDVVRDMVMKYGVGQVRWSVIASKLPGRIGKQCRERWFNHLDPAIKKGGWMEEEDLLIFQAQREVGNKWCEIARMLPGRTENAVKNRWNS 161
BLAST of mRNA_F-serratus_M_contig1529.3633.1 vs. uniprot
Match: A0A7S0VPJ2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VPJ2_9CRYP) HSP 1 Score: 111 bits (278), Expect = 1.930e-28 Identity = 54/127 (42.52%), Postives = 72/127 (56.69%), Query Frame = 1
Query: 1 WSKIAHEFLKGSRTGTQCATHWRMVLKPSLLKGVWSPEEDAVIFDCIAR-GIGDWSEVASFLPKRKARHCRERWETHLDPALSSGIWSPEEETQLLGAVEAHGTNWNMVARHLSGRTELMVQQQWNA 378
W K+A E LK RT QC W+ VL P L+KG W+ EED + + R G WS +ASFLP R + CRERW HL+P + WS EE+ ++ A HG W +A L GRT+ ++ WN+
Sbjct: 62 WKKVAEE-LK-FRTDVQCLHRWQKVLNPELIKGPWTKEEDDTVVKLVHRHGPTKWSLIASFLPGRIGKQCRERWHNHLNPDIRKEEWSVEEDCTIIHATRVHGKKWARIANFLPGRTDNAIKNHWNS 186
BLAST of mRNA_F-serratus_M_contig1529.3633.1 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT) HSP 1 Score: 112 bits (281), Expect = 2.340e-28 Identity = 53/126 (42.06%), Postives = 74/126 (58.73%), Query Frame = 1
Query: 1 WSKIAHEFLKGSRTGTQCATHWRMVLKPSLLKGVWSPEEDAVIFDCIARGIGDWSEVASFLPKRKARHCRERWETHLDPALSSGIWSPEEETQLLGAVEAHGTNWNMVARHLSGRTELMVQQQWNA 378
W IA E R TQC W VL P L+KG W PEED ++ + +A G +W +VA+ +P R ++ CRERW HLDP++ G +SPEE+ +L A G W+ +A L GRTE V+ +W +
Sbjct: 105 WKSIAEEV--PGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKS 228 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1529.3633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1529.3633.1 >prot_F-serratus_M_contig1529.3633.1 ID=prot_F-serratus_M_contig1529.3633.1|Name=mRNA_F-serratus_M_contig1529.3633.1|organism=Fucus serratus male|type=polypeptide|length=126bp WSKIAHEFLKGSRTGTQCATHWRMVLKPSLLKGVWSPEEDAVIFDCIARGback to top mRNA from alignment at F-serratus_M_contig1529:165077..165454+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1529.3633.1 ID=mRNA_F-serratus_M_contig1529.3633.1|Name=mRNA_F-serratus_M_contig1529.3633.1|organism=Fucus serratus male|type=mRNA|length=378bp|location=Sequence derived from alignment at F-serratus_M_contig1529:165077..165454+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1529:165077..165454+ >mRNA_F-serratus_M_contig1529.3633.1 ID=mRNA_F-serratus_M_contig1529.3633.1|Name=mRNA_F-serratus_M_contig1529.3633.1|organism=Fucus serratus male|type=CDS|length=756bp|location=Sequence derived from alignment at F-serratus_M_contig1529:165077..165454+ (Fucus serratus male)back to top |