mRNA_F-serratus_M_contig1529.3632.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1529.3632.1
Unique NamemRNA_F-serratus_M_contig1529.3632.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1529.3632.1 vs. uniprot
Match: A0A6H5JUE4_9PHAE (Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE4_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 7.010e-135
Identity = 211/289 (73.01%), Postives = 233/289 (80.62%), Query Frame = 3
Query:  138 LESTVFARSPWLSSSGPGGEPSWTTEAGLEDLR---RQRPSEARRSLASSLVDAPHGLEESRRNGAGFEPYANNGGTAVAVAGRDFCIIAADTRLSDGYSILSRNVSRVYRLSENTHLATAGCWADTQGLLRLLRYLIRDYEIRQRRPMETKAVSRMLSTHLYYRRSFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERTRVACAGGGLNLMQPVLDRLDADKGKRGGDTG-----ECPVVAVGLEEALSLVKKAFVAGGERDISLGDAVEIVILTREGQRRERLDLKSH 980
            L  T    + W S       PSWTTE  +E+L    R++  +    +A SL+  P GLEESRRNGAGFEPYANNGGT VAVAG D+CIIAAD+RLSDGY+ILSRNV+RV+RLS +THLATAGCWADTQGLLRLL YLIRDYE+ QRR M TKAVSRMLSTHLYYRR FPFYTFNIVGGLDEEGIGAVYGYDAVGSFER RVACAGGGL+LMQPVLDRLDA +   G   G     E PVVAVGLEEAL+LV+KAFVAGGERDISLGD VEIV++TR+G RRERL LKSH
Sbjct:   16 LGGTGVVNASWTSGRRRSAGPSWTTEGDIEELAGAGRRQLGQQGTPIAESLLQTPPGLEESRRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERVRVACAGGGLSLMQPVLDRLDAAEAATGAGGGQRAGREQPVVAVGLEEALALVRKAFVAGGERDISLGDEVEIVVVTRKGHRRERLQLKSH 304          
BLAST of mRNA_F-serratus_M_contig1529.3632.1 vs. uniprot
Match: D8LKA7_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA7_ECTSI)

HSP 1 Score: 365 bits (938), Expect = 1.170e-121
Identity = 191/235 (81.28%), Postives = 207/235 (88.09%), Query Frame = 3
Query:  294 HGLEESR-RNGAGFEPYANNGGTAVAVAGRDFCIIAADTRLSDGYSILSRNVSRVYRLSENTHLATAGCWADTQGLLRLLRYLIRDYEIRQRRPMETKAVSRMLSTHLYYRRSFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERTRVACAGGGLNLMQPVLDRLDADKGKRG----GDTG-ECPVVAVGLEEALSLVKKAFVAGGERDISLGDAVEIVILTREGQRRERLDLKSH 980
            HGL  +  RNGAGFEPYANNGGT VAVAG D+CIIAAD+RLSDGY+ILSRNV+RV+RLS +THLATAGCWADTQGLLRLL YLIRDYE+ QRR M TKAVSRMLSTHLYYRR FPFYTFNIVGGLDEEGIGAVYGYDAVGSFER RVACAGGGL+LMQPVLDRLDA +   G    G  G E PVVAVGLEEAL+LV++AFVAGGERDISLGD VEIV++TR+G RRERL LKSH
Sbjct:   15 HGLRRATSRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERVRVACAGGGLSLMQPVLDRLDAAEAVTGAGGCGRAGREQPVVAVGLEEALALVRRAFVAGGERDISLGDEVEIVVVTRQGHRRERLQLKSH 249          
BLAST of mRNA_F-serratus_M_contig1529.3632.1 vs. uniprot
Match: A0A835YWZ6_9STRA (Nucleophile aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ6_9STRA)

HSP 1 Score: 235 bits (599), Expect = 5.220e-70
Identity = 121/227 (53.30%), Postives = 161/227 (70.93%), Query Frame = 3
Query:  303 EESRRNGAGFEPYANNGGTAVAVAGRDFCIIAADTRLSDGYSILSRNVSRVYRLS-ENTHLATAGCWADTQGLLRLLRYLIRDYEIRQRRPMETKAVSRMLSTHLYYRRSFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERTRVACAGGGLNLMQPVLDRLDADKGKRGGDTGECPVVAVGLEEALSLVKKAFVAGGERDISLGDAVEIVILTREGQRRERLDLKSH 980
            E+  +   G++PY +NGGT VAVAG DF II ADTRLS  Y+ILSR V+R++ +S   T + TAGCW+DTQGLL+ ++ L+ DYE +Q+  + T A++R+LS  LY RRSFPFYT NIV GLD EG GAVYGYD VGSFER +VAC GGG +L+QP++D L  D+          P+V+V  ++AL LVK+ FVA  ERDI++GD  EI+++  +G  R RL L +H
Sbjct:   77 EQVSKRADGWQPYEDNGGTVVAVAGPDFVIIGADTRLSVNYNILSRKVTRIHGISGARTFIGTAGCWSDTQGLLKAMQGLVGDYEWQQQHSISTAALARLLSNVLYSRRSFPFYTHNIVAGLDREGAGAVYGYDPVGSFERVKVACVGGGRSLLQPIMDHLAGDQDS--SLDRRKPLVSVSCDDALELVKEGFVAAAERDIAIGDEAEILVIDAQGVTRHRLALGTH 301          
BLAST of mRNA_F-serratus_M_contig1529.3632.1 vs. uniprot
Match: A0A250X805_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X805_9CHLO)

HSP 1 Score: 206 bits (524), Expect = 5.080e-60
Identity = 110/216 (50.93%), Postives = 150/216 (69.44%), Query Frame = 3
Query:  330 FEPYANNGGTAVAVAGRDFCIIAADTRLSDGYSILSRNVSRVYRLSENTHLATAGCWADTQGLLRLLRYLIRDYEIRQRRPMETKAVSRMLSTHLYYRRSFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERTRVACAGGGLNLMQPVLD-RLDADKGKRGGDTGECPVVAVGLEEALSLVKKAFVAGGERDISLGDAVEIVILTREGQRRERLDLK 974
            + PY +NGGT +AVAG D+CIIAA TR+S GYSIL+R+ S++ +LS    + +AG  AD + L ++L+     Y+    +PM   AV+++LS  LYY+R FP+YTFNIV GLD+ G+GAVY YDA+GS+ER+  AC G G  L+QPVLD +L AD            + ++ L++AL LVK AF + GERDI  GD VEIVI+T+EG R+ERL+LK
Sbjct:    3 WSPYDDNGGTVLAVAGLDYCIIAACTRMSTGYSILTRDSSKILQLSNEVCITSAGMQADAKALHKVLQMRNIMYQHNHSKPMSVSAVAQLLSNTLYYKRFFPYYTFNIVAGLDDAGVGAVYAYDAIGSYERSGYACQGSGKGLIQPVLDNQLKADSPLLIPPRNT--ITSLPLDQALDLVKDAFTSAGERDIYTGDEVEIVIITKEGTRKERLELK 216          
BLAST of mRNA_F-serratus_M_contig1529.3632.1 vs. uniprot
Match: A0A0L0DN64_THETB (Proteasome subunit beta n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DN64_THETB)

HSP 1 Score: 204 bits (520), Expect = 1.760e-58
Identity = 118/271 (43.54%), Postives = 165/271 (60.89%), Query Frame = 3
Query:  165 PWLSSSGPGGEPSWTTEAGLEDLRRQRPSEARRSLASSLVDAPHGLEESRRNGAGFEPYANNGGTAVAVAGRDFCIIAADTRLSDGYSILSRNVSRVYRLSENTHLATAGCWADTQGLLRLLRYLIRDYEIRQRRPMETKAVSRMLSTHLYYRRSFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERTRVACAGGGLNLMQPVLD-RLDADKGKRGGDTGECPVVAVGLEEALSLVKKAFVAGGERDISLGDAVEIVILTREGQRRERLDLK 974
            P L S GP G  +     G     +Q P    R  A+S   A   +    +  A F PY  NGGTA+A+AG+DFCI+A DTR+S GY I +RN  + YR+++   +A AG  AD   L+++LR+ I  YE +  +PM T+++++++ST LY RR FP Y F ++GGLDE+G+G+VYGYDAVGSFER+     G G +L+QPVLD + D        D        + L+E++ LVK  FV+ GERDI  GD+VE+ I+T +G R E  DLK
Sbjct:   30 PSLGSHGPSGPMAARLATG-----KQAPVAPSRFSAASSSSAAVTVGSGPKTAA-FSPYVLNGGTALALAGKDFCIVAGDTRMSAGYEIHTRNKPKTYRINDKCSIAMAGMQADATNLIKMLRFRIAMYERKMGKPMSTQSLAQLVSTTLYRRRFFPIYAFVVIGGLDEDGVGSVYGYDAVGSFERSTCCVQGSGTSLLQPVLDNQFDFKNHSIKPDE-------LTLDESIDLVKDVFVSAGERDIYTGDSVEMHIITADGVRVETFDLK 287          
BLAST of mRNA_F-serratus_M_contig1529.3632.1 vs. uniprot
Match: A0A2K3CN11_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CN11_CHLRE)

HSP 1 Score: 202 bits (514), Expect = 3.670e-58
Identity = 114/239 (47.70%), Postives = 152/239 (63.60%), Query Frame = 3
Query:  267 LASSLVDAPHGLEESRRNGAGFEPYANNGGTAVAVAGRDFCIIAADTRLSDGYSILSRNVSRVYRLSENTHLATAGCWADTQGLLRLLRYLIRDYEIRQRRPMETKAVSRMLSTHLYYRRSFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERTRVACAGGGLNLMQPVLDRLDADKGKRGGDTGECP---VVAVGLEEALSLVKKAFVAGGERDISLGDAVEIVILTREGQRRERLDLK 974
            L + L        + +R  A + PY +NGGT VAVAG D+CI+AA TR+S G+SIL+R  + + +LS+   +A+AG  AD + L +LL+     Y     RPM   A +++LS  LYY+R FPFYTFN+  GLDE+G GAVY YDA+GS+ER+   C G G  L+QPVLD    ++ K        P   + A+ LE+AL LVK AFV+ GERDI  GD VEI+I+TREG RR+ L LK
Sbjct:   10 LGNPLSKVQADAADGQRQHAAWSPYDDNGGTVVAVAGEDYCIVAASTRMSTGFSILTREATMMLQLSDKVVIASAGMQADRKALHKLLQARHVMYVHNHGRPMSLPATAQLLSNTLYYKRFFPFYTFNLCAGLDEQGRGAVYNYDAIGSYERSGYFCQGSGKELIQPVLD----NQLKAASPLALPPQNTLTALPLEQALDLVKDAFVSAGERDIYTGDQVEILIITREGVRRDSLQLK 244          
BLAST of mRNA_F-serratus_M_contig1529.3632.1 vs. uniprot
Match: L1JTG0_GUITC (Proteasome subunit beta n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JTG0_GUITC)

HSP 1 Score: 200 bits (509), Expect = 1.220e-57
Identity = 114/236 (48.31%), Postives = 152/236 (64.41%), Query Frame = 3
Query:  267 LASSLVDAPHGLEESRRNGAGFEPYANNGGTAVAVAGRDFCIIAADTRLSDGYSILSRNVSRVYRLSENTHLATAGCWADTQGLLRLLRYLIRDYEIRQRRPMETKAVSRMLSTHLYYRRSFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERTRVACAGGGLNLMQPVLDRLDADKGKRGGDTGECPVVAVGLEEALSLVKKAFVAGGERDISLGDAVEIVILTREGQRRERLDLK 974
            L +S V+ P   +ESR     F PY NNGGT +A+AG DFCIIAAD+RLS GYSILSRN  +V +L+  T +A++GC AD   L + L++ I+ Y  +  + M T AV++ML+T LY+RR FP+YTFNIVGGLD+ G G V+ YDA+G FER +   +G G  L++P LD L A K     +T   P +    +E L LVK  F + GERDI  GD V+I I+ + G R E+  LK
Sbjct:    6 LPTSQVEQP---KESR-----FSPYQNNGGTCLALAGADFCIIAADSRLSLGYSILSRNTPKVAQLTTKTCIASSGCNADMVTLQKYLKFKIQMYLHQHGKEMSTPAVAQMLATTLYHRRFFPYYTFNIVGGLDQNGEGCVFSYDAIGCFERLKYTVSGSGHALIEPFLDNLVAYK-----NTDNKPTIERSCDETLELVKDIFSSAGERDIYTGDFVDIYIIDKNGTRYEQFPLK 228          
BLAST of mRNA_F-serratus_M_contig1529.3632.1 vs. uniprot
Match: A0A7S1C425_9STRA (Proteasome subunit beta n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C425_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.830e-57
Identity = 103/217 (47.47%), Postives = 142/217 (65.44%), Query Frame = 3
Query:  327 GFEPYANNGGTAVAVAGRDFCIIAADTRLSDGYSILSRNVSRVYRLSENTHLATAGCWADTQGLLRLLRYLIRDYEIRQRRPMETKAVSRMLSTHLYYRRSFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERTRVACAGGGLNLMQPVLDRLDADKGKRGGDTGECPVVAVGLEEALSLVKKAFVAGGERDISLGDAVEIVILTREGQRRERLDLKS 977
            G+ PY  NGGTA+ +AG DFC++A DTRLS GYSILSR+V+R   L+++  +AT GCW D Q L ++L+  +  YE      +   AV++ML   LYYRR FP+Y FN+VGG+D EG GAV+ YDAVGSFER + A  G G  L+ P+LD L  +K +        P   + ++E + ++K  FV  GERDI  GD V+I I+T +G R+ER +LK+
Sbjct:   77 GWSPYDFNGGTALGIAGDDFCVLACDTRLSTGYSILSRDVNRAAVLTDHCVVATGGCWTDVQTLHKVLKSRVDMYEHEHESAITCTAVAQMLGNTLYYRRFFPYYAFNVVGGIDAEGKGAVFTYDAVGSFERVKYAAQGAGQKLIIPLLDNLVGNKNRTD------PARNLSIDETVEMMKDVFVTAGERDIYTGDNVDIYIMTADGMRKERFELKA 287          
BLAST of mRNA_F-serratus_M_contig1529.3632.1 vs. uniprot
Match: A0A7S0NAI0_9EUKA (Proteasome subunit beta n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0NAI0_9EUKA)

HSP 1 Score: 200 bits (509), Expect = 2.480e-57
Identity = 113/250 (45.20%), Postives = 156/250 (62.40%), Query Frame = 3
Query:  231 LRRQRPSEARRSLASSLVDAPHGLEESRRNGA---GFEPYANNGGTAVAVAGRDFCIIAADTRLSDGYSILSRNVSRVYRLSENTHLATAGCWADTQGLLRLLRYLIRDYEIRQRRPMETKAVSRMLSTHLYYRRSFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERTRVACAGGGLNLMQPVLDRLDADKGKRGGDTGECPVVAVGLEEALSLVKKAFVAGGERDISLGDAVEIVILTREGQRRERLDL 971
            L+ +RP     +  S+  + P  +E +   GA    F PY  NGGT +AVAG+DFCI+A DTR+S G+SI SRNVS++Y+L+ N  L TAG   D   L +LLR  +  YE +    M+  AV +ML   LY RR FP+YT+N+VGGLDE+G G VY YD VG++ER RV+  G   +L+QP+LD     + ++ G+        + L+E ++LVK AF + GERDI  GD+VEI I+T+EG R E   L
Sbjct:    3 LQPERPPATSHAAQSACGEGP--VEAAAHAGAMQARFSPYDYNGGTTLAVAGKDFCIVAGDTRMSTGFSIKSRNVSKIYKLAGNVVLGTAGFRGDITTLQKLLRAKLTSYEHQHGVTMKAHAVGQMLGNTLYGRRFFPYYTWNVVGGLDEDGCGVVYSYDPVGNYERVRVSVTGSAESLIQPLLDNQLERQHQQLGEKPPPLCTDLSLQETINLVKDAFYSAGERDIRTGDSVEICIITKEGVRMESYPL 250          
BLAST of mRNA_F-serratus_M_contig1529.3632.1 vs. uniprot
Match: A0A2P6TE46_CHLSO (Proteasome subunit beta n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TE46_CHLSO)

HSP 1 Score: 199 bits (507), Expect = 3.180e-57
Identity = 110/229 (48.03%), Postives = 150/229 (65.50%), Query Frame = 3
Query:  315 RNGAGFEPYANNGGTAVAVAGRDFCIIAADTRLSDGYSILSRNVSRVYRLSENTHLATAGCWADTQGLLRLLRYLIRDYEIRQRRPMETKAVSRMLSTHLYYRRSFPFYTFNIVGGLDEEGIGAVYGYDAVGSFERTRVACAGGGLNLMQPVLD-RLDADKGKRGGDTGECPVV--------AVGLEEALSLVKKAFVAGGERDISLGDAVEIVILTREGQRRERLDLK 974
            R  A + PY +NGGT VAVAG D+C++AA TR+S GYSIL+R+ +++ RL+    +A+AG  AD + L ++L      Y+   R+PM   A +++LS  LYY+R FP+YTFN+  GLDEEG GAVY YDA+GS+ER    C G G  L+QPVLD +L A            P+V        ++ LE+A+ LVK AFV+ GERDI  GD VEI+I+T+EG R +RL+LK
Sbjct:   19 RQHASWSPYDDNGGTVVAVAGDDYCVVAASTRMSTGYSILTRDKTKILRLNPKCVVASAGMQADMETLHKMLHMRHVTYQFNHRKPMSCPATAQLLSNTLYYKRFFPYYTFNLCAGLDEEGKGAVYTYDAIGSYERVGYGCQGSGKELIQPVLDNQLKAAS----------PLVLPQQQWLSSLPLEQAVDLVKGAFVSAGERDIYTGDDVEILIITKEGVRTDRLELK 237          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1529.3632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUE4_9PHAE7.010e-13573.01Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKA7_ECTSI1.170e-12181.28Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A835YWZ6_9STRA5.220e-7053.30Nucleophile aminohydrolase n=1 Tax=Tribonema minus... [more]
A0A250X805_9CHLO5.080e-6050.93Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A0L0DN64_THETB1.760e-5843.54Proteasome subunit beta n=1 Tax=Thecamonas trahens... [more]
A0A2K3CN11_CHLRE3.670e-5847.70Uncharacterized protein n=2 Tax=Chlamydomonas TaxI... [more]
L1JTG0_GUITC1.220e-5748.31Proteasome subunit beta n=1 Tax=Guillardia theta (... [more]
A0A7S1C425_9STRA1.830e-5747.47Proteasome subunit beta n=1 Tax=Bicosoecida sp. CB... [more]
A0A7S0NAI0_9EUKA2.480e-5745.20Proteasome subunit beta n=1 Tax=Phaeocystis antarc... [more]
A0A2P6TE46_CHLSO3.180e-5748.03Proteasome subunit beta n=1 Tax=Chlorella sorokini... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1529contigF-serratus_M_contig1529:159499..163199 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score368.2
Seed ortholog evalue3.5e-99
Seed eggNOG ortholog2880.D8LKA7
Preferred namePSMB1
KEGG koko:K02732
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
Hectar predicted targeting categorysignal peptide
GOsGO:0000502,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0005886,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006952,GO:0006955,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009620,GO:0009814,GO:0009817,GO:0009896,GO:0009987,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016020,GO:0016192,GO:0016579,GO:0019538,GO:0019748,GO:0019774,GO:0019941,GO:0030071,GO:0030141,GO:0030163,GO:0031331,GO:0031410,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0031984,GO:0032270,GO:0032436,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0034774,GO:0036211,GO:0036230,GO:0042119,GO:0042175,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045055,GO:0045087,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046903,GO:0048046,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051247,GO:0051603,GO:0051704,GO:0051707,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060205,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071944,GO:0090068,GO:0097708,GO:0098542,GO:0098827,GO:0099503,GO:0101002,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0179@2759
Ec32 ortholog descriptionproteasome beta subunit
Ec32 orthologEc-01_009560.1
EC3.4.25.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
Exons5
Model size1542
Cds size894
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929516.9995637-UTR-F-serratus_M_contig1529:159498..1600571622929516.9995637-UTR-F-serratus_M_contig1529:159498..160057Fucus serratus maleUTRF-serratus_M_contig1529 159499..160057 -
1690962888.570349-UTR-F-serratus_M_contig1529:159498..1600571690962888.570349-UTR-F-serratus_M_contig1529:159498..160057Fucus serratus maleUTRF-serratus_M_contig1529 159499..160057 -
1622929517.0820687-UTR-F-serratus_M_contig1529:163110..1631991622929517.0820687-UTR-F-serratus_M_contig1529:163110..163199Fucus serratus maleUTRF-serratus_M_contig1529 163111..163199 -
1690962888.6515272-UTR-F-serratus_M_contig1529:163110..1631991690962888.6515272-UTR-F-serratus_M_contig1529:163110..163199Fucus serratus maleUTRF-serratus_M_contig1529 163111..163199 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929517.0131583-CDS-F-serratus_M_contig1529:160057..1603651622929517.0131583-CDS-F-serratus_M_contig1529:160057..160365Fucus serratus maleCDSF-serratus_M_contig1529 160058..160365 -
1690962888.5855637-CDS-F-serratus_M_contig1529:160057..1603651690962888.5855637-CDS-F-serratus_M_contig1529:160057..160365Fucus serratus maleCDSF-serratus_M_contig1529 160058..160365 -
1622929517.028842-CDS-F-serratus_M_contig1529:160922..1610641622929517.028842-CDS-F-serratus_M_contig1529:160922..161064Fucus serratus maleCDSF-serratus_M_contig1529 160923..161064 -
1690962888.6091156-CDS-F-serratus_M_contig1529:160922..1610641690962888.6091156-CDS-F-serratus_M_contig1529:160922..161064Fucus serratus maleCDSF-serratus_M_contig1529 160923..161064 -
1622929517.041204-CDS-F-serratus_M_contig1529:161340..1615571622929517.041204-CDS-F-serratus_M_contig1529:161340..161557Fucus serratus maleCDSF-serratus_M_contig1529 161341..161557 -
1690962888.6218987-CDS-F-serratus_M_contig1529:161340..1615571690962888.6218987-CDS-F-serratus_M_contig1529:161340..161557Fucus serratus maleCDSF-serratus_M_contig1529 161341..161557 -
1622929517.0542438-CDS-F-serratus_M_contig1529:162527..1626161622929517.0542438-CDS-F-serratus_M_contig1529:162527..162616Fucus serratus maleCDSF-serratus_M_contig1529 162528..162616 -
1690962888.6319923-CDS-F-serratus_M_contig1529:162527..1626161690962888.6319923-CDS-F-serratus_M_contig1529:162527..162616Fucus serratus maleCDSF-serratus_M_contig1529 162528..162616 -
1622929517.0682058-CDS-F-serratus_M_contig1529:162972..1631101622929517.0682058-CDS-F-serratus_M_contig1529:162972..163110Fucus serratus maleCDSF-serratus_M_contig1529 162973..163110 -
1690962888.6419148-CDS-F-serratus_M_contig1529:162972..1631101690962888.6419148-CDS-F-serratus_M_contig1529:162972..163110Fucus serratus maleCDSF-serratus_M_contig1529 162973..163110 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1529.3632.1prot_F-serratus_M_contig1529.3632.1Fucus serratus malepolypeptideF-serratus_M_contig1529 160058..163110 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1529.3632.1

>prot_F-serratus_M_contig1529.3632.1 ID=prot_F-serratus_M_contig1529.3632.1|Name=mRNA_F-serratus_M_contig1529.3632.1|organism=Fucus serratus male|type=polypeptide|length=298bp
MLIMRISCISITLAVLLESTVFARSPWLSSSGPGGEPSWTTEAGLEDLRR
QRPSEARRSLASSLVDAPHGLEESRRNGAGFEPYANNGGTAVAVAGRDFC
IIAADTRLSDGYSILSRNVSRVYRLSENTHLATAGCWADTQGLLRLLRYL
IRDYEIRQRRPMETKAVSRMLSTHLYYRRSFPFYTFNIVGGLDEEGIGAV
YGYDAVGSFERTRVACAGGGLNLMQPVLDRLDADKGKRGGDTGECPVVAV
GLEEALSLVKKAFVAGGERDISLGDAVEIVILTREGQRRERLDLKSH*
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mRNA from alignment at F-serratus_M_contig1529:159499..163199-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1529.3632.1 ID=mRNA_F-serratus_M_contig1529.3632.1|Name=mRNA_F-serratus_M_contig1529.3632.1|organism=Fucus serratus male|type=mRNA|length=3701bp|location=Sequence derived from alignment at F-serratus_M_contig1529:159499..163199- (Fucus serratus male)
TACGTAATGCACTCGCTGTCCATAAACTGTGCACTCCACCATCGAGTTCA AGGTGGACCGTGCGTGCAATATTACGTGTGCATGAACCCATGTTGATAAT GCGAATCAGTTGTATTAGTATTACACTAGCGGTACTTCTCGAATCTACTG TATTCGCACGGTCCCCATGGCTTTCTAGCAGCGGTCCAGGAGGCGAACCG TCATGGACGACGGAGGCTGGTCTCGAGGTGAGATCATCGTCTCGACATTT TGTTGGATCGGCGCGTGACCCTTCGTGATCATGGTGTCGCTCTTCTGACG GTCCTGTGTTGAAAGCTCGCTGGGTTCTCTTTAGTAAAAGGTTTGCGACA CACCTCAAGCTGAGACGTCTTGAAAACCCAACTTTTAAAAGAAATTTCAG GTTTTCGGTACCACGAAGTTACTGCTGTTGTCATCATCACATGTGGAGCT GTCTTCCTCCAGAGAGCATCGCTCGTAGGCACACTGTCTGAGGCTCCTCT ACGTTCACCACCTATTAGAAAACTATTTTGGAGGTAGAAGTCTAAGCTGT TGGTGTTAATCATGTTTCAACGCTGCCATCTAGGACTTGAGGCGGCAACG ACCGAGCGAGGCGAGGAGGTCGCTCGCGTCATCTCTTGTAGATGCGCCAC ACGGGCTCGAAGAATCTCGACGGTGAGAAGCTTCGTGGACTGCGTTATCG TTTTTAATACAAAAAATACATCACGGTAGCAGCCAATTTCCGCAGCGGTT TTTATGCACGGTAATTGCCACCTTCGAAGTCGGTCGCATTTTTACGAGTG CGCGAAGAGGAGTGTTCTGTAAGTTGCGGAGGTGTGGAGGTCGATCCGTC GATACTCACCAAACGGCCTAGCGGCAGGTGTGCTCTCATTCGTTATTCTT GCTAATTTGTTCGTGTTTGCCTCTTTATCATCCCCGATTTGTCCTTCTCG ACCAAACCTCTAATGGCGGTGGGTTTTGAGCTAAGGATCGGTTCAGTTGA CATTGCTTGACAACATCGAGATGATCTGTAGCTAGAGGTCGCCCGACCGG TCACGAAGACTCCACCATTTGCACTCTGCCCTTGGCTTTCTTCGCGCGAA AAAGTTTGCAACGTTTGCAAACTGTGCAAGCCGCATATACTTTGTACTGG GTGTATTGTTATTAATAAAATGTACTGGTGGCAAATTTCGTACGTGAAGT CGTTCCAAATTTTCAAGATATCCTCCAGCAGTTTTGCGAGCAGACCTGGC TCTCAAAACTGCCCCAGCTGCGTGTTGGATTATGTCAGCACGGCAGCGAC ATGGTCGCTTCGTAGCCAGTTCCTTTAATCGCTTGATGACTTCGTCGCTA GTGAAGATCGACACGTAACGCGAATCTCCCGCAGAGGGCGAATGCTGTCG CGGTGATAGCAACAGTGACGGTAATCGTAGCAGCGAAAGCGCCCAGAAAT GTTGTCACGTAGTCAGCCCTTGACGACCCCGTTCCGTCACCGGGAGCTGC TTTTGGTCCCTACGTTGGTAACAGTAACCCTGCAGAGCGCAATCCAACAA AGCACGGATGGTACGTAAATGTTGCAAGTGTTTGCGCAGGGAAATCTGGC GGACGCGCTTGACGAATGAACAACCCTTGCCCTGTGCGCCAGAAATGGGG CGGGATTCGAGCCGTACGCCAACAACGGCGGAACAGCCGTCGCGGTAGCC GGGCGCGACTTTTGCATCATCGCCGCCGACACACGATTGAGCGACGGTTA CTCGATCTTGAGCCGAAACGTGTCGCGCGTCTATCGCCTCTCAGAGAACA CACACCTTGCGACGGCCGGGTGTTGGGCGGACACCCAGGGTTTGCTTCGC TTGCTTCGGGTGAGGGCATAATATTCCGCGAGATCTCTTCTACATATTCA TCTTCAGCATGCCCGCTGTTTATGCGCCCGGTGAATCTCTAAGCTGATAT TTGATGTTTTTATAACGGCAAGCGTAATACATGAAAGGCTCTTGAGTCTC TGGGAGATACAGTTACGATTCCACACGTCGATAATACGTTCGTTAGAGCT GTTCTTCGCAATAGACCCATCGATTGACTTCTCGAAACATTTCTGCCGGG TCTCACTCTTGTCAACTCTCTGAAACACTCAACAGTACTTGATACGTGAT TACGAGATACGGCAACGCCGGCCAATGGAGACAAAGGCAGTGAGCCGCAT GCTTAGCACTCATTTGTACTACCGAAGAAGTTTCCCCTTCTATACCTTCA ACATCGTAGGTGGCCTGGACGAGGAAGGTGCGTTAAGCATAACTATCGGT CGGTGCATCTGGTTGTCGAAGCAAGTATATTGGTGGGGAGCTCTCGTGCA GCACAGCCGCGTGTCGATTAGAACGGGTAGAGATATCGCGCACATGACTC GGCTTCAGCGAGAAGGCTCTGTGATGACGTCTGCGGCGCGTCGTCCGGGC ATCACAACCCGTTGTCTGTGGCGGTGCGCTTTGCAAGTCATAACCTCAAC GCATGTCGCGTATCGTTTGACTATGGCATAACCCTTATACAGTGTTATAA TCACGTACTAATCTTAGCTACCCTCATCCTTCTTCTGGCTCTGCCGGGAA ATTCCCTCGCTTTATGTTGGCGTAACTTAACGAATGATATCAATGCTGAC TAAAATAATGAAGAAAATCATACACAAGCATCTCGGTCCCTGTCGTGTCG GAACATGCATTTCGAGTCGTTCAACGATCGAGGGGGGGGGGATGTCGCCA ATTTGTCCCCGTTTGGGAAGGAGACGGCACATGTCTTACAAGGTTCGTCT TAGAAATGCCTCTGCGTCTTGGCCGGATGTACAGGTATCGGGGCTGTTTA CGGGTACGACGCCGTCGGCTCCTTCGAAAGAACTAGGGTGGCTTGCGCCG GCGGCGGTCTCAACCTAATGCAACCCGTACTCGATCGTCTCGACGCCGAC AAAGGAAAAAGAGGCGGAGACACGGGGGAATGTCCAGTAGTAGCAGTGGG GCTAGAAGAGGCGCTGTCGTTGGTGAAGAAAGCTTTTGTGGCTGGGGGTG AGCGGGACATCAGTCTGGGAGACGCGGTTGAGATCGTGATTTTGACTCGA GAAGGCCAGAGACGAGAACGTCTTGACCTCAAATCCCACTGAACGTTTTT CACGGCGAAGAGGGGGAACTTCCGATCGATACTCGTCCGTGTTGTATTAG ATGCATGCCTCACGAAAAACGACAACGCCCAACATTTCGGACGAACAACT TGTTGGAAACTCTGTCGCTCGTACCGAAACCCGCTCTTGCTCTCACAGGC ACTATTATTAGTATTGCCACACAAACACCAAGTAGGCGAGGGAACGCAAG TATAGCAAGTTTAAAAGCGGCACGATATTACTATAAGTTAGTGCGGTATA TGGTGGTGACCCGCCCAGCGGATAGGACGGAAGAGTACGAGTTACTTCTC CCGGGTAAGGTATACGGTATTATACTATGCTACTGGGACAGGGCCACCCC GGGGAATACTTAACGCCGCTGCGTGCGGCATTGTTACTCTTACTATTTAA AACTAATACGGAGTACTAAAAGTACATCGGTCGAGAGTACCTCTTACGAA ACCAGCGTTTATGTTCCACACGTATTTCATTGATAGAGCGTAGCGTCTCA AACTTTTCAGGACTTCACTTACTACTGTAGAACCTTTGATCCTATACCTT C
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Coding sequence (CDS) from alignment at F-serratus_M_contig1529:159499..163199-

>mRNA_F-serratus_M_contig1529.3632.1 ID=mRNA_F-serratus_M_contig1529.3632.1|Name=mRNA_F-serratus_M_contig1529.3632.1|organism=Fucus serratus male|type=CDS|length=1788bp|location=Sequence derived from alignment at F-serratus_M_contig1529:159499..163199- (Fucus serratus male)
ATGTTGATAATGCGAATCAGTTGTATTAGTATTACACTAGCGGTACTTCT
CGAATCTACTGTATTCGCACGGTCCCCATGGCTTTCTAGCAGCGGTCCAG
GAGGCGAACCGTCATGGACGACGGAGGCTGGTCTCGAGATGTTGATAATG
CGAATCAGTTGTATTAGTATTACACTAGCGGTACTTCTCGAATCTACTGT
ATTCGCACGGTCCCCATGGCTTTCTAGCAGCGGTCCAGGAGGCGAACCGT
CATGGACGACGGAGGCTGGTCTCGAGGACTTGAGGCGGCAACGACCGAGC
GAGGCGAGGAGGTCGCTCGCGTCATCTCTTGTAGATGCGCCACACGGGCT
CGAAGAATCTCGACGGACTTGAGGCGGCAACGACCGAGCGAGGCGAGGAG
GTCGCTCGCGTCATCTCTTGTAGATGCGCCACACGGGCTCGAAGAATCTC
GACGAAATGGGGCGGGATTCGAGCCGTACGCCAACAACGGCGGAACAGCC
GTCGCGGTAGCCGGGCGCGACTTTTGCATCATCGCCGCCGACACACGATT
GAGCGACGGTTACTCGATCTTGAGCCGAAACGTGTCGCGCGTCTATCGCC
TCTCAGAGAACACACACCTTGCGACGGCCGGGTGTTGGGCGGACACCCAG
GGTTTGCTTCGCTTGCTTCGGAAATGGGGCGGGATTCGAGCCGTACGCCA
ACAACGGCGGAACAGCCGTCGCGGTAGCCGGGCGCGACTTTTGCATCATC
GCCGCCGACACACGATTGAGCGACGGTTACTCGATCTTGAGCCGAAACGT
GTCGCGCGTCTATCGCCTCTCAGAGAACACACACCTTGCGACGGCCGGGT
GTTGGGCGGACACCCAGGGTTTGCTTCGCTTGCTTCGGTACTTGATACGT
GATTACGAGATACGGCAACGCCGGCCAATGGAGACAAAGGCAGTGAGCCG
CATGCTTAGCACTCATTTGTACTACCGAAGAAGTTTCCCCTTCTATACCT
TCAACATCGTAGGTGGCCTGGACGAGGAAGTACTTGATACGTGATTACGA
GATACGGCAACGCCGGCCAATGGAGACAAAGGCAGTGAGCCGCATGCTTA
GCACTCATTTGTACTACCGAAGAAGTTTCCCCTTCTATACCTTCAACATC
GTAGGTGGCCTGGACGAGGAAGGTATCGGGGCTGTTTACGGGTACGACGC
CGTCGGCTCCTTCGAAAGAACTAGGGTGGCTTGCGCCGGCGGCGGTCTCA
ACCTAATGCAACCCGTACTCGATCGTCTCGACGCCGACAAAGGAAAAAGA
GGCGGAGACACGGGGGAATGTCCAGTAGTAGCAGTGGGGCTAGAAGAGGC
GCTGTCGTTGGTGAAGAAAGCTTTTGTGGCTGGGGGTGAGCGGGACATCA
GTCTGGGAGACGCGGTTGAGATCGTGATTTTGACTCGAGAAGGCCAGAGA
CGAGAACGTCTTGACCTCAAATCCCACTGAGTATCGGGGCTGTTTACGGG
TACGACGCCGTCGGCTCCTTCGAAAGAACTAGGGTGGCTTGCGCCGGCGG
CGGTCTCAACCTAATGCAACCCGTACTCGATCGTCTCGACGCCGACAAAG
GAAAAAGAGGCGGAGACACGGGGGAATGTCCAGTAGTAGCAGTGGGGCTA
GAAGAGGCGCTGTCGTTGGTGAAGAAAGCTTTTGTGGCTGGGGGTGAGCG
GGACATCAGTCTGGGAGACGCGGTTGAGATCGTGATTTTGACTCGAGAAG
GCCAGAGACGAGAACGTCTTGACCTCAAATCCCACTGA
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