mRNA_F-serratus_M_contig1528.3624.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1528.3624.1 vs. uniprot
Match: D7FNH7_ECTSI (Tetracycline-efflux transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH7_ECTSI) HSP 1 Score: 463 bits (1191), Expect = 2.280e-148 Identity = 261/476 (54.83%), Postives = 315/476 (66.18%), Query Frame = 2
Query: 134 RRLTLCLFLSAITTSILSQVYPKIILLHFEGDDRKASTYRGWLATAVSVTQLVFVPVLCSVSDVVGRRAVIAGAFVLHGAAAFVLSTTPSSLIWATMLDLVTCLCIVNIPLSQAIMIDIAAGGGKGATHGLGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAALLSLFVLGWEETAPKRVAAS---------EEDDAESDA-------------------------------ETTGSVDG----SDCEQQRGTEGKIRP---KISNPVSIFTVFLESRLLLQIALSYFLFILSLNVFAVGYNYLDFRFHWSPLEISYFFATFNALMALVSGLCIRFIVPRHLSEENGALFGTCIQGCAGVAYGLCYRGWMLFPALAFGALQNITEPCLQAIMATFVAKDRQGSLQGAVTSLRIIGEGVAAPIFSHTFSAGCTVRFEQAPFFLAAIFSFVSLTITWWPLREMDKRQRTL 1420
R+LT C+ L I S+++QVYPKIILL GDD +AS YRGWLA VSV QL+FVP + SDVVGR+AV+ A VLH + L+ SL WAT+ L T +CIV +P+SQAIMID++ GKGATHGLGIA+GA AL S GDIIGGSL+E +R ACLV+ S A+LLSL + GW ETAP V EE + DA E T SVD D +Q G G+ R K NP+S+ VFLESR LL+IA SYFLF+LSLNVFA GYNY+D+RF W+P EISYFFAT+N LMAL G IRFIVP+ L+EE GALFG +Q + + GLC+RGWML+PAL FGALQNITEPCLQAIMATFV + QGSLQGAV SLR++GEGVAAP+F+ FSAG +V FE+APFFLA S VSL + WWPLR++DK + +
Sbjct: 74 RKLTACILLYTIGASMMTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADSLAWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGASALGFSAGDIIGGSLTEHHRGAACLVSAAFSAASLLSLALFGWRETAPPLVGEGWQRWLWWRVEEQERIDDAVVGMNDDDDVGANRGICGRDVAAVVQGGDAVEATASVDSFVWDDDGKQGAGGRGRARRSGRKQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVMVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFSAGASVGFEEAPFFLATAISLVSLAVAWWPLRKLDKTKNIV 549
BLAST of mRNA_F-serratus_M_contig1528.3624.1 vs. uniprot
Match: D7FNH6_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH6_ECTSI) HSP 1 Score: 338 bits (866), Expect = 7.600e-102 Identity = 198/448 (44.20%), Postives = 273/448 (60.94%), Query Frame = 2
Query: 89 AVNVPQQLIAAAVVRRRLTLCLFLSAITTSILSQVYPKIILLHFEGDDRKASTYRGWLATAVSVTQLVFVPVLCSVSDVVGRRAVIAGAFVLHGAAAFVLSTTPSSLIWATMLDLVTCLCIVNIPLSQAIMIDI----AAGGGKGATHGLGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAALLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRPKISNPVSIFTVFLESRLLLQIALSYFLFILSLNVFAVGYNYLDFRFHWSPLEISYFFATFNALMALVSGLCIRFIVPRHLSEENGALFGTCIQGCAGVAYGLCYRGWMLFPALAFGALQNITEPCLQAIMATFVAKDRQGSLQGAVTSLRIIGEGVAAPIFSHTFSAGCTVRFEQA--------PFFLAAIFSFVSLTITWWPLRE 1396
A +VP+ L VRRRL++CLFL + +I+SQVYPK++L HF+ D+ +AS + GWL + QL+ +P LC SDV+GRRA++AGA L ++F L PSS+ ++ +V+ + +P+SQA++ID+ AA GG THGLG+ A LA+SVG ++GGSL+E + AC ++ +S+ +LSL GWEETAP A A ++A G G RG+ +I NP S+ VFLES LL+Q+A+ F LSLNVF+V YNY DFR+HWSPL+IS FF+TF L+AL SGL IRF+VP+ LS G L G +Q + +GL +GWM + L LQ ITEPC+Q +MA V DRQGSLQGAV LR + +G+A ++ FS G + R E A P F A+ +LTI W+ LR+
Sbjct: 36 ATSVPRGLTKGDRVRRRLSVCLFLHIVGVAIISQVYPKVVLEHFDHDNGEASRFTGWLTLVSCIVQLIAIPTLCGASDVIGRRAILAGALALTAVSSFSLGLAPSSIAVVSVCQVVSGVANAILPISQAVVIDLSHWGAAAGGGEVTHGLGLIGAAFGLAVSVGPVLGGSLTEDHAGTACWLSASMSVLGVLSLKFFGWEETAP--AATQGAGGATANASAGG---GWKKLCARGSSSRI----VNPFSVLKVFLESSLLMQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDISLFFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSTRVENALGFVLPGLPLFCASGCGATALTIAWYALRK 474
BLAST of mRNA_F-serratus_M_contig1528.3624.1 vs. uniprot
Match: A0A6H5L7V6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V6_9PHAE) HSP 1 Score: 203 bits (516), Expect = 6.710e-55 Identity = 111/194 (57.22%), Postives = 138/194 (71.13%), Query Frame = 2
Query: 116 AAAVVRRRLTLCLFLSAITTSILSQVYPKIILLHFEGDDRKASTYRGWLATAVSVTQLVFVPVLCSVSDVVGRRAVIAGAFVLHGAAAFVLSTTPSSLIWATMLDLVTCLCIVNIPLSQAIMIDIAAGGGKGATHGLGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAALLSLFVLGWEETAPKRV 697
AAA V R+LT C+ L I S+++QVYPKIILL GDD +AS YRGWLA VSV QL+FVP + SDVVGR+ V+ A VLH ++ L+ SL+WAT+ L T +CIV +P+SQAIMID++ GKGATHGLGIA+GA AL S GDIIGGSL+E +R ACLV+ + A+LLSL + GW ETAP V
Sbjct: 28 AAAAVHRKLTACILLYTIGASMMTQVYPKIILLSSGGDDGEASKYRGWLAAGVSVIQLLFVPAISGSSDVVGRKVVVCFAQVLHASSVLALAAMADSLVWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGACALGFSAGDIIGGSLAEHHRGAACLVSAAFATASLLSLMLFGWRETAPPLV 221
BLAST of mRNA_F-serratus_M_contig1528.3624.1 vs. uniprot
Match: A0A835YXD6_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD6_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.420e-35 Identity = 133/492 (27.03%), Postives = 208/492 (42.28%), Query Frame = 2
Query: 176 SILSQVYPKIILLHFEGDDRKASTYRGWLATAVSVTQLVFVPVLCSVSDVVGRRAVIAGAFVLHGAAAFVLSTTPSSLIWATMLDLVTCLCIVNIPLSQAIMIDIAAGGGKGATHGLGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSM-----------AALLSLFVL---GWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEG-KIRPKISNPVSIFTVFLESRLLLQI--------------------------------------------ALSYFLFILSLNVFAVGYNYLDFRFHWSPLEISYFFATFNALMALVSGLCIRFIVPRHLSEENGALFGTCIQGCAGVAYGLCYRGWMLFPALAFGALQNITEPCLQAIMATFVAKDRQGSLQGAVTSLRIIGEGVAAPIFSHTFSAGCT---------VRFEQAPFFLAAIFSFVSLT--ITWWPLREMDKRQRTLDDGASAD 1441
+I +QVYPK++L ++ GDD K +++ GW++ S+ Q V P L + DV GRR ++ A F+ +P+++ A + ++T +C V IP+SQAI+ D+ G A HG G+ G L L +G ++GG L+ +R AC A G ++ ALL+L V GWEET A D S +R + ++ NPV+I L R ++ A YF ++ F Y LD+RF W P++I F A F + V L IR +VPR +++ G IQ +G+ +GW L+ AL + A R GSLQGA+ SLRI+ +G+A P++ F+ G + R F AA+ S L ++ P+ + ++ + DD A A+
Sbjct: 202 AIQAQVYPKVVLSYYGGDDGKTASFLGWVSGGSSMLQFVLSPSLTASCDVRGRRGLLLAAAGAQALICFIWGFSPNNIGLAAAVAVITGMCGVVIPVSQAIISDVTRHDGAAAAHGFGVIAGTFGLGLCIGPLLGGWLTNVHRPAACFTAAGAALLAHCWWRWWAGTALLALLVATVWGWEETYVPDAA-----------------DASRAALRRSMSSTRYHWQVVNPVAIIGTVLHKRRTRRLPSAAQAARAQTVVSGPLSAAGCTRXXXXXXXXXXXXXXXXXXXXACVYFCACTAIGSFNSWYTLLDYRFGWGPVQIGAFCAAFGLGITAVQSLVIRAVVPRLMTQARAVPVGMAIQALGMGLFGIANKGWELYAITPISALSS----------AAATDASRLGSLQGALFSLRILSQGLAGPLYGALFNLGISDALRDALGGTRLPGLAFLAAALASLAGLAFALSVPPVAMLSEKALSGDDAALAE 666
BLAST of mRNA_F-serratus_M_contig1528.3624.1 vs. uniprot
Match: UPI001BE1A699 (TCR/Tet family MFS transporter n=1 Tax=Dyadobacter sp. CECT 9275 TaxID=2822344 RepID=UPI001BE1A699) HSP 1 Score: 102 bits (255), Expect = 1.590e-19 Identity = 107/413 (25.91%), Postives = 177/413 (42.86%), Query Frame = 2
Query: 152 LFLSAITTSILSQVYPKIILLHFEGDD-RKASTYRGWLATAVSVTQLVFVPVLCSVSDVVGRRAVIAGAFVLHGAAAFVLSTTPSSLIWATMLDLVTCLCIVNIPLSQAIMIDIAAGGGKGATHGL-GIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAALLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTE-GKIRPKISNPVSIFTVFLESRLLLQIALSYFLFILSLNVFAVGYN-YLDFRFHWSPLEISYFFATFNALMALVSGLCIRFIVPRHLSEENGALFGTCIQGCAGVAYGLCYRGWMLFPALAFGALQNITEPCLQAIMATFVAKDRQGSLQGAVTSLRIIGEGVAAPIFSHTFS----AGCTVRFEQAPFFLAAIFSFVS 1366
L + I I+ V PK+I GD +AS GWL A S TQ + P++ +SD GRR V+ + G L+ P+ L W + ++ L + A + DI+ + A GL G A+G L +G ++GG L + + A GLS+ L + + E P E +R E G+ +NP+ ++ + S L ++L+ ++ Y+ +F W+ +I Y L A + G IR I+P+ L ++ G G + Y GW ++ + L +I P LQ I++T VA++ QG LQGA+TSL+ + + P+ ++ F+ AG + F AP +AA + +S
Sbjct: 16 LLIDIIGLGIIIPVMPKLIA-ELTGDSISEASRDGGWLLFAYSFTQFICAPIIGGLSDRFGRRPVLLASLFGFGIDYIFLAFAPT-LAWLYVGRVIAGLMGASFTTGAAYIADISTPEKRAANFGLLGAAFG---LGFIIGPVMGGLLGQYGSRVPFMAAAGLSLLNFLYGYFILPESLLP--------------------------ENRRKFEWGR-----ANPIGSLQRLKNYPVIYGLIASLTLLYIALHAVQSNWSFYVIEKFGWNEAQIGYSLGAVGLLSAFIQGYLIRLILPK-LGQKRGVYLGLLLYAVGFGLYAFASEGWTMYVFMIPYILGSIAGPSLQGIISTQVARNEQGELQGALTSLQSLTSIIGPPLMTNLFAVFTKAGTQLYFPGAPMLVAAFLTLIS 391
BLAST of mRNA_F-serratus_M_contig1528.3624.1 vs. uniprot
Match: A0A3D1ELS5_9GAMM (Tetracycline resistance MFS efflux pump n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D1ELS5_9GAMM) HSP 1 Score: 98.6 bits (244), Expect = 4.140e-18 Identity = 112/438 (25.57%), Postives = 181/438 (41.32%), Query Frame = 2
Query: 143 TLCLFLSAITTSILSQVYPKIILLHFEGDDRKASTYRGWLATAVSVTQLVFVPVLCSVSDVVGRRAVIAGAFVLHGAAAFVLSTTPSSLIWATMLDLV-TCLCIVNIPLSQAIMIDIAAGGGKGATHGL-GIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMA-ALLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRPKISNPVSIFTVFLESRLLLQIALSYFLFILSLNVFAVGYNYLDF-RFHWSPLEISYFFATFNALMALVSGLCIRFIVPRHLSEENGAL-FGTCIQGCAGVAYGLCYRGWMLFPALAFGALQNITEPCLQAIMATFVAKDRQGSLQGAVTSLR----IIGEGVAAPIFSHTFSAGCTVRFEQAPFFLAAIFSFVSLTITWWPLREMDKRQRTLDDG 1429
T+ LFL + ++ ++P +++ GD +S G+L T +V QL+F P+L S+SD GRR V+ + +L S +W L V T + + A++ D++ + GL GIA+G L G +GG L A GL++ + LF L +ET PK +QR T K +NPV L + FL+ + +VF +N+ RF WSPL++ A + V G +R+++P+ +E G I GVA L+ +A +L +T P +Q+IM + ++ QG LQG + S+ I+G F++ S + A F AA + +SL I +R+ + R L G
Sbjct: 11 TITLFLDTVGFGLIIPIFPTLLVEITGGDMASSSAMSGYLTTVFAVAQLLFSPLLGSLSDRFGRRPVLITSLFFLSINFLILGLADS--LWLLFLGRVLTGITAATYATASALIADVSPSSERAQNFGLMGIAFG---LGFICGPALGGVLGSWDVRAPFFAAAGLTLLNTMYGLFFL--QETLPK--------------------------EQRRT---FAWKRANPVGAMRQISRYPALSGLIACMFLYAIGHHVFPSNWNFYTIERFAWSPLDVGLSLAFVGVMAVAVQGGLLRWVIPKFGAERVACFGIGATILAYLGVASAASVT--TLYIWIAISSLGGLTGPAVQSIMTNQLPQNEQGELQGVIASVNSLAMILGPLAITQSFTYFTSPTTPIYLPSAAFLFAAAITVISLGIF---VRQASRLNRLLHSG 407
BLAST of mRNA_F-serratus_M_contig1528.3624.1 vs. uniprot
Match: A0A3D5S9N2_9BACT (Tetracycline resistance MFS efflux pump n=3 Tax=Bacteria TaxID=2 RepID=A0A3D5S9N2_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 5.250e-18 Identity = 104/415 (25.06%), Postives = 174/415 (41.93%), Query Frame = 2
Query: 167 ITTSILSQVYPKIILLHFEGDDRKASTYRGWLATAVSVTQLVFVPVLCSVSDVVGRRAVIAGAFVLHGAAAFVLSTTPSSLIWATMLDLVTCLCIVNIPLSQAIMIDIAAGGGKGATHGL-GIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAA-LLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRP---KISNPVSIFTVFLESRLLLQIALSYFLFILSLNVFAVGYNYLDF-RFHWSPLEISYFFATFNALMALVSGLCIRFIVPRHLSEENGALFGTCIQGCAGVAYGLCYRGWMLFPALAFGALQNITEPCLQAIMATFVAKDRQGSLQGAVTSLR----IIGEGVAAPIFSHTFSAGCTVRFEQAPFFLAAIFSFVSLTITW 1381
I I+ V P +I G AS + GWL A ++ Q V P++ ++SD GRR V+ + + G ++L+ +L W + +V + + + A + DI+A + G+ G A+G L VG +IGG L E + GL + L FVL + R RP + +NP + +++ + +S L ++ + + Y +F WS E+ Y A ++ALV G+ +R I+ + + + G G + + GWML+ L A I P LQ +M+ V + QG LQG +TSL ++G + IF + A V APF+LAA+FSF ++ +++
Sbjct: 20 IGVGIIIPVVPALITELTGGSISDASIWGGWLMFAYALMQFVCAPIVGALSDQYGRRPVLLLSLLGFGLD-YILAGFAPTLGWLFLARIVAGITGASFTTANAYIADISAPEKRSQNFGMVGAAFG---LGFIVGPLIGGVLGEYGSRVPFFASAGLVLLNWLYGYFVLPESLSKENR----------------------------------RPFSWRRANPWGTLMQLKKYPMVIGLLVSLVLVYIAAHATQSTWTYFTIEKFDWSEAEVGYSLAFVGFMIALVQGVAVRPIINK-IGQARGVYVGLAFNCLGFILIAMSGTGWMLYLVLIPYAFGGIAGPSLQGLMSNSVPANEQGELQGGLTSLMSLTTVVGPPLMTNIFGYFTDASREVYIPSAPFYLAAVFSFTAMLMSY 395
BLAST of mRNA_F-serratus_M_contig1528.3624.1 vs. uniprot
Match: A4YT38_BRASO (Putative tetracycline-efflux transporter n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A4YT38_BRASO) HSP 1 Score: 97.1 bits (240), Expect = 1.590e-17 Identity = 115/427 (26.93%), Postives = 180/427 (42.15%), Query Frame = 2
Query: 152 LFLSAITTSILSQVYPKIILLHFEGDDRKASTYRGWLATAVSVTQLVFVPVLCSVSDVVGRRAVIA-GAFVLHGAAAFVLSTTPSSLIWATMLDLVTCLCIVNIPLSQAIMIDIAAGGGKGATHG-LGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMA-ALLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRPKISNPVSIFTVFLESRLLLQIALSYFLFILSLNVFAVGYN-YLDFRFHWSPLEISYFFATFNALMALVSGLCIRFIVPRHLSEENGALFGTCIQGCAGVAYGLCYRGWMLFPALAFGALQNITEPCLQAIMATFVAKDRQGSLQGAVTSLRIIGEGVAAPIFSHTFS----AGCTVRFEQAPFFLAAIFSFVSLTITWWPLREMDKR 1408
+ L + ++ + PK+I D +A+ G TA ++ QLVF PVL S+SD GRR VI F L AA +VL SL W + L++ + +I + A + D+ + A G +G A+GA + +G GG L + A GLS A AL L VL A +R A R + +NP+ + R L ++L F+ L+ V + Y +R+ W + A +V G + FIV R L E + G + +GL G + + + AL ++ +QA+M V DRQG LQGA +S++ + + +F+ TF+ AG + APF LA+ V+L I LR +++
Sbjct: 35 ILLDMLALGLIMPILPKLIEGFVGNDTAQAARIFGLFGTAWALMQLVFSPVLGSLSDRFGRRPVILLSNFGL--AADYVLMALAPSLAWLFLGRLISGVTSASISTAFAYISDLTPPDRRAAVFGRIGAAFGAGFV---LGPATGGLLGDIDPRLPFWAAAGLSFANALYGLLVLPESLPAERRSA-------------------------------FRWRAANPLGALRLLRSERTLAGLSLVNFITQLAHVVLPSTFVLYATYRYGWDTRTVGLTLAIVGVCAMVVQGGAVGFIV-RRLGERGALMLGLSAGTVGFLIFGLAPTGMLSWTGIPAMALWGVSGAAIQALMTRLVPPDRQGQLQGATSSVQSMAQLAGPFLFTLTFAYFIGAGAPLHLPGAPFLLASALLIVALVIAVRALRAEERK 424
BLAST of mRNA_F-serratus_M_contig1528.3624.1 vs. uniprot
Match: A0A3D9AML1_9FLAO (Tetracycline resistance MFS efflux pump n=1 Tax=Chryseobacterium pennipullorum TaxID=2258963 RepID=A0A3D9AML1_9FLAO) HSP 1 Score: 94.4 bits (233), Expect = 1.170e-16 Identity = 95/372 (25.54%), Postives = 160/372 (43.01%), Query Frame = 2
Query: 248 YRGWLATAVSVTQLVFVPVLCSVSDVVGRRAVIAGAFVLHGAAAFVLSTTPSSLIWATMLDLVTCLCIVNIPLSQAIMIDIAAGGGKGATHGLGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAALL-SLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRPKISNPVSIFTVFLESRLLLQIALSYFLFILSLNVFAVGYNYLDFRFHWSPLEISYFFATFNALMALVSGLCIRFIVPRHLSEENGALFGTCIQGCAGVAYGLCYRGWMLFPALAFGALQNITEPCLQAIMATFVAKDRQGSLQGAVTSLR----IIGEGVAAPIFSHTFSAGCTVRFEQAPFFLAA 1348
Y GW ++ Q +F PVL +SD GRR V+ + + G +L+ P LIW + ++ + ++ + A + D+ +G G+ A + + +G +IGG L + A GLS LL FVL A KR R K I S+ L L+L AL + + +V + Y+ +F W I Y L+ + G I + + + + ++ + + + + +G+ RGWM+F +AF AL + P LQA++++ V D+QG LQG+++S+ I+G + +F++ +AG V F APF LAA
Sbjct: 49 YMGWFIAVYALMQFLFAPVLGGLSDRYGRRPVLLCSLLGLGIDYLILAMAPD-LIWLFVGRVIVGIMGSSVTTATAYISDVTEPEKRGKNFGMISAIAG--IGMIIGPVIGGVLGQYGERLPFYAAAGLSFLNLLYGFFVLPESLEATKR---------------------------RPFSWKTANPIGGMKSLNKEILAPTLILAFAL---IALAGQSVQSTWNIYVMEKFSWKEDMIGYSMGFLGLLIIVFQGGLIGYFLNK-VGQKKSVIIFLSVYCISLLLFGIANRGWMMFAVIAFYALGGMVSPILQALISSKVPDDKQGLLQGSLSSIMSITSIVGPLLMTSVFAYFTAAGSPVFFSGAPFILAA 386
BLAST of mRNA_F-serratus_M_contig1528.3624.1 vs. uniprot
Match: A0A346YMY6_9HYPH (Tetracycline resistance MFS efflux pump n=2 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A346YMY6_9HYPH) HSP 1 Score: 93.2 bits (230), Expect = 2.760e-16 Identity = 105/423 (24.82%), Postives = 175/423 (41.37%), Query Frame = 2
Query: 152 LFLSAITTSILSQVYPKIILLHFEGDDRK-ASTYRGWLATAVSVTQLVFVPVLCSVSDVVGRRAVIAGA--------FVLHGAAAFVLSTTPSSLIWATMLDLVTCLCIVNIPLSQAIMIDIAAGGGKGATHGL-GIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAALLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRPKISNPVSIFTVFLESRLLLQIALSYFLFILSLNVFAVGYNYLD-FRFHWSPLEISYFFATFNALMALVSGLCIRFIVPRHLSEENGALFGTCIQGCAGVAYGLCYRGWMLFPALAFGALQNITEPCLQAIMATFVAKDRQGSLQGAVTSLRIIGEGVAAPIFSHTFSA----GCTVRFEQAPFFLAAIFSFVSLTI 1375
LFL I +I+ V P L GDD A+ GWL S Q +F P+L ++SD GRR ++ + + A +F + +L + TC A + DI+ + GL GIA+G + G L E L AG LS+A ++ + L P+ + ++ K +NP + + L FL+ L+ V+ ++++ +R++WS +I F A+V G + +VP L E A+ G + Y ++GW+++ + ++N+ +P L++I + V QG LQGA+TSL + + IF+ FSA G V F AP+F+AAIF +++T+
Sbjct: 18 LFLDIIGIAIIMPVLPTF-LRELTGDDVSGAAVDGGWLLLIYSAMQFLFAPLLGNLSDRFGRRPILLASVLTFAVDNLICAAATSFWMLFVGRTLAGISGGSFATC---------SAYIADISTDETRAKNFGLIGIAFG---VGXXXXXXXXGLLGELGPRAPFLAAGLLSLANFIAAWFL-----LPETL-------------------------EKANRRTFELKRANPFGALKQMRHYPGIGWVMLVMFLYWLAHAVYPSVWSFVSAYRYNWSEGQIGLSLGMFGICAAIVMGFVLPKLVP-VLGEWRTAVLGLSFSCLGLLGYAFAWQGWVVYAVILLTTIENVGDPALRSIASAKVPASAQGELQGAITSLTSLTTIIGPAIFTQLFSAFTGEGAAVEFAGAPYFMAAIFMALAITV 396 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1528.3624.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1528.3624.1 >prot_F-serratus_M_contig1528.3624.1 ID=prot_F-serratus_M_contig1528.3624.1|Name=mRNA_F-serratus_M_contig1528.3624.1|organism=Fucus serratus male|type=polypeptide|length=555bp MSEDEVETRLAVNVPQQLIAAAVVRRRLTLCLFLSAITTSILSQVYPKIIback to top mRNA from alignment at F-serratus_M_contig1528:176377..182665+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1528.3624.1 ID=mRNA_F-serratus_M_contig1528.3624.1|Name=mRNA_F-serratus_M_contig1528.3624.1|organism=Fucus serratus male|type=mRNA|length=6289bp|location=Sequence derived from alignment at F-serratus_M_contig1528:176377..182665+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1528:176377..182665+ >mRNA_F-serratus_M_contig1528.3624.1 ID=mRNA_F-serratus_M_contig1528.3624.1|Name=mRNA_F-serratus_M_contig1528.3624.1|organism=Fucus serratus male|type=CDS|length=3330bp|location=Sequence derived from alignment at F-serratus_M_contig1528:176377..182665+ (Fucus serratus male)back to top |