mRNA_F-serratus_M_contig1528.3614.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1528.3614.1 vs. uniprot
Match: D7FNH1_ECTSI (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH1_ECTSI) HSP 1 Score: 420 bits (1079), Expect = 6.840e-144 Identity = 217/248 (87.50%), Postives = 237/248 (95.56%), Query Frame = 1
Query: 1 MASLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKSNKGVHELDGAEKLPHDVIQMLKTQDLGYVSTKRSADERKAAKLRESLHLLDAGPRNKHTVFFDTEEEAKRFDVAEHFDTVPELADRSFNRPRKSTLETAQVLGATTRREMKKVLKKRDASYSELVQRLERAEKIKKAEDHLEAQRKVMNSKGTKRKVKDAQDGQPAVYKWKKERSR 744
M+SLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKK+ GVH LDGAE LPHDV+Q+LKTQDLGYVST RSADERKAAKLRESLH+L+AGPRNKHT+FFD+E+EAK FDVA+HFDTVPELADR+FNRPRK TLE AQV GAT RR++KKVLKKRDASYSEL+QRLERAEK+KKAE HLEAQRKVMNSKGTKRKV++A+DG+PAVY+WKKERSR
Sbjct: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAETLPHDVVQLLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEAKEFDVAKHFDTVPELADRAFNRPRKDTLEKAQVTGATNRRQLKKVLKKRDASYSELMQRLERAEKMKKAEVHLEAQRKVMNSKGTKRKVQEAKDGRPAVYRWKKERSR 248
BLAST of mRNA_F-serratus_M_contig1528.3614.1 vs. uniprot
Match: A0A836CK24_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK24_9STRA) HSP 1 Score: 288 bits (736), Expect = 5.480e-92 Identity = 145/248 (58.47%), Postives = 191/248 (77.02%), Query Frame = 1
Query: 1 MASLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKSNKGVHELDGAEKLPHDVIQMLKTQDLGYVSTKRSADERKAAKLRESLHLLDAGPRNKHTVFFDTEEEAKRFDVAEHFDTVPELADRSFNRPRKSTLETAQVLGATTRREMKKVLKKRDASYSELVQRLERAEKIKKAEDHLEAQRKVMNSKGTKRKVKDAQDGQPAVYKWKKERSR 744
M+SLRNAVKR HKERAQPASR K GLLEKH DYVLRAR+Y KRDR+ AL+LKA+++NPDEFYF MH+ K+ +GVH+++G+ L H+ MLKTQD+ Y+ KR+ D +KA +L+ LH+LDA P+N HTVF + + + FD AE+FDT PELA R+FNRPR +TLE+ QVLGA +R ++KK LK+RDA+Y E+ R ERA K+ +A HL AQR +M ++GT KVK A+ GQP VYKWK++R++
Sbjct: 1 MSSLRNAVKRKTHKERAQPASRSKFGLLEKHSDYVLRARDYNAKRDRLNALRLKASLRNPDEFYFGMHKAKTKEGVHQVEGSSSLDHETAHMLKTQDMAYIHMKRAVDIKKAERLKAGLHMLDAPPQNTHTVFVKNKRQRRAFDAAEYFDTAPELAGRTFNRPRMATLESKQVLGAESRADLKKALKQRDAAYQEVEAREERARKMTRAAAHLAAQRALMTARGTVTKVKGAEKGQPPVYKWKRQRAK 248
BLAST of mRNA_F-serratus_M_contig1528.3614.1 vs. uniprot
Match: A0A8K1CCZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCZ2_PYTOL) HSP 1 Score: 256 bits (653), Expect = 1.660e-79 Identity = 139/248 (56.05%), Postives = 179/248 (72.18%), Query Frame = 1
Query: 7 SLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKSNKGVH--ELDGAEKLPHDVIQMLKTQDLGYVSTKRSADERKAAKLRESLHLLDAGPRNKHTVFFDTEEEAKRFDVAEHFDTVPELADRSFNRPRKSTLETAQVLGATTRREMKKVLKKRDASYSELVQRLERAEKIKKAEDHLEAQRKVMNSKGTKRKVKDAQDGQPAVYKWKKERSR 744
SLRN VKR EHKER Q R+KLGLLEKHKDYVLRAR+Y KK+DR++ +KLKAA +NPDEFYF M+ ++ GVH E + +EKL + +++LKTQDL Y+ KR+ D RKA KL + LH +DA NKHTVF D+ E+ FDVA HFDT PELADR+FNR RK TL+T + T +++++ + K+RDA Y EL RL RA KI++ D L+ +RKV +KG KRKV+D +P VYKWKKER +
Sbjct: 2 SLRNVVKRREHKERGQLQERKKLGLLEKHKDYVLRARDYNKKQDRLRTMKLKAAFRNPDEFYFKMNTTRTEDGVHVSENNHSEKLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLTQGLHFIDAPKNNKHTVFVDSSEDLNTFDVATHFDTAPELADRAFNRLRKETLKTTTIQATTDKKQLRALTKERDAVYRELNDRLIRATKIQQMSDRLDLERKVQ-AKGKKRKVQDGDSSRPPVYKWKKERQK 248
BLAST of mRNA_F-serratus_M_contig1528.3614.1 vs. uniprot
Match: K3WAT9_GLOUD (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAT9_GLOUD) HSP 1 Score: 244 bits (623), Expect = 5.590e-75 Identity = 136/251 (54.18%), Postives = 181/251 (72.11%), Query Frame = 1
Query: 1 MASLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKSNKGVHEL--DGAEKLPHDVIQMLKTQDLGYVSTKRSADERKAAKLRESLHLLDA-GPRNKHTVFFDTEEEAKRFDVAEHFDTVPELADRSFNRPRKSTLETAQVLGATTRREMKKVLKKRDASYSELVQRLERAEKIKKAEDHLEAQRKVMNSKGTKRKVKDAQDGQPAVYKWKKERSR 744
M+SLRN VKR EHKER Q R+KLGLLEKHKDYV RAR+Y KK+D ++AL +KAA +NPDEFYF M+ ++ GVH + ++L + +++LKTQDL Y+ KR+ D RKA KL E LH +DA G NKH VF D+++E + FDVA+HFDTVPE+ADR+FNR RK TL+T + ++ +KK+ +RDA Y EL RL+RA I + L+ +RKV +KG K K+KDA+DGQPAVY+WKK+R +
Sbjct: 1 MSSLRNVVKRREHKERGQLRERKKLGLLEKHKDYVKRARDYNKKQDHLKALAVKAAFRNPDEFYFRMNSTRTEDGVHVSTHNHHKQLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLNEGLHFIDAAGKDNKHVVFVDSKDEVESFDVAKHFDTVPEIADRAFNRLRKDTLKTVSLPAVQDKKTLKKLGIERDAVYRELNDRLQRASTIDRMRAKLDLERKVQ-AKGKKMKIKDAEDGQPAVYRWKKQRQK 250
BLAST of mRNA_F-serratus_M_contig1528.3614.1 vs. uniprot
Match: A0A5D6XJY8_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJY8_9STRA) HSP 1 Score: 240 bits (612), Expect = 2.480e-73 Identity = 133/249 (53.41%), Postives = 174/249 (69.88%), Query Frame = 1
Query: 7 SLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKSNKGVH-----ELDGAEKLPHDVIQMLKTQDLGYVSTKRSADERKAAKLRESLHLLDAGPRNKHTVFFDTEEEAKRFDVAEHFDTVPELADRSFNRPRKSTLETAQVLGATTRREMKKVLKKRDASYSELVQRLERAEKIKKAEDHLEAQRKVMNSKGTKRKVKDAQDGQPAVYKWKKER 738
SLRN VKR EHKER QP R+KLGLLEKHKDYV RAR+Y K+DR++ ++LKAA +NPDEFYF M+ ++ GVH LDG + L D +++LKTQD+ Y+ KR+ D RKA KL LH +DA NKH VF D+E + +FDVA HFDT PELADR+FNR R L+T + ++ +E+KK ++RD Y EL RLERA + + L+ +RKV +KG K K+KDA++GQPAVY+WKK+R
Sbjct: 2 SLRNVVKRREHKERGQPQERKKLGLLEKHKDYVKRARDYNSKQDRLRTMQLKAAFRNPDEFYFRMNATRTEGGVHVSDNNRLDG-KALTADALKVLKTQDVAYLHLKRAVDMRKAEKLNAGLHFIDAPTANKHVVFVDSEAQLAKFDVAAHFDTAPELADRAFNRVRMDALKTLALPAVSSAKEIKKRNRERDGVYRELSDRLERAATLDRMRAKLDLERKVQ-AKGKKMKIKDAENGQPAVYRWKKQR 248
BLAST of mRNA_F-serratus_M_contig1528.3614.1 vs. uniprot
Match: A0A4D9DA46_9STRA (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA46_9STRA) HSP 1 Score: 236 bits (602), Expect = 8.040e-72 Identity = 132/249 (53.01%), Postives = 178/249 (71.49%), Query Frame = 1
Query: 4 ASLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKSNKGVHELDGAE-KLPHDVIQMLKTQDLGYVSTKRSADERKAAKLRESLHLLDAGPRNKHTVFFDTEEEAKRFDVAEHFDTVPELADRSFNRPRKSTLET-AQVLGATTRREMKKVLKKRDASYSELVQRLERAEKIKKAEDHLEAQRKVMNSKGTKRKVKDAQDGQPAVYKWKKERSR 744
ASLRNA+ R +KER+QPA+R+K GLLEKHKDYV RA +Y +K + +L+ KAA +NPDEFYFAM + ++ +GVH + AE LPHD I +LKTQD+ YV+ KR+ D +KA KL+ LH L NKHTVF DTE E + FD A+HF T P L R+FNRP+ TLET VLG E+KKV K R+ +Y+EL +RL+R+ K+ +H++ ++ VM KG KRKV++A+DG+PAV+KWK+ER +
Sbjct: 4 ASLRNAIPRKTNKERSQPAARKKFGLLEKHKDYVQRANDYKRKSKALASLREKAAFRNPDEFYFAMTKGQTKEGVHRVRPAEASLPHDHIALLKTQDMRYVTMKRALDVKKAEKLQAGLHFLTEEAANKHTVFVDTEAEVETFDPAKHFGTDPALVTRAFNRPKLETLETPGAVLGVANVGELKKVRKAREKAYTELGERLKRSLSFKEVLEHMQVEKNVMG-KGRKRKVQEAEDGKPAVFKWKRERRK 251
BLAST of mRNA_F-serratus_M_contig1528.3614.1 vs. uniprot
Match: A0A3R7K0P1_9STRA (U3 small nucleolar RNA-associated protein 11 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K0P1_9STRA) HSP 1 Score: 232 bits (592), Expect = 4.750e-70 Identity = 134/252 (53.17%), Postives = 178/252 (70.63%), Query Frame = 1
Query: 1 MASLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKSNKGVH--ELDGAEKLPHDVIQMLKTQDLGYVSTKRSADERKAAKLRESLHLLDAGPRNKHTVFFDTEEEAKRFDVAEHFDTVPELADRSFNRPRKSTLETAQV--LGATTRREMKKVLKKRDASYSELVQRLERAEKIKKAEDHLEAQRKVMNSKGTKRKVKDAQDGQPAVYKWKKERSR 744
M+SLRN VKR EHKER Q RRKLGLLEKHKDYV RA++Y +K+ ++ L+LKA+M+NPDEFY+ M K+ GVH + A++L + ++ LKTQDL Y+ KR+ D RKA KL LH +D NKHTVF D +++ +FDVAEHFDT PELADR+FNR RK+ LET ++ L A +++ K ++K DA Y EL RLERA+KI + L+ +RKV +KG K KVK A+DG PAVY+WK++R +
Sbjct: 22 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRAKDYNQKQKHLRNLQLKASMRNPDEFYYKMIHGKTEGGVHISTHNHAKQLNAEALRTLKTQDLAYLHMKRAVDLRKAEKLNRGLHFIDTPKNNKHTVFVDEDDDVNKFDVAEHFDTAPELADRAFNRLRKADLETMELPDLAADPKQKYKMQVEK-DAMYRELRDRLERAKKIGRMSAKLDLERKVQ-AKGKKMKVKGAEDGMPAVYRWKQQRQK 271
BLAST of mRNA_F-serratus_M_contig1528.3614.1 vs. uniprot
Match: A0A7S2W8G3_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8G3_9STRA) HSP 1 Score: 231 bits (590), Expect = 6.260e-70 Identity = 127/259 (49.03%), Postives = 181/259 (69.88%), Query Frame = 1
Query: 1 MASLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKSNKGVHEL---DGAEKLPHDVIQMLKTQDLGYVSTKRSADERKAAKLRESLHLLDAGPRNKHTVFFDTEEEAKRFDVAEHFDTVPELADRSFNRPRKSTLE--------TAQVLGATTRREMKKVLKKRDASYSELVQRLERAEKIKKAEDHLEAQRKVMNSKGTKRKVKDAQDGQPAVYKWKKERSR 744
MASLRNA+ R H+ER+Q ASR LGLLEK KDYV RAR++ +K +++ L+ KA +NPDEFYF M +K+ GVH DGA+KL HD I ++K+QDLGY+S K++ D+RK+ +L+ LH+L P N+HTVF D ++ + FD AEHFDT+PELA R+FNRPR+ E + V+ +T+ ++ KK++K +D +Y +L +RLER+EK++K E ++KVM KG KRKV+ + G P VYKWK++R+R
Sbjct: 1 MASLRNALPRRTHRERSQVASRAHLGLLEKKKDYVERARDFQRKTGKIKNLRKKARERNPDEFYFGMVNQKTKDGVHVAERNDGADKLSHDDILLMKSQDLGYLSMKKAVDDRKSERLQSGLHMLLDKPLNQHTVFLDKSKDVETFDAAEHFDTMPELAGRAFNRPRRKAFEADKEGSIASTPVMTSTSSKQYKKIMKSKDKAYEDLAERLERSEKLRKLIQRKEVEKKVMG-KGRKRKVEGSSSGAPPVYKWKRKRAR 258
BLAST of mRNA_F-serratus_M_contig1528.3614.1 vs. uniprot
Match: H3G9P5_PHYRM (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9P5_PHYRM) HSP 1 Score: 230 bits (587), Expect = 1.360e-69 Identity = 132/252 (52.38%), Postives = 175/252 (69.44%), Query Frame = 1
Query: 1 MASLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKSNKGVHEL--DGAEKLPHDVIQMLKTQDLGYVSTKRSADERKAAKLRESLHLLDAGPRNKHTVFFDTEEEAKRFDVAEHFDTVPELADRSFNRPRKSTLETAQV--LGATTRREMKKVLKKRDASYSELVQRLERAEKIKKAEDHLEAQRKVMNSKGTKRKVKDAQDGQPAVYKWKKERSR 744
M+SLRN VKR EHKER Q RRKLGLLEKHKDYV RAR+Y +K+ R+Q LKLKAA++NPDEFY M + +++KGVH + +++ + ++ LKTQDL Y+ KR+ D RKA KL LH +DA NKHTVF D E+ FDVA HFDT PEL DR+FNR RK+ L+T + L A +++ K ++K DA Y EL RL+RA KI + L+ +RKV +KG K KVKD ++G PA+Y+WK++R +
Sbjct: 1 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRARDYNRKQKRLQTLKLKAALRNPDEFYHKMAQTQTDKGVHSSTHNHLQQMDSEALRSLKTQDLAYLHMKRAMDLRKAEKLNRGLHFVDAPKDNKHTVFVDDSEQVDTFDVASHFDTAPELVDRAFNRIRKAELQTITLPDLAANPKQKHKMQVEK-DAMYRELKDRLDRANKIGQMSSKLDLERKVQ-AKGKKVKVKDGENGMPAIYRWKQQRQK 250
BLAST of mRNA_F-serratus_M_contig1528.3614.1 vs. uniprot
Match: A0A0P1B0R4_PLAHL (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0R4_PLAHL) HSP 1 Score: 227 bits (578), Expect = 3.010e-68 Identity = 131/251 (52.19%), Postives = 175/251 (69.72%), Query Frame = 1
Query: 1 MASLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKSNKGVH--ELDGAEKLPHDVIQMLKTQDLGYVSTKRSADERKAAKLRESLHLLDAGPRNKHTVFFDTEEEAKRFDVAEHFDTVPELADRSFNRPRKSTLETAQVLG-ATTRREMKKVLKKRDASYSELVQRLERAEKIKKAEDHLEAQRKVMNSKGTKRKVKDAQDGQPAVYKWKKERSR 744
M+SLRN VKR EHKER Q RRKLGLLEKHKDYV RA++Y K+ R++ L+LKAA++NPDEFY MH K+ GVH + + L + ++ LKTQDL Y+ KR+ D RKA +L LH +DA NKHTVF D +E+ + FDVA++FDTVPELADR+FNR R+ LE ++ A + ++ K+ +RDA Y EL RL RA+KI + L+ +RKV +KG KRKVK A++G PAVY+WK++R +
Sbjct: 1 MSSLRNVVKRREHKERGQLRDRRKLGLLEKHKDYVKRAQDYNSKQKRLKMLQLKAALRNPDEFYHRMHNNKTEGGVHISTHNHLKSLSTEALRTLKTQDLAYLHLKRAVDLRKAERLNRGLHFVDAPKDNKHTVFVDDKEQVENFDVAQYFDTVPELADRAFNRIRRRDLEMVELPDMAASPKQKYKMQVERDALYRELRDRLTRAKKIGQMSAKLDLERKVQ-AKGRKRKVKAAENGMPAVYRWKQQRQK 250 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1528.3614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1528.3614.1 >prot_F-serratus_M_contig1528.3614.1 ID=prot_F-serratus_M_contig1528.3614.1|Name=mRNA_F-serratus_M_contig1528.3614.1|organism=Fucus serratus male|type=polypeptide|length=249bp MASLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQAback to top mRNA from alignment at F-serratus_M_contig1528:119102..122816+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1528.3614.1 ID=mRNA_F-serratus_M_contig1528.3614.1|Name=mRNA_F-serratus_M_contig1528.3614.1|organism=Fucus serratus male|type=mRNA|length=3715bp|location=Sequence derived from alignment at F-serratus_M_contig1528:119102..122816+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1528:119102..122816+ >mRNA_F-serratus_M_contig1528.3614.1 ID=mRNA_F-serratus_M_contig1528.3614.1|Name=mRNA_F-serratus_M_contig1528.3614.1|organism=Fucus serratus male|type=CDS|length=1494bp|location=Sequence derived from alignment at F-serratus_M_contig1528:119102..122816+ (Fucus serratus male)back to top |