mRNA_F-serratus_M_contig1528.3613.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: D7FNH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH0_ECTSI) HSP 1 Score: 471 bits (1213), Expect = 3.600e-163 Identity = 240/291 (82.47%), Postives = 260/291 (89.35%), Query Frame = 1
Query: 100 LLAAVPLLAGSTAGKGSRGPAATQLGRSANRLAKLLPFKNLEEGIPRAVALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDLSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQDAVCVQDSDVATDFHAALDTPAGRRQ 972
L A LLA AGKG+ G A QLG+SA +A P K LEEG+PRAVALA+LEQEIEDLN+MHKFDRRLERLAMVMPLTD FDPGVTHFAHEHLQEGDKIS+P+SILSEL+RKQAEIPWQFELKLVRRK PG++EPVD+ PPR AL G+ EMP LS+VACSILDARSPE FVF+PDWMMKALRL+PRDIVLYRHKDL KASKIVLQPHSSAFLKMSNHQAVMETELRHYSAI RGTT+AFRYRKTLY+FNVLECID DGKSQ+AVCVQDSDVATDF AALDTPAGRR+
Sbjct: 10 LTAVAVLLADPAAGKGAGGITAAQLGKSAAGMAGPSPLKTLEEGLPRAVALAQLEQEIEDLNVMHKFDRRLERLAMVMPLTDQFDPGVTHFAHEHLQEGDKISMPASILSELMRKQAEIPWQFELKLVRRKGPGKFEPVDVPAPPRAALTGRAEMPQLSAVACSILDARSPEQFVFMPDWMMKALRLRPRDIVLYRHKDLTKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDADGKSQEAVCVQDSDVATDFQAALDTPAGRRK 300
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A835Z4C9_9STRA (Ubiquitin fusion degradation protein UFD1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4C9_9STRA) HSP 1 Score: 244 bits (624), Expect = 1.310e-73 Identity = 124/259 (47.88%), Postives = 177/259 (68.34%), Query Frame = 1
Query: 244 VALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDLSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIV-LQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYR----------------------KTLYEFNVLECIDTDGKSQDAVCVQDSDVATDFHAALD 951
V LAELEQE+ED+N+M+K+DR+++RL +VMPLTD F+P V F H HLQ D++S+P S+L E+ ++ E PWQFE++ V R+ PG+Y PV+LS P R+ LAG+ EMP LS V CS LDAR+PE ++F+PDWMMK+LRLKPRDIV R+K+L +++ V LQ HS + + AV+E ELRHYS++ GTTI+F + + + NV++C+D G++ ++VC+QD+DV TD+ LD
Sbjct: 95 VQLAELEQELEDINVMNKYDRKMDRLLLVMPLTDSFEPAVGQFGHGHLQTSDRVSLPQSVLKEVQHRKLEFPWQFEIQRVHRRGPGDYLPVELSMPTRDDLAGRTEMPQLSRVTCSPLDARAPEQYIFIPDWMMKSLRLKPRDIVQLRYKNLPQSTGCVHLQAHSES---AATSHAVLEEELRHYSSLTAGTTISFVFNPQGAELGGAKGAKGKAKKGVGARREVKINVVQCVDAGGRAVESVCIQDADVGTDWLKPLD 350
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A7S2UZC1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZC1_9STRA) HSP 1 Score: 219 bits (558), Expect = 8.750e-65 Identity = 119/260 (45.77%), Postives = 168/260 (64.62%), Query Frame = 1
Query: 238 RAVALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAP-GEYEPVD------------LSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQDAVCVQDSDVATDFHAALDTPAGRRQSV 978
RA+ LA++EQE+ED N M K DR L+R +VMPLT FDP V + AH H+Q GDKIS+P S+ ++++ E PWQFE++++ R E +P D L+ K L + CS+LD R+PE ++F+P WMMK+L L+PRD+V RH L + + LQPH S FLK++NH+AV+E+ELRHYS++ G+TIAFRYRK Y F+V+E + +DGK QDA+CVQD +VA DF LD ++++
Sbjct: 47 RALKLAKVEQEVEDFNSMKKLDRSLDRRYIVMPLTRAFDPPVGNIAHNHIQFGDKISMPKSLFKMIMKQHIEPPWQFEIEVINRVGDCEEKDPEDGDXXXXXXXXXXXXXXXXXXLSTSKLQWPLKKLYCSLLDIRAPENYIFLPGWMMKSLGLRPRDVVRMRHFVLPQGTMAKLQPHHSDFLKLTNHRAVLESELRHYSSLTTGSTIAFRYRKKKYFFDVVEVM-SDGKIQDAICVQDCNVAADFVEPLDVVKKKKKAA 305
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A6V1UP89_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UP89_HETAK) HSP 1 Score: 192 bits (488), Expect = 4.280e-54 Identity = 114/276 (41.30%), Postives = 155/276 (56.16%), Query Frame = 1
Query: 238 RAVALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDL-------------------------------------SPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQDAVCVQDSDVATDFHAALDT 954
RAV A++EQ +ED N + K D L R ++MP+ + FDP F+ H+Q GDK+S+P SI S + R+ PW FE++++ +P E + + S P R KKE L V SILD +PE ++F PDWM+KALRL+PRD+V R L K I L+PHSS FLK+SNHQAVMETEL+HYS + G T+ +YR T+YE +V E + +DGK A+C++D+DVATDF LDT
Sbjct: 27 RAVYRAKVEQAVEDHNALSKLDNNLNRRCIIMPMNEGFDPPPGSFSRGHIQMGDKMSIPRSIFSHIQREDIGYPWLFEIEVLH--SPEEQDELKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGPKRGGARKKKE---LQRVYGSILDYAAPENYIFAPDWMLKALRLRPRDVVEVRLAALPKGGLIKLRPHSSDFLKLSNHQAVMETELKHYSCLTEGATVKIKYRDTVYELDVEELL-SDGKPVGALCIEDTDVATDFLPPLDT 296
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A0G4FQT5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FQT5_VITBC) HSP 1 Score: 184 bits (468), Expect = 1.340e-50 Identity = 104/250 (41.60%), Postives = 148/250 (59.20%), Query Frame = 1
Query: 262 EQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPV------------------DLSPPPREALAGKKEMPM--LSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQDAVCVQDSDVATDFHAALD 951
EQ +ED+NI+ K + R R VMP+++ F+P HF+H+H+ GDK+S P +I ++L+ + EIPWQF L+ + RK E E V + + G++ L V CS LD R+PE FVFVPDWMM AL L PRD++ L + + + QPH+SAFLKMSNHQAV+E ELRHYS++ G+TI +Y + + +V+E + + ++ D VCVQD DV+TDF A D
Sbjct: 98 EQLVEDINILEKAEGRHGRFLTVMPISEKFNPPPGHFSHDHVMYGDKVSFPRTISTQLLERNLEIPWQFVLEKIDRK---ELEKVWGGTATTTTXXXXXXXXXXXXXXXGDRIGGRQRYYKSGLKRVYCSTLDFRAPENFVFVPDWMMAALNLMPRDLLYCEFVRLPEGTTVTFQPHNSAFLKMSNHQAVLERELRHYSSLTAGSTIVIKYNRRNFLIDVVE-VKSGSEAYDGVCVQDCDVSTDFIAPKD 343
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A8J2T1B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1B5_9STRA) HSP 1 Score: 166 bits (421), Expect = 8.110e-42 Identity = 106/279 (37.99%), Postives = 152/279 (54.48%), Query Frame = 1
Query: 229 GIPRAVALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGE------YEPV---------DLSPPPR----EAL-AGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQDA--------VCVQDSDVATDFHA-ALDTPAGRRQSV 978
G+ +A A LEQ +ED N + K R +V+PLT FDP H +Q D++S +S+ EL R+ E+PW F+L+ + R E +E V L+ P + +AL +G +P L V CS LD R+PE F+FVP WM++ALR KP D+V LN I LQPH AFLK++N ++V+E EL++YS+ RG+TI+ Y Y+F+V +C+ DG DA V +QD+DV+ D A LD P ++Q V
Sbjct: 376 GLEQAARRARLEQRVEDYNALQKASGTFHRAVLVLPLTPEFDPPRGQPGHGRVQFSDRVSASASVGKELTRRALEVPWHFKLEPLARNDDEELVEELGFEEVRPTRILGKDPLNRPLKARNGDALGSGIGVVPPLKRVFCSPLDFRAPENFLFVPLWMLRALRAKPYDVVFMTWVKLNDGVTIELQPHQDAFLKLANPRSVLENELKYYSSATRGSTISLLYEGKQYDFDVTDCVGRDGTQLDAYNPERCEGVAIQDADVSLDLAAHGLDKPPQKQQKV 654
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A7S3Q209_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q209_9STRA) HSP 1 Score: 154 bits (390), Expect = 3.730e-40 Identity = 101/257 (39.30%), Postives = 138/257 (53.70%), Query Frame = 1
Query: 208 PFKNLEEGIPRAVALAELEQEIEDLNIMHKFDRRLE-------RLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDLSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRH-KDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTD-GKSQDAVCVQDSDVATDFHAALD 951
P K L A LA LEQ +ED N + R +V+PL D FDP V F+H H Q GDK+S+P S + + A++PW FE+ V D PR L E P LS V +D RSP+ +VF+P WMM+AL LKPRD+V + + + S + L+PH+S F+ + NHQAV+ETEL+HYSA+ RG+TI F Y Y F+V++ + G+ VQD D+A +F A D
Sbjct: 45 PVKALMTKWNNANNLAVLEQAVEDYNAEEIVASAPDAASAISYRRLIVLPLDDRFDPPVGVFSHGHTQTGDKMSLPRVFWSAIQKTNADVPWLFEVSRV-----------DGVTGPRVILPPNMEDPKLSKVVGGAIDFRSPDNYVFLPRWMMQALALKPRDVVDVKLIQTVPAGSAVKLRPHASEFVNIGNHQAVLETELKHYSALTRGSTIPFDYLGKRYYFDVVDLRSSPRGEKVPMAKVQDCDIAAEFIRAKD 290
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A0P0YV10_9STRA (Symbiotic ubiquitin fusion degradation n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 RepID=A0A0P0YV10_9STRA) HSP 1 Score: 154 bits (390), Expect = 4.910e-40 Identity = 104/254 (40.94%), Postives = 146/254 (57.48%), Query Frame = 1
Query: 220 LEEGIPRAVALAELEQEIEDLNIM------HKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDLSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIV-LQPHSSAFLK-MSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTD-GKSQDAVCVQDSDVATDFHAALDT 954
LEE +A LA LEQEIED N + +R + +PL D FDP + F+H H+Q GDK+S+P + +AE+PW F ++ V K+ GE + +S E + G ++ LS V LD R+P +VF+P WMM+AL L+PRD+V A + L+PHSS++ K +SN QAV+ETELRHYS++ +G+TIAF Y Y F+V + G+ A+ VQD D+ATDF A DT
Sbjct: 49 LEERFEQAQKLAALEQEIEDHNAAWVASSSDMAESTSKRRLICLPLDDRFDPPMGVFSHGHVQTGDKMSLPRVFFQAIQANKAEVPWLFTVRRVE-KSTGEGDEEVVSSY-NERVVGPEQAGSLSQVIGGPLDFRAPPNYVFLPHWMMRALGLQPRDVVDVEITFSVPAGSLARLRPHSSSWSKEISNPQAVLETELRHYSSLTKGSTIAFDYNSKRYWFDVEDLRSAPRGERCSAIRVQDCDIATDFLPAKDT 300
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A7S2R952_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R952_9STRA) HSP 1 Score: 155 bits (392), Expect = 5.300e-40 Identity = 98/298 (32.89%), Postives = 162/298 (54.36%), Query Frame = 1
Query: 181 SANRLAKLLPFKNLEEGIPRAVALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVD-LSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQ-DAVCVQDSDVATDFHAALDTPAGRR-QSVPTSLGNGGNTGAVDEDAGVEGYDEEDDEE 1065
+++RL+ + E+ I A+A A EQEIED N + + L R + +PLT+HFDP H LQ D++S+P +++ +++++ E PWQFE++ +R + + D RE + L + C +LD ++P +VF+P WMM+ L LK RD+V + L + +I L+P + F+ +N QAVME+EL++YS++ G+TI Y+ + + V+ TDG Q D +QD ++A DF PA ++ +S LG N AV++ EG + D+E
Sbjct: 39 ASSRLSGSRVLRTREQKIEDALARARQEQEIEDYNSFQRCEGSLHRRMICLPLTEHFDPPPGIQGHGKLQVSDRVSLPKELMTGVLKRKPEPPWQFEVRAIRDQDEDDARGTDDAEEGGRERKSYSHTEKQLDKLYCHVLDWQAPRNYVFIPRWMMQTLGLKARDVVEFTWVRLREGGQITLKPLTRDFVNWANPQAVMESELKYYSSLTVGSTILIDYKGSKHALEVVRV--TDGDQQLDGANIQDVNIAVDFEGV---PASKKPKSTSPGLGARDNAAAVEDGVAAEGTRRDGDDE 331
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A7S2EXW9_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXW9_TRICV) HSP 1 Score: 154 bits (388), Expect = 5.650e-40 Identity = 100/256 (39.06%), Postives = 140/256 (54.69%), Query Frame = 1
Query: 211 FKNLEEGIPRAVALAELEQEIEDLN-----IMHKFDRRLE-RLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDLSPPPREALAGK-KEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKD-LNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTD-GKSQDAVCVQDSDVATDFHAALD 951
FK +E A LA LEQ +ED N + L R +V+PL + FDP F+H H+Q GDK+S+P + + + + +AE+PW FE+ V D + PR + + E P L V +D RSP +VF+P WMM AL LKPRD+V R + + S + L+PHSS F+K+ NHQAV+ETEL+HYSA+ +G TI F Y Y F+V++ G+ VQD D+A +F A D
Sbjct: 38 FKAIEAKWSSARDLALLEQAVEDYNAEIVAVAPDVASALSYRRLIVLPLDERFDPPTGVFSHGHVQTGDKMSLPKNFWAAIAKTKAEVPWLFEVSRV-----------DGATGPRAVMPARGAEDPGLDKVVGGAIDFRSPSNYVFLPRWMMIALALKPRDVVDVRLVETVPPGSAVKLRPHSSEFVKIGNHQAVLETELKHYSALTKGATIPFDYNNKRYYFDVVDLRSAPRGEKVPMAKVQDCDIAAEFVRAKD 282 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1528.3613.1 >prot_F-serratus_M_contig1528.3613.1 ID=prot_F-serratus_M_contig1528.3613.1|Name=mRNA_F-serratus_M_contig1528.3613.1|organism=Fucus serratus male|type=polypeptide|length=332bp MLLAAVPLLAGSTAGKGSRGPAATQLGRSANRLAKLLPFKNLEEGIPRAVback to top mRNA from alignment at F-serratus_M_contig1528:115167..118692- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1528.3613.1 ID=mRNA_F-serratus_M_contig1528.3613.1|Name=mRNA_F-serratus_M_contig1528.3613.1|organism=Fucus serratus male|type=mRNA|length=3526bp|location=Sequence derived from alignment at F-serratus_M_contig1528:115167..118692- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1528:115167..118692- >mRNA_F-serratus_M_contig1528.3613.1 ID=mRNA_F-serratus_M_contig1528.3613.1|Name=mRNA_F-serratus_M_contig1528.3613.1|organism=Fucus serratus male|type=CDS|length=1992bp|location=Sequence derived from alignment at F-serratus_M_contig1528:115167..118692- (Fucus serratus male)back to top |