mRNA_F-serratus_M_contig1528.3613.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1528.3613.1
Unique NamemRNA_F-serratus_M_contig1528.3613.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: D7FNH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH0_ECTSI)

HSP 1 Score: 471 bits (1213), Expect = 3.600e-163
Identity = 240/291 (82.47%), Postives = 260/291 (89.35%), Query Frame = 1
Query:  100 LLAAVPLLAGSTAGKGSRGPAATQLGRSANRLAKLLPFKNLEEGIPRAVALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDLSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQDAVCVQDSDVATDFHAALDTPAGRRQ 972
            L A   LLA   AGKG+ G  A QLG+SA  +A   P K LEEG+PRAVALA+LEQEIEDLN+MHKFDRRLERLAMVMPLTD FDPGVTHFAHEHLQEGDKIS+P+SILSEL+RKQAEIPWQFELKLVRRK PG++EPVD+  PPR AL G+ EMP LS+VACSILDARSPE FVF+PDWMMKALRL+PRDIVLYRHKDL KASKIVLQPHSSAFLKMSNHQAVMETELRHYSAI RGTT+AFRYRKTLY+FNVLECID DGKSQ+AVCVQDSDVATDF AALDTPAGRR+
Sbjct:   10 LTAVAVLLADPAAGKGAGGITAAQLGKSAAGMAGPSPLKTLEEGLPRAVALAQLEQEIEDLNVMHKFDRRLERLAMVMPLTDQFDPGVTHFAHEHLQEGDKISMPASILSELMRKQAEIPWQFELKLVRRKGPGKFEPVDVPAPPRAALTGRAEMPQLSAVACSILDARSPEQFVFMPDWMMKALRLRPRDIVLYRHKDLTKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDADGKSQEAVCVQDSDVATDFQAALDTPAGRRK 300          
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A835Z4C9_9STRA (Ubiquitin fusion degradation protein UFD1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4C9_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.310e-73
Identity = 124/259 (47.88%), Postives = 177/259 (68.34%), Query Frame = 1
Query:  244 VALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDLSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIV-LQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYR----------------------KTLYEFNVLECIDTDGKSQDAVCVQDSDVATDFHAALD 951
            V LAELEQE+ED+N+M+K+DR+++RL +VMPLTD F+P V  F H HLQ  D++S+P S+L E+  ++ E PWQFE++ V R+ PG+Y PV+LS P R+ LAG+ EMP LS V CS LDAR+PE ++F+PDWMMK+LRLKPRDIV  R+K+L +++  V LQ HS +    +   AV+E ELRHYS++  GTTI+F +                       +   + NV++C+D  G++ ++VC+QD+DV TD+   LD
Sbjct:   95 VQLAELEQELEDINVMNKYDRKMDRLLLVMPLTDSFEPAVGQFGHGHLQTSDRVSLPQSVLKEVQHRKLEFPWQFEIQRVHRRGPGDYLPVELSMPTRDDLAGRTEMPQLSRVTCSPLDARAPEQYIFIPDWMMKSLRLKPRDIVQLRYKNLPQSTGCVHLQAHSES---AATSHAVLEEELRHYSSLTAGTTISFVFNPQGAELGGAKGAKGKAKKGVGARREVKINVVQCVDAGGRAVESVCIQDADVGTDWLKPLD 350          
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A7S2UZC1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZC1_9STRA)

HSP 1 Score: 219 bits (558), Expect = 8.750e-65
Identity = 119/260 (45.77%), Postives = 168/260 (64.62%), Query Frame = 1
Query:  238 RAVALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAP-GEYEPVD------------LSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQDAVCVQDSDVATDFHAALDTPAGRRQSV 978
            RA+ LA++EQE+ED N M K DR L+R  +VMPLT  FDP V + AH H+Q GDKIS+P S+   ++++  E PWQFE++++ R     E +P D                    L+  K    L  + CS+LD R+PE ++F+P WMMK+L L+PRD+V  RH  L + +   LQPH S FLK++NH+AV+E+ELRHYS++  G+TIAFRYRK  Y F+V+E + +DGK QDA+CVQD +VA DF   LD    ++++ 
Sbjct:   47 RALKLAKVEQEVEDFNSMKKLDRSLDRRYIVMPLTRAFDPPVGNIAHNHIQFGDKISMPKSLFKMIMKQHIEPPWQFEIEVINRVGDCEEKDPEDGDXXXXXXXXXXXXXXXXXXLSTSKLQWPLKKLYCSLLDIRAPENYIFLPGWMMKSLGLRPRDVVRMRHFVLPQGTMAKLQPHHSDFLKLTNHRAVLESELRHYSSLTTGSTIAFRYRKKKYFFDVVEVM-SDGKIQDAICVQDCNVAADFVEPLDVVKKKKKAA 305          
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A6V1UP89_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UP89_HETAK)

HSP 1 Score: 192 bits (488), Expect = 4.280e-54
Identity = 114/276 (41.30%), Postives = 155/276 (56.16%), Query Frame = 1
Query:  238 RAVALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDL-------------------------------------SPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQDAVCVQDSDVATDFHAALDT 954
            RAV  A++EQ +ED N + K D  L R  ++MP+ + FDP    F+  H+Q GDK+S+P SI S + R+    PW FE++++   +P E + +                                       S P R     KKE   L  V  SILD  +PE ++F PDWM+KALRL+PRD+V  R   L K   I L+PHSS FLK+SNHQAVMETEL+HYS +  G T+  +YR T+YE +V E + +DGK   A+C++D+DVATDF   LDT
Sbjct:   27 RAVYRAKVEQAVEDHNALSKLDNNLNRRCIIMPMNEGFDPPPGSFSRGHIQMGDKMSIPRSIFSHIQREDIGYPWLFEIEVLH--SPEEQDELKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGPKRGGARKKKE---LQRVYGSILDYAAPENYIFAPDWMLKALRLRPRDVVEVRLAALPKGGLIKLRPHSSDFLKLSNHQAVMETELKHYSCLTEGATVKIKYRDTVYELDVEELL-SDGKPVGALCIEDTDVATDFLPPLDT 296          
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A0G4FQT5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FQT5_VITBC)

HSP 1 Score: 184 bits (468), Expect = 1.340e-50
Identity = 104/250 (41.60%), Postives = 148/250 (59.20%), Query Frame = 1
Query:  262 EQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPV------------------DLSPPPREALAGKKEMPM--LSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQDAVCVQDSDVATDFHAALD 951
            EQ +ED+NI+ K + R  R   VMP+++ F+P   HF+H+H+  GDK+S P +I ++L+ +  EIPWQF L+ + RK   E E V                         + + G++      L  V CS LD R+PE FVFVPDWMM AL L PRD++      L + + +  QPH+SAFLKMSNHQAV+E ELRHYS++  G+TI  +Y +  +  +V+E + +  ++ D VCVQD DV+TDF A  D
Sbjct:   98 EQLVEDINILEKAEGRHGRFLTVMPISEKFNPPPGHFSHDHVMYGDKVSFPRTISTQLLERNLEIPWQFVLEKIDRK---ELEKVWGGTATTTTXXXXXXXXXXXXXXXGDRIGGRQRYYKSGLKRVYCSTLDFRAPENFVFVPDWMMAALNLMPRDLLYCEFVRLPEGTTVTFQPHNSAFLKMSNHQAVLERELRHYSSLTAGSTIVIKYNRRNFLIDVVE-VKSGSEAYDGVCVQDCDVSTDFIAPKD 343          
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A8J2T1B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1B5_9STRA)

HSP 1 Score: 166 bits (421), Expect = 8.110e-42
Identity = 106/279 (37.99%), Postives = 152/279 (54.48%), Query Frame = 1
Query:  229 GIPRAVALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGE------YEPV---------DLSPPPR----EAL-AGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQDA--------VCVQDSDVATDFHA-ALDTPAGRRQSV 978
            G+ +A   A LEQ +ED N + K      R  +V+PLT  FDP      H  +Q  D++S  +S+  EL R+  E+PW F+L+ + R    E      +E V          L+ P +    +AL +G   +P L  V CS LD R+PE F+FVP WM++ALR KP D+V      LN    I LQPH  AFLK++N ++V+E EL++YS+  RG+TI+  Y    Y+F+V +C+  DG   DA        V +QD+DV+ D  A  LD P  ++Q V
Sbjct:  376 GLEQAARRARLEQRVEDYNALQKASGTFHRAVLVLPLTPEFDPPRGQPGHGRVQFSDRVSASASVGKELTRRALEVPWHFKLEPLARNDDEELVEELGFEEVRPTRILGKDPLNRPLKARNGDALGSGIGVVPPLKRVFCSPLDFRAPENFLFVPLWMLRALRAKPYDVVFMTWVKLNDGVTIELQPHQDAFLKLANPRSVLENELKYYSSATRGSTISLLYEGKQYDFDVTDCVGRDGTQLDAYNPERCEGVAIQDADVSLDLAAHGLDKPPQKQQKV 654          
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A7S3Q209_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q209_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.730e-40
Identity = 101/257 (39.30%), Postives = 138/257 (53.70%), Query Frame = 1
Query:  208 PFKNLEEGIPRAVALAELEQEIEDLNIMHKFDRRLE-------RLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDLSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRH-KDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTD-GKSQDAVCVQDSDVATDFHAALD 951
            P K L      A  LA LEQ +ED N         +       R  +V+PL D FDP V  F+H H Q GDK+S+P    S + +  A++PW FE+  V           D    PR  L    E P LS V    +D RSP+ +VF+P WMM+AL LKPRD+V  +  + +   S + L+PH+S F+ + NHQAV+ETEL+HYSA+ RG+TI F Y    Y F+V++   +  G+      VQD D+A +F  A D
Sbjct:   45 PVKALMTKWNNANNLAVLEQAVEDYNAEEIVASAPDAASAISYRRLIVLPLDDRFDPPVGVFSHGHTQTGDKMSLPRVFWSAIQKTNADVPWLFEVSRV-----------DGVTGPRVILPPNMEDPKLSKVVGGAIDFRSPDNYVFLPRWMMQALALKPRDVVDVKLIQTVPAGSAVKLRPHASEFVNIGNHQAVLETELKHYSALTRGSTIPFDYLGKRYYFDVVDLRSSPRGEKVPMAKVQDCDIAAEFIRAKD 290          
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A0P0YV10_9STRA (Symbiotic ubiquitin fusion degradation n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 RepID=A0A0P0YV10_9STRA)

HSP 1 Score: 154 bits (390), Expect = 4.910e-40
Identity = 104/254 (40.94%), Postives = 146/254 (57.48%), Query Frame = 1
Query:  220 LEEGIPRAVALAELEQEIEDLNIM------HKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDLSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIV-LQPHSSAFLK-MSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTD-GKSQDAVCVQDSDVATDFHAALDT 954
            LEE   +A  LA LEQEIED N           +   +R  + +PL D FDP +  F+H H+Q GDK+S+P      +   +AE+PW F ++ V  K+ GE +   +S    E + G ++   LS V    LD R+P  +VF+P WMM+AL L+PRD+V         A  +  L+PHSS++ K +SN QAV+ETELRHYS++ +G+TIAF Y    Y F+V +      G+   A+ VQD D+ATDF  A DT
Sbjct:   49 LEERFEQAQKLAALEQEIEDHNAAWVASSSDMAESTSKRRLICLPLDDRFDPPMGVFSHGHVQTGDKMSLPRVFFQAIQANKAEVPWLFTVRRVE-KSTGEGDEEVVSSY-NERVVGPEQAGSLSQVIGGPLDFRAPPNYVFLPHWMMRALGLQPRDVVDVEITFSVPAGSLARLRPHSSSWSKEISNPQAVLETELRHYSSLTKGSTIAFDYNSKRYWFDVEDLRSAPRGERCSAIRVQDCDIATDFLPAKDT 300          
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A7S2R952_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R952_9STRA)

HSP 1 Score: 155 bits (392), Expect = 5.300e-40
Identity = 98/298 (32.89%), Postives = 162/298 (54.36%), Query Frame = 1
Query:  181 SANRLAKLLPFKNLEEGIPRAVALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVD-LSPPPREALAGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKDLNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTDGKSQ-DAVCVQDSDVATDFHAALDTPAGRR-QSVPTSLGNGGNTGAVDEDAGVEGYDEEDDEE 1065
            +++RL+     +  E+ I  A+A A  EQEIED N   + +  L R  + +PLT+HFDP      H  LQ  D++S+P  +++ +++++ E PWQFE++ +R +   +    D      RE  +       L  + C +LD ++P  +VF+P WMM+ L LK RD+V +    L +  +I L+P +  F+  +N QAVME+EL++YS++  G+TI   Y+ + +   V+    TDG  Q D   +QD ++A DF      PA ++ +S    LG   N  AV++    EG   + D+E
Sbjct:   39 ASSRLSGSRVLRTREQKIEDALARARQEQEIEDYNSFQRCEGSLHRRMICLPLTEHFDPPPGIQGHGKLQVSDRVSLPKELMTGVLKRKPEPPWQFEVRAIRDQDEDDARGTDDAEEGGRERKSYSHTEKQLDKLYCHVLDWQAPRNYVFIPRWMMQTLGLKARDVVEFTWVRLREGGQITLKPLTRDFVNWANPQAVMESELKYYSSLTVGSTILIDYKGSKHALEVVRV--TDGDQQLDGANIQDVNIAVDFEGV---PASKKPKSTSPGLGARDNAAAVEDGVAAEGTRRDGDDE 331          
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Match: A0A7S2EXW9_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXW9_TRICV)

HSP 1 Score: 154 bits (388), Expect = 5.650e-40
Identity = 100/256 (39.06%), Postives = 140/256 (54.69%), Query Frame = 1
Query:  211 FKNLEEGIPRAVALAELEQEIEDLN-----IMHKFDRRLE-RLAMVMPLTDHFDPGVTHFAHEHLQEGDKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDLSPPPREALAGK-KEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKD-LNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTLYEFNVLECIDTD-GKSQDAVCVQDSDVATDFHAALD 951
            FK +E     A  LA LEQ +ED N     +       L  R  +V+PL + FDP    F+H H+Q GDK+S+P +  + + + +AE+PW FE+  V           D +  PR  +  +  E P L  V    +D RSP  +VF+P WMM AL LKPRD+V  R  + +   S + L+PHSS F+K+ NHQAV+ETEL+HYSA+ +G TI F Y    Y F+V++      G+      VQD D+A +F  A D
Sbjct:   38 FKAIEAKWSSARDLALLEQAVEDYNAEIVAVAPDVASALSYRRLIVLPLDERFDPPTGVFSHGHVQTGDKMSLPKNFWAAIAKTKAEVPWLFEVSRV-----------DGATGPRAVMPARGAEDPGLDKVVGGAIDFRSPSNYVFLPRWMMIALALKPRDVVDVRLVETVPPGSAVKLRPHSSEFVKIGNHQAVLETELKHYSALTKGATIPFDYNNKRYYFDVVDLRSAPRGEKVPMAKVQDCDIAAEFVRAKD 282          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1528.3613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNH0_ECTSI3.600e-16382.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z4C9_9STRA1.310e-7347.88Ubiquitin fusion degradation protein UFD1-domain-c... [more]
A0A7S2UZC1_9STRA8.750e-6545.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1UP89_HETAK4.280e-5441.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4FQT5_VITBC1.340e-5041.60Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A8J2T1B5_9STRA8.110e-4237.99Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3Q209_9STRA3.730e-4039.30Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A0P0YV10_9STRA4.910e-4040.94Symbiotic ubiquitin fusion degradation n=1 Tax=Nit... [more]
A0A7S2R952_9STRA5.300e-4032.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2EXW9_TRICV5.650e-4039.06Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1528contigF-serratus_M_contig1528:115167..118692 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score475.7
Seed ortholog evalue1.8e-131
Seed eggNOG ortholog2880.D7FNH0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ER-associated misfolded protein catabolic process
EggNOG OGsCOG5140@1,KOG1816@2759
Ec32 ortholog descriptionUbiquitin fusion degradation protein UFD1
Ec32 orthologEc-01_005490.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1277
Cds size996
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1528.3613.1prot_F-serratus_M_contig1528.3613.1Fucus serratus malepolypeptideF-serratus_M_contig1528 115352..118596 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929514.5361438-UTR-F-serratus_M_contig1528:115166..1153511622929514.5361438-UTR-F-serratus_M_contig1528:115166..115351Fucus serratus maleUTRF-serratus_M_contig1528 115167..115351 -
1690962887.505874-UTR-F-serratus_M_contig1528:115166..1153511690962887.505874-UTR-F-serratus_M_contig1528:115166..115351Fucus serratus maleUTRF-serratus_M_contig1528 115167..115351 -
1622929514.6740735-UTR-F-serratus_M_contig1528:118596..1186921622929514.6740735-UTR-F-serratus_M_contig1528:118596..118692Fucus serratus maleUTRF-serratus_M_contig1528 118597..118692 -
1690962887.5970116-UTR-F-serratus_M_contig1528:118596..1186921690962887.5970116-UTR-F-serratus_M_contig1528:118596..118692Fucus serratus maleUTRF-serratus_M_contig1528 118597..118692 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929514.5504603-CDS-F-serratus_M_contig1528:115351..1155311622929514.5504603-CDS-F-serratus_M_contig1528:115351..115531Fucus serratus maleCDSF-serratus_M_contig1528 115352..115531 -
1690962887.518927-CDS-F-serratus_M_contig1528:115351..1155311690962887.518927-CDS-F-serratus_M_contig1528:115351..115531Fucus serratus maleCDSF-serratus_M_contig1528 115352..115531 -
1622929514.5636954-CDS-F-serratus_M_contig1528:115830..1159311622929514.5636954-CDS-F-serratus_M_contig1528:115830..115931Fucus serratus maleCDSF-serratus_M_contig1528 115831..115931 -
1690962887.5284421-CDS-F-serratus_M_contig1528:115830..1159311690962887.5284421-CDS-F-serratus_M_contig1528:115830..115931Fucus serratus maleCDSF-serratus_M_contig1528 115831..115931 -
1622929514.5760705-CDS-F-serratus_M_contig1528:116164..1163071622929514.5760705-CDS-F-serratus_M_contig1528:116164..116307Fucus serratus maleCDSF-serratus_M_contig1528 116165..116307 -
1690962887.5364025-CDS-F-serratus_M_contig1528:116164..1163071690962887.5364025-CDS-F-serratus_M_contig1528:116164..116307Fucus serratus maleCDSF-serratus_M_contig1528 116165..116307 -
1622929514.587633-CDS-F-serratus_M_contig1528:116521..1166491622929514.587633-CDS-F-serratus_M_contig1528:116521..116649Fucus serratus maleCDSF-serratus_M_contig1528 116522..116649 -
1690962887.5447898-CDS-F-serratus_M_contig1528:116521..1166491690962887.5447898-CDS-F-serratus_M_contig1528:116521..116649Fucus serratus maleCDSF-serratus_M_contig1528 116522..116649 -
1622929514.5992897-CDS-F-serratus_M_contig1528:116820..1169701622929514.5992897-CDS-F-serratus_M_contig1528:116820..116970Fucus serratus maleCDSF-serratus_M_contig1528 116821..116970 -
1690962887.5544972-CDS-F-serratus_M_contig1528:116820..1169701690962887.5544972-CDS-F-serratus_M_contig1528:116820..116970Fucus serratus maleCDSF-serratus_M_contig1528 116821..116970 -
1622929514.6170058-CDS-F-serratus_M_contig1528:117216..1173391622929514.6170058-CDS-F-serratus_M_contig1528:117216..117339Fucus serratus maleCDSF-serratus_M_contig1528 117217..117339 -
1690962887.564711-CDS-F-serratus_M_contig1528:117216..1173391690962887.564711-CDS-F-serratus_M_contig1528:117216..117339Fucus serratus maleCDSF-serratus_M_contig1528 117217..117339 -
1622929514.6481743-CDS-F-serratus_M_contig1528:117636..1177591622929514.6481743-CDS-F-serratus_M_contig1528:117636..117759Fucus serratus maleCDSF-serratus_M_contig1528 117637..117759 -
1690962887.5742352-CDS-F-serratus_M_contig1528:117636..1177591690962887.5742352-CDS-F-serratus_M_contig1528:117636..117759Fucus serratus maleCDSF-serratus_M_contig1528 117637..117759 -
1622929514.662092-CDS-F-serratus_M_contig1528:118548..1185961622929514.662092-CDS-F-serratus_M_contig1528:118548..118596Fucus serratus maleCDSF-serratus_M_contig1528 118549..118596 -
1690962887.5838234-CDS-F-serratus_M_contig1528:118548..1185961690962887.5838234-CDS-F-serratus_M_contig1528:118548..118596Fucus serratus maleCDSF-serratus_M_contig1528 118549..118596 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1528.3613.1

>prot_F-serratus_M_contig1528.3613.1 ID=prot_F-serratus_M_contig1528.3613.1|Name=mRNA_F-serratus_M_contig1528.3613.1|organism=Fucus serratus male|type=polypeptide|length=332bp
MLLAAVPLLAGSTAGKGSRGPAATQLGRSANRLAKLLPFKNLEEGIPRAV
ALAELEQEIEDLNIMHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEG
DKISVPSSILSELIRKQAEIPWQFELKLVRRKAPGEYEPVDLSPPPREAL
AGKKEMPMLSSVACSILDARSPETFVFVPDWMMKALRLKPRDIVLYRHKD
LNKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAIARGTTIAFRYRKTL
YEFNVLECIDTDGKSQDAVCVQDSDVATDFHAALDTPAGRRQSVPTSLGN
GGNTGAVDEDAGVEGYDEEDDEEQGWGSDEF*
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mRNA from alignment at F-serratus_M_contig1528:115167..118692-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1528.3613.1 ID=mRNA_F-serratus_M_contig1528.3613.1|Name=mRNA_F-serratus_M_contig1528.3613.1|organism=Fucus serratus male|type=mRNA|length=3526bp|location=Sequence derived from alignment at F-serratus_M_contig1528:115167..118692- (Fucus serratus male)
CCTGTTTATTCGTGCGCCACAAGTCCGAGCGGAAGTCGATATCAAAATAA GCGGCGATATCGTGGAGCATGGGTTAGGGCGGTGACGGGAGTGTTAATGC TGCTGGCTGCTGTTCCCCTCCTTGCTGGATCTACCGCAGGAAAGGTGAGA AACCCTCGCCCTTTGTACTCCAGCACACGTTTTTGTAGTATTTTAATCAA CTGACGGTTGTGTACAAATGGACACTAATAATGAGATTCAAAGCACATCA CCACCGCAGAAGGAAGGTGGAGAAATCATGTGTGGCCTTCCTCCTGTGTA ACCCCGGCCGGTACGTCCACAAACCTGACCTGCAGAATAGATGGGATGGC TACACACACACTTCCTGCGATGTCGAGGTCGTGGCATAGAGGTGTAAGGA GTACACAAATGCAGACAGGCCTATGAATGCATCAGGCCATCCTCAACAAA GCGATATGCCTCTAGGGACGAATCGAGGCAGCACAGATATCCACGCTTGC GCGAATCCCTCCATCATACGAGTATCGCTCTGGGTGCATGGCGCGTCTAT CCCGCACATGACCCCGAATGTTTCAGCTCCACTTCCAAGAGTTACGGTAT TGTTACGAGGACCCCTCTTTTCTAGCTCGATATTCCTTCGAAAGACGAGG TTAGGGTAAACGTATGAAGGAACTACTGTAGCTCTTGTGTTGGTCTGGGT TGCCAGAAACCACAACCCACCGCTTGCGTGAACACTCACCCGCCTCTGGC AATGTAGAAGAACTAGCGTTCGATTTTTCCCGCAAAATGTAAAATGTTGC GGTTACCCGTAGCATCCATGTGTGAGTGCACTCACGGAATCTAGCTTCCT GTAGATATAGAGCTATCTCCACCGACAAACTCTCCGCGCACTCGAACCGT TGGCTATTGGTCAAACGGACCAATACACCACAGGGATCCCGCGGTCCTGC GGCGACCCAGCTTGGGAGGTCAGCGAATCGATTGGCCAAGCTGCTGCCAT TCAAGAATCTAGAGGAGGGCATTCCGCGGGCAGTAGCGTTAGCGGAGCTA GAGCAGGTGAGCCAGTCAGTCATCCACGCCGAAATAAGACCGAATGTGGG CAGCATCCCGTCGTTCATTCGATCGCAGGGAATCGAATCTTAAATCAGAG AACGACATGCATAACGAGAAAGCTTTATGGGAGCGTCGTCTGTCGTGTTT TATTTTCGAGTGAGGAACTATTTCCCTAAGCCTCCACATGCCCGCTGGCT CGTAATGCCATTATCGACACGTTTCTGGCGTTGCCTTGGGCTTGGATGTG GACTTGGGTGGGGGGTGTTTTCCGACGCCTTTTGAACGGACGGAAAACCG CAGGAAATCGAGGACCTCAACATCATGCACAAGTTCGATCGACGGCTAGA GCGACTGGCGATGGTGATGCCGCTCACTGATCACTTCGATCCTGGCGTGA CGCACTTTGCGCACGAACACCTTCAGGTAACACCTTCAGGTCTGTCTTCC TCACTGACTATTAATAAATAATTAATAGAAGAGCAGAGAGATTAATGCAT TTTGGCGGTCCCAATTCAGGTCATTGCCGTCGAAAACAAAAATCCGCTAT ATGTTGCCCGTGATGACTCACCGAAAGCTCGCTCCCTCCCTGCCCCACCC CTAACCCCTGTGGTGATCATATGTGCCCCATCGTACGGGGATCGGTTTCG GTTGTGGTCGTGATATTAACAGGAGGGCGACAAGATTTCAGTACCTTCGT CGATCCTGTCCGAGCTGATTCGTAAGCAGGCCGAGATCCCATGGCAGTTT GAGCTCAAGCTCGTCCGGAGGAAGGCACCAGGGGAATACGAGCCAGTTGA CTTGTCGCCGCCACCCCGAGAGGTGAGAGTGCCGTTAGCTTCAGTGTTAT TTTCTTCTCTTCCCCTACAGGACTGCCCGCCCCCTACGAGAGGCTTCAAT ATAGGGGGGGTGTTCATGATAATGCAAAGCTGAAGGTGCGTCTTCAGCCT CAGCGCATCTGCTGCGTCGATCACGTTCTTTTTCCCTTCGCAGGCGTTGG CCGGGAAGAAAGAGATGCCGATGCTTTCAAGCGTCGCGTGCAGTATCCTG GACGCTCGCTCCCCCGAGACCTTTGTGTTCGTGCCCGATTGGATGATGAA GGCCTTGCGACTGAAGCCGAGGTGCGAACGTGCTCTCTCAAACGGTCTTT CGAGTTGGGTGATGAACTTCGGGTACAACCATCTACGGCAAAGACACTTA ATGAAAATATTTCCAATCAAACTTGTTTGCGTTCCTCACTCTTAACCATG ACACTTGCCGCATGCTGAGACGAGGATCGCCTCCTCTTGCTCACGCTACG CCATCCGCGCGCGGCTCTTATGGTTGCCCCGGTAGGGATATCGTCTTATA TCGACACAAGGACCTCAACAAGGCTAGCAAGATCGTGCTGCAGCCGCACT CCAGCGCGTTCCTCAAGATGTCCAACCACCAGGCCGTGATGGAGACGGAG CTGAGGCATTACTCGGCCATCGCCCGCGGTAATGCATGCATGATTTGTTT CTGCCAGTCCTGTACAGAAGGTAGAAAATAAGCGCACACCCTTTGTGACC TGCACGACACTTTTTGCGCCCCGAGAGTACAGCTTAGCTCTACCCCGGGT CCCGTTATCCCTTCCCCTCAGATCCCTTTCGTTCTCGCTCTGACATTTCC ATTCAGTAAAAGTAGTATATTTGCCTGTCCAAACGCTGAAAACCCCTGTC ACGGTCTACAGGCACGACCATAGCGTTCCGATATCGCAAGACCCTCTACG AATTCAACGTGCTGGAGTGCATCGATACGGACGGCAAATCGCAGGACGCT GTCTGCGTGCAGGTGACGGGAGGCGCACAAAAGTGGGATAGTATTTAAAG CAGAGTCTCGTCGTTTCGAGTTCAAATACTGTACCCCGACTACGTTCACA CTAAAAATAATAGCCGGTGTCAGATGTTTTTGTTTCGCTCTTGAGAGCAC CCTGCGCCTGGCCGCTTAAGGCGCACCAGCACCCTCGGAGCCTGAACGTG CGGCTGCAGATGCTGGTGCACCACGGGTTGAGAACGGATATTATTCATTT AACAGGGTTCACTCGTTTCAATCTTCGTATCACGACCGCTACCCTACACG TACGCTCCCAGGATTCGGATGTGGCAACAGATTTCCATGCCGCTCTCGAC ACACCAGCTGGGCGACGGCAGTCCGTCCCTACATCTTTGGGTAATGGGGG GAACACCGGGGCCGTTGATGAGGATGCGGGGGTGGAGGGGTACGATGAAG AGGACGACGAAGAACAAGGCTGGGGCAGTGATGAGTTCTAGGTGGCCTGC GAGAATCCCCCAAATTATAATCGATGTTACCTTCTGTGGCAACCTCCAGG GTCAGCGAACGTGAACTTTGCGATCTATTTCCCTCGCCGTTCGCGTGTTG TAAGCGGTACGCGCATCCTGTTTGCTTTTACGTGGCTCCTCTGGAGGGGT AGACTTGCCCGGGACGTTCGTTTTCG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1528:115167..118692-

>mRNA_F-serratus_M_contig1528.3613.1 ID=mRNA_F-serratus_M_contig1528.3613.1|Name=mRNA_F-serratus_M_contig1528.3613.1|organism=Fucus serratus male|type=CDS|length=1992bp|location=Sequence derived from alignment at F-serratus_M_contig1528:115167..118692- (Fucus serratus male)
ATGCTGCTGGCTGCTGTTCCCCTCCTTGCTGGATCTACCGCAGGAAAGAT
GCTGCTGGCTGCTGTTCCCCTCCTTGCTGGATCTACCGCAGGAAAGGGAT
CCCGCGGTCCTGCGGCGACCCAGCTTGGGAGGTCAGCGAATCGATTGGCC
AAGCTGCTGCCATTCAAGAATCTAGAGGAGGGCATTCCGCGGGCAGTAGC
GTTAGCGGAGCTAGAGCAGGGATCCCGCGGTCCTGCGGCGACCCAGCTTG
GGAGGTCAGCGAATCGATTGGCCAAGCTGCTGCCATTCAAGAATCTAGAG
GAGGGCATTCCGCGGGCAGTAGCGTTAGCGGAGCTAGAGCAGGAAATCGA
GGACCTCAACATCATGCACAAGTTCGATCGACGGCTAGAGCGACTGGCGA
TGGTGATGCCGCTCACTGATCACTTCGATCCTGGCGTGACGCACTTTGCG
CACGAACACCTTCAGGAAATCGAGGACCTCAACATCATGCACAAGTTCGA
TCGACGGCTAGAGCGACTGGCGATGGTGATGCCGCTCACTGATCACTTCG
ATCCTGGCGTGACGCACTTTGCGCACGAACACCTTCAGGAGGGCGACAAG
ATTTCAGTACCTTCGTCGATCCTGTCCGAGCTGATTCGTAAGCAGGCCGA
GATCCCATGGCAGTTTGAGCTCAAGCTCGTCCGGAGGAAGGCACCAGGGG
AATACGAGCCAGTTGACTTGTCGCCGCCACCCCGAGAGGAGGGCGACAAG
ATTTCAGTACCTTCGTCGATCCTGTCCGAGCTGATTCGTAAGCAGGCCGA
GATCCCATGGCAGTTTGAGCTCAAGCTCGTCCGGAGGAAGGCACCAGGGG
AATACGAGCCAGTTGACTTGTCGCCGCCACCCCGAGAGGCGTTGGCCGGG
AAGAAAGAGATGCCGATGCTTTCAAGCGTCGCGTGCAGTATCCTGGACGC
TCGCTCCCCCGAGACCTTTGTGTTCGTGCCCGATTGGATGATGAAGGCCT
TGCGACTGAAGCCGAGGCGTTGGCCGGGAAGAAAGAGATGCCGATGCTTT
CAAGCGTCGCGTGCAGTATCCTGGACGCTCGCTCCCCCGAGACCTTTGTG
TTCGTGCCCGATTGGATGATGAAGGCCTTGCGACTGAAGCCGAGGGATAT
CGTCTTATATCGACACAAGGACCTCAACAAGGCTAGCAAGATCGTGCTGC
AGCCGCACTCCAGCGCGTTCCTCAAGATGTCCAACCACCAGGCCGTGATG
GAGACGGAGCTGAGGCATTACTCGGCCATCGCCCGCGGGATATCGTCTTA
TATCGACACAAGGACCTCAACAAGGCTAGCAAGATCGTGCTGCAGCCGCA
CTCCAGCGCGTTCCTCAAGATGTCCAACCACCAGGCCGTGATGGAGACGG
AGCTGAGGCATTACTCGGCCATCGCCCGCGGCACGACCATAGCGTTCCGA
TATCGCAAGACCCTCTACGAATTCAACGTGCTGGAGTGCATCGATACGGA
CGGCAAATCGCAGGACGCTGTCTGCGTGCAGGCACGACCATAGCGTTCCG
ATATCGCAAGACCCTCTACGAATTCAACGTGCTGGAGTGCATCGATACGG
ACGGCAAATCGCAGGACGCTGTCTGCGTGCAGGATTCGGATGTGGCAACA
GATTTCCATGCCGCTCTCGACACACCAGCTGGGCGACGGCAGTCCGTCCC
TACATCTTTGGGTAATGGGGGGAACACCGGGGCCGTTGATGAGGATGCGG
GGGTGGAGGGGTACGATGAAGAGGACGACGAAGAACAAGGCTGGGGCAGT
GATGAGTTCTAGGATTCGGATGTGGCAACAGATTTCCATGCCGCTCTCGA
CACACCAGCTGGGCGACGGCAGTCCGTCCCTACATCTTTGGGTAATGGGG
GGAACACCGGGGCCGTTGATGAGGATGCGGGGGTGGAGGGGTACGATGAA
GAGGACGACGAAGAACAAGGCTGGGGCAGTGATGAGTTCTAG
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