mRNA_F-serratus_M_contig1528.3612.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1528.3612.1
Unique NamemRNA_F-serratus_M_contig1528.3612.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1528.3612.1 vs. uniprot
Match: D7FNG9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG9_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 1.400e-106
Identity = 194/335 (57.91%), Postives = 225/335 (67.16%), Query Frame = 2 
Query:   65 MTSLDFHSLLKQEKTLCRSELAAETTQRQSSEAVQFCTXXXXXXXXXXXXSAVRANDGIAVAKVHVASGFSTSEEKLPVPYFAELAVRPAIDMEKTRVGTIPTIFYAPSFVSEEEGKQILARTYAANAPGKTDVDWVKLRTRRLKCWGGQPGKDFRLKPLPPWVQSLCDALVQSGVFSAEERPNHVLLNEYQPGEGIMPHTDGPFYAPRTATLSLGSDAVMHFSPRVTAEDIGKPGVDSKPLASLVLRERCLVVFADDAYSRLLHGIDALSEETVGA--------RR--------APVINADVAEASEGTVIQRKLRVSLTFRRVCAGGASEKTG 1021
            MTSLDF SLLKQEK L R +LA  T     + AVQ   XXXXXXXXXXXX          V              K P P   +LA RP++DMEK RVG  P+IFY P F+S  + +Q+L R +A  +      +WV LR+RRLKCWGGQPG+ FR +PLPPWV +LC++LV  GVFS E RPNHVLLNEYQPG+GIM HTDGPFY PRTATLSLGSDAVMHFSPR+    IG+PGV+++P ASLVLR   LVVFADDAYSRLLH IDA+ EETVG         +R        APVIN   A A EGT+++RKLRVSLTFRRV A    E+TG
Sbjct:    1 MTSLDFQSLLKQEKALQRVQLAQSTR----TTAVQXXXXXXXXXXXXXXXXXXXXXXESKVVGT-----------KEPSPLLVKLAGRPSLDMEKMRVGNTPSIFYVPDFISGADEQQLLERIHAQASSN----EWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCGGSSGDVGKRGGGGVGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRVRAADRGEETG 316
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BLAST of mRNA_F-serratus_M_contig1528.3612.1 vs. uniprot
Match: A0A835ZDT2_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT2_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.620e-61
Identity = 116/242 (47.93%), Postives = 146/242 (60.33%), Query Frame = 2 
Query:  329 PAIDMEKTRVGTIPTIFYAPSFVSEEEGKQILARTYAANAPGKTDVDWVKLRTRRLKCWGGQPGKDFRL---KPLPPWVQSLCDALVQSGVFSAEERPNHVLLNEYQPGEGIMPHTDGPFYAPRTATLSLGSDAVMHFSPRVTAE-DIGKPGVDSKPLASLVLRERCLVVFADDAYSRLLHGIDALSEETVG---ARRAPVINA-DVAEASEGTVIQRKLRVSLTFRRVCAGGASEKTGSQR 1030
            P +D++  R GTIP+++Y P FV+     +I+ + YA     +    W  LRTRRL+CWGGQ   D R      L PW+Q LC  LV  G+F A   PNHVL+NEYQPG+GIMPHTDGP Y PRTATLSL SDAV   + R  +  DIG   VD  P  +L+LR R LVVFAD AY+   HGID + EE VG        V+N  +   A E  V++R LR+SLTFR V     + +TG Q+
Sbjct:    6 PTVDLQSHRTGTIPSVYYNPDFVTASLADEIIKQVYAVP---EGHARWTVLRTRRLQCWGGQLQADGRAHDPSDLCPWLQQLCTLLVTCGIFPAHAPPNHVLINEYQPGQGIMPHTDGPMYYPRTATLSLMSDAVFKLAQRPRSPGDIGS--VDLSPTEALLLRNRSLVVFADAAYTDFTHGIDFVHEEAVGDGSGGTCSVVNGPEAGVAEEEVVVERALRISLTFRHV---PDAARTGQQQ 239
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BLAST of mRNA_F-serratus_M_contig1528.3612.1 vs. uniprot
Match: A0A7S2G6U9_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6U9_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.710e-61
Identity = 141/311 (45.34%), Postives = 188/311 (60.45%), Query Frame = 2 
Query:   65 MTSLDFHSLLKQEKTLCRSELAAETTQRQSSEAVQFCTXXXXXXXXXXXXSAVRANDGIAVAKVHVASGFSTSEEKLPVPYFAELAVRPAIDMEKTRVGT-IPTIFYAPSFVSEEEGKQILARTYAANAPGKTDVDWVKLRTRRLKCWGGQPGKDFRLKPLPPWVQSLCDALVQSGVFSAEERPNHVLLNEYQPGEGIMPHTDGPFYAPRTATLSLGSDAVMHFSPRVTAEDIGKPGVDSKPLASLVLRERCLVVFADDAYSRLLHGIDALSEETVGARRAPVINADVAEASEGTVIQRK-LRVSLTFRRV 991
            M ++D  +L+++EK   R+E+AAE   + S E      XXXXXXXXXXXX                A+G +   + +  P F     RP + +    V + + T+ Y P +V+E+E   I+A+TYA      +   WV LR RRL+CWGG+P +D   +PLPPW+Q L + LV++G+F AE  PNHVLLNEY+ GEGIM HTDG FY P+TATLSLG  AVM F+PRV    +G   VD +P+A +VLR R LVVF ++AY   LH I A   + VGA  APV N + A A  G VI R  +R+SLTFR +
Sbjct:    1 MAAIDMKALMREEKARMRAEMAAEMAAK-SGEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGAAV--DSIDFPPFDRWTSRPRVKLTDYDVDSKLKTVSYLPEWVAEDEEAAIMAQTYAVP---DSHPSWVTLRGRRLQCWGGEPRRDSAAEPLPPWLQRLSEGLVEAGIFPAEVAPNHVLLNEYKAGEGIMAHTDGDFYHPQTATLSLGGTAVMTFAPRVQPRAVGL--VDGRPVAEVVLRPRSLVVFREEAYLDHLHAIAASHSDEVGAA-APVANLESAGARLGEVIARPAVRLSLTFRHI 302
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BLAST of mRNA_F-serratus_M_contig1528.3612.1 vs. uniprot
Match: A0A7S2G3H8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3H8_9STRA)

HSP 1 Score: 187 bits (476), Expect = 5.710e-55
Identity = 96/192 (50.00%), Postives = 128/192 (66.67%), Query Frame = 2 
Query:  431 TYAANAPGKTDVDWVKLRTRRLKCWGGQPGK--DFRLKPLPPWVQSLCDALVQSGVFSAEERPNHVLLNEYQPGEGIMPHTDGPFYAPRTATLSLGSDAVMHFSPRVTAEDIGKPGVDSKPLASLVLRERCLVVFADDAYSRLLHGIDALSEETVGARRAPVINADVAEASEGTVIQRK-LRVSLTFRRVCA 997
            +YA  +P      W+ L  RR++CWGGQP +   F  +PLPPW+  +C ALV +GVF +E RPNHVL+NEY  GEGI+PH+DGP Y P+TATLSLG  A+M F PR+++ DIG+  V S P+  ++LR R LVVF D AY   +H I +   + VG+R  P IN  ++ A  G ++QR  +RVSLTFR V A
Sbjct:    9 SYAIESP------WISLSGRRVQCWGGQPNERTKFVPEPLPPWLVDICTALVDAGVFPSEVRPNHVLINEYANGEGILPHSDGPMYFPKTATLSLGGSAIMTFEPRISSGDIGE--VSSDPICEVILRPRSLVVFEDAAYIDYMHAIASRQTDQVGSRAVP-INLALSGARHGEMVQRPAIRVSLTFRHVTA 191
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BLAST of mRNA_F-serratus_M_contig1528.3612.1 vs. uniprot
Match: A0A4D9DGD1_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DGD1_9STRA)

HSP 1 Score: 174 bits (441), Expect = 9.030e-48
Identity = 92/213 (43.19%), Postives = 130/213 (61.03%), Query Frame = 2 
Query:  374 IFYAPSFVSEEEGKQILARTYAANAPGKTDVDWVKLRTRRLKCWGGQPGKD---FRLKPLPPWVQSLCDALVQSGVFSAEERPNHVLLNEYQPGEGIMPHTDGPFYAPRTATLSLGSDAVMHFSPRVTAEDIGKPGVDSKPLASLVLRERCLVVFADDAYSRLLHGIDALSEETVGARRA--PVINADVAEA--SEGTVIQRKLRVSLTFRRV 991
            +FY P ++S+E  ++I+   ++          WVKLR RRL+C+GG+P ++   F+ + LPPW+  +C  L+ +GVF  E  PNHVLLNEY+PG+GIM H DGPFY  R A +SLG  A+  F  R+ AE+I     +S P  ++VL  R L+VF  +AY   LH I A+ EE VG      PV+N +  E   + G  ++R LR+SLT RRV
Sbjct:  134 VFYVPEYISKEMEQEIMEVAHSMPVN-----QWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESGPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGTTPVLNLERLEGRINVGDRLKRALRLSLTCRRV 341
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BLAST of mRNA_F-serratus_M_contig1528.3612.1 vs. uniprot
Match: A0A2R5GWX9_9STRA (Alpha-ketoglutarate-dependent dioxygenase alkB-like 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWX9_9STRA)

HSP 1 Score: 167 bits (423), Expect = 6.860e-46
Identity = 99/257 (38.52%), Postives = 139/257 (54.09%), Query Frame = 2 
Query:  215 SAVRANDGIAVAKVHVASGFSTSEEKLPVPYFAELAVRPAIDMEKTRVGTIPTIFYAPSFVSEEEGKQILARTYAANAPGKTDVDWVKLRTRRLKCWGGQPGKDFRLKPLPPWVQSLCDALVQSGVFSAEERPNHVLLNEYQPGEGIMPHTDGPFYAPRTATLSLGSDAVMHFSPRVTAEDIGKPGVDSKPLASLVLRERCLVVFADDAYSRLLHGIDALSEETVGARRAPVINADVAEASEGTVIQRKLRVSLTFR 985
            +AV A DG+   +VH ASG                               +  ++Y P+F + EE   +L +TY+  A       W  +R+RRL+C        +R   +PPW+ +L  +LVQ+G+FS  +RPNH LLNEY+PG+GI+ HTDGP Y    A +SLGS A   F+ R+  ++IG    +++ LA+L+L+ R LVVFA DAY   LH + AL EE V A    V N + A+AS G  I R  RVS+T R
Sbjct:   70 NAVLARDGLEAFRVHAASG-------------------------------LRDVWYIPNFCTVEEHDDMLEQTYSKAA------SWKDIRSRRLQC--------YREPEMPPWLDTLASSLVQAGIFSPAQRPNHALLNEYEPGQGILGHTDGPVYHSLVACISLGSPATFRFTERLLTDEIGVR--EARELATLLLQPRSLVVFAADAYREALHSVPALLEEVVSA---DVANIEAAQASVGDRIPRTTRVSITMR 276
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BLAST of mRNA_F-serratus_M_contig1528.3612.1 vs. uniprot
Match: A0A665W4V9_ECHNA (AlkB homolog 6 n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665W4V9_ECHNA)

HSP 1 Score: 159 bits (401), Expect = 2.310e-43
Identity = 83/213 (38.97%), Postives = 124/213 (58.22%), Query Frame = 2 
Query:  359 GTIPTIFYAPSFVSEEEGKQILARTYAANAPGKTDVDWVKLRTRRLKCWGGQPG-KDFRLKPLPPWVQSLCDALVQSGVFSAEERPNHVLLNEYQPGEGIMPHTDGPFYAPRTATLSLGSDAVMHF-SPRVTAEDIGKPGVDSKPLASLVLRERCLVVFADDAYSRLLHGIDALSEETVGARRAPVINADVAEASEGTVIQRKLRVSLTFRRV 991
            G +PT++Y P F+SE+E   +L + Y +         W +L  RRL+ WGG P  K   ++ +P W+Q+ C+ +   G FS + + NHVL+NEY+PGEGIMPH DGP Y P   T+SLGS  ++ F +P  T E       +++ L SL+++ R L++  D+ Y  LLHGI   +++T+  +   V+N   A A  G  + R  RVSLT R V
Sbjct:    9 GALPTVYYIPDFISEDEESYLLQQVYKS-----PKTKWTQLSGRRLQNWGGLPHPKGMLVEKIPDWLQTYCEKISSLGAFSGK-KANHVLMNEYKPGEGIMPHEDGPLYHPTVTTISLGSHTLLDFYTPVNTLEGDAPQTEENRYLFSLLVKPRSLLILQDEMYQHLLHGIRPCTQDTLTDK---VVNLSTAGALSGETLTRSTRVSLTVRHV 212
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BLAST of mRNA_F-serratus_M_contig1528.3612.1 vs. uniprot
Match: A0A7S0PB53_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PB53_CAFRO)

HSP 1 Score: 160 bits (406), Expect = 5.100e-43
Identity = 95/191 (49.74%), Postives = 119/191 (62.30%), Query Frame = 2 
Query:  470 WVKLRTRRLKCWGGQPGKDFRL---KPLPPWVQSLCDALVQSGVFSAEERPNHVLLNEYQPGEGIMPHTDGPFYAPRTATLSLGSDAVMHFSPRVTAEDIGKPGVDSKPLASLV---LRERCLVVFADDAYSRLLHGIDALSEETVGARRAPVINADVAEASEGTVIQRK-LRVSLTFRRVCA--GGASEK 1015
            WV+LR RRL  +GG P    RL   +PLPPW+ ++ D LV +G F  ++RPNHVL+N Y PGEGI+PHTDGP Y P TATLSLGSDAVM F+PRV +E +G         A      L  R LVVF+D+AY+  LH + A+ E  V A+    +NA     +EG++I R  LRVSLT R V A  G  S K
Sbjct:  128 WVRLRGRRLLQFGGTPMPGPRLLGREPLPPWLGAVVDRLVATGAFPEDKRPNHVLVNAYGPGEGILPHTDGPLYFPCTATLSLGSDAVMRFAPRVPSELVGTSSQSHLEAAKSFDAGLARRSLVVFSDEAYTSALHDVAAVGEHRVTAK---CLNAASLGWAEGSLIPRAPLRVSLTMRHVPAVKGATSPK 315
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BLAST of mRNA_F-serratus_M_contig1528.3612.1 vs. uniprot
Match: A0A3Q2DRJ9_CYPVA (AlkB homolog 6 n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2DRJ9_CYPVA)

HSP 1 Score: 156 bits (395), Expect = 2.320e-42
Identity = 90/221 (40.72%), Postives = 123/221 (55.66%), Query Frame = 2 
Query:  338 DMEKTRVGTIP-TIFYAPSFVSEEEGKQILARTYAANAPGKTDVDWVKLRTRRLKCWGGQPG-KDFRLKPLPPWVQSLCDALVQSGVFSAEERPNHVLLNEYQPGEGIMPHTDGPFYAPRTATLSLGSDAVMHFSPRVTAEDIGKPGVD-SKPLASLVLRERCLVVFADDAYSRLLHGIDALSEETVGARRAPVINADVAEASEGTVIQRKLRVSLTFRRV 991
            D+E+ RV   P T+FY P FVS EE   +L R Y +         W +L  RRL+ WGG P  +    + +P W+Q+LC+ +   G F    R NHVL+NEY PG+GIMPH DGP Y P  +T+SLGS  ++ F   V+  +  +P    ++ L SL+LR R L+V  DD Y  L HGI     +T+  +   V+N   A+A  G  + R  RVSLT R V
Sbjct:   10 DLERFRVPEAPQTVFYVPDFVSPEEESFLLERVYRSPR-----TKWTQLSGRRLQNWGGLPHPRGMMAEEVPDWLQNLCEKISSLGAFGGN-RANHVLVNEYGPGQGIMPHQDGPLYHPTVSTVSLGSHTLLDFYRPVSGLEGAEPQTQQNRYLFSLLLRPRSLLVLQDDMYQNLQHGIQERDRDTLTRQ---VLNLSAAQARSGETLLRGTRVSLTIRHV 221
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BLAST of mRNA_F-serratus_M_contig1528.3612.1 vs. uniprot
Match: A0A3B4TVP8_SERDU (AlkB homolog 6 n=7 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3B4TVP8_SERDU)

HSP 1 Score: 155 bits (393), Expect = 4.090e-42
Identity = 84/211 (39.81%), Postives = 122/211 (57.82%), Query Frame = 2 
Query:  365 IPTIFYAPSFVSEEEGKQILARTYAANAPGKTDVDWVKLRTRRLKCWGGQPG-KDFRLKPLPPWVQSLCDALVQSGVFSAEERPNHVLLNEYQPGEGIMPHTDGPFYAPRTATLSLGSDAVMHFSPRVTAEDIGKPGVD-SKPLASLVLRERCLVVFADDAYSRLLHGIDALSEETVGARRAPVINADVAEASEGTVIQRKLRVSLTFRRV 991
            +PT+ Y P F+SE+E   +L + Y +         W +L  RRL+ WGG P  K    + +P W+Q+ C+ +   G FS +   NHVL+NEY+ GEGIMPH DGP Y P   T+SLGS  ++ F   V++ +   P  + ++ L SL+++ R L++  DD Y RLLHGI A +++T+  R   V+N   A A  G  + R  RVSLT R V
Sbjct:   16 LPTVHYIPDFISEDEESYLLQQVYKS-----PKTKWTQLSGRRLQNWGGLPHPKGMLAEKIPDWLQTYCEKISSLGAFSGKTA-NHVLVNEYKQGEGIMPHEDGPLYHPTVTTISLGSHTLLDFYTPVSSLEGDAPQTEENRYLFSLLVKPRSLLILQDDMYQRLLHGIQACAQDTLTDR---VVNLSAAGALPGDTLTRDTRVSLTIRHV 217
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1528.3612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNG9_ECTSI1.400e-10657.91Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A835ZDT2_9STRA2.620e-6147.93Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2G6U9_9STRA2.710e-6145.34Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2G3H8_9STRA5.710e-5550.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9DGD1_9STRA9.030e-4843.19Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A2R5GWX9_9STRA6.860e-4638.52Alpha-ketoglutarate-dependent dioxygenase alkB-lik... [more]
A0A665W4V9_ECHNA2.310e-4338.97AlkB homolog 6 n=1 Tax=Echeneis naucrates TaxID=17... [more]
A0A7S0PB53_CAFRO5.100e-4349.74Hypothetical protein n=1 Tax=Cafeteria roenbergens... [more]
A0A3Q2DRJ9_CYPVA2.320e-4240.72AlkB homolog 6 n=2 Tax=Cyprinodon TaxID=28741 RepI... [more]
A0A3B4TVP8_SERDU4.090e-4239.81AlkB homolog 6 n=7 Tax=Percomorphaceae TaxID=14898... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1528contigF-serratus_M_contig1528:109491..115036 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score324.7
Seed ortholog evalue4.9e-86
Seed eggNOG ortholog2880.D7FNG9
KEGG koko:K10768
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ferrous iron binding
EggNOG OGsKOG3200@1,KOG3200@2759
Ec32 ortholog descriptionAlpha-ketoglutarate-dependent dioxygenase AlkB-like
Ec32 orthologEc-01_005500.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons3
Model size1072
Cds size981
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1528.3612.1prot_F-serratus_M_contig1528.3612.1Fucus serratus malepolypeptideF-serratus_M_contig1528 109555..115009 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929514.408877-UTR-F-serratus_M_contig1528:109490..1095541622929514.408877-UTR-F-serratus_M_contig1528:109490..109554Fucus serratus maleUTRF-serratus_M_contig1528 109491..109554 +
1690962887.4593723-UTR-F-serratus_M_contig1528:109490..1095541690962887.4593723-UTR-F-serratus_M_contig1528:109490..109554Fucus serratus maleUTRF-serratus_M_contig1528 109491..109554 +
1622929514.4704013-UTR-F-serratus_M_contig1528:115009..1150361622929514.4704013-UTR-F-serratus_M_contig1528:115009..115036Fucus serratus maleUTRF-serratus_M_contig1528 115010..115036 +
1690962887.4965932-UTR-F-serratus_M_contig1528:115009..1150361690962887.4965932-UTR-F-serratus_M_contig1528:115009..115036Fucus serratus maleUTRF-serratus_M_contig1528 115010..115036 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929514.421444-CDS-F-serratus_M_contig1528:109554..1098391622929514.421444-CDS-F-serratus_M_contig1528:109554..109839Fucus serratus maleCDSF-serratus_M_contig1528 109555..109839 +
1690962887.4710307-CDS-F-serratus_M_contig1528:109554..1098391690962887.4710307-CDS-F-serratus_M_contig1528:109554..109839Fucus serratus maleCDSF-serratus_M_contig1528 109555..109839 +
1622929514.4329743-CDS-F-serratus_M_contig1528:114160..1144431622929514.4329743-CDS-F-serratus_M_contig1528:114160..114443Fucus serratus maleCDSF-serratus_M_contig1528 114161..114443 +
1690962887.4790537-CDS-F-serratus_M_contig1528:114160..1144431690962887.4790537-CDS-F-serratus_M_contig1528:114160..114443Fucus serratus maleCDSF-serratus_M_contig1528 114161..114443 +
1622929514.4484122-CDS-F-serratus_M_contig1528:114596..1150091622929514.4484122-CDS-F-serratus_M_contig1528:114596..115009Fucus serratus maleCDSF-serratus_M_contig1528 114597..115009 +
1690962887.4889078-CDS-F-serratus_M_contig1528:114596..1150091690962887.4889078-CDS-F-serratus_M_contig1528:114596..115009Fucus serratus maleCDSF-serratus_M_contig1528 114597..115009 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1528.3612.1

>prot_F-serratus_M_contig1528.3612.1 ID=prot_F-serratus_M_contig1528.3612.1|Name=mRNA_F-serratus_M_contig1528.3612.1|organism=Fucus serratus male|type=polypeptide|length=327bp
MTSLDFHSLLKQEKTLCRSELAAETTQRQSSEAVQFCTTTTKPPPSSSAA
SAVRANDGIAVAKVHVASGFSTSEEKLPVPYFAELAVRPAIDMEKTRVGT
IPTIFYAPSFVSEEEGKQILARTYAANAPGKTDVDWVKLRTRRLKCWGGQ
PGKDFRLKPLPPWVQSLCDALVQSGVFSAEERPNHVLLNEYQPGEGIMPH
TDGPFYAPRTATLSLGSDAVMHFSPRVTAEDIGKPGVDSKPLASLVLRER
CLVVFADDAYSRLLHGIDALSEETVGARRAPVINADVAEASEGTVIQRKL
RVSLTFRRVCAGGASEKTGSQRSLLA*
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mRNA from alignment at F-serratus_M_contig1528:109491..115036+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1528.3612.1 ID=mRNA_F-serratus_M_contig1528.3612.1|Name=mRNA_F-serratus_M_contig1528.3612.1|organism=Fucus serratus male|type=mRNA|length=5546bp|location=Sequence derived from alignment at F-serratus_M_contig1528:109491..115036+ (Fucus serratus male)
CAGGTGTACATGGTCGACATGCCAGGGCCTGAAAAACTGATCAACCTACT
CGCAAGTTTTCCCAATGACGAGTCTAGACTTCCACAGCCTACTGAAGCAA
GAGAAGACTCTTTGCCGGTCAGAGCTTGCAGCCGAGACGACACAACGGCA
GTCCTCGGAGGCGGTGCAATTTTGTACCACCACAACGAAGCCGCCACCCT
CCTCATCAGCCGCGTCTGCCGTTCGGGCTAACGATGGCATAGCCGTAGCG
AAGGTACATGTGGCGTCGGGGTTCAGCACTTCCGAAGAAAAGCTGCCAGT
GCCATATTTTGCAGAGCTTGCGGTGCGACCAGCAATCGATATGGAAAAGG
TAAGGTTTTACAAGCATACTACAGCACGAGCAGGTACATGGCGACTACAG
CAGTGTGTTTTTAAAGAAAAATATGAAGGCACCTAGACCTTCTGATCCGC
CCCCGGTAGGGGGGAAAAAAAATCAAAACTTTTAAGTGGTATCAAAGGCT
GCAAATACAAAACCTCTTCGTGGCATTTAAACGGGTTCCCCGATGCAGAT
AACATTAGGTCAACAGTATAATGTCGGGGAGAAACCCACCGTTATAATGT
AGACTTACATTAATCGCCAGGCAGGGACACCATAAAAACAGCAGAGACAA
AATAGTACATCATCAAACAGTAAAGACGAATCCAATACAACATTGAAACG
GGAGCAGAGGAGGGCCATGGTGATGGTGTGGAATCTTCATATTATCCAAG
TACACGACACCGTTCACCTGGAATTAGCCGAAGAGCAGTGGGAGATCACA
CAAGGAAGTAAGAGGCGAGCGGAAAGAACTGGGTTCCTCGCTCAATACTG
TCAGGGCTACGACCCACAGATGCTCCTCATACATGGACTTAGCGATGGCC
CCGCGGTGACCAGAAACAAGAAGAGGAAGAAGCATCTGTTTGTCAAAATG
ATTCTTCCCATTCATTCTGGACATCAAGTTCGTTGGACGTACCAGCCGGG
GTCGCACACAGGAGTAAGGTCACACAGGATTTCTTATCCACCTTCCTTCT
GCGATGCGTGCCTTAATTTTTCTCGCGAGAAGGATTTAGCCATTCCTTTC
CCTCGTCGACCGTGAAGTCGAGTTTTGTGTAACTAACTATTTAATCGTTC
TCCACTCGTTGGGCATTTTTTTTTTAGTTTTTAGTTTTTAGTTAGAAAAA
TCCCGTTTGCCGGGATCGAACTCACGTCCCAACGTGTCAGAAGGTTACGA
GGTTACCTCTGAACTACCGGGGCGACCGGTCATACCAAAGTTTATGCGTG
TATCTCGTTAGAATACGAAAAAGTGTACGCGCCTAGACCTTCTGAGCATC
CCCCGGTCAGGGGGAAAAAATGTCAAAACGTTTAGGTGGGATCTAGGCTG
CAAGAACAAAACCTCTTCAAGACATTTTAACGGGTTCCCCGATGGTATAG
TAACATTGAGTCAACAGTATAATGTCGGGGAGAAGCCCACCGTTTTACTG
TACGCTTCCATTAATCGCCATGCAGGGACACCAAAAAAACTTCAACAAAT
AAAAACATTGTATAATAGTACATACCACAACCAAAACCATCCAAAAAACA
ATCTAGTACGTAATTAGATAGGTTGTTGTACATAGGCTCTAATTTATTAG
TGTACAGTAAAATACAGGACAGTACCATAGTAATACTAGTATACGATAAT
AAGTGTCATCGAACAATACTACAATACACTGTGAGCCATAAAAGTGAAGT
ACATAACAACGTTATGATAATATAATATTGGCAACACGTTTCCGACGACT
ATCAATAGGCGCCGGTACTTTCAGCATGCCCACTTCATACCAATAGTGGG
TGTGGGAAAGAGAGGCGTATATTAATTGGTCCATGGTGACCTGCTAAGGC
AGCACTCGTTCGGAACTACCTTGAGGTTTACTGGCCCTGTGCCGGTGGAT
TCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGACAAAATTG
GGACTTACCCGATGGCGTATGGCGGTTTAATATAAATATATGGACGCCGC
CGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAGATTCAGCCTGGGT
ATGGAGATGAGGAGGCTGACGCGGGATGGGACTGCCGAAACCGTCTCGCG
AGACCAAATTCTCAGGCACGAACGCGGACAGGGGAATAACATTTTCCCTG
TTCAGCTGACCACGAGCAGGATTGACAACCTTACACGGTTGATCCATACT
CTTGCTATATGTGTGACCATACAGTATTGGCAACACTTGTTACACTTTCG
TTTTACAACACTATACACTATACACTATAACAGCCCATGGGGACTTTATA
CCATGTTACCTACATGTATTCAGTACGTATTCAGTGCGTGTTTGTAGTTG
TTCACTCTATGTGTTAAATTTGTAACAAGATAATGATTATGGTACAGGAC
AGTCTTTACTCGTTCTCTACTCTATAATATAGTAGGGTCTGTTGTACTCA
ACTCACAGTTACATTATTATTAGTCCAGGAGCGCACAGGCATTACTTGTA
CTGCTGTACTGTATATATGGTCATCATACATACCTGGTAGCAGAGTATGG
ATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCCGAACAGGGAA
AATGAATATTCCCCTGTCTGCGTTCGCGCCTGATAGTTTGGTCTCGCGAG
ACGAGTTCAGCCGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCAA
GCTGAATCTGGTGCTTACTCACGGGACCCCTCCCGAGTTCCGCGACGGCG
TCCATTTATGAAACCTCCATACGCCGTCGGGTCAGTCCCGAGTTTATCGG
GTCACGTAATTACGTACCGATGGCGTTCACCGCCGCGAGTCCGCCGGCAC
AGAGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGCCTTGGCAGGC
CACGGTGGAGCAATTAATATGCGCCTCTCTTCCCCACACCTACTATTGGT
ATGAAGTGGGCATGCTAAAAGTACCGATGTACAACAGGTGGGATGCAATT
GGAACACACGCTTCTTCGATTTCAAGATACTGCTCGATTAGAGTTTACAA
CACTAGGCTTTACAATAGTGGACACTTCACCATACACAAAACTTATATAC
TACAAGTACAAGGTACTACAAACGTAAATATTTGTAATACCTGTTTACGC
CGCTCCACAAGCACATACCAGTATTTGTTTTTCGAAAGTCAAAATGAATC
CAACCCCCCTAGCATCAAGATGCGAACATTTGGGACGAACATCACCTACG
ATCCCACCTAAACGTTTTGACATCCCCCCCCCCCCGCCCCCTGGGGTACA
GTACAGTACAGTACAGTATAGTATAGTATGCTCAGAAGGTCTAGATGCGT
TCGTATTTTTCTTGAAAAACTACACATAAGTTTTAATCGTCAGGTTCCTC
GGTGATGCCTCCGGTGCAGTGGGGAACAAACCCACTTCACTCTGTACACG
TCCACCAACCACTGTCTTACGACCAGTGGCTCTAGCACATGGCACCGATA
CGGTTTTAAAATACGCCGTCACCTCCAACAGGGTTTAACGAAAAATCAGA
ACACATCTAAACACTATTGAGTCATCAATTCTGCATCGCGTTACCTCTCT
TGCGACGAGGCTACAACGTGCTAATCAACTAATAGATAGTTGGGGGGTGC
CCGATTGAACCCCCGATCATACCCCCGAAATCATCAAAACCGTTCTAATC
AGCGAGCGCTGTCGTTCGAGCACCGACCATCCTCGTCGCTCTTTTTGACG
AGTCGAGCCTGATGTCCGCAATCCGGACTCTTAGGGCCAACCGCTATCGG
ACCACAAAGCTACAAAAATGAACAAATTTCCATAGTTTTTTTTTGTGGGA
AGCGCGCTATGGGAGCAAAAAAACCCGGAAATGATCCGAAAATCTTGTAG
TTCTGTGTTTTTTTTTGTTCTGTACGTGACCACAGAGGTAGGGAACTGTT
CACGCCTCTCGAAGCACTGTACAAAACCTGCCTTTAGAGAGGACGAGACG
TGCCCAAGGGGGACCAAATAAAATCAACTACTCCCATGGTCGCCGGAGCA
GCAGCAGCGGACGAGCACTACGATTGCATCTGATCTGTAAACTACCTGAC
CACCTGTGTGGACGGAATGGATGGCGAAAGCATACCCGATGAAGAGATCG
CGGCTGAGGTGGCCCTCGGAGCAATCGTGATTGAGCACTGATCCACTCTA
TCCGGCATCGCTGTGGTCTGGTCTAGCTGATGGCGTTGTTAGTTGCTATG
ATGGCTACCCGATGATGGGATGTCCCGCCTCATTTTCAAATTTCAAACTG
GGGGGCTAGATACTTGGATAGCCAGTATTCCGCGGACCTCCGTCTCATTT
TGTATTTTTTGCGTTTATTCGCCCAAGCCCATACATAGCGGGGCACAACA
AATAAGAAAATACAGAAATTTTTGCTGCGCGGAAATCAACATTTTTTTAA
TGTTTCATTTTTGTATTTTTGTGGTCCCATAATAGCGGTCGGTCTGATGA
GCCACTTTACCGATTTATTTTTTTGTCGCCTACACCTTGGCAGGCAGGAT
TAGCCACAATCCGTAGTAATCTAAACCACTGTTGTATCGGTTTCTTTTTT
TGTCGCCTACACCGTGGCAGACACGGGTAGGTACCATTCCGACAATTTTC
TACGCTCCCAGCTTCGTGTCCGAGGAGGAAGGGAAGCAAATACTAGCGAG
AACGTACGCCGCTAACGCCCCGGGGAAAACGGATGTCGATTGGGTCAAGC
TGAGGACGCGGCGGCTGAAGTGCTGGGGCGGGCAGCCGGGAAAAGATTTT
CGACTCAAGCCGCTTCCGCCGTGGGTTCAATCGCTGTGCGACGCGTTGGT
TCAAAGTGGGGTGTTTTCGGCGGAAGAAAGGCCAAACCACGTACTCTTGA
ACGGTGAGCACGATAAAGTATTTTCGCCGCTTATTTCCTCTCACATCCGT
AACAGCTTGCGTGCTACTTCATCACTGCATGACATATGTACTGATTGTAT
CGTACTTCCATTGCTGCTTTTGCGTCACCCGGACCGTGAATTCTCTTAAT
AATAAGAGTACCAGCCGGGCGAAGGCATAATGCCTCATACGGATGGGCCA
TTCTACGCGCCGCGCACTGCGACGCTCAGCCTTGGCAGCGACGCGGTGAT
GCACTTCTCGCCAAGAGTCACCGCGGAGGATATCGGGAAACCTGGAGTAG
ACTCTAAGCCGCTAGCGTCTCTCGTGCTTAGGGAGCGTTGTCTCGTGGTG
TTTGCCGACGACGCGTACTCCCGGTTGTTACACGGCATAGATGCACTTAG
CGAAGAAACGGTTGGCGCTCGAAGAGCCCCGGTCATCAACGCAGATGTGG
CGGAGGCATCCGAGGGAACCGTCATTCAACGAAAGTTGAGAGTGTCGTTG
ACGTTTAGGCGAGTATGCGCCGGCGGAGCGAGTGAAAAGACGGGATCGCA
GCGATCATTGCTTGCGTGATCCATCAAACCCAGGCACTTGAAATAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1528:109491..115036+

>mRNA_F-serratus_M_contig1528.3612.1 ID=mRNA_F-serratus_M_contig1528.3612.1|Name=mRNA_F-serratus_M_contig1528.3612.1|organism=Fucus serratus male|type=CDS|length=1962bp|location=Sequence derived from alignment at F-serratus_M_contig1528:109491..115036+ (Fucus serratus male)
ATGACGAGTCTAGACTTCCACAGCCTACTGAAGCAAGAGAAGACTCTTTG
CCGGTCAGAGCTTGCAGCCGAGACGACACAACGGCAGTCCTCGGAGGCGG
TGCAATTTTGTACCACCACAACGAAGCCGCCACCCTCCTCATCAGCCGCG
TCTGCCGTTCGGGCTAACGATGGCATAGCCGTAGCGAAGGTACATGTGGC
GTCGGGGTTCAGCACTTCCGAAGAAAAGCTGCCAGTGCCATATTTTGCAG
AGCTTGCGGTGCGACCAGCAATCGATATGGAAAAGATGACGAGTCTAGAC
TTCCACAGCCTACTGAAGCAAGAGAAGACTCTTTGCCGGTCAGAGCTTGC
AGCCGAGACGACACAACGGCAGTCCTCGGAGGCGGTGCAATTTTGTACCA
CCACAACGAAGCCGCCACCCTCCTCATCAGCCGCGTCTGCCGTTCGGGCT
AACGATGGCATAGCCGTAGCGAAGGTACATGTGGCGTCGGGGTTCAGCAC
TTCCGAAGAAAAGCTGCCAGTGCCATATTTTGCAGAGCTTGCGGTGCGAC
CAGCAATCGATATGGAAAAGACACGGGTAGGTACCATTCCGACAATTTTC
TACGCTCCCAGCTTCGTGTCCGAGGAGGAAGGGAAGCAAATACTAGCGAG
AACGTACGCCGCTAACGCCCCGGGGAAAACGGATGTCGATTGGGTCAAGC
TGAGGACGCGGCGGCTGAAGTGCTGGGGCGGGCAGCCGGGAAAAGATTTT
CGACTCAAGCCGCTTCCGCCGTGGGTTCAATCGCTGTGCGACGCGTTGGT
TCAAAGTGGGGTGTTTTCGGCGGAAGAAAGGCCAAACCACGTACTCTTGA
ACGACACGGGTAGGTACCATTCCGACAATTTTCTACGCTCCCAGCTTCGT
GTCCGAGGAGGAAGGGAAGCAAATACTAGCGAGAACGTACGCCGCTAACG
CCCCGGGGAAAACGGATGTCGATTGGGTCAAGCTGAGGACGCGGCGGCTG
AAGTGCTGGGGCGGGCAGCCGGGAAAAGATTTTCGACTCAAGCCGCTTCC
GCCGTGGGTTCAATCGCTGTGCGACGCGTTGGTTCAAAGTGGGGTGTTTT
CGGCGGAAGAAAGGCCAAACCACGTACTCTTGAACGAGTACCAGCCGGGC
GAAGGCATAATGCCTCATACGGATGGGCCATTCTACGCGCCGCGCACTGC
GACGCTCAGCCTTGGCAGCGACGCGGTGATGCACTTCTCGCCAAGAGTCA
CCGCGGAGGATATCGGGAAACCTGGAGTAGACTCTAAGCCGCTAGCGTCT
CTCGTGCTTAGGGAGCGTTGTCTCGTGGTGTTTGCCGACGACGCGTACTC
CCGGTTGTTACACGGCATAGATGCACTTAGCGAAGAAACGGTTGGCGCTC
GAAGAGCCCCGGTCATCAACGCAGATGTGGCGGAGGCATCCGAGGGAACC
GTCATTCAACGAAAGTTGAGAGTGTCGTTGACGTTTAGGCGAGTATGCGC
CGGCGGAGCGAGTGAAAAGACGGGATCGCAGCGATCATTGCTTGCGTGAA
GTACCAGCCGGGCGAAGGCATAATGCCTCATACGGATGGGCCATTCTACG
CGCCGCGCACTGCGACGCTCAGCCTTGGCAGCGACGCGGTGATGCACTTC
TCGCCAAGAGTCACCGCGGAGGATATCGGGAAACCTGGAGTAGACTCTAA
GCCGCTAGCGTCTCTCGTGCTTAGGGAGCGTTGTCTCGTGGTGTTTGCCG
ACGACGCGTACTCCCGGTTGTTACACGGCATAGATGCACTTAGCGAAGAA
ACGGTTGGCGCTCGAAGAGCCCCGGTCATCAACGCAGATGTGGCGGAGGC
ATCCGAGGGAACCGTCATTCAACGAAAGTTGAGAGTGTCGTTGACGTTTA
GGCGAGTATGCGCCGGCGGAGCGAGTGAAAAGACGGGATCGCAGCGATCA
TTGCTTGCGTGA
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