mRNA_F-serratus_M_contig1528.3611.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1528.3611.1 vs. uniprot
Match: D7FNH7_ECTSI (Tetracycline-efflux transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH7_ECTSI) HSP 1 Score: 459 bits (1181), Expect = 5.610e-149 Identity = 259/476 (54.41%), Postives = 313/476 (65.76%), Query Frame = 2
Query: 143 RRLTLCLFLSATTTSILSQVYPKIILLHFEGDDRKASNYRGWLATAVSVTQLVFVPVLSSVSDAVGRRAVIAGACVLHGAAAFVLSTTPSSLMWATVLDLVTCVCIVNIPLSQAIMIDIAAGGGRGATHGLGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAALLSLFVLGWEETAPKRVAAS---------EEDDAESDA-------------------------------ETTGSVDG----SDCEQQRGTEGKIRP---KISNPLSIFTVFLESRLLLQIALSYFLFILSLNVFDSGYNYLDFRFHWSSLEISYFLATFNALMALVSGVCIRFIVPRHLSEENGALFGTCIQGCAGVACGLCYRGWMLFPALVFGALQNITEPCLQAIMATFVAKDRQGSLQGAVASLRIIGQGVAAPIFSHTFSAGCTVRFEQAPFFLAAIFSFVSLTITWWPLREMDKRQRTL 1429
R+LT C+ L S+++QVYPKIILL GDD +AS YRGWLA VSV QL+FVP +S SD VGR+AV+ A VLH + L+ SL WATV L T VCIV +P+SQAIMID++ G+GATHGLGIA+GA AL S GDIIGGSL+E +R ACLV+ S A+LLSL + GW ETAP V EE + DA E T SVD D +Q G G+ R K NPLS+ VFLESR LL+IA SYFLF+LSLNVF +GYNY+D+RF W+ EISYF AT+N LMAL G IRFIVP+ L+EE GALFG +Q + + GLC+RGWML+PALVFGALQNITEPCLQAIMATFV + QGSLQGAV SLR++G+GVAAP+F+ FSAG +V FE+APFFLA S VSL + WWPLR++DK + +
Sbjct: 74 RKLTACILLYTIGASMMTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADSLAWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGASALGFSAGDIIGGSLTEHHRGAACLVSAAFSAASLLSLALFGWRETAPPLVGEGWQRWLWWRVEEQERIDDAVVGMNDDDDVGANRGICGRDVAAVVQGGDAVEATASVDSFVWDDDGKQGAGGRGRARRSGRKQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVMVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFSAGASVGFEEAPFFLATAISLVSLAVAWWPLRKLDKTKNIV 549
BLAST of mRNA_F-serratus_M_contig1528.3611.1 vs. uniprot
Match: D7FNH6_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH6_ECTSI) HSP 1 Score: 327 bits (837), Expect = 2.890e-99 Identity = 195/449 (43.43%), Postives = 266/449 (59.24%), Query Frame = 2
Query: 95 SAVNVPQQPIAAAVVRRRLTLCLFLSATTTSILSQVYPKIILLHFEGDDRKASNYRGWLATAVSVTQLVFVPVLSSVSDAVGRRAVIAGACVLHGAAAFVLSTTPSSLMWATVLDLVTCVCIVNIPLSQAIMIDI----AAGGGRGATHGLGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAALLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRPKISNPLSIFTVFLESRLLLQIALSYFLFILSLNVFDSGYNYLDFRFHWSSLEISYFLATFNALMALVSGVCIRFIVPRHLSEENGALFGTCIQGCAGVACGLCYRGWMLFPALVFGALQNITEPCLQAIMATFVAKDRQGSLQGAVASLRIIGQGVAAPIFSHTFSAGCTVRFEQA--------PFFLAAIFSFVSLTITWWPLRE 1405
+A +VP+ VRRRL++CLFL +I+SQVYPK++L HF+ D+ +AS + GWL + QL+ +P L SD +GRRA++AGA L ++F L PSS+ +V +V+ V +P+SQA++ID+ AA GG THGLG+ A LA+SVG ++GGSL+E + AC ++ +S+ +LSL GWEETAP A A ++A G G RG+ +I NP S+ VFLES LL+Q+A+ F LSLNVF YNY DFR+HWS L+IS F +TF L+AL SG+ IRF+VP+ LS G L G +Q + GL +GWM + LV LQ ITEPC+Q +MA V DRQGSLQGAV LR + QG+A ++ FS G + R E A P F A+ +LTI W+ LR+
Sbjct: 35 AATSVPRGLTKGDRVRRRLSVCLFLHIVGVAIISQVYPKVVLEHFDHDNGEASRFTGWLTLVSCIVQLIAIPTLCGASDVIGRRAILAGALALTAVSSFSLGLAPSSIAVVSVCQVVSGVANAILPISQAVVIDLSHWGAAAGGGEVTHGLGLIGAAFGLAVSVGPVLGGSLTEDHAGTACWLSASMSVLGVLSLKFFGWEETAP--AATQGAGGATANASAGG---GWKKLCARGSSSRI----VNPFSVLKVFLESSLLMQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDISLFFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSTRVENALGFVLPGLPLFCASGCGATALTIAWYALRK 474
BLAST of mRNA_F-serratus_M_contig1528.3611.1 vs. uniprot
Match: A0A6H5L7V6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V6_9PHAE) HSP 1 Score: 206 bits (524), Expect = 8.530e-57 Identity = 111/194 (57.22%), Postives = 137/194 (70.62%), Query Frame = 2
Query: 125 AAAVVRRRLTLCLFLSATTTSILSQVYPKIILLHFEGDDRKASNYRGWLATAVSVTQLVFVPVLSSVSDAVGRRAVIAGACVLHGAAAFVLSTTPSSLMWATVLDLVTCVCIVNIPLSQAIMIDIAAGGGRGATHGLGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAALLSLFVLGWEETAPKRV 706
AAA V R+LT C+ L S+++QVYPKIILL GDD +AS YRGWLA VSV QL+FVP +S SD VGR+ V+ A VLH ++ L+ SL+WATV L T VCIV +P+SQAIMID++ G+GATHGLGIA+GA AL S GDIIGGSL+E +R ACLV+ + A+LLSL + GW ETAP V
Sbjct: 28 AAAAVHRKLTACILLYTIGASMMTQVYPKIILLSSGGDDGEASKYRGWLAAGVSVIQLLFVPAISGSSDVVGRKVVVCFAQVLHASSVLALAAMADSLVWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGACALGFSAGDIIGGSLAEHHRGAACLVSAAFATASLLSLMLFGWRETAPPLV 221
BLAST of mRNA_F-serratus_M_contig1528.3611.1 vs. uniprot
Match: A0A835YXD6_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD6_9STRA) HSP 1 Score: 156 bits (394), Expect = 4.600e-36 Identity = 133/475 (28.00%), Postives = 211/475 (44.42%), Query Frame = 2
Query: 185 SILSQVYPKIILLHFEGDDRKASNYRGWLATAVSVTQLVFVPVLSSVSDAVGRRAVIAGACVLHGAAAFVLSTTPSSLMWATVLDLVTCVCIVNIPLSQAIMIDIAAGGGRGATHGLGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSM-----------AALLSLFVL---GWEET-APKRVAASEEDDAESDAETTG--------SVDGSDCEQQR-------GTEGKIRPKISNPLSI------------FTVFLESRLLLQIALSYFLFILSLNVFDSGYNYLDFRFHWSSLEISYFLATFNALMALVSGVCIRFIVPRHLSEENGALFGTCIQGCAGVACGLCYRGWMLFPALVFGALQNITEPCLQAIMATFVAKDRQGSLQGAVASLRIIGQGVAAPIFSHTFSAGCT---------VRFEQAPFFLAAIFSFVSLT--ITWWPLREMDKRQRTLDDGASAD 1450
+I +QVYPK++L ++ GDD K +++ GW++ S+ Q V P L++ D GRR ++ A F+ +P+++ A + ++T +C V IP+SQAI+ D+ G A HG G+ G L L +G ++GG L+ +R AC A G ++ ALL+L V GWEET P AS S + T ++ G+ ++R + + +S PLS A YF ++ F+S Y LD+RF W ++I F A F + V + IR +VPR +++ G IQ G+ +GW L+ AL + A R GSLQGA+ SLRI+ QG+A P++ F+ G + R F AA+ S L ++ P+ + ++ + DD A A+
Sbjct: 202 AIQAQVYPKVVLSYYGGDDGKTASFLGWVSGGSSMLQFVLSPSLTASCDVRGRRGLLLAAAGAQALICFIWGFSPNNIGLAAAVAVITGMCGVVIPVSQAIISDVTRHDGAAAAHGFGVIAGTFGLGLCIGPLLGGWLTNVHRPAACFTAAGAALLAHCWWRWWAGTALLALLVATVWGWEETYVPDAADASRAALRRSMSSTRYHWQVVNPVAIIGTVLHKRRTRRLPSAAQAARAQTVVSGPLSAAGCTRXXXXXXXXXXXXXXXXXXXXACVYFCACTAIGSFNSWYTLLDYRFGWGPVQIGAFCAAFGLGITAVQSLVIRAVVPRLMTQARAVPVGMAIQALGMGLFGIANKGWELYAITPISALSS----------AAATDASRLGSLQGALFSLRILSQGLAGPLYGALFNLGISDALRDALGGTRLPGLAFLAAALASLAGLAFALSVPPVAMLSEKALSGDDAALAE 666
BLAST of mRNA_F-serratus_M_contig1528.3611.1 vs. uniprot
Match: A4YT38_BRASO (Putative tetracycline-efflux transporter n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A4YT38_BRASO) HSP 1 Score: 108 bits (271), Expect = 1.320e-21 Identity = 127/446 (28.48%), Postives = 190/446 (42.60%), Query Frame = 2
Query: 110 PQQPIAAAVVRRRLTLCLFLSATTTSILSQVYPKIILLHFEGDDRKASNYRGWLATAVSVTQLVFVPVLSSVSDAVGRRAVIAGACVLHG---AAAFVLSTTPSSLMWATVLDLVTCVCIVNIPLSQAIMIDIAAGGGRGATHG-LGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMA-ALLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRPKISNPLSIFTVFLESRLLLQIALSYFLFILSLNVFDSGYN-YLDFRFHWSSLEISYFLATFNALMALVSGVCIRFIVPRHLSEENGALFGTCIQGCAGVACGLCYRGWMLFPALVFGALQNITEPCLQAIMATFVAKDRQGSLQGAVASLRIIGQGVAAPIFSHTFS----AGCTVRFEQAPFFLAAIFSFVSLTITWWPLREMDKR 1417
PQ P AV +T+ L + A ++ + PK+I D +A+ G TA ++ QLVF PVL S+SD GRR VI +L AA +VL SL W + L++ V +I + A + D+ R A G +G A+GA + +G GG L + A GLS A AL L VL A +R A R + +NPL + R L ++L F+ L+ V S + Y +R+ W + + LA +V G + FIV R L E + G + GL G + + + AL ++ +QA+M V DRQG LQGA +S++ + Q +F+ TF+ AG + APF LA+ V+L I LR +++
Sbjct: 20 PQAPRRGAVAFIFVTILLDMLAL--GLIMPILPKLIEGFVGNDTAQAARIFGLFGTAWALMQLVFSPVLGSLSDRFGRRPVI----LLSNFGLAADYVLMALAPSLAWLFLGRLISGVTSASISTAFAYISDLTPPDRRAAVFGRIGAAFGAGFV---LGPATGGLLGDIDPRLPFWAAAGLSFANALYGLLVLPESLPAERRSA-------------------------------FRWRAANPLGALRLLRSERTLAGLSLVNFITQLAHVVLPSTFVLYATYRYGWDTRTVGLTLAIVGVCAMVVQGGAVGFIV-RRLGERGALMLGLSAGTVGFLIFGLAPTGMLSWTGIPAMALWGVSGAAIQALMTRLVPPDRQGQLQGATSSVQSMAQLAGPFLFTLTFAYFIGAGAPLHLPGAPFLLASALLIVALVIAVRALRAEERK 424
BLAST of mRNA_F-serratus_M_contig1528.3611.1 vs. uniprot
Match: A0A3D5S9N2_9BACT (Tetracycline resistance MFS efflux pump n=3 Tax=Bacteria TaxID=2 RepID=A0A3D5S9N2_9BACT) HSP 1 Score: 106 bits (265), Expect = 5.920e-21 Identity = 106/411 (25.79%), Postives = 175/411 (42.58%), Query Frame = 2
Query: 188 ILSQVYPKIILLHFEGDDRKASNYRGWLATAVSVTQLVFVPVLSSVSDAVGRRAVIAGACVLHGAAAFVLSTTPSSLMWATVLDLVTCVCIVNIPLSQAIMIDIAAGGGRGATHGL-GIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAA-LLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRP---KISNPLSIFTVFLESRLLLQIALSYFLFILSLNVFDSGYNYLDF-RFHWSSLEISYFLATFNALMALVSGVCIRFIVPRHLSEENGALFGTCIQGCAGVACGLCYRGWMLFPALVFGALQNITEPCLQAIMATFVAKDRQGSLQGAVASLR----IIGQGVAAPIFSHTFSAGCTVRFEQAPFFLAAIFSFVSLTITW 1390
I+ V P +I G AS + GWL A ++ Q V P++ ++SD GRR V+ + + G ++L+ +L W + +V + + + A + DI+A R G+ G A+G L VG +IGG L E + GL + L FVL + R RP + +NP + +++ + +S L ++ + S + Y +F WS E+ Y LA ++ALV GV +R I+ + + + G G + + GWML+ L+ A I P LQ +M+ V + QG LQG + SL ++G + IF + A V APF+LAA+FSF ++ +++
Sbjct: 24 IIIPVVPALITELTGGSISDASIWGGWLMFAYALMQFVCAPIVGALSDQYGRRPVLLLSLLGFGLD-YILAGFAPTLGWLFLARIVAGITGASFTTANAYIADISAPEKRSQNFGMVGAAFG---LGFIVGPLIGGVLGEYGSRVPFFASAGLVLLNWLYGYFVLPESLSKENR----------------------------------RPFSWRRANPWGTLMQLKKYPMVIGLLVSLVLVYIAAHATQSTWTYFTIEKFDWSEAEVGYSLAFVGFMIALVQGVAVRPIINK-IGQARGVYVGLAFNCLGFILIAMSGTGWMLYLVLIPYAFGGIAGPSLQGLMSNSVPANEQGELQGGLTSLMSLTTVVGPPLMTNIFGYFTDASREVYIPSAPFYLAAVFSFTAMLMSY 395
BLAST of mRNA_F-serratus_M_contig1528.3611.1 vs. uniprot
Match: A0A3D1ELS5_9GAMM (Tetracycline resistance MFS efflux pump n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D1ELS5_9GAMM) HSP 1 Score: 101 bits (252), Expect = 2.880e-19 Identity = 113/439 (25.74%), Postives = 182/439 (41.46%), Query Frame = 2
Query: 149 LTLCLFLSATTTSILSQVYPKIILLHFEGDDRKASNYRGWLATAVSVTQLVFVPVLSSVSDAVGRRAVIAGACVLHGAAAFVLSTTPSSLMWATVLDLV-TCVCIVNIPLSQAIMIDIAAGGGRGATHGL-GIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMA-ALLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRPKISNPLSIFTVFLESRLLLQIALSYFLFILSLNVFDSGYNYLDF-RFHWSSLEISYFLATFNALMALVSGVCIRFIVPRHLSEENGAL-FGTCIQGCAGVACGLCYRGWMLFPALVFGALQNITEPCLQAIMATFVAKDRQGSLQGAVASLR----IIGQGVAAPIFSHTFSAGCTVRFEQAPFFLAAIFSFVSLTITWWPLREMDKRQRTLDDG 1438
+T+ LFL ++ ++P +++ GD +S G+L T +V QL+F P+L S+SD GRR V+ + +L S +W L V T + + A++ D++ R GL GIA+G L G +GG L A GL++ + LF L +ET PK +QR T K +NP+ L + FL+ + +VF S +N+ RF WS L++ LA + V G +R+++P+ +E G I GVA L+ + +L +T P +Q+IM + ++ QG LQG +AS+ I+G F++ S + A F AA + +SL I +R+ + R L G
Sbjct: 10 VTITLFLDTVGFGLIIPIFPTLLVEITGGDMASSSAMSGYLTTVFAVAQLLFSPLLGSLSDRFGRRPVLITSLFFLSINFLILGLADS--LWLLFLGRVLTGITAATYATASALIADVSPSSERAQNFGLMGIAFG---LGFICGPALGGVLGSWDVRAPFFAAAGLTLLNTMYGLFFL--QETLPK--------------------------EQRRT---FAWKRANPVGAMRQISRYPALSGLIACMFLYAIGHHVFPSNWNFYTIERFAWSPLDVGLSLAFVGVMAVAVQGGLLRWVIPKFGAERVACFGIGATILAYLGVASAASVT--TLYIWIAISSLGGLTGPAVQSIMTNQLPQNEQGELQGVIASVNSLAMILGPLAITQSFTYFTSPTTPIYLPSAAFLFAAAITVISLGIF---VRQASRLNRLLHSG 407
BLAST of mRNA_F-serratus_M_contig1528.3611.1 vs. uniprot
Match: A0A1D7V275_9LEPT (Tetracycline resistance MFS efflux pump n=7 Tax=Leptospira TaxID=171 RepID=A0A1D7V275_9LEPT) HSP 1 Score: 98.6 bits (244), Expect = 2.880e-18 Identity = 109/413 (26.39%), Postives = 172/413 (41.65%), Query Frame = 2
Query: 188 ILSQVYPKIILLHFEGDDRKASNYRGWLATAVSVTQLVFVPVLSSVSDAVGRRAVIAGACVLHGAAAFVLSTTPSSLMWATVLDLVTCVCIVNIPLSQAIMIDIAAGGGRGATHG-LGIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAA-LLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRPKISNPLSIFTVFLESRLLLQIALSYFLFILSLNVFDSGYNYLDF-RFHWSSLEISYFLATFNALMALVSGVCIRFIVPRHLSEENGALFGTCIQGCAGVACGLCYRGWMLFPALVFGALQNITEPCLQAIMATFVAKDRQGSLQGAVASLR----IIGQGVAAPIFSHTFSAGCTVRFEQAPFFLAAIFSFVSLTITWWPLRE 1405
I+ V PK+I G +A+ Y G+L A S Q + P + +SD GRR V+ + L+ PS + W V LV V + A + DI+ R A G LG A+G L +G ++GGSL + L A GL++ L F+L E+ K E +R K SNP+ +++ + +++FL + + +NY +F W + Y L + A+ G IR I+P L + G + L + WM+F L+ I P LQAIM++ V ++ QG LQGA+ SL IIG + +F++ + +AP ++ A+ + +SL IT LR+
Sbjct: 25 IIIPVLPKLIQELTHGTLSEAALYGGFLMFAYSFMQFICAPFVGGLSDRFGRRPVLLASLFGFTLDYLFLAFAPS-IFWLFVGRLVAGVMGASFTTGYAYIADISPPEKRAANFGILGAAFG---LGFIIGPVLGGSLGQFGSRAPFLAAAGLTLINWLFGFFIL--PESLSK-------------------------ENRR----KFEWAKSNPIGSLISLERYPMIIGLVVAFFLINTAAHAVQGTWNYYTMEKFQWDEAMVGYSLGVVGLVYAITLGGLIRLILPV-LGQNRSIYLGLALSTLGYALFALATKSWMMFVFLIPYCFGGIAMPPLQAIMSSQVPENEQGELQGALTSLMSVTAIIGPILMTGLFAYFTGKDAPMYSPEAPLWMGAVLTALSLWITVGSLRK 401
BLAST of mRNA_F-serratus_M_contig1528.3611.1 vs. uniprot
Match: A0A346YMY6_9HYPH (Tetracycline resistance MFS efflux pump n=2 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A346YMY6_9HYPH) HSP 1 Score: 97.1 bits (240), Expect = 1.090e-17 Identity = 111/426 (26.06%), Postives = 181/426 (42.49%), Query Frame = 2
Query: 137 VRRRLTLC---LFLSATTTSILSQVYPKIILLHFEGDDRK-ASNYRGWLATAVSVTQLVFVPVLSSVSDAVGRRAVIAGACVLHGAAAFVLSTTPSSLMWATVLDLVTCVCIVNIPLSQAIMIDIAAGGGRGATHGL-GIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAALLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRPKISNPLSIFTVFLESRLLLQIALSYFLFILSLNVFDSGYNYLD-FRFHWSSLEISYFLATFNALMALVSGVCIRFIVPRHLSEENGALFGTCIQGCAGVACGLCYRGWMLFPALVFGALQNITEPCLQAIMATFVAKDRQGSLQGAVASLRIIGQGVAAPIFSHTFSA----GCTVRFEQAPFFLAAIFSFVSLTI 1384
VRR L L LFL +I+ V P L GDD A+ GWL S Q +F P+L ++SD GRR ++ A VL A ++ +S V + + + A + DI+ R GL GIA+G + G L E L AG LS+A ++ + L P+ + ++ K +NP + + L FL+ L+ V+ S ++++ +R++WS +I L F A+V G + +VP L E A+ G + ++GW+++ ++ ++N+ +P L++I + V QG LQGA+ SL + + IF+ FSA G V F AP+F+AAIF +++T+
Sbjct: 7 VRRGLFLVFMILFLDIIGIAIIMPVLPTF-LRELTGDDVSGAAVDGGWLLLIYSAMQFLFAPLLGNLSDRFGRRPILL-ASVLTFAVDNLICAAATSFWMLFVGRTLAGISGGSFATCSAYIADISTDETRAKNFGLIGIAFG---VGXXXXXXXXGLLGELGPRAPFLAAGLLSLANFIAAWFL-----LPETL-------------------------EKANRRTFELKRANPFGALKQMRHYPGIGWVMLVMFLYWLAHAVYPSVWSFVSAYRYNWSEGQIGLSLGMFGICAAIVMGFVLPKLVPV-LGEWRTAVLGLSFSCLGLLGYAFAWQGWVVYAVILLTTIENVGDPALRSIASAKVPASAQGELQGAITSLTSLTTIIGPAIFTQLFSAFTGEGAAVEFAGAPYFMAAIFMALAITV 396
BLAST of mRNA_F-serratus_M_contig1528.3611.1 vs. uniprot
Match: A0A6H2DQ69_9SPHN (TCR/Tet family MFS transporter n=1 Tax=Parasphingorhabdus halotolerans TaxID=2725558 RepID=A0A6H2DQ69_9SPHN) HSP 1 Score: 96.7 bits (239), Expect = 1.510e-17 Identity = 107/413 (25.91%), Postives = 191/413 (46.25%), Query Frame = 2
Query: 188 ILSQVYPKIILLHFEGDD-RKASNYRGWLATAVSVTQLVFVPVLSSVSDAVGRRAVIAGACVLHGAAAFVLSTTPSSLMWATVLDLVTCVCIVNIPLSQAIMIDIAAGGGRGATHGL-GIAYGAHALALSVGDIIGGSLSERYRSQACLVAGGLSMAALLSLFVLGWEETAPKRVAASEEDDAESDAETTGSVDGSDCEQQRGTEGKIRPKISNPLSIFTVFLESRLLLQIALSYFLFILSLNVFDSGYNYLDFR-FHWSSLEISYFLATFNALMALVSGVCIRFIVPRHLSEENGALFGTCIQGCAGVACGLCYRG------WMLFPALVFGALQNITEPCLQAIMATFVAKDRQGSLQGAVASLRIIGQGVAAPIFSHTFSAGCTVR-----FEQAPFFLAAIFSFVSLTI 1384
++ V+P++ L+ GD +AS GWLA + Q VF P++ ++SD GRR V+ + + ++ P+ L+W V ++T + + ++ A + D++ R A GL G+A+G + +G +GG L E AGGL++ L+ F + +E+ PK E++R K + + +++ + ++R++L A++ +++L+ V+ + + WS I + LA A+V G IR I+P+ + E N + G G+ G + W++F ALV GALQ + +P + +M+ V+ QG LQGAV+SL I ++ ++ F A T R F PF +A + V+L I
Sbjct: 30 VIMPVFPEL-LVEITGDTVAEASIDAGWLAFTYAAMQFVFSPIIGNLSDKFGRRPVLLATLAGYAISYMLMGLAPT-LLWIFVGRVLTGIMGASFSVANAYIADVSPPDKRAANFGLIGMAFG---VGFIIGPALGGFLGEIGTRVPFFFAGGLALLNLVFGFFM-LKESLPK-------------------------EKRRTFNIK---RANAFVAMKGLSQQNRVVLWYAITIAVWMLAHMVYPIMFAFYAVEALQWSPKMIGFALAMVGLGAAVVQGGLIRVIIPK-VGERNAVIIGV-----FGMVIGTLFYPFAREYPWLVFVALVPGALQGLVQPSVNGLMSKAVSDTTQGELQGAVSSLSSISTMISPLLYPAIFFA-FTARDGLPYFPAVPFVVAGAIALVALAI 401 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1528.3611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1528.3611.1 >prot_F-serratus_M_contig1528.3611.1 ID=prot_F-serratus_M_contig1528.3611.1|Name=mRNA_F-serratus_M_contig1528.3611.1|organism=Fucus serratus male|type=polypeptide|length=561bp MSEDEVETRSAVNVPQQPIAAAVVRRRLTLCLFLSATTTSILSQVYPKIIback to top mRNA from alignment at F-serratus_M_contig1528:98092..104578- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1528.3611.1 ID=mRNA_F-serratus_M_contig1528.3611.1|Name=mRNA_F-serratus_M_contig1528.3611.1|organism=Fucus serratus male|type=mRNA|length=6487bp|location=Sequence derived from alignment at F-serratus_M_contig1528:98092..104578- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1528:98092..104578- >mRNA_F-serratus_M_contig1528.3611.1 ID=mRNA_F-serratus_M_contig1528.3611.1|Name=mRNA_F-serratus_M_contig1528.3611.1|organism=Fucus serratus male|type=CDS|length=3366bp|location=Sequence derived from alignment at F-serratus_M_contig1528:98092..104578- (Fucus serratus male)back to top |