mRNA_F-serratus_M_contig1527.3599.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1527.3599.1 vs. uniprot
Match: D7G9F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F9_ECTSI) HSP 1 Score: 196 bits (499), Expect = 1.490e-50 Identity = 136/378 (35.98%), Postives = 197/378 (52.12%), Query Frame = 2
Query: 617 IAPSRKKAFTRARKAGVTWRLLDGGGVPRNLELNTHGSDDAPIEIDKTILEAVWEEEDNANEDEEEQALLQNDAELKPLASGGGDISPCTSND--GGIAGEPERAGEGDAGRLAAGTQDFMGSPGDNTAPPEWEERKEPRGKLHPVLGELVADLKYKRVYLTSAEALIKAPVWQKANTLFPVRAMEIAEAKYLQEEVIE-GMPGIITLYKRPLQPITEQNQAYTLGIVDGQHRLGAMLLLADKGRWDRTKRNVVIEVFNTKTEEDVAHLFAEINRAEPMQV-VEVPNEGPEQIKESASKAVLQLNQMFPEAFGTKRARPPSVHATGFRENIIKSGLIERHQLFNPKLLLDYLMRVNDIISRREPKMWGNMVGKEEGKY 1738
+ RK +F RAR+AGV R+ +GGGVPR+ + + + E +E +AE P D +P GG + E+ G + + + HPVLG LVADLKYKRVY++S EAL K VW++A TL PV A EI E K ++ + +E ++ +T++NQ Y LG+VDGQHRL A+ +LAD WD ++RNVV+EVF+ K E D+ L+AEINRAEP+Q+ +++P GP+++ + A + VL L ++ I++GLIERH+LF P LLLD+L+RVN+++SRR+ + W MVG EEG Y
Sbjct: 369 VPKERKASFERARRAGVARRIEEGGGVPRDSDSGSGXXXXXEADSXXXXXEGSV---------PDESPFPWKEAETPPFTWQDPD-APVVPKPFLGGSGADGEKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQLQQEEHPVLGCLVADLKYKRVYVSSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVKEDGKEEKDENLLTKRNQQYVLGVVDGQHRLRALKMLADAKMWDHSERNVVVEVFDAKDERDIEELYAEINRAEPVQIDLDIP--GPQEVYKCAEEVVLHLYKL------------------------IRTGLIERHELFTPHLLLDFLLRVNEMMSRRDVQTWALMVGDEEGCY 710
BLAST of mRNA_F-serratus_M_contig1527.3599.1 vs. uniprot
Match: A0A6H5KDW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDW4_9PHAE) HSP 1 Score: 172 bits (435), Expect = 6.950e-42 Identity = 128/326 (39.26%), Postives = 170/326 (52.15%), Query Frame = 2
Query: 617 IAPSRKKAFTRARKAGVTWRLLDGGGVPRNLELNTHGSDDAPIEIDKTILEAVWEEEDNANEDEEEQALLQN-DAEL--KPLASGGGDISPCTSNDGGIAGEPER---AGEGDAGRLAAGTQDFMGSPGDNTAPPEWEERKEPRGKLHPVLGELVADLKYKRVYLTSAEALIKAPVWQKANTLFPVRAMEIAEAKYLQEEVIE-------------------GMPGIITLYKRPLQPITEQNQAYTLGIVDGQHRLGAMLLLADKGRWDRTKRNVVIEVFNTKTEEDVAHLFAEINRAEPMQV-VEVPNEGPEQIKESASKAVLQL 1516
+ RK +F RAR+AGV R+ DGGGVPR+ + + +A E E Q+ DA + KP +G G GG A E G A LAA ER G HPVLG LVADLKYKRVY+TS EAL K VW++A TL PV A EI E K ++ + +E GMPG+ITLY+RPL P+T++NQ+Y LG+VDGQHRL A+ +LAD WD+++RNVVIEVF+ K E D+ L AEP+Q+ +++P GP+++ + A + VL L
Sbjct: 369 VPEERKASFERARRAGVARRIEDGGGVPRDSDSGSGSGSEADSXXXXXXXXXXXXSPFPWKEAETPPFTWQDPDAPVVPKPFLAGSG----ADGEKGGAAAGAEAKITGGXXKASSLAASESSSC-------------ERIVVEG--HPVLGFLVADLKYKRVYVTSLEALEKVRVWEEARTLRPVHAAEIFEGKAIEAQKLEVRRVTEDGKEEKDENLVAKGMPGVITLYRRPLLPLTKRNQSYVLGVVDGQHRLRALKMLADAKMWDQSERNVVIEVFDAKDERDIEEL------AEPVQIDLDIP--GPQEVYKCAEEVVLHL 667
BLAST of mRNA_F-serratus_M_contig1527.3599.1 vs. uniprot
Match: A0A0G4J5N5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J5N5_PLABS) HSP 1 Score: 149 bits (376), Expect = 6.790e-37 Identity = 89/262 (33.97%), Postives = 146/262 (55.73%), Query Frame = 2
Query: 1040 HPVLGELVADLKYKRVYLTSAEALIKAPVWQKANTLFPVRAMEIAEAKYLQEEVIEGMPGIITLYKRPLQPITEQNQAYTLGIVDGQHRLGAMLLLADKGRWDRTKRNVVIEVFNTKTEEDVAHLFAEINRAEPMQVVEVPNEGPEQI-KESASKAVLQLNQMFPEAFG-TKRARPPSVHATGFRENIIKSGLIERHQLFNPKLLLDYLMRVNDIISRREPKMWGNMVGKEEGKYPTKKALGNALRRAKRSKFYLGIDLSWM 1819
HPVLG++ D+ YKRV+ TS AL PVW + TL RA+EI++ +L++ +PG+ITL+++ LG+VDGQHRL A+ LL +G WD N+ +++F + D+A LF++INRAEP+ +V++P G + KE ++A+ Q+ FP F +++ RPP ++ R+ I +S L+++ + N L YL+ N + R W + + +A AL +A+ + YL +D SW+
Sbjct: 46 HPVLGDVARDVTYKRVFFTSISALQGIPVWNRQRTLSQERAVEISQ--HLKQR--PRLPGVITLFEK-----VSSKGVPELGVVDGQHRLAAVQLLVRQGAWDAHNANIAVDLFRVGDDNDIADLFSDINRAEPVLLVDLPESGADDTTKEKLNRAIEQIRAKFPTMFRPSQQCRPPHLNVDVLRDEIWQSDLLDKVPVDN---LSQYLLDANHAMHERTDAQWRKALSGKS------RAFKKALTKARDNACYLALDKSWL 289
BLAST of mRNA_F-serratus_M_contig1527.3599.1 vs. uniprot
Match: A0A5J4YNY4_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNY4_PORPP) HSP 1 Score: 153 bits (386), Expect = 6.810e-36 Identity = 87/262 (33.21%), Postives = 144/262 (54.96%), Query Frame = 2
Query: 1037 LHPVLGELVADLKYKRVYLTSAEALIKAPVWQKANTLFPVRAMEIAEAKYLQEEVIEGMPGIITLYKRPLQPITEQNQAYTLGIVDGQHRLGAMLLLADKGRWDRTKRNVVIEVFNTKTEEDVAHLFAEINRAEPMQVVEVPNEGPEQIKESASKAVLQLNQMFPEAFG-TKRARPPSVHATGFRENIIKSGLIERHQLFNPKLLLDYLMRVNDIISRREPKMWGNMVGKEEGKYPTKKALGNALRRAKRSKFYLGIDLSWM 1819
+H V G + D+ YK++Y+TS E L++ P W K P RA+ +A+ K + +PGIIT Q + I+DGQHR GA+ ++ KG W ++++EVF ++E D LF EIN+AEP++ +++P+ E + + A +L+ +P F ++R R P V+A R + +SG++ER+ ++N + L +L+ +N +S+ + W +V KAL AL +A++ FYLGID SWM
Sbjct: 354 VHKVFGRALHDVGYKQIYMTSVEKLVQVPSWNKNRAYKPNRALAMAKEKIASKST--SLPGIITCC---------QLEGGDTFILDGQHRRGALEIMLRKGAWPAGLESLLVEVFPIRSESDAKALFVEINKAEPVKTIDLPDVASEAVANALLYAAGELSSTYPTMFSDSERCRIPQVNADVLRNELFESGILERYHIYNGEDCLQFLLNMNKKMSKYTDQEWETLV--------KSKALPKALEKARKHDFYLGIDKSWM 596
BLAST of mRNA_F-serratus_M_contig1527.3599.1 vs. uniprot
Match: A0A5J4YPW0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPW0_PORPP) HSP 1 Score: 150 bits (378), Expect = 1.720e-35 Identity = 101/266 (37.97%), Postives = 145/266 (54.51%), Query Frame = 2
Query: 1034 KLHPVLGELVADLKYKRVYLTSAEALIKAPVWQKANTLFPVRAMEIAEAKYLQEEVIEGMPGIITLYKRPLQPITEQNQAYTLGIVDGQHRLGAMLLLADKGRWDRTKRNVVIEVFNTKTEEDVAHLFAEINRAEPMQVVEVP--NEGPEQIKESASKAVLQLNQMFPEAFG-TKRARPPSVHATGFRENIIKSGLIERHQLFNPKLLLDYLMRVNDIISRREPKMWGNMVGKEEGK-YPTKKALGNALRRAKRSKFYLGIDLSWM 1819
+ H G LVADL YK+VYL S E L VW++ P+RA IA+ K +PG+I+ Y+ T GI+DGQHR GA++ +A++ W +K +V++EVF K E+ + LF EIN+AEP+ V++P + E+ KE+ + AV QL F F T R RPP VHA R+ + +S + R+ F K +L+ L+RVN ++ W V K GK Y KKAL ++A + FYLG+D WM
Sbjct: 230 ETHKHFGRLVADLGYKKVYLASIERLRGLDVWRRNRAYRPMRASAIAQDKINSGWRKSVLPGVISCYECASNGET--------GILDGQHRRGALMYMAERSEWPESK-SVLVEVFQLKNEDQIKELFIEINKAEPVLDVDLPGLSVADEEAKEAINYAVGQLEAQFEMMFKQTIRCRPPHVHADKLRDELFQSDFMGRYNAFTGKEVLESLLRVNSEMAECNYSSW---VNKWNGKDYMLKKAL----KKASDTGFYLGVDRQWM 479
BLAST of mRNA_F-serratus_M_contig1527.3599.1 vs. uniprot
Match: A0A7S2XHN0_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XHN0_9EUKA) HSP 1 Score: 145 bits (365), Expect = 7.530e-35 Identity = 94/270 (34.81%), Postives = 143/270 (52.96%), Query Frame = 2
Query: 1016 RKEPRGKLHPVLGELVADLKYKRVYLTSAEALIKAPVWQKANTLFPVRAMEIAEAKYLQEEVIEG-MPGIITLYKRPLQPITEQNQAYTLGIVDGQHRLGAMLLLADKGRWDRTKRNVVIEVFNTKTEEDVAHLFAEINRAEPMQVVEVPNEGPEQIKESASKAVLQLNQMFPEAFG-TKRARPPSVHATGFRENIIKSGLIERHQLFNPKLLLDYLMRVNDIISRREPKMWGNMVGKEEGKYPTKKALGNALRRAKRSKFYLGIDLSWM 1819
RK HPVLG LVADL YK+VY S E+L P+W+K RA +IA+ K ++ V++G PG + Y E Q +G++DGQHRLGA +A G D NV++EVF + LF EIN+AEP++ +++P E IK S AV +L+ F F + + P V+ RE++ ++ + R L + K LL +LM N +++ + W G ++ K + G AL +A+R+ F+LG+D W+
Sbjct: 86 RKAEEANSHPVLGTLVADLGYKKVYRASLESLQNMPMWEKQRAYRDERAKKIAKDK--KDSVVKGGFPGCLVAY--------EFKQTRAIGLLDGQHRLGAQKHMAANGLCDPEANNVLVEVFQFNDGKQADKLFIEINKAEPVKSIDMPGEVNPNIKVSIDDAVDELHDEFKAMFKVSSKCLAPHVNMDVLREDLFEADVCGRFNLKSKKELLAWLMAKNTEMAKLDDAAWEQRRGSKKPK-----SFGKALEKARRNNFFLGMDKQWL 340
BLAST of mRNA_F-serratus_M_contig1527.3599.1 vs. uniprot
Match: W7TLW5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLW5_9STRA) HSP 1 Score: 137 bits (345), Expect = 5.450e-32 Identity = 88/265 (33.21%), Postives = 143/265 (53.96%), Query Frame = 2
Query: 1037 LHPVLGELVADLKYKRVYLTSAEALIKAPVWQKANTLFPVRAMEIA---EAKYLQEEVIEGMPGIITLYKRPLQPITEQNQAYTLGIVDGQHRLGAMLLLADKGRWDRTKRNVVIEVFNTKTEEDVAHLFAEINRAEPMQVVEVPNEGPEQIKESASKAVLQLNQMFPEAFGTK-RARPPSVHATGFRENIIKSGLIERHQLFNPKLLLDYLMRVNDIISRREPKMWGNMVGKEEGKYPTKKALGNALRRAKRSKFYLGIDLSWM 1819
LHPV GELV DL YK++Y TS + L P+W++ RA +A +AK LQE +PG +T+Y+ +G++DGQHRLGA+ LL D G +++EVF K +EDV LF EIN A+P+ ++++P+ KE ++ L F E F R P V+ R+ + KS ++ R N + LL+++ ND+++ R+ W + +G+ P +A+ A+ +A+ + F+LG++ +WM
Sbjct: 106 LHPVFGELVKDLTYKKIYCTSVQKLASIPIWEQQRIYRAERAQLLANDIKAK-LQEGKALTLPGSLTVYE----------MGEEIGLLDGQHRLGALKLLMDSGVLIPEAHLILVEVFPVKAQEDVKRLFTEINTAQPVSIIDMPDMADASEKEIITQTAELLRIEFSEMFKPSVNCRLPHVNIDVLRDGLFKSNVVGRTGTGNAQQLLEWVKAKNDLLAARDDAAW---LRAYKGRKP--EAVEKAVLKARDNHFFLGMEPNWM 354
BLAST of mRNA_F-serratus_M_contig1527.3599.1 vs. uniprot
Match: A0A4D9DI08_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DI08_9STRA) HSP 1 Score: 130 bits (328), Expect = 2.530e-30 Identity = 87/273 (31.87%), Postives = 142/273 (52.01%), Query Frame = 2
Query: 1007 WEERKEPRGKLHPVLGELVADLKYKRVYLTSAEALIKAPVWQKANTLFPVRAMEIAEAKYLQEEVIEGMPGIITLYKRPLQPITEQNQAYTLGIVDGQHRLGAMLLLADKGRWDRTKRNVVIEVFNTKTEEDVAHLFAEINRAEPMQVVEVPNEGPE-QIKESASKAVLQLNQMFPEAFGTK-RARPPSVHATGFRENIIKSGLIERHQLFNPKLLLDYLMRVNDIISRREPKMWGNMVGKEEGKYPTKKALGNALRRAKRSKFYLGIDLSWM 1819
++ + +P HPVLG+L+AD+ YK+VY + L P+W+K L RA IA K Q ++ +PGIITLY+ ++ Y L +DGQHRL A+ +LAD G + ++EVF + E + LF EIN A P++++++P G IK AV L FP F + + P V+ R+ + + ++ERH + LL +L N+ +S + + W + +G+ P + A+ +AK+ F+LG+D W+
Sbjct: 28 FQTKIKPEDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVK-LPGIITLYQLA-------DKQYKL--LDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPEGGARPDIKGIIDGAVDSLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAAELLKWLQDANETLSTKHDRDWKRIF---KGRNPL--VIEKAVAKAKKGGFFLGLDNRWL 285
BLAST of mRNA_F-serratus_M_contig1527.3599.1 vs. uniprot
Match: W7TKX0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKX0_9STRA) HSP 1 Score: 131 bits (330), Expect = 6.640e-30 Identity = 88/273 (32.23%), Postives = 143/273 (52.38%), Query Frame = 2
Query: 1007 WEERKEPRGKLHPVLGELVADLKYKRVYLTSAEALIKAPVWQKANTLFPVRAMEIAEAKYLQEEVIEGMPGIITLYKRPLQPITEQNQAYTLGIVDGQHRLGAMLLLADKGRWDRTKRNVVIEVFNTKTEEDVAHLFAEINRAEPMQVVEVPNEGPE-QIKESASKAVLQLNQMFPEAFGTK-RARPPSVHATGFRENIIKSGLIERHQLFNPKLLLDYLMRVNDIISRREPKMWGNMVGKEEGKYPTKKALGNALRRAKRSKFYLGIDLSWM 1819
++ + +P HPVLG+L+AD+ YK+VY + L P+W+K L RA IA K Q ++ +PGIITLY+ ++ Y L +DGQHRL A+ +LAD G + ++EVF + E + LF EIN A P++++++P+ G IK AV L FP F + + P V+ R+ + + ++ERH + LL +L N+ +S + + W + +G+ P + A+ +AK+ FYLG+D W+
Sbjct: 103 FQTKIKPEDSSHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVK-LPGIITLYQLA-------DKQYKL--LDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPDGGARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIF---KGRNPL--VIEKAVAKAKKGGFYLGLDNRWL 360
BLAST of mRNA_F-serratus_M_contig1527.3599.1 vs. uniprot
Match: A0A7S0ZE62_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE62_9RHOD) HSP 1 Score: 129 bits (325), Expect = 2.840e-29 Identity = 88/273 (32.23%), Postives = 138/273 (50.55%), Query Frame = 2
Query: 1034 KLHPVLGELVADLKYKRVYLTSAEALIKAPVWQKANTLFPVRAMEIAEAKYLQEEVIEGMPGIIT--------------LYKRPLQPITEQNQAYTLGIVDGQHRLGAMLLLADKGRWDRTKRNVVIEVFNTKTEEDVAHLFAEINRAEPMQVVEVPNEGPEQIKESASKAVLQLNQMFPEAFGTK-RARPPSVHATGFRENIIKSGLIERHQLFNPKLLLDYLMRVNDIISRREPKMWGNMVGKEEGKYPTKKALGNALRRAKRSKFYLGID 1807
K HPV GELV DL YK+VY+TS +L VW RA IA+ K + +PGII+ L+ NQ+ T I+DGQHR GA++ ++++ W+ +V++EVF +E LF EIN+ EP++++++P+ G +KE+ + A +L +PE F T R R P ++ FR+ + +S ++ R L +L YL VN + R + W +E + L A+ +AK+ F+LGID
Sbjct: 93 KSHPVFGELVVDLGYKQVYVTSVSSLKGIGVWNLNRAYRQNRAAAIAKDKIASGWRSKVLPGIISCFEFVPRDEAIDKELFTEDESQSKSANQSDTK-ILDGQHRRGALIFMSERKIWEEENASVLLEVFKLCSETGAKQLFTEINKMEPVRLIDLPDMGSIDVKEALNYAAEKLESDYPEMFKTSSRCRIPHLNVDVFRDELFQSDILTRFHLRTGDDVLQYLKNVNKKMEARSLEQW------KEVYKGSASELEKAITKAKKFGFFLGID 358 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1527.3599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1527.3599.1 >prot_F-serratus_M_contig1527.3599.1 ID=prot_F-serratus_M_contig1527.3599.1|Name=mRNA_F-serratus_M_contig1527.3599.1|organism=Fucus serratus male|type=polypeptide|length=583bp MIRQPIRLILAPKAASEALQANARVRLPYRVVNVARSTNGRTSSDTAGTRback to top mRNA from alignment at F-serratus_M_contig1527:51166..58743+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1527.3599.1 ID=mRNA_F-serratus_M_contig1527.3599.1|Name=mRNA_F-serratus_M_contig1527.3599.1|organism=Fucus serratus male|type=mRNA|length=7578bp|location=Sequence derived from alignment at F-serratus_M_contig1527:51166..58743+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1527:51166..58743+ >mRNA_F-serratus_M_contig1527.3599.1 ID=mRNA_F-serratus_M_contig1527.3599.1|Name=mRNA_F-serratus_M_contig1527.3599.1|organism=Fucus serratus male|type=CDS|length=3498bp|location=Sequence derived from alignment at F-serratus_M_contig1527:51166..58743+ (Fucus serratus male)back to top |