mRNA_F-serratus_M_contig1527.3598.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1527.3598.1 vs. uniprot
Match: A0A6H5JID7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID7_9PHAE) HSP 1 Score: 311 bits (796), Expect = 1.100e-93 Identity = 168/304 (55.26%), Postives = 218/304 (71.71%), Query Frame = 1
Query: 397 EVEEAVEVDLKRRKNRGKKIFGLVIACIVIAVIVDLCTHNNVKSWLEEALVWVERNPWGGLVVFALIFCVATLMFIPGLILTIGAGVAFGRAFGFLHGLLCGTVSVLIGAFAACVVAFYMGRYAMHDYVQEYSKRYRVLGAVNKAIETNGIKVMFLLRLSPIVPFSGFNMIAGVTKASFRDYLIGCLGIVPGTIAFVFIGASTAGTMQEEERMDDEGVNTTECIIRMTLFIVGSVAAVAALIAVTVYARRALKEALEDSDEEARTDAMD------TRSDLDTSRSQ-EFKFDTDSNGN*RESGW 1287
EV +AVE D +R + IVD+ H+NV++WLE + W+E NP G+VVFAL+FC++TL+F+PGL+LTIGAGVAFGRA GF G+L G+V+VL+GA ACV+AFY+GRY +H+ Q +KRYR+L AVN AIE NG+KVM LLRLSP+VPFSGFN IAG+TK S RDYL+G +GIVPGT+AFV+IGASTAGTM E+E M+ + TECIIRM IVG+VAAV A++AVT+YARRALK+AL +S+ +A D + + +D++ S EFK DS G+ E W
Sbjct: 48 EVGQAVEKDNERVXXXXXXXXXXXXXXXXXSAIVDIACHDNVRTWLETSFEWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEQEAMNSGEADRTECIIRMATLIVGAVAAVLAIVAVTIYARRALKQALVESELDANADKEEKAEHEGSATDVECGSSPGEFKEAVDSGGSGGERSW 351
BLAST of mRNA_F-serratus_M_contig1527.3598.1 vs. uniprot
Match: D7G9F3_ECTSI (Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F3_ECTSI) HSP 1 Score: 273 bits (697), Expect = 1.550e-80 Identity = 132/210 (62.86%), Postives = 169/210 (80.48%), Query Frame = 1
Query: 397 EVEEAVEVDLKRRKNRGKKIFGLVIACIVIAVIVDLCTHNNVKSWLEEALVWVERNPWGGLVVFALIFCVATLMFIPGLILTIGAGVAFGRAFGFLHGLLCGTVSVLIGAFAACVVAFYMGRYAMHDYVQEYSKRYRVLGAVNKAIETNGIKVMFLLRLSPIVPFSGFNMIAGVTKASFRDYLIGCLGIVPGTIAFVFIGASTAGTMQEE 1026
EV +AVE D +R R K+I V+ +V++ IVD+ H+NV++WLE + W+E NP G+VVFAL+FC++TL+F+PGL+LTIGAGVAFGRA GF G+L G+V+VL+GA ACV+AFY+GRY +H+ Q +KRYR+L AVN AIE NG+KVM LLRLSP+VPFSGFN IAG+TK S RDYL+G +GIVPGT+AFV+IGASTAGTM EE
Sbjct: 48 EVGQAVEKDNERVNQRIKRIMMFVVVALVVSAIVDIACHDNVRTWLETSFDWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEE 257
BLAST of mRNA_F-serratus_M_contig1527.3598.1 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA) HSP 1 Score: 193 bits (491), Expect = 2.050e-51 Identity = 107/272 (39.34%), Postives = 167/272 (61.40%), Query Frame = 1
Query: 427 KRRKNRGKKI-FGLVIACIVIAVIVDLCTHN--NVKSWLEEALVWVERNPWGGLVVFALIFCVATLMFIPGLILTIGAGVAFGRAFGFLHGLLCGTVSVLIGAFAACVVAFYMGRYAMHDYVQEYSKRYRVLGAVNKAIETNGIKVMFLLRLSPIVPFSGFNMIAGVTKASFRDYLIGCLGIVPGTIAFVFIGASTAGTMQEEERMDDEGVNTTEC----------IIRMTLFIVGSVAAVAALIAVTVYARRALKEALEDSDEEARTDAMD 1203
K +K + +K+ GLV+ ++I VIVD + NV L + L WVE NP G+ FA ++ T+ FIPG +LT+GAG+ FGRA G G+ G+ +V++GA ++AF +GRY + D Q +++++ AV+KAIE+ G+K+ LLRLSP+VPF+ FN I G+T S +DY IGCLGI+PGT+A+VFIG+S +G + +++ NT + + + + IVG++A V A+ ++ YA++AL L + + E D D
Sbjct: 18 KGKKEKIRKLCLGLVLVGLIIYVIVDYSVPSLGNVNIVLSDFLAWVEDNPIEGVFAFACVYMFCTVAFIPGSLLTLGAGLVFGRALGIGRGVALGSFAVILGASIGAIIAFILGRYVLQDTAQVLFNKFKIMRAVDKAIESQGLKLCLLLRLSPVVPFNAFNYIMGLTAISLKDYTIGCLGIIPGTVAYVFIGSSASGIGDMKGNDEEQNDNTKDADGEESSSDNDTVFLIVIIVGAIATVIAVFLISWYAKKALNRILNEVELEENQDGKD 289
BLAST of mRNA_F-serratus_M_contig1527.3598.1 vs. uniprot
Match: A0A7S2A6Q3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6Q3_TRICV) HSP 1 Score: 189 bits (480), Expect = 8.800e-50 Identity = 112/277 (40.43%), Postives = 164/277 (59.21%), Query Frame = 1
Query: 430 RRKNRGKKIFGLVIACIVIAVIVDLCTHNNVKSWLEEALVWVERNPWGGLVVFALIFCVATLMFIPGLILTIGAGVAFGRAFGFLHGLLCGTVSVLIGAFAACVVAFYMGRYAMHDYVQEYSKRYRVLGAVNKAIETNGIKVMFLLRLSPIVPFSGFNMIAGVTKASFRDYLIGCLGIVPGTIAFVFIGASTAGTMQEEERMDDEGVNTTECIIRMTLFIVGSVAAVAALIAVTVYARRALKEALED--SDEEARTDAMDTRSDLDTSRSQEFKFDT 1254
+R K I GLV+ +++ +IVD TH VK +E L W+E NP GL VF ++ VAT++F+PG +LT+G+G F +FG G+L T++V +GA +VAF +GRY + D+V+ +K+Y V A++KA+E G+++M LLRLSPI+PF+ N I GVT SF+ Y I+PGTI FVF+GAS AG++ + D V T I+ VG V V A+ + YA++ L + LE +DE RTD + D + R K D+
Sbjct: 40 KRALLNKIIVGLVLVGLIVFIIVDSVTHGFVKGAIEGLLQWIEENPIRGLFVFMAVYFVATVLFVPGSLLTLGSGFVFAESFGLGFGVLLATLAVFVGATLGALVAFILGRYLLRDWVENLTKKYNVFRAIDKALEEKGLRIMILLRLSPIIPFNALNYICGVTSVSFKHYAWANFAILPGTILFVFLGAS-AGSLVDSGNGGDTPVVTIATIV------VGVVFGVIAIALTSRYAKKELNKILEQEKTDETERTDNITDVEDANLQRLDHAKDDS 309
BLAST of mRNA_F-serratus_M_contig1527.3598.1 vs. uniprot
Match: D7FIK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK1_ECTSI) HSP 1 Score: 186 bits (471), Expect = 1.640e-48 Identity = 94/217 (43.32%), Postives = 143/217 (65.90%), Query Frame = 1
Query: 520 VKSWLEEALVWVERNPWGGLVVFALIFCVATLMFIPGLILTIGAGVAFGRAFGFLHGLLCGTVSVLIGAFAACVVAFYMGRYAMHDYVQEYSKRYRVLGAVNKAIETNGIKVMFLLRLSPIVPFSGFNMIAGVTKASFRDYLIGCLGIVPGTIAFVFIGASTAGTMQEEERMDDEGVNTTECIIRMTLFIVGSVAAVAALIAVTVYARRALKEALED 1170
V L L WVE NP G + FAL++ T+ FIPG +LT+GAG+ FGRA G G+L G+++VL GA ++AF +GR+ + + Q +++VL AVN+AI++ G+K++ LLRLSP+VPFS FN + GVT FRDY IGC+G +PGT+AFVFIG + +G + ++ +++ + IVG +A V A++ +++YA+RAL + LE+
Sbjct: 70 VADTLTSFLEWVEDNPGLGALAFALVYVFTTVCFIPGSLLTLGAGLVFGRALGTGLGILVGSLAVLAGATVGSILAFLLGRFVLQEQAQGLFNKFKVLKAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTDVFFRDYAIGCVGFIPGTVAFVFIGTTASGLLGDDSEEXXXXXXXXXGTVQLIVGIVGGIATVIAVVLISIYAKRALNKVLEE 286
BLAST of mRNA_F-serratus_M_contig1527.3598.1 vs. uniprot
Match: A0A6U4ITL6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4ITL6_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.990e-45 Identity = 108/262 (41.22%), Postives = 155/262 (59.16%), Query Frame = 1
Query: 400 VEEAVEVDLKRRKNRGKKIF-GLVIACIVIAVIVDLCTHNNVKSWLEEALVWVERNPWGGLVVFALIFCVATLMFIPGLILTIGAGVAFGRAFGFLHGLLCGTVSVLIGAFAACVVAFYMGRYAMHDYVQEYSKRYRVLGAVNKAIETNGIKVMFLLRLSPIVPFSGFNMIAGVTKASFRDYLIGCLGIVPGTIAFVFIGASTAGTMQEEERMDDEGVNTTECIIRMTLFIVGSVAAVAALIAVTVYARRALKEALEDSDEE 1182
+EE E + R+K R KKI GL++ IVI +IVD T+ V ++ L W E NP GL F ++ +AT+MF+PG ILT+GAG F AFG G+L TV+V GA A + AF +GRY + +V ++ +Y++ A++KA+ETNG ++M LLRLSP++PF+ N IAGVT SF Y L I+PGTI F F+GA TAG++ D G + V A++ V+ YA++ L + LE+ +EE
Sbjct: 62 IEEDPEANATRKKARVKKIIIGLILLGIVIYIIVDSTTNRYVAQGIQIFLKWFEDNPVAGLFAFMGVYFLATVMFVPGSILTLGAGFVFANAFGLGWGVLLATVAVFCGAVAGDLTAFLLGRYLLRGWVLGWTDKYKIFKAIDKALETNGFRIMSLLRLSPVIPFNAINYIAGVTAISFSAYAWANLFILPGTILFCFLGA-TAGSLA------DSGASXXXXXXXXXXXXXXXXFGVLAIVVVSFYAKKELNKILEEQNEE 316
BLAST of mRNA_F-serratus_M_contig1527.3598.1 vs. uniprot
Match: A0A7S2MII1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MII1_9STRA) HSP 1 Score: 174 bits (442), Expect = 6.500e-45 Identity = 96/254 (37.80%), Postives = 154/254 (60.63%), Query Frame = 1
Query: 427 KRRKNRGKKI-FGLVIACIVIAVIVDLCTHNNVKSWLEEALVWVERNPWGGLVVFALIFCVATLMFIPGLILTIGAGVAFGRAFGFLHGLLCGTVSVLIGAFAACVVAFYMGRYAMHDYVQEYSKRYRVLGAVNKAIETNGIKVMFLLRLSPIVPFSGFNMIAGVTKASFRDYLIGCLGIVPGTIAFVFIGASTAGTMQEEERMDDEGVNTTECIIRMTLFIVGSVAAVAALIAVTVYARRALKEALEDSDEEA 1185
++RK R KI GL++ +I VIVD T ++++ +E L W+E NP G+ F ++ VAT++F PGLILT+GAG F A G G++ T +V +GA + AF +GRY + D+V +K+Y + AV+ A++ G+++M LLRLSP++PF+ N I GVT SFRD+ I +GI+PGT+ +VF+G+S AG++ + D +R+ ++GSV + + + YAR+ L+ + + EA
Sbjct: 24 EKRKARLIKIALGLLLVGFIIYVIVDFATSKHLRTAMESFLNWIEDNPTEGVFAFMGVYFVATILFAPGLILTLGAGFVFANALGLGLGVVLATTAVFVGASTGSMAAFLIGRYLLRDWVVGLTKKYAIFEAVDVALKEKGLRIMILLRLSPLIPFNALNYIVGVTSVSFRDFTIAMIGILPGTLLYVFLGSS-AGSLTDSSSGGDNSA------VRILTIVLGSVFGILGVCVTSYYARKELQNVISRREAEA 270
BLAST of mRNA_F-serratus_M_contig1527.3598.1 vs. uniprot
Match: A0A7S1CUZ4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CUZ4_CYCTE) HSP 1 Score: 173 bits (439), Expect = 1.320e-43 Identity = 98/284 (34.51%), Postives = 166/284 (58.45%), Query Frame = 1
Query: 316 WRRPKAEEDKRPPMIPEDGLVAIEKRTEVEEAVEVDLKRRKNRGKK-IFGLVIACIVIAVIVDLCTHNNVKSWLEEALVWVERNPWGGLVVFALIFCVATLMFIPGLILTIGAGVAFGRAFGFLHGLLCGTVSVLIGAFAACVVAFYMGRYAMHDYVQEYSKRYRVLGAVNKAIETNGIKVMFLLRLSPIVPFSGFNMIAGVTKASFRDYLIGCLGIVPGTIAFVFIGASTAGTMQEEERMDDEGVNTTECIIRMTLFIVGSVAAVAALIAVTVYARRALKEAL 1164
W++P+ P + ++ + TE +E + R++N +K + G+ + +I V++D T NV+S + L W+E NP G F +++ VAT++F+PG +LT+G+G F AFG G+L G++SV +GA + +VAF +GRY + ++VQ +K+Y V A++ A+E G ++M LLRLSPI+PF+ N I GVT SF + + I+PGT+ +VF+GAS AG++ + + G I + + +VG V +AA+ + YA++ L +
Sbjct: 98 WQQPRRSRSHVPQDDRFESMLRASEETEDDEGRQ----RKQNCWQKLVIGIFLLGFIIYVVIDSFTAGNVRSAIGSFLTWIENNPIPGFFAFMVVYFVATILFVPGSLLTLGSGFVFANAFGLGPGVLIGSLSVFLGASSGAIVAFLLGRYLLREWVQGLTKKYAVFEALDIALEEKGFRIMALLRLSPIIPFNAINYIGGVTAISFYANALALIVIIPGTVLYVFLGAS-AGSLADSASSGESGP------ITIIVVVVGCVFGLAAIFLTSYYAKKELNRVI 370
BLAST of mRNA_F-serratus_M_contig1527.3598.1 vs. uniprot
Match: A0A7S4W131_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W131_9STRA) HSP 1 Score: 171 bits (432), Expect = 2.290e-43 Identity = 97/257 (37.74%), Postives = 152/257 (59.14%), Query Frame = 1
Query: 457 FGLVIACIVIAVIVDLCTHNNVKSWLEEALVWVERNPWGGLVVFALIFCVATLMFIPGLILTIGAGVAFGRAFGFLHGLLCGTVSVLIGAFAACVVAFYMGRYAMHDYVQEYSKRYRVLGAVNKAIETNGIKVMFLLRLSPIVPFSGFNMIAGVTKASFRDYLIGCLGIVPGTIAFVFIGASTAGTMQEEERMDDEGVNTTECIIRMTLFIVGSVAAVAALIAVTVYARRALKEALEDSDEEARTDAMDTRSDLDTS 1227
FGL++ +I VI+DL T N + + L W+E NP G+ F ++ +A++ FIPGLILT+GAG F A G G+ TV+V GAF +F +GRY + D V + +K+ + A++ A++ G+++M LLR+SP+VPF+ FN +AGVT S RDY IG +GI+PGT+ ++ +G+S AG++ D + + +R+ ++G V AV + A T YA++ L + L S A T D+D+S
Sbjct: 32 FGLILVGFIIYVIIDLATTKNTMRIVADFLDWIEDNPAAGVFAFIGVYIIASIFFIPGLILTLGAGFVFANALGLGVGIFLATVAVFFGAFFGACASFLIGRYLLRDCVGKLTKKRVIFEAIDAALKDKGLRIMILLRVSPLVPFNVFNYVAGVTSISLRDYAIGMIGILPGTLLYILLGSS-AGSLV------DSSSSGNDSTVRIISIVLGIVFAVLGVYATTYYAKKELNKIL--SQRREVNAAASTEGDVDSS 279
BLAST of mRNA_F-serratus_M_contig1527.3598.1 vs. uniprot
Match: A0A7S2JYW7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JYW7_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.450e-43 Identity = 101/253 (39.92%), Postives = 153/253 (60.47%), Query Frame = 1
Query: 448 KKIFGLVIACIVIAVIVDLCTHNN-VKSWLEEALVWVERNPWGGLVVFALIFCVATLMFIPGLILTIGAGVAFGRAFGFLHGLLCGTVSVLIGAFAACVVAFYMGRYAMHDYVQEYSKRYRVLGAVNKAIETNGIKVMFLLRLSPIVPFSGFNMIAGVTKASFRDYLIGCLGIVPGTIAFVFIGASTAGTMQEEERMDDEGVNTTECIIRMTLFIVGSVAAVAALIAVTVYARRALKEALEDSDEEARTDAMD 1203
K + G ++ + VIVD + + V S +E+ L WVE NP G+ F ++ VAT++FIPG ILT+GAG F AFG G+L +++V +GA + + +F +GRY + D+V + +Y++ GA++ A+ NG K+M LLRLSPI+PF+ N IAGVT SFRD + L I+PGT+ +VF+G+S AG++ + E D+ T II + IV + +AA + YA++ L + D E R DA D
Sbjct: 21 KLLIGSILLAFIAYVIVDSASGDGRVTSTVEDFLDWVEDNPAEGVFAFIGVYFVATVLFIPGTILTLGAGFVFSSAFGLGVGVLLASIAVFVGASSGALASFLLGRYLLRDWVMTLTSKYQLFGAIDTALTNNGFKIMSLLRLSPIIPFNALNYIAGVTSVSFRDNALALLFILPGTVMYVFLGSS-AGSLSDSESSGDDQTTT---IITVVFGIVFGLLGIAAT---SYYAKKELNAVIAQQDGE-RVDAED 265 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1527.3598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1527.3598.1 >prot_F-serratus_M_contig1527.3598.1 ID=prot_F-serratus_M_contig1527.3598.1|Name=mRNA_F-serratus_M_contig1527.3598.1|organism=Fucus serratus male|type=polypeptide|length=364bp MSSVGRQGHNVSKNVDPGSTLDKTVDSSWEVKGKGRNLLFLSGWRWRRPKback to top mRNA from alignment at F-serratus_M_contig1527:42473..50996- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1527.3598.1 ID=mRNA_F-serratus_M_contig1527.3598.1|Name=mRNA_F-serratus_M_contig1527.3598.1|organism=Fucus serratus male|type=mRNA|length=8524bp|location=Sequence derived from alignment at F-serratus_M_contig1527:42473..50996- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1527:42473..50996- >mRNA_F-serratus_M_contig1527.3598.1 ID=mRNA_F-serratus_M_contig1527.3598.1|Name=mRNA_F-serratus_M_contig1527.3598.1|organism=Fucus serratus male|type=CDS|length=2184bp|location=Sequence derived from alignment at F-serratus_M_contig1527:42473..50996- (Fucus serratus male)back to top |