mRNA_F-serratus_M_contig1524.3593.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1524.3593.1 vs. uniprot
Match: A0A6H5J8X6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8X6_9PHAE) HSP 1 Score: 139 bits (349), Expect = 1.560e-38 Identity = 75/97 (77.32%), Postives = 85/97 (87.63%), Query Frame = 2
Query: 347 MRGMGKGELLDLLAKEGVAAADQLRKDRAEARDAREMVAATRKALAAASTQGRTNEGRRTFQTILTACSFDGDG---PSRVTAKRKAELLGVHPDHL 628
MR M +GELLD LA +GVAAAD LRK++A+ARDAR+MVA T+KALAAASTQGRTNEGRRTFQTILTA +FDGD PSRVT+KRKAELLGVHP+H
Sbjct: 1 MRSMAEGELLDFLAGQGVAAADLLRKEQADARDARKMVAGTKKALAAASTQGRTNEGRRTFQTILTAAAFDGDDGDEPSRVTSKRKAELLGVHPEHF 97
BLAST of mRNA_F-serratus_M_contig1524.3593.1 vs. uniprot
Match: A0A6H5KDQ3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ3_9PHAE) HSP 1 Score: 146 bits (368), Expect = 7.430e-37 Identity = 79/101 (78.22%), Postives = 89/101 (88.12%), Query Frame = 2
Query: 335 FLAAMRGMGKGELLDLLAKEGVAAADQLRKDRAEARDAREMVAATRKALAAASTQGRTNEGRRTFQTILTACSFDGDG---PSRVTAKRKAELLGVHPDHL 628
FLAAMR M +GELLD LA +GVAAAD LRK++A+ARDAR+MVA T+KALAAASTQGRTNEGRRTFQTILTA +FDGD PSRVT+KRKAELLGVHP+H
Sbjct: 151 FLAAMRSMAEGELLDFLAGQGVAAADLLRKEQADARDARKMVAGTKKALAAASTQGRTNEGRRTFQTILTAAAFDGDDGDEPSRVTSKRKAELLGVHPEHF 251
BLAST of mRNA_F-serratus_M_contig1524.3593.1 vs. uniprot
Match: A0A6H5JJC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC8_9PHAE) HSP 1 Score: 108 bits (269), Expect = 6.480e-25 Identity = 59/98 (60.20%), Postives = 76/98 (77.55%), Query Frame = 2
Query: 335 FLAAMRGMGKGELLDLLAKEGVAAADQLRKDRAEARDAREMVAATRKALAAASTQGRTNEGRRTFQTILTACSFDGDGPSRVTAKRKAELLGVHPDHL 628
F+AAMR M ELL LA+ V AAD+LR+ + +ARE+ +A R+AL A+ QGRT EGRRTFQT+LTA ++DGDGPS+VTAKRK+E+ GVHP+HL
Sbjct: 155 FVAAMRAMTTTELLRCLAELKVPAADKLRE---QLEEARELQSACRRALKDAAIQGRTKEGRRTFQTLLTAVAYDGDGPSKVTAKRKSEIFGVHPEHL 249
BLAST of mRNA_F-serratus_M_contig1524.3593.1 vs. uniprot
Match: A0A6H5JIQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ3_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.470e-21 Identity = 54/98 (55.10%), Postives = 74/98 (75.51%), Query Frame = 2
Query: 335 FLAAMRGMGKGELLDLLAKEGVAAADQLRKDRAEARDAREMVAATRKALAAASTQGRTNEGRRTFQTILTACSFDGDGPSRVTAKRKAELLGVHPDHL 628
F+AAMR M ELL LA+ V AAD+LR+ + +AR++ +A R+AL A+ QGR EGRR FQT+LTA ++DG+GPS+VTAKRK+E+ G+HP+HL
Sbjct: 44 FVAAMRAMTTTELLRCLAELKVPAADKLRE---QLEEARKLQSACRRALKDAAIQGRAKEGRRAFQTLLTAVAYDGNGPSKVTAKRKSEIFGIHPEHL 138
BLAST of mRNA_F-serratus_M_contig1524.3593.1 vs. uniprot
Match: A0A6H5JIF1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIF1_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 2.780e-21 Identity = 62/106 (58.49%), Postives = 75/106 (70.75%), Query Frame = 1
Query: 10 RGVELTTKLIDPKGGKKGA-AATNTGSCEASEGALSTLALEKAEAIMAGKREAARRQGVPQSGG-GRSWADNQMCCPVIASIKGSYEGEGTRTRNAASNAGAAAGP 321
RG++L T L+D K +KG AA NTG CEASE LS LA EKA+AIMAGKR AAR+ G+PQ GG G AD M CPVIA+I+GS+EG RTR++A+ AA P
Sbjct: 37 RGIKLRTTLLDSK--RKGRKAAENTGYCEASEVVLSNLAREKADAIMAGKRNAARKNGIPQGGGSGGCGADRVMSCPVIAAIQGSHEG--LRTRSSATTNPAANNP 138
BLAST of mRNA_F-serratus_M_contig1524.3593.1 vs. uniprot
Match: A0A6H5JIB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB0_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 5.770e-20 Identity = 65/117 (55.56%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 10 RGVELTTKLIDPKGGKKGA-AATNTGSCEASEGALSTLALEKAEAIMAGKREAARRQGVPQSGG-GRSWADNQMCCPVIASIKGSYEGEGTRTRNAASNAGAAAGPTEVTVSCCDER 354
RG++L T L+D K +KG AA NTG CEASE LS LA EKA+AIMAGKR AAR+ G+PQ GG G AD M CPVIA+I+GS+EG RTR++A+ AA P V C + R
Sbjct: 37 RGIKLRTTLLDSK--RKGRKAAENTGYCEASEVVLSNLAREKADAIMAGKRNAARKNGIPQGGGSGGCGADRVMSCPVIAAIQGSHEG--LRTRSSATTNPAANNPE---VKCVETR 146
BLAST of mRNA_F-serratus_M_contig1524.3593.1 vs. uniprot
Match: A0A6H5JR76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR76_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 6.910e-16 Identity = 50/80 (62.50%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 1 KAGRGVELTTKLIDPKGGKKGAAATNTGSCEASEGALSTLALEKAEAIMAGKREAARRQGVPQSGGGRSWADNQMCCPVI 240
K GRGVE+TTKL DPK K+ AAA N+G+ EA E LS +A EKA+ IM GKREAARR GVPQ+ G AD+ M CPVI
Sbjct: 104 KEGRGVEITTKLFDPKAVKR-AAARNSGTSEACEADLSKVAREKADEIMKGKREAARRAGVPQARGQGGGADSHMSCPVI 182
BLAST of mRNA_F-serratus_M_contig1524.3593.1 vs. uniprot
Match: A0A6H5KYP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP1_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 3.130e-15 Identity = 49/80 (61.25%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 1 KAGRGVELTTKLIDPKGGKKGAAATNTGSCEASEGALSTLALEKAEAIMAGKREAARRQGVPQSGGGRSWADNQMCCPVI 240
K GRGVE+TTKL D K GK+ AAA N+G+ EA E LS +A EKA+ IM GKRE ARR GVPQ+ G AD+ M CPVI
Sbjct: 35 KEGRGVEITTKLFDLKAGKR-AAARNSGTSEACEADLSKVAREKADKIMKGKREGARRAGVPQARGRGGGADSHMSCPVI 113
BLAST of mRNA_F-serratus_M_contig1524.3593.1 vs. uniprot
Match: A0A6H5JIV9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIV9_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 5.030e-14 Identity = 45/92 (48.91%), Postives = 66/92 (71.74%), Query Frame = 2
Query: 347 MRGMGKGELLDLLAKEGVAAADQLRKDRAEARDAREMVAATRKALAAASTQGRTNEGRRTFQTILTACSFDGD-GPSRVTAKRKAELLGVHP 619
M+ M LL L++EG+ AA +L++ + + DAR+ AA+R+AL A+ GRTN+GR+T+QTILTAC++DGD G + + RKAE+LGV P
Sbjct: 1 MKSMTSEALLACLSQEGIPAAQELQELQLQLEDARQFQAASREALKDAAVFGRTNQGRQTYQTILTACAYDGDEGTQALPSYRKAEILGVDP 92
BLAST of mRNA_F-serratus_M_contig1524.3593.1 vs. uniprot
Match: A0A6H5KIV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIV8_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 3.330e-10 Identity = 45/92 (48.91%), Postives = 59/92 (64.13%), Query Frame = 2
Query: 347 MRGMGKGELLDLLAKEGVAAADQLRKDRAEARDAREMVAATRKALAAASTQGRTNEGRRTFQTILTACSFDGD-GPSRVTAKRKAELLGVHP 619
M+ M LL L GV AA ++ ++ A DAR+ AA+R AL A+ GRTN GR+T+QTILTA ++DGD G S + RKAE+LGV P
Sbjct: 1 MKAMNAETLLQSLIDNGVPAAQEIHQELA---DARQFQAASRAALKDAAVFGRTNMGRQTYQTILTAHAYDGDEGASTLPGYRKAEILGVDP 89 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1524.3593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1524.3593.1 >prot_F-serratus_M_contig1524.3593.1 ID=prot_F-serratus_M_contig1524.3593.1|Name=mRNA_F-serratus_M_contig1524.3593.1|organism=Fucus serratus male|type=polypeptide|length=123bp KAGRGVELTTKLIDPKGGKKGAAATNTGSCEASEGALSTLALEKAEAIMAback to top mRNA from alignment at F-serratus_M_contig1524:193345..194365- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1524.3593.1 ID=mRNA_F-serratus_M_contig1524.3593.1|Name=mRNA_F-serratus_M_contig1524.3593.1|organism=Fucus serratus male|type=mRNA|length=1021bp|location=Sequence derived from alignment at F-serratus_M_contig1524:193345..194365- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1524:193345..194365- >mRNA_F-serratus_M_contig1524.3593.1 ID=mRNA_F-serratus_M_contig1524.3593.1|Name=mRNA_F-serratus_M_contig1524.3593.1|organism=Fucus serratus male|type=CDS|length=738bp|location=Sequence derived from alignment at F-serratus_M_contig1524:193345..194365- (Fucus serratus male)back to top |