mRNA_F-serratus_M_contig1524.3591.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1524.3591.1 vs. uniprot
Match: D7FSD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSD2_ECTSI) HSP 1 Score: 444 bits (1142), Expect = 1.450e-132 Identity = 396/1194 (33.17%), Postives = 563/1194 (47.15%), Query Frame = 3
Query: 234 LLGERTYSLLLCEREVSWDRTQASPMVPPISSLGSPWRGTS--NNAGSSGVEPAGIGMVGQES--------VNHHLAREGHEHGQQTEDXXXXXXXXXXXXXXXXXXXXXXXXDMVKXXXXXXXXVESKMKIVAFVRRMAGDGMIDDEDQNALESAANEGDAVVHTAFSVAVRSQDLDYLAALLKDIAANKRDAPKGVRLLKAKGEMLGTAKVLRQAEEVDDEQLAFLQNLILVSNEGVTTAFQAYQKNQDPESLAESLRELCGAGANMKEAVVATAARGAAGQVVSVPEMTTVTTNATSNATKADALAGDTSRAEQDTMKATLLKVAVNTASKGLLGALEARILREMVFQENPVLMAAFKVYQEDGNVAELQDTVARAARIEAKRIIGASPSRMSISSPNE-RMSRIFSPVTFDRPSLLPQANALVSEAVEDI------GKRDASASPKTAAGGASRAGRGGSWVGAGRGSS-REFCRILGIGVRKGIVDIGDARVLYAAFESPPGEGNGHAGHPDXXXXXXLRGLVHAAWEVFESGRDEEELVESLGQITRLAVTPFKSSLGGRSAKSLRTHSLNASQNGSDVRVPATSPDLFVTELSAAELEARTEVAVRGIAAQSANLLLHTKLVSMEEASCLASPSPAGRRAILDVLKNFEGDASRDKLLDGLSVIAKAEKANRQGRSQPPPLLPLPQPPTPSKLGESKP--------------NDQQTDGEQARMEKETDENDVRKEEEEGSCYQGQQVEKERVRMELMELVVCMVEDERIGAEEAYRLTSYIEQGNPRILAAYKEHVDNQDLDALVAALVSAVRSAPEASSTARSPADEAVQERTDDGKNNNSQSAEDGGSQHQQRQLERERVVLL----MHETQVLNASDATRLLSLLGRQDSRTLEAFHAFECSKNVPALVETVNIIVNQAPAASASDLVLLQ----GKEDPGQPLSPLREILDKPAEDLLSTHARDEASKGESSNNXXXXXXXXXXXXXXGVLGVAKTVLSIVEGMRLDEREAAALRRAISCGDANVKGALELFKLDSDARELKDTLARVARHVLERE--------VAKKAEASEEGSCERPASSNDGSAPRTLGPVDQTRNMKMNSAEDLTAEGNESVLQTVLHQLCTMGAMTEAQSSAVMERYIEKDAAVLAALDAYNNKQKHKKHKNQNDMSELVDTLKSL 3671
+LG+R+YSLLL ++EVSW R ++ P +P + GSP G S + S E G+G G + ++G G++ E D+ + + K +IVAF+RRM +G++ ++D+ ALE++A GDAV++ AF+VA+RSQD+DYL+AL KDIA+N+R +P+G+RLL+AK EML +VL+QA+EVDDEQL +LQNLILVSNE V+ AF Y+++QDP LAESL++LCGA ++ V AA A + T A + D M+AT+LKVA N ++ LLG EA +L M+ +ENPVL+AAFK+++E+G AEL DTVARAAR E R+ G S SR S N +++ + R + A A + G R T GA+ A G GA R ++ EF R++ + V+K ++D+ DARV S EEA CLA+PSP +AIL L+ FEG ++RD+LL+ + IAKAE R G+ + GE N+ + DGE+ R++ +V +R +ELMEL CM D+ IGA+EA L IE P ++ AY+++ +QD+ ALV+AL++ V T G+ E GG + + Q MH+T+VL ASDATRLL LL ++D +L AF AF+ SK+V +LVE + I+ AP + + L + G+ + Q L+ + + L +D ++ D +++ +S NN + VA+ V+SIV+GM LDE EAAALR AI+ GD N+KGALELF+LDSDA+EL+DT ARVAR VLERE V + A E SC+ S+ND + T ++TRN+ D T +G + Q +L QL +G M+EAQ+ +M+RY KDA V AALD Y KN+NDMSELVDTLK L
Sbjct: 1 MLGDRSYSLLLSDKEVSWKRNKSHPGIPSTPTQGSPLGGASPISVTAFSSAEAIGVGAGGGQKSACGTLWGAEGETEKQGWRPGEEEE-------------------------DVEEDEDGEAKGMGDKARIVAFIRRMTFNGLLAEDDRTALENSAVAGDAVINAAFAVALRSQDVDYLSALFKDIASNRRGSPQGMRLLEAKREMLDMVEVLQQADEVDDEQLVYLQNLILVSNEAVSDAFGVYEEDQDPVRLAESLKQLCGA----QDGAVKPAAVAAVSXXXXXXXNDVLKTEA-----------------DHDAMQATILKVATNLTNESLLGPREASVLNTMISRENPVLVAAFKLFRENGKAAELYDTVARAARFETGRVAGQSGSRGEQESGNAGQVAGSSQRLQVTRKASAAAAXXXXXXAAAGLDDTRGKGGRACRVGAPTRDSGATTADEDGVGEGADRAAALMEFQRLVTLAVQKDMMDMCDARV------------------------------------------------------------------------------------------------------------------------------------SREEALCLATPSPGCTQAILKSLEEFEGSSNRDRLLNAFAGIAKAEMLKRNGKDR---------------EGEDXXXXXXXXXXXXXXXXNNSEQDGEE-RLDXXX------------XXXXXXEVSDDRAMVELMELADCMAGDKSIGAQEAALLAKLIENKYPPVIQAYEDYAASQDVGALVSALMAIVG--------------------TQGGEQ------EVGGMEEPRAQXXXXXXXXXXXXXMHDTKVLTASDATRLLLLLAQEDPNSLAAFEAFDSSKDVSSLVEAIKTILQDAPPIAPAMLTMEAHPDGGRSNSSQLLTQILQPLPDANDDAATSEDSDGSARLDSGNNAANIEMGEDGGSDADAV-VAENVVSIVDGMGLDESEAAALRLAIANGDVNMKGALELFRLDSDAQELEDTFARVARLVLEREHESRLTGQVPDASRAMGENSCD---SNNDVA---TANSGEETRNI------DFTLDGKAGLFQELLQQLERVGVMSEAQAVVIMDRYRSKDAVVFAALDVY---------KNENDMSELVDTLKRL 940
BLAST of mRNA_F-serratus_M_contig1524.3591.1 vs. uniprot
Match: A0A835ZLI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLI9_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.250e-28 Identity = 321/1410 (22.77%), Postives = 531/1410 (37.66%), Query Frame = 3
Query: 33 EAQFVRVTHAEQGYFVALYAGLNPQELCRLLQAAFRITPT-VVGLVDKDSHIGQGIVVPISLACRAPQLLGERTYSLLLCEREVSWDRTQASP------------MVPPISSLGSPWRGTSNNAGSSGVEPAGIGMVGQESVNH----------------------------HLAREGHEHGQQTEDXXXXXXXXXXXXXXXXXXXXXXXXDMVKXXXXXXXXVESKMKIVAFVRRMAGDGMIDDEDQNALESAANEGDAVVHTAFSVAVRSQDLDYLAALLKDIAANKRDAPKGVRLLKAKGEMLGTAKVLRQAEEVDDEQLAFLQNLILVSNEGVTTAFQAYQKNQDP-------ESLAESLRELCGAGANMKEAVVATAARGAAGQVVSVPEMTTVTTNATSNATKADALAGDTSRAEQDTMKATLLKVAVNTASKGLLGALEARILREMVFQENPVLMAAFKVYQEDGNVAELQDTVARAARIEAKR------IIGASPSRMSISSPNERMSRIFSPVTFDRPSLLPQANALVSEAVEDIGKRDASASPKT----------------------------AAGGASRAGRGGSWVGAGRGSSREFCRILGIGVRKGIVDIGDARVLYAA-----FESPPGEG--NGHAGHPDXXXXXXLRGLVHAAWEVFESGRDEEELVESLGQITRLAVTPFKSSLGGRSAKSLRTHSLNASQNGSDVRVPATSPDLFVTELSAAELEARTEV---AVRGIAAQSANLLLHTKLVSMEEASCLASPSPAGRRAILDVLKNFEGDASRDKLLDGLSVIAKAEK----ANRQGRSQPPPLLPLPQPPTPSKLGESKPNDQQTDGEQARMEKETDENDVRKEEEEGSC-YQGQQVEKERVRMELMELVVCMVEDERIGAEEAYRLTSYIEQGNPRILAAYKEHVDNQDLDALVAALVSAVRSAPEASSTARSPADEAVQERTDDGKNNNSQSAEDGGSQ-----------------------------HQQRQLERERVVLLMHETQVLNASDATRLLSLLGRQDSRTLEAFHAFECSKNVPALVETVNIIVNQAPAASASDLVLLQGKEDPGQPLSPLREILDKPAEDLLSTHARDEASKGESSNNXXXXXXXXXXXXXXGVLG-VAKTVLSIVEGMRLDEREAAALRRAIS-----------------------------------CGDAN------VKGALELFKLDSDARELKDTLARVARHVLEREVAKKAEA----------------------------SEEGSCERPASSNDGSAPRTLGPVDQTRNMKMNSAEDLTAEGNESVLQTVLHQLCTMGAMTEAQSSAVMERYIEKDAAVLAALDAYNNKQKHKKHKNQNDMSELVDTLKSLP 3674
+ + V V H + VALY+G++P EL RLL+AA+++ VVGL H+ +VVP+SLAC PQ++ + T+ LLLCE+E+ WD S +V ++L S + + + G + + + E + XXXXXXXXXXXXXXX D XXXXXXXX + AF RRMAG G++ + A + ++G AV A++ A+ QD + LA LLKD AA ++ + +G L A+G++L LR++ + Q A L+ LILV +E V + +AY + + E A SL + T+ N+ AG R L K+ + S G+L EA +L E++ + ++ AA +VY EDG+ AEL DT+AR AR E++R ++ ++ + + + AV D + S A S AG +W GA V G +G ++++A +P + +A PD + HAA E D+++ +++L ++ RL + GG A + + NG T S + R A+R + Q ++LL + ++ EEA CL +PSP G I L+N+ + + LLD ++V+A+ E+ A G + P G A + + D +++ G G R +MEL +L+ + + R+G + L+ IE +PR++AAY +++ +D D L +LV A + DE Q D G+++ + +A G R V+ M ET A+ A LL L +R AF ++ S ++ L++T+ + A A + E +ST A+D + + + G G +++ +L +V+GM LDE E+AALR I+ CG + ++ AL+++ L+ DA +L+DTL R+AR + ++A++ EEG G + + D+T + +L+ +L L +T+ Q+ A++ R++++D +L LDAY + QN + +LVDTL+ +P
Sbjct: 2 DTKLVYVEHGGLAHHVALYSGISPTELSRLLKAAYQLRAQHVVGL----QHMESRVVVPLSLACHTPQVISQGTFGLLLCEKEIDWDARAVSARAGAGEQARQDSLVDAAATLRSRAQAEWTRSSARASAXXXXXFYGNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMRAQEVEVAADDGESEEGXXXXXXXXXXXXXXXAGDDGDEGXXXXXXXXXXRALAGAAAFARRMAGIGLLSARELAAATALVSDGSAVAAAAYAAALEEQDPELLAQLLKD-AAQRQLSREGQLTLAAEGDLLRACAALRRSGALSAAQRAVLRRLILVQSEPVASVQEAYAADGNVVAMMARLERAALSLETDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRDMATSTDDNSPVPGGRAGSAVRRAD-----ALSKIVSDKVSSGVLSIAEAELLVELMSDGHELVQAALEVYAEDGDAAELGDTLARLARYESRRRRLTARLLQSTGAAAAACVQRSAILIXXXXXXXXXXXXXXXXXXXXXXAVTDRSPSEDSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRALSAAGVRDAWGGA---------------VPPGFKALGFKALVWSAVGAGRLAAPAADALCTAYAAGPDAAP---AAAMAHAALE-----GDDDDCLDTLVRVARLLLP------GGARAAAAAAPASAEDMNGVGPLEXXXXXXXXETNGSGSGSGVRAAELVDALRRVMQQCTDVLLAGERITPEEARCLLAPSPKGEALIYASLENYNASRNLENLLDTMTVLARKERELYMAEVAGAADAP------------------------GGADAAIVNGSAARDATHDKKGGDAGSDGGGAAARRAQMELQDLIALLGQAGRLGNAQLIALSQLIEDADPRVMAAYDVYMEIEDADDLADSLVRL------AGAVCGYDGDEQDQTDEDGGESSPTPAAPANGVSGXXXXXXXXXXXXXXTDPYGDGSAVTDXXXXXETAARAGVLRAMFETGAHTAAQAAVLLRQLRTGGARVHAAFDVYDASGDLEDLLDTLGHVARIAGAQN----------------------------EGGMSTAAQDGSMTSGTGEDPEGQQLSTAGSGGGGADGELSRKLLRLVDGMGLDELESAALRLCIAKRDPMIWCVRRRSGAPLTTSGEATLSFMNRVSIAVCGGRHGVLVRVLRAALDVYGLEHDADDLRDTLQRIARATIA-DIAQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEEGE----------------GAYSDEDDDEEERGIDMTPLDSGDLLRKLLDGLAEQQLLTQEQADALLRRWLDRDPVLLGVLDAY---------RQQNSLEDLVDTLRRMP 1288
BLAST of mRNA_F-serratus_M_contig1524.3591.1 vs. uniprot
Match: A0A7S2MSW5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSW5_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.480e-7 Identity = 41/108 (37.96%), Postives = 57/108 (52.78%), Query Frame = 3
Query: 30 AEAQFVRVTHAEQGYFVALYAGLNPQELCRLLQAAFRITPT----VVGLVDKDSHIGQGIVVPISLACRAPQLLGERTYSLLLCEREVSWDRTQASPMVPPISSLGSP 341
A A+ VRVT+ Q +FVAL++G+N +EL L FR+ + GL D QG P+SL C P+ L E +Y+L+L R+V RT P LG+P
Sbjct: 4 ASAKCVRVTYDGQSHFVALFSGVNVEELSSLFAVTFRLGKRGGAMIAGLED-----AQGRSTPLSLVCLYPECLREESYTLVLHARDVY--RTTTGTATKPRRPLGNP 104 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1524.3591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1524.3591.1 >prot_F-serratus_M_contig1524.3591.1 ID=prot_F-serratus_M_contig1524.3591.1|Name=mRNA_F-serratus_M_contig1524.3591.1|organism=Fucus serratus male|type=polypeptide|length=1217bp MAEAQFVRVTHAEQGYFVALYAGLNPQELCRLLQAAFRITPTVVGLVDKDback to top mRNA from alignment at F-serratus_M_contig1524:116442..133527- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1524.3591.1 ID=mRNA_F-serratus_M_contig1524.3591.1|Name=mRNA_F-serratus_M_contig1524.3591.1|organism=Fucus serratus male|type=mRNA|length=17086bp|location=Sequence derived from alignment at F-serratus_M_contig1524:116442..133527- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1524:116442..133527- >mRNA_F-serratus_M_contig1524.3591.1 ID=mRNA_F-serratus_M_contig1524.3591.1|Name=mRNA_F-serratus_M_contig1524.3591.1|organism=Fucus serratus male|type=CDS|length=7302bp|location=Sequence derived from alignment at F-serratus_M_contig1524:116442..133527- (Fucus serratus male)back to top |