mRNA_F-serratus_M_contig152.3579.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig152.3579.1 vs. uniprot
Match: D8LNZ1_ECTSI (PDCD2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ1_ECTSI) HSP 1 Score: 238 bits (606), Expect = 1.060e-68 Identity = 147/291 (50.52%), Postives = 180/291 (61.86%), Query Frame = 3
Query: 612 FPVKSMTFSPEPWGSKDDGIDS-DMEKRIRQYREEEEDRGLVDELDKALSQGRGDGFKSKVSSGGARA-ADAGEKYERTPARAKAVMRFAERVSRSPRQVVRYAYGGEPLWSTSDPPREVVPPCDGCGATRVFEMQLMPALLLQLQVDKFADQETRKGNG------TGSVSDVIGNYTTAGADDGEEHMQGSSSRVQEGSLPRGRHIIGKDPQECGQYQGSD--------IAREDCDKGSEVVPTPTATAVECDRDRFKTWGMEWGVVAVWCCPRSCQASCEEFAVVQLPV 1436
FP K+++F PEPWG++ D DME R+R+YRE+EEDRGLV LD AL G S+ +A A GEKYERTPARAKAVMRFA+RV+RSP+QVVRYAYGGEPLWS SDPPRE +PPC CGATRVFEMQLMPALLLQLQV+ A++ET G +G S I + + S + P+G + E G QG ++ E+ D+G+E PT + E R+R +T GM+WGVVA+W CPRSC SCEE VVQLPV
Sbjct: 247 FPAKTVSFVPEPWGAESSRTDDKDMENRLRRYREQEEDRGLVAALDHALGLKDAGGLSSEHGGKEGKAVASVGEKYERTPARAKAVMRFADRVARSPQQVVRYAYGGEPLWSASDPPREEIPPC-ACGATRVFEMQLMPALLLQLQVNDLAERETGSLEGGSPATFSGLESKKISTLSQVADGHDNNNTLKSITPSAVAVQPKGAAST-RSTDEHGVAQGDGSGVLAGIGVSGEE-DEGNETTMMPTPSVEE--RERLRTLGMDWGVVAIWSCPRSCSISCEECVVVQLPV 532
BLAST of mRNA_F-serratus_M_contig152.3579.1 vs. uniprot
Match: A0A7S4IB63_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IB63_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 4.880e-18 Identity = 77/220 (35.00%), Postives = 91/220 (41.36%), Query Frame = 3
Query: 825 EKYERTPARAKAVMRFAERVSRSPRQVVRYAYGGEPLWS--TSDPPREV-----------------VPPCDGCGATRVFEMQLMPALLLQLQVDKFADQETRKGNGTGSVSDVIGNYTTAGADDGEEHMQGSSSRVQEGSLPRGRHIIGKDPQECGQYQGSDIAREDCDKGSEVVPTPTATAVECDRDRFKTWGMEWGVVAVWCCPRSCQASCEEFAVVQ 1427
EKYER P +A + F ER+ R+PRQVVRYAYGG PLWS T PP + VPPC GCG+ R FEMQL PALLL L VD A + + + +AG +G E GS RG D G E GM WG +AV+CCP SC S E V+Q
Sbjct: 160 EKYERLPPDQRAFLTFTERMRRAPRQVVRYAYGGVPLWSVPTPSPPSKKEKRNRGRKSARRTQFPSVPPCTGCGSERTFEMQLAPALLLALDVDGHA------------LLPTLASSVSAGEGEGREEEGGS----------RG-----------------------VDGGGEG-------------------GMNWGSIAVYCCPLSCDGSRGEALVMQ 315
BLAST of mRNA_F-serratus_M_contig152.3579.1 vs. uniprot
Match: A0A2D4BDN7_PYTIN (PDCD2_C domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDN7_PYTIN) HSP 1 Score: 94.7 bits (234), Expect = 5.550e-18 Identity = 64/155 (41.29%), Postives = 92/155 (59.35%), Query Frame = 3
Query: 612 FPVKSMTFSPEPWGS-KDDGIDSDMEKRIRQY-REEEEDRGL-VDELDKALSQGRGDGFKSKVSSGGARAADAGEKYERTPARAKAVMRFAERVSRSPRQVVRYAYGGEPLWSTSDPPREVVPPCDGCGATRVFEMQLMPALLLQLQVDKFADQE 1067
FP + EP+ K + S + ++QY R+EEED+ V++L + ++ + KS S G+ AA +GE YERTPA+ K MRF +R++R P QV+RY YGGEPLW T P +P C CG R FE+QL P + L+VD+FA ++
Sbjct: 98 FPALFIDVIDEPYEDFKTESDYSHENELLQQYMRQEEEDKSTDVNDLRRIIANAK----KSDGSVSGSAAASSGESYERTPAQQKHFMRFQKRINRCPLQVLRYDYGGEPLWPTPMPRGLKIPRC-ACGEERAFELQLTPTINYFLKVDEFAAKQ 247
BLAST of mRNA_F-serratus_M_contig152.3579.1 vs. uniprot
Match: A0A067CN94_SAPPC (PDCD2_C domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CN94_SAPPC) HSP 1 Score: 89.0 bits (219), Expect = 1.210e-15 Identity = 63/164 (38.41%), Postives = 88/164 (53.66%), Query Frame = 3
Query: 597 SARRRFPVKSMTFSPEPWGSKDDGIDSDMEKRIRQYREEEEDRGL-VDELDKALSQGRGDGFKSKVSSGGARAADAGEKYERTPARAKAVMRFAERVSRSPRQVVRYAYGGEPLWSTSDPPREVVPPCDGCGATRVFEMQLMPALLLQLQVDKFADQETRKGNG 1085
SAR FP S+ EP + + + + EEE++ V L L K+ V + A +++ E YERTP R K +RF +R+ R+P Q +RY YGG PLWS S PP+ VPPC CGA+RVFE+QL+P L V+K+A + +G G
Sbjct: 163 SARPHFPAISLHVEDEPESAGAERYQHETQLLNAYLAEEEKENATEVARLKTILK------AKTDVVASSAGESESVEAYERTPLREKLFLRFQKRMKRAPTQCLRYHYGGNPLWS-SPPPKIDVPPCP-CGASRVFELQLVPTTNYFLNVEKYAHETHTEGAG 318
BLAST of mRNA_F-serratus_M_contig152.3579.1 vs. uniprot
Match: A0A7S3L9L7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L9L7_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 6.000e-14 Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 3
Query: 858 AVMRFAERVSRSPRQVVRYAYGGEPLWSTSDPPREV-----------------VPPCDGCGATRVFEMQLMPALLLQLQVDKFADQ 1064
A+++F++R+ RSPRQV+RYAYGGEPLWS + P + V VPPC CGATRVFE Q++P++L L VDKF Q
Sbjct: 84 ALLKFSDRLKRSPRQVIRYAYGGEPLWSRAPPKQPVKLEKKRGKSPAETNKSQVPPC-ACGATRVFECQILPSVLHVLNVDKFVKQ 168
BLAST of mRNA_F-serratus_M_contig152.3579.1 vs. uniprot
Match: A0A0W8DJ45_PHYNI (Glycine amidinotransferase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DJ45_PHYNI) HSP 1 Score: 79.3 bits (194), Expect = 1.830e-13 Identity = 37/82 (45.12%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 1 PVRIACGIFQAWFGEAPVDLDDLVCRLCGRDLFLVAQVYAPMHFERSLCIFGCNRAACSVHSHGWRVIRTQKLPENCRDTTV 246
P G AW+ E P + + L C CG+ LFLVAQVYAP+ +R+L +FGCN AC+ +S WRV+R Q E+ ++T V
Sbjct: 23 PYVCKAGGTPAWYLEPPSEANGLTCTKCGKGLFLVAQVYAPVETDRTLYVFGCNSVACTENSGSWRVLRDQV--ESTKETPV 102
BLAST of mRNA_F-serratus_M_contig152.3579.1 vs. uniprot
Match: D0MUY6_PHYIT (PDCD2_C domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MUY6_PHYIT) HSP 1 Score: 80.9 bits (198), Expect = 6.740e-13 Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 1 PVRIACGIFQAWFGEAPVDLDDLVCRLCGRDLFLVAQVYAPMHFERSLCIFGCNRAACSVHSHGWRVIRTQKLPENCRDTTV 246
P G AW+ E P + +L C CG+ LFLVAQVYAP+ +R+L +FGCN AC+ ++ WRV+R Q P R+T V
Sbjct: 23 PYVCKAGGTPAWYSEPPSEASNLTCTKCGKGLFLVAQVYAPVETDRTLYVFGCNSMACTENAGSWRVLRDQVKP--VRETPV 102
BLAST of mRNA_F-serratus_M_contig152.3579.1 vs. uniprot
Match: A0A1Z5JKN2_FISSO (Pre-rRNA-processing protein TSR4 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKN2_FISSO) HSP 1 Score: 80.1 bits (196), Expect = 1.700e-12 Identity = 62/153 (40.52%), Postives = 82/153 (53.59%), Query Frame = 3
Query: 666 GIDSDMEKRIRQYREEEEDRGLVDELDKALSQGRGDGFKSKVSSGGARAADAGEKYERTPARAKAVMRFAERVSRSPRQVVRYAYGGEPLWSTS-DPP---------------------REVVPPCDGCGATRVFEMQLMPALLLQLQVDKFA 1058
G D ++K + +Y EEED ++ L RG G SSGG+R GEK ER A +A++ F++R+ RSPRQVVRYAY G PLWS + P RE V P CG+ RVFE+Q++P+LL L+VDK A
Sbjct: 205 GSDDKIQKMLEKYMMEEEDEEILTAL-------RGVGS----SSGGSRG---GEKDERLSAADRAILTFSDRLKRSPRQVVRYAYNGVPLWSIPIESPIEENKHIPQRAKAKKAAAARNREPVIPACRCGSPRVFELQILPSLLHVLEVDKAA 343
BLAST of mRNA_F-serratus_M_contig152.3579.1 vs. uniprot
Match: A0A8K1CFZ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFZ9_PYTOL) HSP 1 Score: 79.7 bits (195), Expect = 2.450e-12 Identity = 43/79 (54.43%), Postives = 50/79 (63.29%), Query Frame = 3
Query: 822 GEKYERTPARAKAVMRFAERVSRSPRQVVRYAYGGEPLWSTSDPPREVVPPCDGCGATRVFEMQLMPALLLQLQVDKFA 1058
GE YERTPA+ K MRF +R+SR P QV+RY YGGEPLW VP C CG R FE QL P + L+VD+FA
Sbjct: 311 GESYERTPAQQKHFMRFQKRISRCPLQVLRYDYGGEPLWPAPPARNLKVPRCP-CGEERAFEFQLTPTINYFLKVDEFA 388
BLAST of mRNA_F-serratus_M_contig152.3579.1 vs. uniprot
Match: W2R9X5_PHYPN (PDCD2_C domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2R9X5_PHYPN) HSP 1 Score: 79.3 bits (194), Expect = 2.540e-12 Identity = 37/82 (45.12%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 1 PVRIACGIFQAWFGEAPVDLDDLVCRLCGRDLFLVAQVYAPMHFERSLCIFGCNRAACSVHSHGWRVIRTQKLPENCRDTTV 246
P G AW+ E P + + L C CG+ LFLVAQVYAP+ +R+L +FGCN AC+ +S WRV+R Q E+ ++T V
Sbjct: 23 PYVCKAGGTPAWYLEPPSEANGLTCTKCGKGLFLVAQVYAPVETDRTLYVFGCNSVACTENSGSWRVLRDQV--ESTKETPV 102 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig152.3579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig152.3579.1 >prot_F-serratus_M_contig152.3579.1 ID=prot_F-serratus_M_contig152.3579.1|Name=mRNA_F-serratus_M_contig152.3579.1|organism=Fucus serratus male|type=polypeptide|length=271bp MTFSPEPWGSKDDGIDSDMEKRIRQYREEEEDRGLVDELDKALSQGRGDGback to top mRNA from alignment at F-serratus_M_contig152:708470..711272- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig152.3579.1 ID=mRNA_F-serratus_M_contig152.3579.1|Name=mRNA_F-serratus_M_contig152.3579.1|organism=Fucus serratus male|type=mRNA|length=2803bp|location=Sequence derived from alignment at F-serratus_M_contig152:708470..711272- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig152:708470..711272- >mRNA_F-serratus_M_contig152.3579.1 ID=mRNA_F-serratus_M_contig152.3579.1|Name=mRNA_F-serratus_M_contig152.3579.1|organism=Fucus serratus male|type=CDS|length=1626bp|location=Sequence derived from alignment at F-serratus_M_contig152:708470..711272- (Fucus serratus male)back to top |